Статті в журналах з теми "RRNA Recognition"
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Pilch, Daniel S., Malvika Kaul, Christopher M. Barbieri, and John E. Kerrigan. "Thermodynamics of aminoglycoside-rRNA recognition." Biopolymers 70, no. 1 (August 13, 2003): 58–79. http://dx.doi.org/10.1002/bip.10411.
Повний текст джерелаDouthwaite, Stephen, Bjørn Voldborg, Lykke Haastrup Hansen, Gunnar Rosendahl, and Birte Vester. "Recognition determinants for proteins and antibiotics within 23S rRNA." Biochemistry and Cell Biology 73, no. 11-12 (December 1, 1995): 1179–85. http://dx.doi.org/10.1139/o95-127.
Повний текст джерелаFukai, S., O. Nureki, S. Sekine, A. Shimada, Dmitry Vassylyev, and S. Yokoyama. "Recognition mechanism of valine tRNA by valyl-rRNA synthetase." Seibutsu Butsuri 41, supplement (2001): S183. http://dx.doi.org/10.2142/biophys.41.s183_1.
Повний текст джерелаRodgers, Margaret L., Yunsheng Sun, and Sarah A. Woodson. "Ribosomal Protein S12 Hastens Nucleation of Co-Transcriptional Ribosome Assembly." Biomolecules 13, no. 6 (June 6, 2023): 951. http://dx.doi.org/10.3390/biom13060951.
Повний текст джерелаNosrati, Meisam, Debayan Dey, Atousa Mehrani, Sarah E. Strassler, Natalia Zelinskaya, Eric D. Hoffer, Scott M. Stagg, Christine M. Dunham, and Graeme L. Conn. "Functionally critical residues in the aminoglycoside resistance-associated methyltransferase RmtC play distinct roles in 30S substrate recognition." Journal of Biological Chemistry 294, no. 46 (October 8, 2019): 17642–53. http://dx.doi.org/10.1074/jbc.ra119.011181.
Повний текст джерелаGerstner, Resi B., Yong Pak, and David E. Draper. "Recognition of 16S rRNA by Ribosomal Protein S4 fromBacillus stearothermophilus†." Biochemistry 40, no. 24 (June 2001): 7165–73. http://dx.doi.org/10.1021/bi010026i.
Повний текст джерелаLebars, Isabelle, Clotilde Husson, Satoko Yoshizawa, Stephen Douthwaite, and Dominique Fourmy. "Recognition Elements in rRNA for the Tylosin Resistance Methyltransferase RlmAII." Journal of Molecular Biology 372, no. 2 (September 2007): 525–34. http://dx.doi.org/10.1016/j.jmb.2007.06.068.
Повний текст джерелаSignorino, Giacomo, Nastaran Mohammadi, Francesco Patanè, Marco Buscetta, Mario Venza, Isabella Venza, Giuseppe Mancuso, et al. "Role of Toll-Like Receptor 13 in Innate Immune Recognition of Group B Streptococci." Infection and Immunity 82, no. 12 (September 15, 2014): 5013–22. http://dx.doi.org/10.1128/iai.02282-14.
Повний текст джерелаKaul, Malvika, and Daniel S. Pilch. "Thermodynamics of Aminoglycoside−rRNA Recognition: The Binding of Neomycin-Class Aminoglycosides to the A Site of 16S rRNA†." Biochemistry 41, no. 24 (June 2002): 7695–706. http://dx.doi.org/10.1021/bi020130f.
Повний текст джерелаPEREDERINA, ANNA, NATALIA NEVSKAYA, OLEG NIKONOV, ALEXEI NIKULIN, PHILIPPE DUMAS, MIN YAO, ISAO TANAKA, MARIA GARBER, GEORGE GONGADZE, and STANISLAV NIKONOV. "Detailed analysis of RNA–protein interactions within the bacterial ribosomal protein L5/5S rRNA complex." RNA 8, no. 12 (December 2002): 1548–57. http://dx.doi.org/10.1017/s1355838202029953.
