Статті в журналах з теми "Very high throughput sequencing"
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Bray, Paul F., Paolo M. Fortina, Srikanth Nagalla, Kathleen Delgrosso, Adam Ertel, Isidore Rigoutsos, and Steven E. McKenzie. "High-Throughput Sequencing of the Human Platelet Transcriptome." Blood 116, no. 21 (November 19, 2010): 481. http://dx.doi.org/10.1182/blood.v116.21.481.481.
Hoffman, Joseph I., Fraser Simpson, Patrice David, Jolianne M. Rijks, Thijs Kuiken, Michael A. S. Thorne, Robert C. Lacy, and Kanchon K. Dasmahapatra. "High-throughput sequencing reveals inbreeding depression in a natural population." Proceedings of the National Academy of Sciences 111, no. 10 (February 28, 2014): 3775–80. http://dx.doi.org/10.1073/pnas.1318945111.
Chen, Yanwu, Bin Wu, Cheng Zhang, Zhiqi Fan, Ying Chen, Bingmu Xin, and Qiong Xie. "Current Progression: Application of High-Throughput Sequencing Technique in Space Microbiology." BioMed Research International 2020 (June 22, 2020): 1–13. http://dx.doi.org/10.1155/2020/4094191.
Drees, Alissa, and Markus Fischer. "High-Throughput Selection and Characterisation of Aptamers on Optical Next-Generation Sequencers." International Journal of Molecular Sciences 22, no. 17 (August 25, 2021): 9202. http://dx.doi.org/10.3390/ijms22179202.
Zheng, Huiquan, Dehuo Hu, Ruping Wei, Shu Yan, and Runhui Wang. "Chinese Fir Breeding in the High-Throughput Sequencing Era: Insights from SNPs." Forests 10, no. 8 (August 12, 2019): 681. http://dx.doi.org/10.3390/f10080681.
Bao, Ergude, Fei Xie, Changjin Song, and Dandan Song. "FLAS: fast and high-throughput algorithm for PacBio long-read self-correction." Bioinformatics 35, no. 20 (March 21, 2019): 3953–60. http://dx.doi.org/10.1093/bioinformatics/btz206.
Bokulich, Nicholas A., and David A. Mills. "Improved Selection of Internal Transcribed Spacer-Specific Primers Enables Quantitative, Ultra-High-Throughput Profiling of Fungal Communities." Applied and Environmental Microbiology 79, no. 8 (February 1, 2013): 2519–26. http://dx.doi.org/10.1128/aem.03870-12.
Christoff, Ana P., Aline FR Sereia, Camila Hernandes, and Luiz FV de Oliveira. "Uncovering the hidden microbiota in hospital and built environments: New approaches and solutions." Experimental Biology and Medicine 244, no. 6 (January 7, 2019): 534–42. http://dx.doi.org/10.1177/1535370218821857.
Schorderet, Daniel F., Alexandra Iouranova, Tatiana Favez, Leila Tiab, and Pascal Escher. "IROme, a New High-Throughput Molecular Tool for the Diagnosis of Inherited Retinal Dystrophies." BioMed Research International 2013 (2013): 1–9. http://dx.doi.org/10.1155/2013/198089.
Zhao, Lili, Hongbo Li, Zhenbin Liu, Liangbin Hu, Dan Xu, Xiaolin Zhu, and Haizhen Mo. "Quality Changes and Fungal Microbiota Dynamics in Stored Jujube Fruits: Insights from High-Throughput Sequencing for Food Preservation." Foods 13, no. 10 (May 10, 2024): 1473. http://dx.doi.org/10.3390/foods13101473.
Robin, Ferrari, Sakuntala Ale, Aysha Patel, Mikel Valgañón, Hui En Foong, Mary Alikian, Kikkeri Naresh, et al. "Targeted High-Throughput Sequencing For The Detection Of Mutations Associated With Myeloproliferative Neoplasms." Blood 122, no. 21 (November 15, 2013): 1613. http://dx.doi.org/10.1182/blood.v122.21.1613.1613.
Li, Jing, Bertrand Llorente, Gianni Liti, and Jia-Xing Yue. "RecombineX: A generalized computational framework for automatic high-throughput gamete genotyping and tetrad-based recombination analysis." PLOS Genetics 18, no. 5 (May 9, 2022): e1010047. http://dx.doi.org/10.1371/journal.pgen.1010047.
Correia, Damien, Olivia Doppelt-Azeroual, Jean-Baptiste Denis, Mathias Vandenbogaert, and Valérie Caro. "MetaGenSense : A web application for analysis and visualization of high throughput sequencing metagenomic data." F1000Research 4 (April 2, 2015): 86. http://dx.doi.org/10.12688/f1000research.6139.1.
