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Статті в журналах з теми "Phenotype Microarry"
Wang, Mengyu, Jingfang Ju, Stein Saeboe-Larssen, Svein-Ole Mikalsen, Elena Olsen, Jahn M. Nesland, Oystein Fodstad, Gunhild Maelandsmo, and Gunnar Kvalheim. "Characterization of a Bone Marrow Derived Mesenchymal Cell Line from Nude Rat Assembling Tumor Stem/Progenitor Cell Properties In Vitro and In Vivo." Blood 108, no. 11 (November 16, 2006): 4256. http://dx.doi.org/10.1182/blood.v108.11.4256.4256.
Повний текст джерелаDe, Supriyo, Yongqing Zhang, John R. Garner, S. Alex Wang, and Kevin G. Becker. "Disease and phenotype gene set analysis of disease-based gene expression in mouse and human." Physiological Genomics 42A, no. 2 (October 2010): 162–67. http://dx.doi.org/10.1152/physiolgenomics.00008.2010.
Повний текст джерелаAmeen, Sirwan Muhsin Muhammed Ameen. "High throughput Phenotypic Microarray profiling of Mycobacterium abscessus." Journal of Zankoy Sulaimani - Part A 20, no. 2 (June 20, 2018): 9–20. http://dx.doi.org/10.17656/jzs.10720.
Повний текст джерелаvon Eiff, Christof, Peter McNamara, Karsten Becker, Donna Bates, Xiang-He Lei, Michael Ziman, Barry R. Bochner, Georg Peters, and Richard A. Proctor. "Phenotype Microarray Profiling of Staphylococcus aureus menD and hemB Mutants with the Small-Colony-Variant Phenotype." Journal of Bacteriology 188, no. 2 (January 15, 2006): 687–93. http://dx.doi.org/10.1128/jb.188.2.687-693.2006.
Повний текст джерелаBochner, B. R. "Phenotype MicroArrays for High-Throughput Phenotypic Testing and Assay of Gene Function." Genome Research 11, no. 7 (July 1, 2001): 1246–55. http://dx.doi.org/10.1101/gr.186501.
Повний текст джерелаCard, Roderick, Jiancheng Zhang, Priya Das, Charlotte Cook, Neil Woodford, and Muna F. Anjum. "Evaluation of an Expanded Microarray for Detecting Antibiotic Resistance Genes in a Broad Range of Gram-Negative Bacterial Pathogens." Antimicrobial Agents and Chemotherapy 57, no. 1 (November 5, 2012): 458–65. http://dx.doi.org/10.1128/aac.01223-12.
Повний текст джерелаPaschoalini, Rafael Bispo, Rozany Mucha Dufloth, Francisco Alves Moraes Neto, and Fernando C. Schmitt. "Cytological Criteria for Predicting the Luminal Phenotype of Breast Carcinoma." Acta Cytologica 60, no. 5 (2016): 406–12. http://dx.doi.org/10.1159/000448835.
Повний текст джерелаÇebi, Alper Han, and Şule Altıner. "Application of Chromosome Microarray Analysis in the Investigation of Developmental Disabilities and Congenital Anomalies: Single Center Experience and Review of NRXN3 and NEDD4L Deletions." Molecular Syndromology 11, no. 4 (2020): 197–206. http://dx.doi.org/10.1159/000509645.
Повний текст джерелаBiyani, Manish, Y. Hosoi, T. Ichiki, and N. Nemoto. "3P075 Genotype-phenotype linked Microarray Evolution Reactor: Construction and screening a new fluorescent protein from random-sequence space." Seibutsu Butsuri 45, supplement (2005): S222. http://dx.doi.org/10.2142/biophys.45.s222_3.
Повний текст джерелаZhou, Lu, Xiang-He Lei, Barry R. Bochner, and Barry L. Wanner. "Phenotype MicroArray Analysis of Escherichia coli K-12 Mutants with Deletions of All Two-Component Systems." Journal of Bacteriology 185, no. 16 (August 15, 2003): 4956–72. http://dx.doi.org/10.1128/jb.185.16.4956-4972.2003.
Повний текст джерелаДисертації з теми "Phenotype Microarry"
Wennmalm, Kristian. "Analytical strategies for identifying relevant phenotypes in microarray data /." Stockholm, 2007. http://diss.kib.ki.se/2007/978-91-7357-401-3/.
Повний текст джерелаSjödin, Andreas. "Populus transcriptomics : from noise to biology /." Umeå : Department of Plant Physiology, Umeå University, 2007. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-1423.
Повний текст джерелаTurton, Nicola. "Association of gene expression and genomic change, analysed using microarrays, with phenotype in breast carcinoma." Thesis, University of Leicester, 2003. http://hdl.handle.net/2381/30770.
