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Статті в журналах з теми "Biomolecular systems"
Miró, Jesús M., and Alfonso Rodríguez-Patón. "Biomolecular Computing Devices in Synthetic Biology." International Journal of Nanotechnology and Molecular Computation 2, no. 2 (April 2010): 47–64. http://dx.doi.org/10.4018/978-1-59904-996-0.ch014.
Повний текст джерелаKatrusiak, Andrzej, Michalina Aniola, Kamil Dziubek, Kinga Ostrowska, and Ewa Patyk. "Biomolecular systems under pressure." Acta Crystallographica Section A Foundations and Advances 70, a1 (August 5, 2014): C1188. http://dx.doi.org/10.1107/s2053273314088111.
Повний текст джерелаNiranjan, Vidya, Purushotham Rao, Akshay Uttarkar, and Jitendra Kumar. "Protocol for the development of coarse-grained structures for macromolecular simulation using GROMACS." PLOS ONE 18, no. 8 (August 3, 2023): e0288264. http://dx.doi.org/10.1371/journal.pone.0288264.
Повний текст джерелаEmenecker, Ryan J., Alex S. Holehouse, and Lucia C. Strader. "Biological Phase Separation and Biomolecular Condensates in Plants." Annual Review of Plant Biology 72, no. 1 (June 17, 2021): 17–46. http://dx.doi.org/10.1146/annurev-arplant-081720-015238.
Повний текст джерелаWang, Li, Coucong Gong, Xinzhu Yuan, and Gang Wei. "Controlling the Self-Assembly of Biomolecules into Functional Nanomaterials through Internal Interactions and External Stimulations: A Review." Nanomaterials 9, no. 2 (February 18, 2019): 285. http://dx.doi.org/10.3390/nano9020285.
Повний текст джерелаSmith, Paul E., and B. Montgomery Pettitt. "Modeling Solvent in Biomolecular Systems." Journal of Physical Chemistry 98, no. 39 (September 1994): 9700–9711. http://dx.doi.org/10.1021/j100090a002.
Повний текст джерелаRhodes, William. "Coferent dynamics in biomolecular systems." Journal of Molecular Liquids 41 (October 1989): 165–80. http://dx.doi.org/10.1016/0167-7322(89)80076-5.
Повний текст джерелаRowe, Rhianon K., and P. Shing Ho. "Relationships between hydrogen bonds and halogen bonds in biological systems." Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials 73, no. 2 (March 29, 2017): 255–64. http://dx.doi.org/10.1107/s2052520617003109.
Повний текст джерелаWang, Yue, Lei Ren, Hongzhen Peng, Linjie Guo, and Lihua Wang. "DNA-Programmed Biomolecular Spatial Pattern Recognition." Chemosensors 11, no. 7 (June 27, 2023): 362. http://dx.doi.org/10.3390/chemosensors11070362.
Повний текст джерелаRen, Pengyu, Jaehun Chun, Dennis G. Thomas, Michael J. Schnieders, Marcelo Marucho, Jiajing Zhang, and Nathan A. Baker. "Biomolecular electrostatics and solvation: a computational perspective." Quarterly Reviews of Biophysics 45, no. 4 (November 2012): 427–91. http://dx.doi.org/10.1017/s003358351200011x.
Повний текст джерелаДисертації з теми "Biomolecular systems"
Brampton, Christopher. "Forces in biomolecular systems." Thesis, University of Nottingham, 2006. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.429077.
Повний текст джерелаShah, Rushina(Rushina Jaidip). "Input-output biomolecular systems." Thesis, Massachusetts Institute of Technology, 2020. https://hdl.handle.net/1721.1/129016.
Повний текст джерелаCataloged from student-submitted PDF of thesis.
Includes bibliographical references (pages 194-206).
