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Статті в журналах з теми "Mitogenomes"
Burzyński, Artur, and Marianna Soroka. "Complete paternally inherited mitogenomes of two freshwater mussels Unio pictorum and Sinanodonta woodiana (Bivalvia: Unionidae)." PeerJ 6 (September 11, 2018): e5573. http://dx.doi.org/10.7717/peerj.5573.
Повний текст джерелаLi, Shu-Yi, Yan-Min Zhao, Bing-Xin Guo, Chen-Hong Li, Bing-Jiao Sun, and Xiao-Long Lin. "Comparative Analysis of Mitogenomes of Chironomus (Diptera: Chironomidae)." Insects 13, no. 12 (December 16, 2022): 1164. http://dx.doi.org/10.3390/insects13121164.
Повний текст джерелаYang, Chao, Xiaojuan Du, Yuxin Liu, Hao Yuan, Qingxiong Wang, Xiang Hou, Huisheng Gong, et al. "Comparative mitogenomics of the genus Motacilla (Aves, Passeriformes) and its phylogenetic implications." ZooKeys 1109 (July 1, 2022): 49–65. http://dx.doi.org/10.3897/zookeys.1109.81125.
Повний текст джерелаMiao, Yujing, Haimei Chen, Wanqi Xu, Chang Liu, and Linfang Huang. "Cistanche Species Mitogenomes Suggest Diversity and Complexity in Lamiales-Order Mitogenomes." Genes 13, no. 10 (October 4, 2022): 1791. http://dx.doi.org/10.3390/genes13101791.
Повний текст джерелаMa, Yan, and Ying Miao. "Mitogenomic Comparison of the Mole Crickets Gryllotalpidae with the Phylogenetic Implications (Orthoptera: Ensifera)." Insects 13, no. 10 (October 11, 2022): 919. http://dx.doi.org/10.3390/insects13100919.
Повний текст джерелаYang, Mingsheng, Bingyi Hu, Lin Zhou, Xiaomeng Liu, Yuxia Shi, Lu Song, Yunshan Wei, and Jinfeng Cao. "First mitochondrial genome from Yponomeutidae (Lepidoptera, Yponomeutoidea) and the phylogenetic analysis for Lepidoptera." ZooKeys 879 (October 9, 2019): 137–56. http://dx.doi.org/10.3897/zookeys.879.35101.
Повний текст джерелаSinn, Brandon T., and Craig F. Barrett. "Ancient Mitochondrial Gene Transfer between Fungi and the Orchids." Molecular Biology and Evolution 37, no. 1 (August 29, 2019): 44–57. http://dx.doi.org/10.1093/molbev/msz198.
Повний текст джерелаTeske, Peter R. "Mitochondrial genome announcements need to consider existing short sequences from closely related species to prevent taxonomic errors." Conservation Genetics Resources 13, no. 3 (May 21, 2021): 359–65. http://dx.doi.org/10.1007/s12686-021-01214-7.
Повний текст джерелаLi, Qiang, Ting Zhang, Lijiao Li, Zhijie Bao, Wenying Tu, Peng Xiang, Qian Wu, Ping Li, Mei Cao, and Wenli Huang. "Comparative Mitogenomic Analysis Reveals Intraspecific, Interspecific Variations and Genetic Diversity of Medical Fungus Ganoderma." Journal of Fungi 8, no. 8 (July 26, 2022): 781. http://dx.doi.org/10.3390/jof8080781.
Повний текст джерелаZhang, Dong, Hong Zou, Ivan Jakovlić, Shan G. Wu, Ming Li, Jin Zhang, Rong Chen, Wen X. Li, and Gui T. Wang. "Mitochondrial Genomes of Two Thaparocleidus Species (Platyhelminthes: Monogenea) Reveal the First rRNA Gene Rearrangement among the Neodermata." International Journal of Molecular Sciences 20, no. 17 (August 28, 2019): 4214. http://dx.doi.org/10.3390/ijms20174214.
