Статті в журналах з теми "Virtual ribosome"
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Caulfield, Thomas R., Karen E. Hayes, Yushi Qiu, Mathew Coban, Joon Seok Oh, Amy L. Lane, Takehiko Yoshimitsu, Lori Hazlehurst, John A. Copland, and Han W. Tun. "A Virtual Screening Platform Identifies Chloroethylagelastatin A as a Potential Ribosomal Inhibitor." Biomolecules 10, no. 10 (October 5, 2020): 1407. http://dx.doi.org/10.3390/biom10101407.
Повний текст джерелаBuckley, McKenna E., Audrey R. N. Ndukwe, Pramod C. Nair, Santu Rana, Kathryn E. Fairfull-Smith, and Neha S. Gandhi. "Comparative Assessment of Docking Programs for Docking and Virtual Screening of Ribosomal Oxazolidinone Antibacterial Agents." Antibiotics 12, no. 3 (February 24, 2023): 463. http://dx.doi.org/10.3390/antibiotics12030463.
Повний текст джерелаJensen, Travis L., William F. Hooper, Sami R. Cherikh, and Johannes B. Goll. "RP-REP Ribosomal Profiling Reports: an open-source cloud-enabled framework for reproducible ribosomal profiling data processing, analysis, and result reporting." F1000Research 10 (February 24, 2021): 143. http://dx.doi.org/10.12688/f1000research.40668.1.
Повний текст джерелаPan, Peipei, and Frank van Breukelen. "Preference of IRES-mediated initiation of translation during hibernation in golden-mantled ground squirrels, Spermophilus lateralis." American Journal of Physiology-Regulatory, Integrative and Comparative Physiology 301, no. 2 (August 2011): R370—R377. http://dx.doi.org/10.1152/ajpregu.00748.2010.
Повний текст джерелаWernersson, R. "Virtual Ribosome--a comprehensive DNA translation tool with support for integration of sequence feature annotation." Nucleic Acids Research 34, Web Server (July 1, 2006): W385—W388. http://dx.doi.org/10.1093/nar/gkl252.
Повний текст джерелаMartín-Villamil, María, Isaías Sanmartín, Ángela Moreno, and José Gallego. "Pharmacophore-Based Discovery of Viral RNA Conformational Modulators." Pharmaceuticals 15, no. 6 (June 14, 2022): 748. http://dx.doi.org/10.3390/ph15060748.
Повний текст джерелаKumar, RBarani, and MXavier Suresh. "A computational perspective of molecular interactions through virtual screening, pharmacokinetic and dynamic prediction on ribosome toxin A chain and inhibitors of Ricinus communis." Pharmacognosy Research 4, no. 1 (2012): 2. http://dx.doi.org/10.4103/0974-8490.91027.
Повний текст джерелаTam, Benjamin, Dror Sherf, Shira Cohen, Sarah Adi Eisdorfer, Moshe Perez, Adam Soffer, Dan Vilenchik, Sabine Ruth Akabayov, Gerhard Wagner, and Barak Akabayov. "Discovery of small-molecule inhibitors targeting the ribosomal peptidyl transferase center (PTC) of M. tuberculosis." Chemical Science 10, no. 38 (2019): 8764–67. http://dx.doi.org/10.1039/c9sc02520k.
Повний текст джерелаKumari, Sweta, Arumugam Mohana Priya, Sajitha Lulu, and Mohammad Tauqueer. "Molecular modeling, simulation and virtual screening of ribosomal phosphoprotein P1 from Plasmodium falciparum." Journal of Theoretical Biology 343 (February 2014): 113–19. http://dx.doi.org/10.1016/j.jtbi.2013.10.014.
Повний текст джерелаTurgeon, Zachari, René Jørgensen, Danielle Visschedyk, Patrick R. Edwards, Sarah Legree, Caroline McGregor, Robert J. Fieldhouse, Dev Mangroo, Matthieu Schapira, and A. Rod Merrill. "Newly Discovered and Characterized Antivirulence Compounds Inhibit Bacterial Mono-ADP-Ribosyltransferase Toxins." Antimicrobial Agents and Chemotherapy 55, no. 3 (December 6, 2010): 983–91. http://dx.doi.org/10.1128/aac.01164-10.