Повний текст джерелаYahaya, Badrul H. "Analysis of time-dependent transcriptomic and phenotypic changes associated with repair and regeneration in the airway epithelium." Thesis, University of Edinburgh, 2010. http://hdl.handle.net/1842/4800.
Повний текст джерелаShaffer, Justin P., Jana M. U'Ren, Rachel E. Gallery, David A. Baltrus, and A. Elizabeth Arnold. "An Endohyphal Bacterium (Chitinophaga, Bacteroidetes) Alters Carbon Source Use by Fusarium keratoplasticum (F. solani Species Complex, Nectriaceae)." FRONTIERS MEDIA SA, 2017. http://hdl.handle.net/10150/623193.
Повний текст джерелаGhadiali, Alifiya H. "Studies on Mycobacterium avium subsp. paratuberculosis genotypic and phenotypic variations /." Connect to this title online, 2005. http://rave.ohiolink.edu/etdc/view?acc%5Fnum=osu1110229469.
Повний текст джерелаDocument formatted into pages; contains xxi, 216 p. Includes bibliographical references. Abstract available online via OhioLINK's ETD Center; full text release delayed at author's request until 2006 March 9.
Roberge, Christopher (Christopher M. ). "Design, manufacture, and application of DNA microarrays to study gene expression phenotypes of lysine-producing Corynebacterium glutamicum." Thesis, Massachusetts Institute of Technology, 2005. http://hdl.handle.net/1721.1/32322.
Повний текст джерелаIncludes bibliographical references (leaves 197-213).
Corynebacterium glutamicum partial genome DNA microarrays were constructed that were capable of assaying the transcriptional profile of the genes of pathways involved in central carbon metabolism and lysine biosynthesis. It was found that to ensure arrays of high quality, protocols applying the arrays should include DNase treatment of RNA samples. additional RNA filtration purification steps, and the use of gene specific primers in the formation of labeled cDNA through reverse transcription. After implementing these procedures, the accuracy and reproducibility of the array data were validated. The microarrays were used to explore the effects of the over-expression of the key anaplerotic enzyme pyruvate carboxylase and the use of different medium carbon source compositions, both of which have been shown to influence the yields of biomass on carbon and of lysine on biomass. Three different strains of C. glutamicum that were grown on six different minimal medium formulations that varied in their balance of glucose and lactate were assayed by isolating total mRNA samples from cultures in three different phases of growth and lysine production. Genes associated with glycolysis and the pentose phosphate pathway showed decreased transcript concentrations as the available carbon source was shifted from glucose to lactate, while those associated with the TCA cycle and the glyoxylate bypass demonstrated increased transcription. As the cultures stopped generating biomass and began generating lysine, mRNA of genes associated with lysine synthesis and export was measured at elevated concentrations.
(cont.) Reduced gene expression trends seen for aspartokinase and aspartate semialdehyde dehydrogenase suggest that the enzymes are bottlenecks to lysine production, particularly when pyruvate carboxylase is over-expressed and lactate is the available carbon source. This over-expressing strain also had higher transcription levels of the genes of biotin synthesis. and lower transcription levels of the acyl-coA carboxylases dtsRl, dtsR2, accC, and accD. Other results implied that malic enzyme is co-expressed with pyruvate carboxylase to better allow cultures grown on lactate to produce NADPH in the absence of significant pentose phosphate pathway flux. Also, the transcriptional and flux profiles of a pair of C. glutamicum strains grown on two different medium compositions of isotopically labeled glucose and lactate were determined simultaneously from the same set of actively growing and lysine-producing cultures. Flux maps for each of the four combinations of strain and medium were constructed using calculations derived from metabolite balances and GC-MS measurements of the isotopic distributions within biomass hydrolysates of the pseudo-steady-state cultures. Comparisons of the two sets of data showed that 19 of 28 pairs of flux and transcription measurements had trends with good agreement with one another. Different pathways of the metabolic network were found to be controlled via transcription in varying degrees. On average, the Embden- Meyerhof-Parnas pathway was shown to be less likely to be regulated though transcription than the pathways of the tricarboxylic acid cycle and central carbon anaplerosis.
(cont.) In the split pathway available to the cells for producing lysine, the succinylation branch showed an increase in flux for only the case of a pyruvate carboxylase over-expressing strain that was grown on lactate, while the alternate dehydrogenation branch showed a complementary decrease in flux. These flux changes were matched by changes in transcription that only occurred for the same culture and growth medium. Through these findings we have demonstrated the application of C. glutamicum DNA microarrays to the determination of how the cells regulate their responses at the transcriptional level to changes in both gene over-expression and medium composition.
by Christopher Roberge.