Повний текст джерелаДисертації з теми "Mitogenomes"
Shen, Hong. "Mitogenomic analysis of decapod phylogeny." Doctoral thesis, Humboldt-Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät I, 2012. http://dx.doi.org/10.18452/16505.
Повний текст джерелаFor a comprehensive study of decapod phylogeny at the mitochondrial genome level, I have sequenced the mitochondrial genome of 13 decapods. Together with available sequences of 31 decapods from GenBank, and the mitochondrial genome of Dromia personata provided by the Bonn University, the dataset now cover all major decapod taxa. Maximum likelihood (ML) and Bayesian inference (BI) of the nucleotide and amino acid datasets reveal similar topologies at the higher level relationships: (((((((Anomala, Brachyura), Thalassinida: Gebiidea) Thalassinida: Axiidea), Astacidea), Achelata), Stenopodidea), Caridea), Dendrobranchiata). Nevertheless, one problematic taxon, Polychelida, with ambiguous affinities is recognized. At the lower level, most taxa are monophyletic, whereas the Thalassinida is paraphyletic, which is consistent with some morphological and molecular results. An inversion spanning from S-E-F tRNA cluster to the I-Q-M tRNA cluster occurred in Procambarus fallax f. virginalis, Homarus gammarus, and one priapulid Priapulus caudatus. Compared with the gene arrangement of the horseshoe crab Limulus polyphemus, both astacids and the priapulid exhibit the same inversion, which is therefore supposed to be a convergent event of the clade Astacidea and Priapulida among Ecdysozoa. Other than this notable feature observed in astacids, the gene arrangements in all available decapods show some interesting characters. To explain these unique genomic features observed here, a new gene rearrangement model is proposed, which is called the “inversion triggered duplication” model.
Briscoe, Andrew G. "Advancing mitogenomics : a case study in the Araneae." Thesis, Bangor University, 2013. https://research.bangor.ac.uk/portal/en/theses/advancing-mitogenomics--a-case-study-in-the-araneae(f642bbb7-75fa-49ea-a59d-23274019e8fa).html.
Повний текст джерелаTabata, Ryouichi. "The origin, history and mitogenome evolution of fishes in Lake Biwa." 京都大学 (Kyoto University), 2016. http://hdl.handle.net/2433/215345.
Повний текст джерелаVan, de Paer Céline. "Diversité structurelle et évolution contrastée des génomes cytoplasmiques des plantes à fleurs : une approche phylogénomique chez les Oleaceae." Thesis, Toulouse 3, 2017. http://www.theses.fr/2017TOU30228/document.
Повний текст джерелаIn plants, the structural dynamics and concerted evolution of nuclear and cytoplasmic genomes are poorly understood. The objective of this thesis was to study the structural diversity and evolution of mitogenomes and plastomes in the family Oleaceae with a phylogenomic approach. First, we assembled mitogenomes from low-coverage sequencing data obtained from live and herbarium material. Considerable structural variation of mitogenomes was observed in the olive, and a chimeric gene potentially associated to a type of male sterility was detected. Finally, we studied the evolution of plastomes and mitochondrial genes in the Oleaceae. Accelerated evolution of plastomes was observed in two independent lineages. This change of evolutionary rate could be the consequence of an occasional transmission of plastids with pollen, modifying selective pressures on some genes
Garbutt, James. "The complete mitogenome of two Australian lampreys: mordacia mordax and mordacia praecox." Thesis, Garbutt, James (2015) The complete mitogenome of two Australian lampreys: mordacia mordax and mordacia praecox. Honours thesis, Murdoch University, 2015. https://researchrepository.murdoch.edu.au/id/eprint/30595/.
Повний текст джерелаRodovalho, Cynara de Melo [UNESP]. "Caracterização do transcriptoma e genoma mitocondrial da formiga cortadeira Atta laevigata (Formicidae : Attini)." Universidade Estadual Paulista (UNESP), 2011. http://hdl.handle.net/11449/100531.