Correia, Damien, Olivia Doppelt-Azeroual, Jean-Baptiste Denis, Mathias Vandenbogaert, and Valérie Caro. "MetaGenSense: A web-application for analysis and exploration of high throughput sequencing metagenomic data." F1000Research 4 (August 22, 2016): 86. http://dx.doi.org/10.12688/f1000research.6139.2.
Correia, Damien, Olivia Doppelt-Azeroual, Jean-Baptiste Denis, Mathias Vandenbogaert, and Valérie Caro. "MetaGenSense: A web-application for analysis and exploration of high throughput sequencing metagenomic data." F1000Research 4 (December 1, 2016): 86. http://dx.doi.org/10.12688/f1000research.6139.3.
da Cunha, Bernardo Ribeiro, Paulo Zoio, Luís P. Fonseca, and Cecília R. C. Calado. "Technologies for High-Throughput Identification of Antibiotic Mechanism of Action." Antibiotics 10, no. 5 (May 12, 2021): 565. http://dx.doi.org/10.3390/antibiotics10050565.
Connon, Stephanie A., and Stephen J. Giovannoni. "High-Throughput Methods for Culturing Microorganisms in Very-Low-Nutrient Media Yield Diverse New Marine Isolates." Applied and Environmental Microbiology 68, no. 8 (August 2002): 3878–85. http://dx.doi.org/10.1128/aem.68.8.3878-3885.2002.
Hannan, Patrick, Mark Nicol, and Maia Lesosky. "A review of common methods used in the analysis of human microbiome sequencing data." F1000Research 13 (April 23, 2024): 369. http://dx.doi.org/10.12688/f1000research.110605.1.
Isom, S. C., J. R. Stevens, R. Li, L. D. Spate, W. G. Spollen, and R. S. Prather. "143 TRANSCRIPTIONAL PROFILING BY HIGH-THROUGHPUT SEQUENCING OF PORCINE PRE- AND PERI-IMPLANTATION EMBRYOS." Reproduction, Fertility and Development 24, no. 1 (2012): 184. http://dx.doi.org/10.1071/rdv24n1ab143.
Päll, Taavi, Hannes Luidalepp, Tanel Tenson, and Ülo Maiväli. "A field-wide assessment of differential expression profiling by high-throughput sequencing reveals widespread bias." PLOS Biology 21, no. 3 (March 2, 2023): e3002007. http://dx.doi.org/10.1371/journal.pbio.3002007.
Al Rwahnih, Maher, Adib Rowhani, Nathaniel Westrick, Kristian Stevens, Alfredo Diaz-Lara, Florent P. Trouillas, John Preece, Craig Kallsen, Kristen Farrar, and Deborah Golino. "Discovery of Viruses and Virus-Like Pathogens in Pistachio using High-Throughput Sequencing." Plant Disease 102, no. 7 (July 2018): 1419–25. http://dx.doi.org/10.1094/pdis-12-17-1988-re.
Ferdous, Tahsin, and Mohammad Ohid Ullah. "An Overview of RNA-seq Data Analysis." Journal of Biology and Life Science 8, no. 2 (August 2, 2017): 57. http://dx.doi.org/10.5296/jbls.v8i2.11255.
Gao, Bingmiao, Chao Peng, Yabing Zhu, Yuhui Sun, Tian Zhao, Yu Huang, and Qiong Shi. "High Throughput Identification of Novel Conotoxins from the Vermivorous Oak Cone Snail (Conus quercinus) by Transcriptome Sequencing." International Journal of Molecular Sciences 19, no. 12 (December 5, 2018): 3901. http://dx.doi.org/10.3390/ijms19123901.
Emerson, Ryan, James Matthew, Harlan Robins, and Joseph Leventhal. "Defining the alloreactive T cell repertoire using high-throughput sequencing of mixed lymphocyte culture (TRAN3P.884)." Journal of Immunology 192, no. 1_Supplement (May 1, 2014): 202.23. http://dx.doi.org/10.4049/jimmunol.192.supp.202.23.
Smith, S., T. Joss, and A. Stow. "Successful development of microsatellite markers in a challenging species: the horizontal borer Austroplatypus incompertus (Coleoptera: Curculionidae)." Bulletin of Entomological Research 101, no. 5 (April 11, 2011): 551–55. http://dx.doi.org/10.1017/s0007485311000137.
Guzzon, Raffaele, Elena Franciosi, and Annita Toffanin. "Investigation by High-Throughput Sequencing Methods of Microbiota Dynamics in Spontaneous Fermentation of Abruzzo (South Italy) Wines." Agronomy 12, no. 12 (December 7, 2022): 3104. http://dx.doi.org/10.3390/agronomy12123104.