Повний текст джерелаParameswaran, Preethi, Yashaswina Arora, Rajesh Patidar, and Nihar Ranjan. "Bacterial rRNA A-site recognition by DAPI: Signatures of intercalative binding." Biophysical Chemistry 274 (July 2021): 106589. http://dx.doi.org/10.1016/j.bpc.2021.106589.
Повний текст джерелаBao, Hongyu, Na Wang, Chongyuan Wang, Yiyang Jiang, Jiuyang Liu, Li Xu, Jihui Wu, and Yunyu Shi. "Structural basis for the specific recognition of 18S rRNA by APUM23." Nucleic Acids Research 45, no. 20 (October 3, 2017): 12005–14. http://dx.doi.org/10.1093/nar/gkx872.
Повний текст джерелаKorobeinikova, A. V., G. M. Gongadze, A. P. Korepanov, B. D. Eliseev, M. V. Bazhenova, and M. B. Garber. "5S rRNA-recognition module of CTC family proteins and its evolution." Biochemistry (Moscow) 73, no. 2 (February 2008): 156–63. http://dx.doi.org/10.1134/s0006297908020065.
Повний текст джерелаRoss, Wilma, Sarah E. Aiyar, Julia Salomon, and Richard L. Gourse. "Escherichia coli Promoters with UP Elements of Different Strengths: Modular Structure of Bacterial Promoters." Journal of Bacteriology 180, no. 20 (October 15, 1998): 5375–83. http://dx.doi.org/10.1128/jb.180.20.5375-5383.1998.
Повний текст джерелаCampbell, F. E., and D. R. Setzer. "Transcription termination by RNA polymerase III: uncoupling of polymerase release from termination signal recognition." Molecular and Cellular Biology 12, no. 5 (May 1992): 2260–72. http://dx.doi.org/10.1128/mcb.12.5.2260-2272.1992.
Повний текст джерелаCampbell, F. E., and D. R. Setzer. "Transcription termination by RNA polymerase III: uncoupling of polymerase release from termination signal recognition." Molecular and Cellular Biology 12, no. 5 (May 1992): 2260–72. http://dx.doi.org/10.1128/mcb.12.5.2260.
Повний текст джерелаThanaraj, T. A., A. S. Kolaskar, and M. W. Pandit. "Prediction of the Recognition Sites on 16S and 23S rRNAs fromE.colifor the Formation of 16S-23S rRNA Complex." Journal of Biomolecular Structure and Dynamics 6, no. 3 (December 1988): 587–92. http://dx.doi.org/10.1080/07391102.1988.10506509.
Повний текст джерелаARIFIN, UMILAELA, DJOKO T. ISKANDAR, DAVID P. BICKFORD, RAFE M. BROWN, RUDOLF MEIER, and SUJATHA NARAYANAN KUTTY. "Phylogenetic relationships within the genus Staurois (Anura, Ranidae) based on 16S rRNA sequences." Zootaxa 2744, no. 1 (January 19, 2011): 39. http://dx.doi.org/10.11646/zootaxa.2744.1.3.
Повний текст джерелаChen, XiaoZhou. "A New Signal Segmemtation Algorithm for Recognition of 23S rRNA Structual Domains." Procedia Engineering 15 (2011): 1509–13. http://dx.doi.org/10.1016/j.proeng.2011.08.280.
Повний текст джерелаNIELSEN, ALLAN K., STEPHEN DOUTHWAITE, and BIRTE VESTER. "Negative in vitro selection identifies the rRNA recognition motif for ErmE methyltransferase." RNA 5, no. 8 (August 1999): 1034–41. http://dx.doi.org/10.1017/s1355838299990349.