Повний текст джерелаMaia, Mayara dos Santos, Francisco Jaime Bezerra Mendonça-Junior, Gabriela Cristina Soares Rodrigues, Adriano Soares da Silva, Niara Isis Pereira de Oliveira, Pablo Rayff da Silva, Cícero Francisco Bezerra Felipe, et al. "Virtual Screening of Different Subclasses of Lignans with Anticancer Potential and Based on Genetic Profile." Molecules 28, no. 16 (August 11, 2023): 6011. http://dx.doi.org/10.3390/molecules28166011.
Повний текст джерелаAl-Sanea, Mohammad M., Garri Chilingaryan, Narek Abelyan, Michael Mamikonyan, Hayk Gasparyan, Sargis Hovhannisyan, Abdelrahman Hamdi, Ahmed R. Ali, Samy Selim, and Ahmed A. B. Mohamed. "Combination of ligand and structure based virtual screening approaches for the discovery of potential PARP1 inhibitors." PLOS ONE 17, no. 9 (September 12, 2022): e0272065. http://dx.doi.org/10.1371/journal.pone.0272065.
Повний текст джерелаAlvarado, Pablo, and Jose L. Manjón. "Selection of Enzymes for Terminal Restriction Fragment Length Polymorphism Analysis of Fungal Internally Transcribed Spacer Sequences." Applied and Environmental Microbiology 75, no. 14 (May 22, 2009): 4747–52. http://dx.doi.org/10.1128/aem.00568-09.
Повний текст джерелаKhalil, Mohammad Ibrahim. "Identification of Cladosporium sp. Fungi by in- silico RFLP-PCR." Baghdad Science Journal 17, no. 1(Suppl.) (March 18, 2020): 0220. http://dx.doi.org/10.21123/bsj.2020.17.1(suppl.).0220.
Повний текст джерелаPark, So-Jung, Yang-Gyun Kim, and Hyun-Ju Park. "Identification of RNA Pseudoknot-Binding Ligand That Inhibits the −1 Ribosomal Frameshifting of SARS-Coronavirus by Structure-Based Virtual Screening." Journal of the American Chemical Society 133, no. 26 (July 6, 2011): 10094–100. http://dx.doi.org/10.1021/ja1098325.
Повний текст джерелаPark, So-Jung, Yang-Gyun Kim, and Hyun-Ju Park. "Identification of RNA Pseudoknot-Binding Ligand That Inhibits the −1 Ribosomal Frameshifting of SARS-Coronavirus by Structure-Based Virtual Screening." Journal of the American Chemical Society 133, no. 35 (September 7, 2011): 14150. http://dx.doi.org/10.1021/ja206172p.
Повний текст джерелаLee, I. M., K. D. Bottner-Parker, Y. Zhao, A. Bertaccini, and R. E. Davis. "Differentiation and classification of phytoplasmas in the pigeon pea witches’-broom group (16SrIX): an update based on multiple gene sequence analysis." International Journal of Systematic and Evolutionary Microbiology 62, Pt_9 (September 1, 2012): 2279–85. http://dx.doi.org/10.1099/ijs.0.038273-0.
Повний текст джерелаAzeem, Muhammad, Ghulam Mustafa, and Hafiza S. Mahrosh. "Virtual screening of phytochemicals by targeting multiple proteins of severe acute respiratory syndrome coronavirus 2: Molecular docking and molecular dynamics simulation studies." International Journal of Immunopathology and Pharmacology 36 (January 2022): 039463202211427. http://dx.doi.org/10.1177/03946320221142793.
Повний текст джерелаRyu, Hwani, Hye-Ran Seo, Hyo Jeong Kim, and Jiyeon Ahn. "Abstract 521: Discovery of novel TNKS inhibitors through structure-based virtual screening." Cancer Research 83, no. 7_Supplement (April 4, 2023): 521. http://dx.doi.org/10.1158/1538-7445.am2023-521.
Повний текст джерелаZhao, Yue, Rui-fang Chen, Zhen-Ke Deng, Liu-Xia Zhang, Yan Cheng, Alex F. Chen, and Dong-Sheng Cao. "Discovery of novel p90 ribosomal S6 kinase 2 inhibitors for potential cancer treatment through ligand-based and structure-based virtual screening methods." Chemometrics and Intelligent Laboratory Systems 217 (October 2021): 104402. http://dx.doi.org/10.1016/j.chemolab.2021.104402.