The ability of cells to sense and respond to their environment is encoded in biomolecular reaction networks, in which information travels through processes such as production, modification, and removal of biomolecules. These reaction networks can be modeled as input-output systems, where the input, state and output variables are concentrations of the biomolecules involved in these reactions. Tools from non-linear dynamics and control theory can be leveraged to analyze and control these systems. In this thesis, we study two key biomolecular networks. In part 1 of this thesis, we study the input-output behavior of signaling systems, which are responsible for the transmission of information both from outside and from within the cells, and are ubiquitous, playing a role in cell cycle progression, survival, growth, differentiation and apoptosis. A signaling pathway transmits information from an upstream system to downstream systems, ideally in a unidirectional fashion.
A key obstacle to unidirectional transmission is retroactivity, the additional reaction flux that affects a system once its species interact with those of downstream systems. In this work, we identify signaling architectures that can overcome retroactivity, allowing unidirectional transmission of signals. These findings can be used to decompose natural signal transduction networks into modules, and at the same time, they establish a library of devices that can be used in synthetic biology to facilitate modular circuit design. In part 2 of this thesis, we design inputs to trigger a transition of cell-fate from one cell type to another. The process of cell-fate decision-making is often modeled by means of multistable gene regulatory networks, where different stable steady states represent distinct cell phenotypes. In this thesis, we provide theoretical results that guide the selection of inputs that trigger a transition, i.e., reprogram the network, to a desired stable steady state.
Our results depend uniquely on the structure of the network and are independent of specific parameter values. We demonstrate these results by means of several examples, including models of the extended network controlling stem-cell maintenance and differentiation.
by Rushina Shah.
Ph. D.
Ph.D. Massachusetts Institute of Technology, Department of Mechanical Engineering
Xin, W. (Weidong). "Continuum electrostatics of biomolecular systems." Doctoral thesis, University of Oulu, 2008. http://urn.fi/urn:isbn:9789514287602.
Повний текст джерелаJanosi, Lorant. "Multiscale modeling of biomolecular systems." Diss., Columbia, Mo. : University of Missouri-Columbia, 2007. http://hdl.handle.net/10355/4801.
Повний текст джерелаThe entire dissertation/thesis text is included in the research.pdf file; the official abstract appears in the short.pdf file (which also appears in the research.pdf); a non-technical general description, or public abstract, appears in the public.pdf file. Title from title screen of research.pdf file (viewed on February 14, 2008) Vita. Includes bibliographical references.
Desai, Amruta. "Design support for biomolecular systems." Cincinnati, Ohio : University of Cincinnati, 2010. http://rave.ohiolink.edu/etdc/view.cgi?acc_num=ucin1265986863.
Повний текст джерелаAdvisor: Carla Purdy. Title from electronic thesis title page (viewed Apr. 19, 2010). Includes abstract. Keywords: Biological pathways; weighted gate; BMDL; pyrimidine. Includes bibliographical references.
Diez, Stefan, and Jonathon Howard. "Nanotechnological applications of biomolecular motor systems." Saechsische Landesbibliothek- Staats- und Universitaetsbibliothek Dresden, 2008. http://nbn-resolving.de/urn:nbn:de:bsz:14-ds-1223724473713-41365.
Повний текст джерелаRecent advances in understanding how biomolecular motors work have raised the possibility that they might find applications as nanomachines. For example, they could be used as molecule- sized robots that work in molecular factories where small, but intricate structures are made on tiny assembly lines, that construct networks of molecular conductors and transistors for use as electrical circuits, or that continually patrol inside “adaptive” materials and repair them when necessary. Thus biomolecular motors could form the basis of bottom-up approaches for constructing, active structuring and maintenance at the nanometer scale
Dey, Abhishek. "Modeling and identification of biomolecular systems." Thesis, IIT Delhi, 2019. http://eprint.iitd.ac.in:80//handle/2074/8121.
Повний текст джерелаTyka, Michael. "Absolute free energy calculations for biomolecular systems." Thesis, University of Bristol, 2007. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.439666.