Ph.D.
Wong, Chieh Lee. "Identification of unique genetic and epigenetic signatures in myeloproliferative neoplasms using microarray and next generation sequencing : association with MPN-related mutations and clinical phenotypes." Thesis, Imperial College London, 2016. http://hdl.handle.net/10044/1/52714.
Повний текст джерелаMok, Bobo. "Genomic and transcriptomic variation in blood stage Plasmodium falciparum /." Stockholm : Karolinska institutet, 2007. http://diss.kib.ki.se/2007/978-91-7357-291-0/.
Повний текст джерелаMartínez, Enguita David. "Identification of personalized multi-omic disease modules in asthma." Thesis, Högskolan i Skövde, Institutionen för biovetenskap, 2018. http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-15987.
Повний текст джерелаЧастини книг з теми "Phenotype Microarry"
Shea, April, Mark Wolcott, Simon Daefler, and David A. Rozak. "Biolog Phenotype Microarrays." In Microbial Systems Biology, 331–73. Totowa, NJ: Humana Press, 2012. http://dx.doi.org/10.1007/978-1-61779-827-6_12.
Повний текст джерелаMackie, Amanda M., Karl A. Hassan, Ian T. Paulsen, and Sasha G. Tetu. "Biolog Phenotype MicroArrays for Phenotypic Characterization of Microbial Cells." In Methods in Molecular Biology, 123–30. Totowa, NJ: Humana Press, 2014. http://dx.doi.org/10.1007/978-1-62703-712-9_10.
Повний текст джерелаBochner, Barry R. "Phenomics and Phenotype Microarrays: Applications Complementing Metagenomics." In Handbook of Molecular Microbial Ecology I, 533–40. Hoboken, NJ, USA: John Wiley & Sons, Inc., 2011. http://dx.doi.org/10.1002/9781118010518.ch59.
Повний текст джерелаGawand, Pratish, Laurence Yang, William R. Cluett, and Radhakrishnan Mahadevan. "Metabolic Model Refinement Using Phenotypic Microarray Data." In Methods in Molecular Biology, 47–59. Totowa, NJ: Humana Press, 2013. http://dx.doi.org/10.1007/978-1-62703-299-5_3.
Повний текст джерелаThorn, Christopher C., Deborah Williams, and Thomas C. Freeman. "Oligonucleotide Microarray Expression Profiling of Contrasting Invasive Phenotypes in Colorectal Cancer." In Methods in Molecular Biology, 203–21. Totowa, NJ: Humana Press, 2011. http://dx.doi.org/10.1007/978-1-61779-163-5_17.
Повний текст джерелаPerez, Dragana Veljkovic, and Kay A. Robbins. "Detection of Phenotypes in Microarray Data Using Force- Directed Placement Transformss." In Machine Learning and Data Mining in Pattern Recognition, 320–34. Berlin, Heidelberg: Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-23199-5_24.
Повний текст джерелаBaarda, Benjamin I., and Aleksandra E. Sikora. "Phenotypic MicroArray Screening of Neisseria gonorrhoeae in Chemically Defined Liquid Medium." In Neisseria gonorrhoeae, 207–16. New York, NY: Springer New York, 2019. http://dx.doi.org/10.1007/978-1-4939-9496-0_13.
Повний текст джерелаFox, Edward M., and Kieran Jordan. "High-Throughput Characterization of Listeria monocytogenes Using the OmniLog Phenotypic Microarray." In Methods in Molecular Biology, 103–8. New York, NY: Springer New York, 2014. http://dx.doi.org/10.1007/978-1-4939-0703-8_9.
Повний текст джерелаLuque-Sastre, Laura, Kieran Jordan, Séamus Fanning, and Edward M. Fox. "High-Throughput Characterization of Listeria monocytogenes Using the OmniLog Phenotypic Microarray." In Listeria Monocytogenes, 107–13. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0982-8_8.
Повний текст джерелаChua, Gordon. "Identification of Transcription Factor Targets by Phenotypic Activation and Microarray Expression Profiling in Yeast." In Methods in Molecular Biology, 19–35. Totowa, NJ: Humana Press, 2009. http://dx.doi.org/10.1007/978-1-59745-540-4_2.
Повний текст джерелаТези доповідей конференцій з теми "Phenotype Microarry"
Chen, Argon. "Analysis of microarray data with multiple phenotypes." In Industrial Engineering (CIE39). IEEE, 2009. http://dx.doi.org/10.1109/iccie.2009.5223511.
Повний текст джерелаJacobsen, Janet S., Dominique C. Joyner, and Sharon E. Borglin. "Visualization of Growth Curve Data from Phenotype Microarray Experiments." In 2007 11th International Conference Information Visualization (IV '07). IEEE, 2007. http://dx.doi.org/10.1109/iv.2007.131.