Повний текст джерелаCoordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)
Formigas cortadeiras do gênero Atta, popularmente conhecidas como saúvas, são as mais derivadas dentro da tribo Attini. Apresentam grande importância ecológica, porém, pelo hábito de cortarem folhas para manutenção do fungo simbionte e pelo enorme tamanho das colônias, causam muitos prejuízos às lavouras, pastagens e plantações, sendo consideradas pragas agrícolas. Atta laevigata Smith, 1858 apresenta vasta distribuição pelo Brasil e é responsável pela herbivoria de inúmeras plantas dicotiledôneas, gramíneas e espécies nativas de diferentes biomas. O presente trabalho teve como objetivos a caracterização parcial do transcriptoma e do genoma mitocondrial de A. laevigata. Foram caracterizadas 2006 sequências únicas do transcriptoma, a partir de uma biblioteca de cDNA preparada com indivíduos inteiros da formiga. Entre essas sequências, 16 provavelmente representam genes com grande número de transcritos. Esses 16 genes estão relacionados a três funções celulares: (i) conservação de energia através de reações redox na mitocôndria; (ii) estrutural, pelo citoesqueleto e músculos; (iii) regulação da expressão gênica e metabolismo. Considerando o estilo de vida e processos biológicos chaves para essas formigas, 146 sequências foram identificadas com base na sua utilização para o controle de cortadeiras pragas. A partir de dados da biblioteca de cDNA e procedimentos envolvendo primer walking, o genoma mitocondrial de A. laevigata foi parcialmente caracterizado, apresentandose com 17920 pb, maior, portanto, do que outros já descritos em Hymenoptera, mesmo considerando-se a impossibilidade de determinação da sequência de uma pequena porção do mtDNA, envolvendo a região controle, uma parte do 12S e os tRNAs S1, V e M. Como já descrito para outros mitogenomas, o de A. laevigata apresentou alto conteúdo AT, os mesmos 13 genes codificadores...
Leafcutter ants from Atta genus, popularly known as “saúvas”, are the most derived of the tribe Attini. They have major ecological importance, but, because of their habit of cutting leaves for the maintenance of the symbiotic fungus and the huge colony size, they impose severe economic damages to plantations, pastures, and agriculture, being considered as agriculture pests. Atta laevigata shows wide distribution in Brazil and it is responsible for the herbivory of many dicots, grass, and native species from different biomes. The present work aimed to characterize the transcriptome and the mitochondrial genome of A. laevigata. 2,006 unique sequences of the transcriptome were characterized from a cDNA library constructed with whole individuals. Among those sequences, 16 are likely from genes with high number of transcripts. Those 16 genes are related with three cellular functions: (i) energy conservation through redox reactions in mitochondria; (ii) cytoskeleton and muscle structuring; (iii) regulation of gene expression and metabolism. Based on lifestyle and key biological processes of these ants, 146 sequences were identified with potential use for controlling pest leafcutters. Using data from cDNA library and primer walking proceedings, the mitochondrial genome of A. laevigata was partially characterized with 17,920 bp, being larger than the others already described for Hymenoptera. A small part of the mtDNA was not sequenced, including the control region, a portion of 12S and tRNAs S1, V, and M. As described before for other mitogenomes, A. laevigata mtDNA displayed high AT contain, the same 13 proteincoding genes and the two ribosomal subunits with length and location according to the hypothetic ancestral mitogenome. Rearrangements were found for the tRNAs, but the most remarkable difference were the high number and longer length of intergenic regions presented in the mtDNA... (Complete abstract click electronic access below)
McCullagh, Bonnie. "Sequence evolution among divergent mitochondrial haplotypes within species of Junonia butterflies." Journal of Asia-Pacific Entomology, 2015. http://hdl.handle.net/1993/31105.
Повний текст джерелаFebruary 2016
Finnegan, Kimberly A. "A Mitogenomics View of the Population Structure and Evolutionary History of the Basking Shark Cetorhinus maximum." NSUWorks, 2014. http://nsuworks.nova.edu/occ_stuetd/13.