Повний текст джерелаShu, Wenmiao. "Biomolecular sensing and actuation using microcantilever systems." Thesis, University of Cambridge, 2007. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.612828.
Повний текст джерелаLickert, Benjamin [Verfasser], and Gerhard [Akademischer Betreuer] Stock. "Data-based Langevin modeling of biomolecular systems." Freiburg : Universität, 2021. http://d-nb.info/1241962669/34.
Повний текст джерелаКниги з теми "Biomolecular systems"
van Gunsteren, Wilfred F., Paul K. Weiner, and Anthony J. Wilkinson, eds. Computer Simulation of Biomolecular Systems. Dordrecht: Springer Netherlands, 1997. http://dx.doi.org/10.1007/978-94-017-1120-3.
Повний текст джерелаGarcía Gómez-Tejedor, Gustavo, and Martina Christina Fuss, eds. Radiation Damage in Biomolecular Systems. Dordrecht: Springer Netherlands, 2012. http://dx.doi.org/10.1007/978-94-007-2564-5.
Повний текст джерелаChristina, Fuss Martina, and SpringerLink (Online service), eds. Radiation Damage in Biomolecular Systems. Dordrecht: Springer Netherlands, 2012.
Знайти повний текст джерелаRizzarelli, E., and T. Theophanides, eds. Chemistry and Properties of Biomolecular Systems. Dordrecht: Springer Netherlands, 1991. http://dx.doi.org/10.1007/978-94-011-3620-4.
Повний текст джерелаRusso, N., J. Anastassopoulou, and G. Barone, eds. Properties and Chemistry of Biomolecular Systems. Dordrecht: Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-011-0822-5.
Повний текст джерелаVasilescu, D., J. Jaz, L. Packer, and B. Pullman, eds. Water and Ions in Biomolecular Systems. Basel: Birkhäuser Basel, 1990. http://dx.doi.org/10.1007/978-3-0348-7253-9.
Повний текст джерелаRyabov, Artem. Stochastic Dynamics and Energetics of Biomolecular Systems. Cham: Springer International Publishing, 2016. http://dx.doi.org/10.1007/978-3-319-27188-0.
Повний текст джерела1938-, Beveridge David L., Jorgensen William L, and New York Academy of Sciences., eds. Computer simulation of chemical and biomolecular systems. New York, N.Y: New York Academy of Sciences, 1986.
Знайти повний текст джерелаRui-Sheng, Wang, and Zhang Xiang-Sun 1943-, eds. Biomolecular networks: Methods and applications in systems biology. Hoboken, N.J: Wiley, 2009.
Знайти повний текст джерелаJ, Wilkinson Anthony, Gunsteren Wilfred F. van, and Weiner Paul K, eds. Computer simulation of biomolecular systems: Theoretical and experimental applications. Dordrecht: Kluwer, 1997.
Знайти повний текст джерелаЧастини книг з теми "Biomolecular systems"
Solov’yov, Ilia A., Andrey V. Korol, and Andrey V. Solov’yov. "Biomolecular Systems." In Multiscale Modeling of Complex Molecular Structure and Dynamics with MBN Explorer, 171–98. Cham: Springer International Publishing, 2017. http://dx.doi.org/10.1007/978-3-319-56087-8_5.
Повний текст джерелаChandran, Harish, Sudhanshu Garg, Nikhil Gopalkrishnan, and John H. Reif. "Biomolecular Computing Systems." In Biomolecular Information Processing, 199–223. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA, 2012. http://dx.doi.org/10.1002/9783527645480.ch11.
Повний текст джерелаVasilescu, D., and H. Kranck. "Noise in Biomolecular Systems." In Modern Bioelectrochemistry, 397–430. Boston, MA: Springer US, 1986. http://dx.doi.org/10.1007/978-1-4613-2105-7_14.
Повний текст джерелаFernández Stigliano, Ariel. "Multitarget Control of Drug Impact: A Therapeutic Imperative in Cancer Systems Biology." In Biomolecular Interfaces, 285–309. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-16850-0_13.
