Дисертації з теми "MALDI-MS/MS"
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Lai-Rowcroft, Lindsay Ling Gi. "Novel surfaces for MALDI-MS." Thesis, University of Manchester, 2013. https://www.research.manchester.ac.uk/portal/en/theses/novel-surfaces-for-maldims(331dd97a-881e-4ed0-908f-d5947f3ebeba).html.
Повний текст джерелаLeander, Ellinor. "Artidentifiering av mögelsvamp med MALDI-TOF MS." Thesis, Linnéuniversitetet, Institutionen för kemi och biomedicin (KOB), 2018. http://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-80166.
Повний текст джерелаRapid and accurate species identification is crucial for successful treatment of fungal infections, especially among immunosuppressed patients. Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is used routinely at clinical laboratories to identify characteristic protein patterns of bacteria and yeast by the interpretation of protein spectra in a database for accurate species identification. The hard cell wall of the mold and the heterogeneous growth with varying protein expression due to maturation, complicates identification with MALDI-TOF MS. The potential benefits of this method compared to microscopy as traditional method are shortened turn-around times, safer species identification of more species that is independent on subjective morphological assessment. The purpose of the study was to investigate whether MALDI-TOF MS could be adapted and used for the identification of molds in clinical routine diagnostics. Four reference strains (Aspergillus niger, A.fumigatus, A.terreus, A.flavus) and a clinical isolate (A.terreus) were examined. The preparation methods (I) complete formic acid extraction, (II) direct application and (III) suspension in distilled water were used for analysis of spores and frontmycelium from younger and older mold cultures. Two different masspektradatabases for species identification were compared; routine database BDAL and the specialized mold database, Filamentous Fungi Library. Also the collecting technique of mold prior to analysis with MALDI-TOF MS was evaluated. Sometimes, the species identification improved after extraction of mold cultures, while in other cases direct application was sufficient. Cultures with a lot of spores tended to give slightly more species identifications in BDAL regardless of the age of cultures. Filamentous Fungi Library, in some cases, tended to improve the performance compared to BDAL for younger cultures. More studies are required to evaluate and optimize MALDI-TOF MS as a method of mold identification.
Jacksén, Johan. "Improved techniques for CE-MALDI-MS off-line coupling and MALDI-MS analysis of primarily hydrophobic proteins and peptides." Licentiate thesis, KTH, Chemistry, 2007. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-4599.
Повний текст джерелаDue to the hydrophobic nature of integral membrane proteins (IMP) they give rise to several difficulties concerning handling and analysis, which is not the case for the most water soluble proteins. New analysis methods are needed, where the insolubility problems of the hydrophobic proteins due to aggregation and adhesion are tackled. Those problems also affect digestion performance and equipment compatibility for the analysis.
Protocols for analysis and separation specified for IMP are presented in Paper I and III.
The instrumentation used in this work was capillary electrophoresis (CE) and matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS). Both instruments are suitable for peptide/proteins analysis.
In Paper I, protocols for a CE separation of bacteriorhodopsin (BR) peptides as model IMP peptides are established. Also, a partially automated manufacturing procedure of a concentration MALDI-target is presented, suitable for fractions from CE. The MS analysis detected 9 out of 10 cyanogen bromide (CNBr) digested BR peptides. A novel technique for the off-line integration of CE to MALDI-MS using a closed-open-closed system is presented in Paper II, where the open part is a microcanal functioning as a MALDI target window. Investigation of the microcanal electro-osmotic flow (EOF) properties and band broadening characteristics was performed. A protein separation was obtained and detected with MALDI-MS analysis in the microcanal. Different protein digestion methods were evaluated using BR in Paper III through MALDI-MS. Several digestion methods as well as MS media were investigated alongside different MALDI matrices. For example, matrices as the hydrophobic 2,6-dihydroxyacetophenone (DHAP) and 2-Hydroxy-3-methoxybenzoic acid (2H3MBA) or 2-Hydroxy-5-methoxybenzoic acid (2H5MBA) mixed with DHB, appeared to be promising matrices for analysis of BR.
Med anledning av integrala membranproteiners (IMP) hydrofoba egenskaper uppstår flera svårigheter vid hantering och analys av IMP, vilket inte är fallet för vattenlösliga proteiner. Nya analysmetoder krävs, som löser löslighetsproblemen för de hydrofoba proteinerna som tex flockning och adsorbtion. Dessa problem påverkar även klyvningsgrad och kompatibilitet med analysutrustningen.
I Artikel I och Artikel III presenteras protokoll för analys och separation specifikt för IMP. Instrumenteringen som har använts i detta arbete är kapillärelektrofores (CE) och matris-assisterad laserdesorptions-joniserings-masspektrometri (MALDI-MS). Båda instrumenten är lämpade för peptid/protein analyser.