Повний текст джерелаWang, Xiaojing, Michael T. Migawa, Kristin A. Sannes-Lowery, and Eric E. Swayze. "The synthesis and 16S A-site rRNA recognition of carbohydrate-free aminoglycosides." Bioorganic & Medicinal Chemistry Letters 15, no. 22 (November 2005): 4919–22. http://dx.doi.org/10.1016/j.bmcl.2005.08.027.
Повний текст джерелаRowe, Sebastian J., Ryan J. Mecaskey, Mohamed Nasef, Rachel C. Talton, Rory E. Sharkey, Joshua C. Halliday, and Jack A. Dunkle. "Shared requirements for key residues in the antibiotic resistance enzymes ErmC and ErmE suggest a common mode of RNA recognition." Journal of Biological Chemistry 295, no. 51 (October 5, 2020): 17476–85. http://dx.doi.org/10.1074/jbc.ra120.014280.
Повний текст джерелаHead, Kelly, Koichi S. Kobayashi, Michael F. Criscitiello, and Saptha Vijayan. "Demonstration of TLR response in O. mykiss by the bacterial 23S rRNA motif." Journal of Immunology 202, no. 1_Supplement (May 1, 2019): 190.61. http://dx.doi.org/10.4049/jimmunol.202.supp.190.61.
Повний текст джерелаHenry, Kemardo K., Wilma Ross, Kevin S. Myers, Kimberly C. Lemmer, Jessica M. Vera, Robert Landick, Timothy J. Donohue, and Richard L. Gourse. "A majority ofRhodobacter sphaeroidespromoters lack a crucial RNA polymerase recognition feature, enabling coordinated transcription activation." Proceedings of the National Academy of Sciences 117, no. 47 (November 9, 2020): 29658–68. http://dx.doi.org/10.1073/pnas.2010087117.
Повний текст джерелаCorrêa, Laís L., Marta A. Witek, Natalia Zelinskaya, Renata C. Picão, and Graeme L. Conn. "Heterologous Expression and Functional Characterization of the Exogenously Acquired Aminoglycoside Resistance Methyltransferases RmtD, RmtD2, and RmtG." Antimicrobial Agents and Chemotherapy 60, no. 1 (November 9, 2015): 699–702. http://dx.doi.org/10.1128/aac.02482-15.
Повний текст джерелаBeumer, Amy, and Jayne B. Robinson. "A Broad-Host-Range, Generalized Transducing Phage (SN-T) Acquires 16S rRNA Genes from Different Genera of Bacteria." Applied and Environmental Microbiology 71, no. 12 (December 2005): 8301–4. http://dx.doi.org/10.1128/aem.71.12.8301-8304.2005.
Повний текст джерелаRussell, I. D., and D. Tollervey. "NOP3 is an essential yeast protein which is required for pre-rRNA processing." Journal of Cell Biology 119, no. 4 (November 15, 1992): 737–47. http://dx.doi.org/10.1083/jcb.119.4.737.
Повний текст джерелаCorrell, Carl C., Betty Freeborn, Peter B. Moore, and Thomas A. Steitz. "Metals, Motifs, and Recognition in the Crystal Structure of a 5S rRNA Domain." Cell 91, no. 5 (November 1997): 705–12. http://dx.doi.org/10.1016/s0092-8674(00)80457-2.
Повний текст джерелаWang, Lei, Martin Ciganda, and Noreen Williams. "Defining the RNA-Protein Interactions in the Trypanosome Preribosomal Complex." Eukaryotic Cell 12, no. 4 (February 8, 2013): 559–66. http://dx.doi.org/10.1128/ec.00004-13.
Повний текст джерелаClarridge, Jill E. "Impact of 16S rRNA Gene Sequence Analysis for Identification of Bacteria on Clinical Microbiology and Infectious Diseases." Clinical Microbiology Reviews 17, no. 4 (October 2004): 840–62. http://dx.doi.org/10.1128/cmr.17.4.840-862.2004.