Yang, Hui, Guillermo Garcia-Manero, Guillermo Montalban-Bravo, Kelly S. Chien, Awdesh Kalia, Zhenya Tang, Yue Wei, et al. "High-Throughput Characterization of Cytogenomic Heterogeneity of MDS Using High-Resolution Optical Genome Mapping." Blood 138, Supplement 1 (November 5, 2021): 105. http://dx.doi.org/10.1182/blood-2021-154005.
Gaafar, Yahya Z. A., Marcel Westenberg, Marleen Botermans, Krizbai László, Kris De Jonghe, Yoika Foucart, Luca Ferretti, et al. "Interlaboratory Comparison Study on Ribodepleted Total RNA High-Throughput Sequencing for Plant Virus Diagnostics and Bioinformatic Competence." Pathogens 10, no. 9 (September 12, 2021): 1174. http://dx.doi.org/10.3390/pathogens10091174.
Fafián-Labora, Juan A., Miriam Morente-López, Fco Javier de Toro, and María C. Arufe. "High-Throughput Screen Detects Calcium Signaling Dysfunction in Hutchinson-Gilford Progeria Syndrome." International Journal of Molecular Sciences 22, no. 14 (July 7, 2021): 7327. http://dx.doi.org/10.3390/ijms22147327.
Ibaba, Jacques Davy, and Augustine Gubba. "High-Throughput Sequencing Application in the Diagnosis and Discovery of Plant-Infecting Viruses in Africa, A Decade Later." Plants 9, no. 10 (October 16, 2020): 1376. http://dx.doi.org/10.3390/plants9101376.
Massart, Sebastien, Michela Chiumenti, Kris De Jonghe, Rachel Glover, Annelies Haegeman, Igor Koloniuk, Petr Komínek, et al. "Virus Detection by High-Throughput Sequencing of Small RNAs: Large-Scale Performance Testing of Sequence Analysis Strategies." Phytopathology® 109, no. 3 (March 2019): 488–97. http://dx.doi.org/10.1094/phyto-02-18-0067-r.
Zhou, Shiguo, Wen Deng, Thomas S. Anantharaman, Alex Lim, Eileen T. Dimalanta, Jun Wang, Tian Wu, et al. "A Whole-Genome Shotgun Optical Map of Yersinia pestis Strain KIM." Applied and Environmental Microbiology 68, no. 12 (December 2002): 6321–31. http://dx.doi.org/10.1128/aem.68.12.6321-6331.2002.
O'Hara, Andrea, Michael Stephens, Ilaria DeVito, Laure Turner, Christopher Mozdzierz, Haythem Latif, and Ginger Zhou. "Abstract LB130: High-throughput RNA sequencing directly from cell lysates enables reproducible phenotypic profiling for assessing novel compounds and treatments in cancer research." Cancer Research 82, no. 12_Supplement (June 15, 2022): LB130. http://dx.doi.org/10.1158/1538-7445.am2022-lb130.
OZER, HATICE GULCIN, YI-WEN HUANG, JIEJUN WU, JEFFREY D. PARVIN, TIM HUI-MING HUANG, and KUN HUANG. "COMPARING MULTIPLE ChIP-SEQUENCING EXPERIMENTS." Journal of Bioinformatics and Computational Biology 09, no. 02 (April 2011): 269–82. http://dx.doi.org/10.1142/s0219720011005483.
Sun, Beili, Dongrui Zhou, Jing Tu, and Zuhong Lu. "Evaluation of the Bacterial Diversity in the Human Tongue Coating Based on Genus-Specific Primers for 16S rRNA Sequencing." BioMed Research International 2017 (2017): 1–12. http://dx.doi.org/10.1155/2017/8184160.
Vardi, Anna, Evangelia Stalika, Maria Karypidou, Lesley-Ann Sutton, Vasilis Bikos, Achilles Anagnostopoulos, Sarka Pospisilova, et al. "Tracing the Ontogeny of IgG-Switched CLL: High-Throughput Immunogenetic Evidence." Blood 124, no. 21 (December 6, 2014): 3285. http://dx.doi.org/10.1182/blood.v124.21.3285.3285.
Herrera-Mejía, Julián, Rocío Campos-Vega, Abraham Wall-Medrano, and Florinda Jiménez-Vega. "A Two-Step Single Plex PCR Method for Evaluating Key Colonic Microbiota Markers in Young Mexicans with Autism Spectrum Disorders: Protocol and Pilot Epidemiological Application." Diagnostics 13, no. 14 (July 17, 2023): 2387. http://dx.doi.org/10.3390/diagnostics13142387.
Evans-Holm, Martha, Nicolai Lumbres, Rwik Sen, Patricia Montilla-Perez, Marc A. Paradise, and Peter Lentz. "Abstract 332: Improved high-throughput genomic analysis of urine samples using pixelated-ultrasound to enable personalized genomic profiling and therapeutic developments in cancer." Cancer Research 84, no. 6_Supplement (March 22, 2024): 332. http://dx.doi.org/10.1158/1538-7445.am2024-332.