Повний текст джерелаShen, Hong [Verfasser], Gerhard [Akademischer Betreuer] Scholtz, Thomas [Akademischer Betreuer] Stach, and Lars [Akademischer Betreuer] Podsiadlowski. "Mitogenomic analysis of decapod phylogeny : (Crustacea, Malacostraca) / Hong Shen. Gutachter: Gerhard Scholtz ; Thomas Stach ; Lars Podsiadlowski." Berlin : Humboldt Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät I, 2012. http://d-nb.info/1022837559/34.
Повний текст джерелаROCHA, Patrícia Keytth Lins. "Qual região do DNA mitocondrial reflete a história evolutiva da ordem Lepidoptera?" Universidade Federal de Pernambuco, 2013. https://repositorio.ufpe.br/handle/123456789/13136.
Повний текст джерелаMade available in DSpace on 2015-04-14T15:05:53Z (GMT). No. of bitstreams: 2 Dissertação Patricia Rocha.pdf: 2020756 bytes, checksum: 96804531919a1d7e9cb5ab9787d73242 (MD5) license_rdf: 1232 bytes, checksum: 66e71c371cc565284e70f40736c94386 (MD5) Previous issue date: 2013
FACEPE
A ordem Lepidoptera apresenta uma gama de espécimes de importância econômica, algumas são agentes polinizadores e outras são pragas. Vários estudos têm sido realizados com base na morfologia com base em dados moleculares para elucidar a evolução da ordem. O DNA mitocondrial é muito utilizado por proporcionar boa resolução filogenética. Com base em genes mitocondriais informativos, nós propusemos um conjunto de dados que pode ser utilizado em análise filogenética de Lepidoptera obtendo a mesma robustez que a análise com mtDNAs completos. Para isso, as sequências dos mitogenomas de Lepidoptera foram recuperadas no banco de dados do NCBI. Foi identificada a ordem gênica das sequências utilizando o programa MAUVE. As regiões de interesse em D. flavipennella foram sequenciadas para testar a eficiência dos marcadores moleculares em sequência nova. Foi realizada análise de entropia, teste de sinal filogenético e de saturação para verificar características de bons marcadores moleculares e foram realizadas análises filogenéticas nos programas PhyML e MrBayes. Foram realizados também testes com e sem a terceira posição dos códons para verificar a influência da terceira posição nas análises filogenéticas de Lepidoptera. As regiões estudadas foram concatenadas para aumentar os valores de confiança das árvores. Verificamos que com a concatenação dos genes COI, ATP6, COIII, ND3, ND5, CYTB, ND1 e 16S foi possível obter resultados com robustez semelhante a dos mitogenomas completos.
Книги з теми "Mitogenomes"
Kulik, Tomasz, Anne D. Van Diepeningen, and Georg Hausner, eds. The Significance of Mitogenomics in Mycology. Frontiers Media SA, 2021. http://dx.doi.org/10.3389/978-2-88966-479-5.
Повний текст джерелаЧастини книг з теми "Mitogenomes"
Fortes, Gloria Gonzales, and Johanna L. A. Paijmans. "Analysis of Whole Mitogenomes from Ancient Samples." In Whole Genome Amplification, 179–95. New York, NY: Springer New York, 2015. http://dx.doi.org/10.1007/978-1-4939-2990-0_13.
Повний текст джерелаAlqahtani, Fahad, and Ion Măndoiu. "SMART2: Multi-library Statistical Mitogenome Assembly with Repeats." In Computational Advances in Bio and Medical Sciences, 184–98. Cham: Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-46165-2_15.
Повний текст джерелаBernt, Matthias, Daniel Merkle, and Martin Middendorf. "An Algorithm for Inferring Mitogenome Rearrangements in a Phylogenetic Tree." In Comparative Genomics, 143–57. Berlin, Heidelberg: Springer Berlin Heidelberg, 2008. http://dx.doi.org/10.1007/978-3-540-87989-3_11.
Повний текст джерелаLin, Runmao, Xinyue Cheng, and Bingyan Xie. "Comparative Analysis of Pochonia chlamydosporia Mitogenome Reveals Dynamic Mitochondrial Evolution of the Nematophagous Fungi in Hypocreales." In Perspectives in Sustainable Nematode Management Through Pochonia chlamydosporia Applications for Root and Rhizosphere Health, 183–95. Cham: Springer International Publishing, 2017. http://dx.doi.org/10.1007/978-3-319-59224-4_9.