Повний текст джерелаLee, W. C., D. Zabetakis, and T. Mélèse. "NSR1 is required for pre-rRNA processing and for the proper maintenance of steady-state levels of ribosomal subunits." Molecular and Cellular Biology 12, no. 9 (September 1992): 3865–71. http://dx.doi.org/10.1128/mcb.12.9.3865-3871.1992.
Повний текст джерелаLee, W. C., D. Zabetakis, and T. Mélèse. "NSR1 is required for pre-rRNA processing and for the proper maintenance of steady-state levels of ribosomal subunits." Molecular and Cellular Biology 12, no. 9 (September 1992): 3865–71. http://dx.doi.org/10.1128/mcb.12.9.3865.
Повний текст джерелаHager, Jutta, Bart L. Staker, and Ursula Jakob. "Substrate Binding Analysis of the 23S rRNA Methyltransferase RrmJ." Journal of Bacteriology 186, no. 19 (October 1, 2004): 6634–42. http://dx.doi.org/10.1128/jb.186.19.6634-6642.2004.
Повний текст джерелаJanse, Ingmar, W. Edwin A. Kardinaal, Marion Meima, Jutta Fastner, Petra M. Visser, and Gabriel Zwart. "Toxic and Nontoxic Microcystis Colonies in Natural Populations Can Be Differentiated on the Basis of rRNA Gene Internal Transcribed Spacer Diversity." Applied and Environmental Microbiology 70, no. 7 (July 2004): 3979–87. http://dx.doi.org/10.1128/aem.70.7.3979-3987.2004.
Повний текст джерелаLuo, Jiaoyang, Dan Yan, Da Zhang, Yumei Han, Xiaoping Dong, Yong Yang, Kejun Deng, and Xiaohe Xiao. "Application of 12S rRNA Barcodes for the Identification of Animal-Derived Drugs." Journal of Pharmacy & Pharmaceutical Sciences 14, no. 3 (September 9, 2011): 358. http://dx.doi.org/10.18433/j3n017.
Повний текст джерелаLearned, R. M., S. Cordes, and R. Tjian. "Purification and characterization of a transcription factor that confers promoter specificity to human RNA polymerase I." Molecular and Cellular Biology 5, no. 6 (June 1985): 1358–69. http://dx.doi.org/10.1128/mcb.5.6.1358-1369.1985.
Повний текст джерелаLearned, R. M., S. Cordes, and R. Tjian. "Purification and characterization of a transcription factor that confers promoter specificity to human RNA polymerase I." Molecular and Cellular Biology 5, no. 6 (June 1985): 1358–69. http://dx.doi.org/10.1128/mcb.5.6.1358.
Повний текст джерелаDerz, Kerstin, Ulrich Klinner, Ingolf Schuphan, Erko Stackebrandt, and Reiner M. Kroppenstedt. "Mycobacterium pyrenivorans sp. nov., a novel polycyclic-aromatic-hydrocarbon-degrading species." International Journal of Systematic and Evolutionary Microbiology 54, no. 6 (November 1, 2004): 2313–17. http://dx.doi.org/10.1099/ijs.0.03003-0.
Повний текст джерелаChu, J. L., N. Brot, H. Weissbach, and K. Elkon. "Lupus antiribosomal P antisera contain antibodies to a small fragment of 28S rRNA located in the proposed ribosomal GTPase center." Journal of Experimental Medicine 174, no. 3 (September 1, 1991): 507–14. http://dx.doi.org/10.1084/jem.174.3.507.
Повний текст джерелаBaneth, Gad, John R. Barta, Varda Shkap, Donald S. Martin, Douglass K. Macintire, and Nancy Vincent-Johnson. "Genetic and Antigenic Evidence Supports the Separation of Hepatozoon canis and Hepatozoon americanum at the Species Level." Journal of Clinical Microbiology 38, no. 3 (2000): 1298–301. http://dx.doi.org/10.1128/jcm.38.3.1298-1301.2000.