Повний текст джерелаStrack, Guinevere, Heather R. Luckarift, Glenn R. Johnson, and Evgeny Katz. "Information Security Applications Based on Biomolecular Systems." In Biomolecular Information Processing, 103–16. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA, 2012. http://dx.doi.org/10.1002/9783527645480.ch6.
Повний текст джерелаWilson, Ian D., and Jeremy K. Nicholson. "Chapter 12. Metabonomics and Global Systems Biology." In RSC Biomolecular Sciences, 295–316. Cambridge: Royal Society of Chemistry, 2007. http://dx.doi.org/10.1039/9781847558107-00295.
Повний текст джерелаFernández Stigliano, Ariel. "Wrapping Drug Combinations for Therapeutic Editing of Side Effects: Systems Biology Meets Wrapping Technology." In Biomolecular Interfaces, 259–84. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-16850-0_12.
Повний текст джерелаChalikian, Tigran V., and Robert B. Macgregor. "Volumetric Properties of Biomolecular Systems." In Encyclopedia of Biophysics, 1–14. Berlin, Heidelberg: Springer Berlin Heidelberg, 2018. http://dx.doi.org/10.1007/978-3-642-35943-9_10071-1.
Повний текст джерелаCiobanu, Gabriel. "Software Verification of Biomolecular Systems." In Natural Computing Series, 39–57. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004. http://dx.doi.org/10.1007/978-3-642-18734-6_3.
Повний текст джерелаKatz, Evgeny. "Bioelectronic Devices Controlled by Enzyme-Based Information Processing Systems." In Biomolecular Information Processing, 61–80. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA, 2012. http://dx.doi.org/10.1002/9783527645480.ch4.
Повний текст джерелаТези доповідей конференцій з теми "Biomolecular systems"
Arbon, Robert E., Alex J. Jones, Lars A. Bratholm, Tom Mitchell, and David R. Glowacki. "Sonifying Stochastic Walks on Biomolecular Energy Landscapes." In The 24th International Conference on Auditory Display. Arlington, Virginia: The International Community for Auditory Display, 2018. http://dx.doi.org/10.21785/icad2018.032.
Повний текст джерелаNguyen, Mary-Anne, and Andy Sarles. "Microfabrication for Packaged Biomolecular Unit Cells." In ASME 2013 Conference on Smart Materials, Adaptive Structures and Intelligent Systems. American Society of Mechanical Engineers, 2013. http://dx.doi.org/10.1115/smasis2013-3068.
Повний текст джерелаMadden(, Paul A., James Penman, and Ettore Fois. "Ab Initio Molecular Dynamics Applied to Molecular Systems." In Advances in biomolecular simulations. AIP, 1991. http://dx.doi.org/10.1063/1.41316.
Повний текст джерелаvan Gunsteren, W. F. "Computer Simulation of Biomolecular Systems: Overview of Time-Saving Techniques." In Advances in biomolecular simulations. AIP, 1991. http://dx.doi.org/10.1063/1.41334.
Повний текст джерелаHaring Bolivar, Peter G. "Biomolecular Sensing with Integrated THz Systems." In Optical Terahertz Science and Technology. Washington, D.C.: OSA, 2005. http://dx.doi.org/10.1364/otst.2005.wb1.
Повний текст джерелаAizawa, Masuo, T. Niimi, T. Haruyama, and E. Kobatake. "Design of environment-responsive biomolecular systems." In 1996 Symposium on Smart Structures and Materials, edited by Andrew Crowson. SPIE, 1996. http://dx.doi.org/10.1117/12.232133.
Повний текст джерелаFreeman, Eric C., Michael K. Philen, and Donald J. Leo. "Principles of Biomolecular Network Design." In ASME 2013 Conference on Smart Materials, Adaptive Structures and Intelligent Systems. American Society of Mechanical Engineers, 2013. http://dx.doi.org/10.1115/smasis2013-3113.