Повний текст джерелаPisani, Davide, Robert Carton, Lahcen I. Campbell, Wasiu A. Akanni, Eoin Mulville, and Omar Rota-Stabelli. "An Overview of Arthropod Genomics, Mitogenomics, and the Evolutionary Origins of the Arthropod Proteome." In Arthropod Biology and Evolution, 41–61. Berlin, Heidelberg: Springer Berlin Heidelberg, 2013. http://dx.doi.org/10.1007/978-3-662-45798-6_3.
Повний текст джерелаBentur, Jagadish S., R. M. Sundaram, Satendra Kumar Mangrauthia, and Suresh Nair. "Molecular Approaches for Insect Pest Management in Rice." In Rice Improvement, 379–423. Cham: Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-66530-2_11.
Повний текст джерелаUreña, Irene, Silvia Guimarães, Simon J. M. Davis, Cleia Detry, Gülşah Merve Kılınç, Rute Da Fonseca, Nicolas Dussex, et al. "An Archaeogenetics Study of Cattle Bones from Seventeenth Century Carnide, Lisbon, Portugal." In Cattle and People, 169–79. Lockwood Press, 2022. http://dx.doi.org/10.5913/archbio04.08.
Повний текст джерелаCunha, Divino Bruno da, Luis Fernando da Silva Rodrigues‐Filho, and João Bráullio de Luna Sales. "A Review of the Mitogenomic Phylogeny of the Chondrichthyes." In Chondrichthyes - Multidisciplinary Approach. InTech, 2017. http://dx.doi.org/10.5772/intechopen.70028.
Повний текст джерелаGáspárdy, András. "Reality of Mitogenome Investigation in Preservation of Native Domestic Sheep Breeds." In Landraces - Traditional Variety and Natural Breed. IntechOpen, 2021. http://dx.doi.org/10.5772/intechopen.95768.
Повний текст джерелаMaár, Kitti, Gergely István Varga, Bence Kovács, Oszkár Schütz, Balázs Tihanyi, Emil Nyerki, István Raskó, et al. "A X-XI. századi Kárpát-medencei köznép anyai vonalainak jellemzése archeogenetikai módszerekkel." In A Magyarságkutató Intézet Évkönyve 2021, 281–309. Magyarságkutató Intézet, 2022. http://dx.doi.org/10.53644/mkie.2021.281.
Повний текст джерелаТези доповідей конференцій з теми "Mitogenomes"
Gillett, Conrad. "Weevil mitogenomics." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.94502.
Повний текст джерелаAlqahtani, Fahad, and Ion I. Mandoiu. "Statistical Mitogenome Assembly with Repeats." In 2018 IEEE 8th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS). IEEE, 2018. http://dx.doi.org/10.1109/iccabs.2018.8542062.
Повний текст джерелаYan, Liping. "A mitogenomic perspective on calyptrate phylogeny." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.109353.
Повний текст джерелаStraeuli, Rieze, and Barbara van Asch. "Mitogenomics and Phylogeny of Seven African Saturniidae (Lepidoptera)." In The 1st International Electronic Conference on Entomology. Basel, Switzerland: MDPI, 2021. http://dx.doi.org/10.3390/iece-10372.
Повний текст джерела"Mitogenomics and phylogenetics of vulnerable and endangered birds of genera Aratinga and Psittacus." In Bioinformatics of Genome Regulation and Structure/ Systems Biology. institute of cytology and genetics siberian branch of the russian academy of science, Novosibirsk State University, 2020. http://dx.doi.org/10.18699/bgrs/sb-2020-148.
Повний текст джерела"Assembling of the Siberian larch mitochondrial genome using long nucleotide sequence reads, the largest currently known mitogenome." In Plant Genetics, Genomics, Bioinformatics, and Biotechnology. Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, 2019. http://dx.doi.org/10.18699/plantgen2019-145.
Повний текст джерела