Trosvik, Pål, Beate Skånseng, Kjetill S. Jakobsen, Nils C. Stenseth, Tormod Næs, and Knut Rudi. "Multivariate Analysis of Complex DNA Sequence Electropherograms for High-Throughput Quantitative Analysis of Mixed Microbial Populations." Applied and Environmental Microbiology 73, no. 15 (June 15, 2007): 4975–83. http://dx.doi.org/10.1128/aem.00128-07.
Barturen, Guillermo, Antonio Rueda, José L. Oliver, and Michael Hackenberg. "MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data." F1000Research 2 (October 15, 2013): 217. http://dx.doi.org/10.12688/f1000research.2-217.v1.
Barturen, Guillermo, Antonio Rueda, José L. Oliver, and Michael Hackenberg. "MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data." F1000Research 2 (February 21, 2014): 217. http://dx.doi.org/10.12688/f1000research.2-217.v2.
de Biase, Dario, Michela Visani, Giorgia Acquaviva, Adele Fornelli, Michele Masetti, Carlo Fabbri, Annalisa Pession, and Giovanni Tallini. "The Role of Next-Generation Sequencing in the Cytologic Diagnosis of Pancreatic Lesions." Archives of Pathology & Laboratory Medicine 142, no. 4 (April 1, 2018): 458–64. http://dx.doi.org/10.5858/arpa.2017-0215-ra.
Ferretti, Luca, Chandana Tennakoon, Adrian Silesian, and Graham Freimanis andPaolo Ribeca. "SiNPle: Fast and Sensitive Variant Calling for Deep Sequencing Data." Genes 10, no. 8 (July 25, 2019): 561. http://dx.doi.org/10.3390/genes10080561.
Liu, Sen, Hongyu Liu, Yunlong Dong, Fengbiao Wang, Huijuan Wang, and Jun Chen. "Gastric carcinoma with a gastrointestinal stromal tumor." médecine/sciences 34 (October 2018): 15–19. http://dx.doi.org/10.1051/medsci/201834f103.
Bentley, Stephen D., and Julian Parkhill. "Genomic perspectives on the evolution and spread of bacterial pathogens." Proceedings of the Royal Society B: Biological Sciences 282, no. 1821 (December 22, 2015): 20150488. http://dx.doi.org/10.1098/rspb.2015.0488.
Meyer, Julia A., Laura E. Hogan, Jinhua Wang, Jun J. Yang, Jay Patel, Ross L. Levine, Stephen P. Hunger, Elizabeth Raetz, Christopher Mason, and William L. Carroll. "High Throughput Transcriptome Sequencing of Pediatric Relapsed Acute Lymphoblastic Leukemia (ALL) Identifies Relapse Specific Mutations and Expression." Blood 116, no. 21 (November 19, 2010): 3233. http://dx.doi.org/10.1182/blood.v116.21.3233.3233.
Zhao, Yuming, Fang Wang, Su Chen, Jun Wan, and Guohua Wang. "Methods of MicroRNA Promoter Prediction and Transcription Factor Mediated Regulatory Network." BioMed Research International 2017 (2017): 1–8. http://dx.doi.org/10.1155/2017/7049406.
Pipis, Menelaos, Alexander M. Rossor, Carolynne M. Doherty, Matilde Laura, and Mary M. Reilly. "15.21 Next-generation sequencing in charcot-marie-tooth disease: opportunities and challenges." Journal of Neurology, Neurosurgery & Psychiatry 90, no. 12 (November 14, 2019): e5.1-e5. http://dx.doi.org/10.1136/jnnp-2019-abn-2.14.
Jingyao, Ma, Zhenping Chen, Huiqing LIU, Jialu Zhang, Hao GU, and Runhui Wu. "Application of High-Throughput Sequencing in the Diagnosis of Inherited Immune-Thrombocytopenia from Children Chronic/Refractory ITP." Blood 134, Supplement_1 (November 13, 2019): 86. http://dx.doi.org/10.1182/blood-2019-126771.
Kolarikova, Kristyna, Radek Vodicka, Radek Vrtel, Julia Stellmachova, Martin Prochazka, Katerina Mensikova, Tereza Bartonikova, Tomas Furst, Petr Kanovsky, and Jan Geryk. "High-Throughput Sequencing Haplotype Analysis Indicates in LRRK2 Gene a Potential Risk Factor for Endemic Parkinsonism in Southeastern Moravia, Czech Republic." Life 12, no. 1 (January 14, 2022): 121. http://dx.doi.org/10.3390/life12010121.