Повний текст джерелаZhao, Yuhai, Ying Yin, and Guoren Wang. "Unsupervised Identifying Diagnostic Genes and Specific Phenotypes from Microarray Data." In 2006 International Conference on Computational Intelligence and Security. IEEE, 2006. http://dx.doi.org/10.1109/iccias.2006.294239.
Повний текст джерелаTohsato, Yukako, Tadahiro Taniguchi, Hirotada Mori, and Masahiro Ito. "Analyzing Phenotype Microarray Data for Escherichia coli Using an Infinite Relational Model." In 2021 IEEE 9th International Conference on Bioinformatics and Computational Biology (ICBCB). IEEE, 2021. http://dx.doi.org/10.1109/icbcb52223.2021.9459236.
Повний текст джерелаHsun-Hsien Chang and M. McGeachie. "Phenotype prediction by integrative network analysis of SNP and gene expression microarrays." In 2011 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE, 2011. http://dx.doi.org/10.1109/iembs.2011.6091689.
Повний текст джерелаDymacek, Julian, and Nancy Lan Guo. "Systems Approach to Identifying Relevant Pathways from Phenotype Information in Dose-Dependent Time Series Microarray Data." In 2011 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, 2011. http://dx.doi.org/10.1109/bibm.2011.76.
Повний текст джерелаMisman, M. F., S. Deris, S. Z. M. Hashim, R. Jumali, and M. S. Mohamad. "Pathway-Based Microarray Analysis for Defining Statistical Significant Phenotype-Related Pathways: A Review of Common Approaches." In 2009 International Conference on Information Management and Engineering. IEEE, 2009. http://dx.doi.org/10.1109/icime.2009.103.
Повний текст джерелаYeh, Hsiang-Yuan, Yi-Yu Liu, Cheng-Yu Yeh, and Von-Wun Soo. "Identifying Prostate Cancer-Related Networks from Microarray Data Based on Genotype-Phenotype Networks Using Markov Blanket Search." In 2010 IEEE International Conference on BioInformatics and BioEngineering. IEEE, 2010. http://dx.doi.org/10.1109/bibe.2010.64.
Повний текст джерелаBolger, Kenneth. "LSC Abstract – The use of microarray analysis of gene signalling to determine heterogeneity of COPD exacerbation phenotypes." In ERS International Congress 2016 abstracts. European Respiratory Society, 2016. http://dx.doi.org/10.1183/13993003.congress-2016.yi5.
Повний текст джерелаHuang, Alice H., and Robert L. Mauck. "Repeated Dynamic Loading Modulates Cartilage Gene Expression but Does Not Improve Mechanical Properties of MSC-Laden Hydrogels." In ASME 2009 Summer Bioengineering Conference. American Society of Mechanical Engineers, 2009. http://dx.doi.org/10.1115/sbc2009-204339.
Повний текст джерелаЗвіти організацій з теми "Phenotype Microarry"
Marchionni, Enrica, Daniele Guadagnolo, Gioia Mastromoro, and Antonio Pizzuti. Diagnostic yield of prenatal Exome Sequencing in fetal Central Nervous System Anomalies: systematic review and meta-analysis. INPLASY - International Platform of Registered Systematic Review and Meta-analysis Protocols, May 2023. http://dx.doi.org/10.37766/inplasy2023.5.0003.
Повний текст джерелаTucker, Mark L., Shimon Meir, Amnon Lers, Sonia Philosoph-Hadas, and Cai-Zhong Jiang. Elucidation of signaling pathways that regulate ethylene-induced leaf and flower abscission of agriculturally important plants. United States Department of Agriculture, January 2012. http://dx.doi.org/10.32747/2012.7597929.bard.
Повний текст джерелаMeir, Shimon, Michael S. Reid, Cai-Zhong Jiang, Amnon Lers, and Sonia Philosoph-Hadas. Molecular Studies of Postharvest Leaf and Flower Senescence. United States Department of Agriculture, January 2011. http://dx.doi.org/10.32747/2011.7592657.bard.
Повний текст джерелаLers, Amnon, and Gan Susheng. Study of the regulatory mechanism involved in dark-induced Postharvest leaf senescence. United States Department of Agriculture, January 2009. http://dx.doi.org/10.32747/2009.7591734.bard.
Повний текст джерелаBarg, Rivka, Erich Grotewold, and Yechiam Salts. Regulation of Tomato Fruit Development by Interacting MYB Proteins. United States Department of Agriculture, January 2012. http://dx.doi.org/10.32747/2012.7592647.bard.
Повний текст джерела