Повний текст джерелаAykut, Yilmaz. "The importance in DNA barcoding of the regions which is covering rRNA genes and its sequences in the genus Quercus L." Bangladesh Journal of Plant Taxonomy 27, no. 2 (December 11, 2020): 261–71. http://dx.doi.org/10.3329/bjpt.v27i2.50666.
Повний текст джерелаPan, Wen-An, Hsin-Yue Tsai, Shun-Chang Wang, Michael Hsiao, Pei-Yu Wu, and Ming-Daw Tsai. "The RNA recognition motif of NIFK is required for rRNA maturation during cell cycle progression." RNA Biology 12, no. 3 (March 4, 2015): 255–67. http://dx.doi.org/10.1080/15476286.2015.1017221.
Повний текст джерелаMasquida, Benoît, Brice Felden, and Eric Westhof. "Context dependent RNA-RNA recognition in a three-dimensional model of the 16S rRNA core." Bioorganic & Medicinal Chemistry 5, no. 6 (June 1997): 1021–35. http://dx.doi.org/10.1016/s0968-0896(97)00053-9.
Повний текст джерелаTillault, Anne-Sophie, Sarah K. Schultz, Hans-Joachim Wieden, and Ute Kothe. "Molecular Determinants for 23S rRNA Recognition and Modification by the E. coli Pseudouridine Synthase RluE." Journal of Molecular Biology 430, no. 9 (April 2018): 1284–94. http://dx.doi.org/10.1016/j.jmb.2018.03.011.
Повний текст джерелаLu, Ming, and David E. Draper. "On the role of rRNA tertiary structure in recognition of ribosomal protein L11 and thiostrepton." Nucleic Acids Research 23, no. 17 (1995): 3426–33. http://dx.doi.org/10.1093/nar/23.17.3426.
Повний текст джерелаKvist, Sebastian, Christopher E. Laumer, Juan Junoy, and Gonzalo Giribet. "New insights into the phylogeny, systematics and DNA barcoding of Nemertea." Invertebrate Systematics 28, no. 3 (2014): 287. http://dx.doi.org/10.1071/is13061.
Повний текст джерелаEhresmann, Chantal, Claude Philippe, E. Westhof, Bernard Ehresmann, Lionel Bénard, and Claude Portier. "A pseudoknot is required for efficient translational initiation and regulation of the Escherichia coli rpsO gene coding for ribosomal protein S15." Biochemistry and Cell Biology 73, no. 11-12 (December 1, 1995): 1131–40. http://dx.doi.org/10.1139/o95-122.
Повний текст джерелаNejat, Naghmeh, Ganesan Vadamalai, Robert E. Davis, Nigel A. Harrison, Kamaruzaman Sijam, Matthew Dickinson, Siti Nor Akmar Abdullah, and Yan Zhao. "‘Candidatus Phytoplasma malaysianum’, a novel taxon associated with virescence and phyllody of Madagascar periwinkle (Catharanthus roseus)." International Journal of Systematic and Evolutionary Microbiology 63, Pt_2 (February 1, 2013): 540–48. http://dx.doi.org/10.1099/ijs.0.041467-0.
Повний текст джерелаFewell, Sheara W., and John L. Woolford. "Ribosomal Protein S14 of Saccharomyces cerevisiae Regulates Its Expression by Binding toRPS14B Pre-mRNA and to 18S rRNA." Molecular and Cellular Biology 19, no. 1 (January 1, 1999): 826–34. http://dx.doi.org/10.1128/mcb.19.1.826.
Повний текст джерелаHarrison, Nigel A., Robert E. Davis, Carlos Oropeza, Ericka E. Helmick, María Narváez, Simon Eden-Green, Michel Dollet, and Matthew Dickinson. "‘Candidatus Phytoplasma palmicola’, associated with a lethal yellowing-type disease of coconut (Cocos nucifera L.) in Mozambique." International Journal of Systematic and Evolutionary Microbiology 64, Pt_6 (June 1, 2014): 1890–99. http://dx.doi.org/10.1099/ijs.0.060053-0.
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