Повний текст джерелаLiu, Tse-Yen, I.-Shun Wang, Pei-Wen Yen, Shiang-Chi Lin, Kuan-Chou Lin, Jhu-Siang Jheng, Da-Yuan Chang, and Chih-Ting Lin. "CMOS-based biomolecular diagnosis platform." In 2017 IEEE 12th International Conference on Nano/Micro Engineered and Molecular Systems (NEMS). IEEE, 2017. http://dx.doi.org/10.1109/nems.2017.8016982.
Повний текст джерелаJiang, Hua, Marc D. Riedel, and Keshab K. Parhi. "Digital signal processing with biomolecular reactions." In 2010 IEEE Workshop On Signal Processing Systems (SiPS). IEEE, 2010. http://dx.doi.org/10.1109/sips.2010.5624796.
Повний текст джерелаTamba, Masaaki, and Takashi Nakakuki. "Renewable implementation of rational biomolecular systems design." In 2020 59th Annual Conference of the Society of Instrument and Control Engineers of Japan (SICE). IEEE, 2020. http://dx.doi.org/10.23919/sice48898.2020.9240329.
Повний текст джерелаЗвіти організацій з теми "Biomolecular systems"
Beebe, David J. An Advanced Platform for Biomolecular Detection and Analysis Systems. Fort Belvoir, VA: Defense Technical Information Center, February 2005. http://dx.doi.org/10.21236/ada432950.
Повний текст джерелаBachand, George David, and Amanda Carroll-Portillo. Engineering intracellular active transport systems as in vivo biomolecular tools. Office of Scientific and Technical Information (OSTI), November 2006. http://dx.doi.org/10.2172/899371.
Повний текст джерелаClark, Douglas S. Performance-Enhancing Biomolecular Treatment Strategies for Naval Graywater Filtration Systems. Fort Belvoir, VA: Defense Technical Information Center, March 2002. http://dx.doi.org/10.21236/ada399945.
Повний текст джерелаHummer, G., A. E. Garcia, and D. M. Soumpasis. Potential-of-mean-force description of ionic interactions and structural hydration in biomolecular systems. Office of Scientific and Technical Information (OSTI), October 1994. http://dx.doi.org/10.2172/10186924.
Повний текст джерелаMoore, Jeff, Hassan Aref, Ron Adrian, Deborah Leckband, and David J. Beebe. Engineering Solutions for Robust and Efficient Microfluidic Biomolecular Systems: Mixing, Fabrication, Diagnostics, Modeling, Antifouling and Functional Materials. Fort Belvoir, VA: Defense Technical Information Center, September 2002. http://dx.doi.org/10.21236/ada411413.
Повний текст джерелаRoux, B., Y. Luo, and W. Jiang. NAMD - The Engine for Large-Scale Classical MD Simulations of Biomolecular Systems Based on a Polarizable Force Field: ALCF-2 Early Science Program Technical Report. Office of Scientific and Technical Information (OSTI), May 2013. http://dx.doi.org/10.2172/1079771.
Повний текст джерелаRodriguez Muxica, Natalia. Open configuration options Bioinformatics for Researchers in Life Sciences: Tools and Learning Resources. Inter-American Development Bank, February 2022. http://dx.doi.org/10.18235/0003982.
Повний текст джерелаReichert, D. E., and P. J. A. Kenis. Microfluidic Radiometal Labeling Systems for Biomolecules. Office of Scientific and Technical Information (OSTI), December 2011. http://dx.doi.org/10.2172/1032377.
Повний текст джерелаDoktycz, M. J. Dual Manifold System for Arraying Biomolecules. Office of Scientific and Technical Information (OSTI), April 2001. http://dx.doi.org/10.2172/814531.
Повний текст джерелаDoktycz, M. J. CRADA Final Report-Dual Manifold System for Arraying Biomolecules. Office of Scientific and Technical Information (OSTI), May 2001. http://dx.doi.org/10.2172/814372.
Повний текст джерела