Повний текст джерелаLi, Shiliang, Yi Zhou, Weiqiang Lu, Ye Zhong, Wenlong Song, Kangdong Liu, Jin Huang, et al. "Identification of Inhibitors against p90 Ribosomal S6 Kinase 2 (RSK2) through Structure-Based Virtual Screening with the Inhibitor-Constrained Refined Homology Model." Journal of Chemical Information and Modeling 51, no. 11 (October 21, 2011): 2939–47. http://dx.doi.org/10.1021/ci2002445.
Повний текст джерелаKumari, Sweta, Arumugam MohanaPriya, Sajitha Lulu, and Mohammad Tauqueer. "Corrigendum to “Molecular modeling, simulation and virtual screening of ribosomal phosphoprotein P1 from Plasmodium falciparum” [J. Theor. Biol. 343 (2014) 113–119]." Journal of Theoretical Biology 354 (August 2014): 146. http://dx.doi.org/10.1016/j.jtbi.2014.04.001.
Повний текст джерелаSaks, Ülle, John Davison, Maarja Öpik, Martti Vasar, Mari Moora, and Martin Zobel. "Root-colonizing and soil-borne communities of arbuscular mycorrhizal fungi in a temperate forest understorey." Botany 92, no. 4 (April 2014): 277–85. http://dx.doi.org/10.1139/cjb-2013-0058.
Повний текст джерелаGaafar, Yahya Z. A., Marcel Westenberg, Marleen Botermans, Krizbai László, Kris De Jonghe, Yoika Foucart, Luca Ferretti, et al. "Interlaboratory Comparison Study on Ribodepleted Total RNA High-Throughput Sequencing for Plant Virus Diagnostics and Bioinformatic Competence." Pathogens 10, no. 9 (September 12, 2021): 1174. http://dx.doi.org/10.3390/pathogens10091174.
Повний текст джерелаZhou, Yunjiang, Shi Tang, Tingting Chen, and Miao-Miao Niu. "Structure-Based Pharmacophore Modeling, Virtual Screening, Molecular Docking and Biological Evaluation for Identification of Potential Poly (ADP-Ribose) Polymerase-1 (PARP-1) Inhibitors." Molecules 24, no. 23 (November 22, 2019): 4258. http://dx.doi.org/10.3390/molecules24234258.
Повний текст джерелаVirdi, Rajdeep S., Robert V. Bavisotto, Nicholas C. Hopper, Nemanja Vuksanovic, Trevor R. Melkonian, Nicholas R. Silvaggi, and David N. Frick. "Discovery of Drug-Like Ligands for the Mac1 Domain of SARS-CoV-2 Nsp3." SLAS DISCOVERY: Advancing the Science of Drug Discovery 25, no. 10 (September 28, 2020): 1162–70. http://dx.doi.org/10.1177/2472555220960428.
Повний текст джерелаHaitham Al-Madhagi and Hisham Al-Ward. "New Inhibitors of Glucose-6-Phosphate Dehydrogenase Discovered by Molecular Docking." East Asian Journal of Multidisciplinary Research 1, no. 9 (October 29, 2022): 1793–800. http://dx.doi.org/10.55927/eajmr.v1i9.1191.
Повний текст джерелаPatel, Dhrumi C., Katherine R. Hausman, Muhammad Arba, Annie Tran, Phillip M. Lakernick, and Chun Wu. "Novel inhibitors to ADP ribose phosphatase of SARS-CoV-2 identified by structure-based high throughput virtual screening and molecular dynamics simulations." Computers in Biology and Medicine 140 (January 2022): 105084. http://dx.doi.org/10.1016/j.compbiomed.2021.105084.
Повний текст джерелаFrederiks, Wilma M., Intan P. E. D. Kümmerlin, Klazina S. Bosch, Heleen Vreeling-Sindelárová, Ard Jonker, and Cornelis J. F. Van Noorden. "NADPH Production by the Pentose Phosphate Pathway in the Zona Fasciculata of Rat Adrenal Gland." Journal of Histochemistry & Cytochemistry 55, no. 9 (May 3, 2007): 975–80. http://dx.doi.org/10.1369/jhc.7a7222.2007.
Повний текст джерелаGarcia-Moran, Emilio, Marta Hernández, David Abad, and José M. Eiros. "Putative Secondary Structure at 5’UTR as a Potential Antiviral Target against SARS-CoV-2." Revista Española de Quimioterapia 35, no. 2 (December 15, 2021): 204–12. http://dx.doi.org/10.37201/req/153.2021.
Повний текст джерелаHeliot, Laurent, Hervé Kaplan, Laurent Lucas, Christophe Klein, Adrien Beorchia, Martine Doco-Fenzy, Monique Menager, Marc Thiry, Marie-Françoise O’Donohue, and Dominique Ploton. "Electron Tomography of Metaphase Nucleolar Organizer Regions: Evidence for a Twisted-Loop Organization." Molecular Biology of the Cell 8, no. 11 (November 1997): 2199–216. http://dx.doi.org/10.1091/mbc.8.11.2199.
Повний текст джерелаŠeruga Musić, M., D. Škorić, I. Haluška, I. Križanac, J. Plavec, and I. Mikec. "First Report of Flavescence Dorée-Related Phytoplasma Affecting Grapevines in Croatia." Plant Disease 95, no. 3 (March 2011): 353. http://dx.doi.org/10.1094/pdis-09-10-0664.
Повний текст джерелаS. Pai, K. Usha, Yadav D. Bodke, Suman Manandhar, and K. Sreedhara Ranganath Pai. "in silico-Based Virtual Screening and Molecular Docking Analysis of Phytochemicals obtained from Methanolic Extract of Cleome viscosa Linn. by GC-MS Method for its Anticancer Activity." Asian Journal of Chemistry 33, no. 12 (2021): 2943–52. http://dx.doi.org/10.14233/ajchem.2021.23384.
Повний текст джерелаZheng, Lufeng, Ren Ren, Xiaolian Sun, Yunting Zou, Yiru Shi, Bin Di, and Miao-Miao Niu. "Discovery of a Dual Tubulin and Poly(ADP-Ribose) Polymerase-1 Inhibitor by Structure-Based Pharmacophore Modeling, Virtual Screening, Molecular Docking, and Biological Evaluation." Journal of Medicinal Chemistry 64, no. 21 (October 21, 2021): 15702–15. http://dx.doi.org/10.1021/acs.jmedchem.1c00932.
Повний текст джерелаHaug, Ingeborg, Sabrina Setaro, and Juan Pablo Suárez. "Global AM fungi are dominating mycorrhizal communities in a tropical premontane dry forest in Laipuna, South Ecuador." Mycological Progress 20, no. 6 (June 2021): 837–45. http://dx.doi.org/10.1007/s11557-021-01699-4.
Повний текст джерелаMorales, Paula, Natalie Curtis, Sandra Zárate, Agatha Bastida, and Victor Bolanos-Garcia. "Interfering with mRNA Methylation by the 2′O-Methyltransferase (NSP16) from SARS-CoV-2 to Tackle the COVID-19 Disease." Catalysts 10, no. 9 (September 5, 2020): 1023. http://dx.doi.org/10.3390/catal10091023.
Повний текст джерелаUsta, Mustafa, Abdullah Güller, and Hikmet Murat Sipahioğlu. "First report of 'Candidatus Phytoplasma trifolii' associated with leaf reddening and upright growth in pears (Pyrus communis L.)." Plant Protection Science 57, No. 3 (June 10, 2021): 188–95. http://dx.doi.org/10.17221/163/2020-pps.
Повний текст джерелаDoronina, Liliya, Olga Reising, and Jürgen Schmitz. "Gene Conversion amongst Alu SINE Elements." Genes 12, no. 6 (June 11, 2021): 905. http://dx.doi.org/10.3390/genes12060905.
Повний текст джерелаLiao, Pei-Qing, Yuh-Kun Chen, Helen Mae Mejia, Yuan-Yu Chien, Ya-Chien Lee, Choon-Meng Tan, Yi-Ching Chiu, and Jun-Yi Yang. "Detection, Identification, and Molecular Characterization of a 16SrII-V Subgroup Phytoplasma Associated with Nicotiana plumbaginifolia." Plant Disease 106, no. 3 (March 1, 2022): 805–9. http://dx.doi.org/10.1094/pdis-09-21-1968-sc.
Повний текст джерелаDebnath, Pradip, Bimal Debnath, Samhita Bhaumik, and Sudhan Debnath. "In Silico Identification of Potential Inhibitors of ADP‐Ribose Phosphatase of SARS‐CoV‐2 nsP3 by Combining E‐Pharmacophore‐ and Receptor‐Based Virtual Screening of Database." ChemistrySelect 5, no. 30 (August 11, 2020): 9388–98. http://dx.doi.org/10.1002/slct.202001419.
Повний текст джерелаEncinar, José Antonio, and Javier A. Menendez. "Potential Drugs Targeting Early Innate Immune Evasion of SARS-Coronavirus 2 via 2’-O-Methylation of Viral RNA." Viruses 12, no. 5 (May 10, 2020): 525. http://dx.doi.org/10.3390/v12050525.
Повний текст джерелаValiunas, Deividas, Rasa Jomantiene та Robert Edward Davis. "Evaluation of the DNA-dependent RNA polymerase β-subunit gene (rpoB) for phytoplasma classification and phylogeny". International Journal of Systematic and Evolutionary Microbiology 63, Pt_10 (1 жовтня 2013): 3904–14. http://dx.doi.org/10.1099/ijs.0.051912-0.
Повний текст джерелаKadi, Roqayah H., Khadijah A. Altammar, Mohamed M. Hassan, Abdullah F. Shater, Fayez M. Saleh, Hattan Gattan, Bassam M. Al-ahmadi, Qwait AlGabbani, and Zuhair M. Mohammedsaleh. "Potential Therapeutic Candidates against Chlamydia pneumonia Discovered and Developed In Silico Using Core Proteomics and Molecular Docking and Simulation-Based Approaches." International Journal of Environmental Research and Public Health 19, no. 12 (June 15, 2022): 7306. http://dx.doi.org/10.3390/ijerph19127306.
Повний текст джерелаManzoor, Ammara, Saira Amir, Farzana Gul, Muhammad Abubakar Sidique, Masood ur Rehman Kayani, Syed Shujaat Ali Zaidi, Sundus Javed, Syed Tahir Abbas Shah, and Arshan Nasir. "Characterization of the Gastrointestinal and Reproductive Tract Microbiota in Fertile and Infertile Pakistani Couples." Biology 11, no. 1 (December 28, 2021): 40. http://dx.doi.org/10.3390/biology11010040.
Повний текст джерелаYang, Zhi-Hui, Ji-Xiang Huang, and Yi-Jian Yao. "Autoscreening of Restriction Endonucleases for PCR-Restriction Fragment Length Polymorphism Identification of Fungal Species, with Pleurotus spp. as an Example." Applied and Environmental Microbiology 73, no. 24 (October 26, 2007): 7947–58. http://dx.doi.org/10.1128/aem.00842-07.
Повний текст джерелаKoendjbiharie, Jeroen G., Shuen Hon, Martin Pabst, Robert Hooftman, David M. Stevenson, Jingxuan Cui, Daniel Amador-Noguez, Lee R. Lynd, Daniel G. Olson, and Richard van Kranenburg. "The pentose phosphate pathway of cellulolytic clostridia relies on 6-phosphofructokinase instead of transaldolase." Journal of Biological Chemistry 295, no. 7 (December 22, 2019): 1867–78. http://dx.doi.org/10.1074/jbc.ra119.011239.
Повний текст джерелаWei, Wei, Valeria Trivellone, Christopher H. Dietrich, Yan Zhao, Kristi D. Bottner-Parker, and Algirdas Ivanauskas. "Identification of Phytoplasmas Representing Multiple New Genetic Lineages from Phloem-Feeding Leafhoppers Highlights the Diversity of Phytoplasmas and Their Potential Vectors." Pathogens 10, no. 3 (March 16, 2021): 352. http://dx.doi.org/10.3390/pathogens10030352.
Повний текст джерелаAftab, Fareesa, Alice Rodriguez-Fuguet, Luis Silva, Ikei S. Kobayashi, Jiao Sun, Katerina Politi, Elena Levantini, Wei Zhang, Susumu S. Kobayashi, and Wen Cai Zhang. "Abstract 451: AICAR targets oncogenic signaling pathways of MUC1-CT." Cancer Research 83, no. 7_Supplement (April 4, 2023): 451. http://dx.doi.org/10.1158/1538-7445.am2023-451.
Повний текст джерелаAlmeida, Karen H., Lisbeth Avalos-Irving, Steven Berardinelli, Kristen Chauvin, and Silvia Yanez. "Novel carbon skeletons activate human NicotinAMide Phosphoribosyl Transferase (NAMPT) enzyme in biochemical assay." PLOS ONE 18, no. 3 (March 30, 2023): e0283428. http://dx.doi.org/10.1371/journal.pone.0283428.
Повний текст джерелаDutly, Fabrizio, and Martin Altwegg. "Whipple's Disease and “Tropheryma whippelii”." Clinical Microbiology Reviews 14, no. 3 (July 1, 2001): 561–83. http://dx.doi.org/10.1128/cmr.14.3.561-583.2001.
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