I Artikel I, presenteras protokoll för en CE separation av peptider från bacteriorhodopsin (BR), som användes som modellpeptider för IMP. En delvis automatiserat tillverkningsprocedur för en koncentrerande MALDI-platta, som är anpassad för CE fraktionerna beskrivs också. MS-analysen detekterade 9 av 10 BR-peptider från cyanobromid-klyvning (CNBr). En ny teknik för off line-integrering av CE till MALDI-MS genom ett slutet-öppet-slutet system presenteras i Artikel II, där den öppna delen är en mikrokanal som fungerar som detektionsfönster i MALDI. Undersökning av mikrokanalens egenskaper som tex det elektroosmotiska flödet (EOF) och bandbreddningen utvärderades. En proteinseparation genomfördes och detekterades med MALDI–MS i mikrokanalen. Olika proteinklyvningsmetoder för BR undersöktes i Artikel III med MALDI-MS. Flera proteinklyvningsmetoder samt MS-medier utvärderades tillsammans med olika MALDI-matriser. Den hydrofoba matrisen 2,6-dihydroxyacetophenone (DHAP) och 2-Hydroxy-3-methoxybenzoic acid (2H3MBA) eller 2-Hydroxy-5-methoxybenzoic acid (2H5MBA) blandade med DHB, visade sig exempelvis vara lovande matriser för BR-analyser.
SQUEO, VALERIA. "Alterazioni del peptidoma serico di pazienti con tumore renale valutate tramite "label-free" (nLC-ESI-MS/MS) e "peptide profiling" (MALDI-MS/MS)." Doctoral thesis, Università degli Studi di Milano-Bicocca, 2013. http://hdl.handle.net/10281/43783.
Повний текст джерелаKempka, Martin. "Improved mass accuracy in MALDI-TOF-MS analysis." Licentiate thesis, Stockholm : Division of Analytical Chemistry, Royal Institute of Technology, 2005. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-313.
Повний текст джерелаKriegsmann, Mark. "MALDI MS Imaging zur Untersuchung von synovialem Gewebe." Doctoral thesis, Universitätsbibliothek Leipzig, 2013. http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-118897.
Повний текст джерелаHalgunset, Anders. "Typing av Legionella pneumophila med MALDI-TOF MS." Thesis, Norges teknisk-naturvitenskapelige universitet, Institutt for bioteknologi, 2012. http://urn.kb.se/resolve?urn=urn:nbn:no:ntnu:diva-24697.
Повний текст джерелаTrim, Paul James. "MALDI-MS imaging for direct drug distribution analysis." Thesis, Sheffield Hallam University, 2009. http://shura.shu.ac.uk/20455/.
Повний текст джерелаSun, Zhen. "Studies of Atmospheric Pressure Visible-Wavelength MALDI-MS." University of Toledo / OhioLINK, 2012. http://rave.ohiolink.edu/etdc/view?acc_num=toledo1333747638.
Повний текст джерелаSorensen, Christina M. "ESI-MS and MALDI-TOF-MS for the characterization and analysis of metallo-oligomers and proteins." Laramie, Wyo. : University of Wyoming, 2005. http://proquest.umi.com/pqdweb?did=1031044031&sid=4&Fmt=2&clientId=18949&RQT=309&VName=PQD.
Повний текст джерелаZhen, Liu [Verfasser]. "Novel approaches for quantitative analysis of small biomolecules in MALDI-MS and SALDI-MS / Liu Zhen." Saarbrücken : Saarländische Universitäts- und Landesbibliothek, 2020. http://d-nb.info/1219904481/34.
Повний текст джерелаBertilsson, Sarah. "Glycanmapping of glycoproteins with UPLC-FLR-MALDI/TOF-MS." Thesis, Uppsala universitet, Analytisk kemi, 2014. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-228040.
Повний текст джерелаDempwolf, Wibke. "MALDI-TOF in der kontrollierten radikalischen Polymerisation und Präpolymeranalyse." Clausthal-Zellerfeld Papierflieger, 2007. http://d-nb.info/990376834/04.
Повний текст джерелаCrank, Jeffrey Aaron. "Ionic liquids MALDI-MS matrices and gas chromatography stationary phases /." [Ames, Iowa : Iowa State University], 2009. http://gateway.proquest.com/openurl?url_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:dissertation&res_dat=xri:pqdiss&rft_dat=xri:pqdiss:3379180.
Повний текст джерелаSchumacher, Joshua. "Carbon Nanotube Enhanced MALDI MS: Increasing Sensitivity Through Sample Concentration." Scholar Commons, 2010. http://scholarcommons.usf.edu/etd/3595.
Повний текст джерелаWorster, Belinda Mary. "MALDI-TOF-MS and neuropeptide signalling in the nervous system." Thesis, University of Sussex, 1996. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.360682.
Повний текст джерелаBronzel, Júnior João Luiz [UNESP]. "Matrizes iônicas: detecção e quantificação de cianotoxinas por maldi-ms." Universidade Estadual Paulista (UNESP), 2015. http://hdl.handle.net/11449/143001.
Повний текст джерелаA técnica de ionização MALDI (Matrix-Assisted Laser Desorption/Ionization) foi uma das responsáveis por revolucionar a Espectrometria de Massas, tornando possível sua aplicação a moléculas termolábeis e de alta massa molecular, como as proteínas. Apesar de seu grande desenvolvimento, esta técnica ainda apresenta algumas limitações como a seleção da matriz utilizada e o método de preparo de amostras. Estes fatores são determinantes na reprodutibilidade da análise e na faixa de aplicação de m/z. Neste trabalho, inicialmente analisou-se diferentes linhagens de cianobactérias por MALDI-TOF-MS, com a finalidade de se buscar por novos analitos para os quais fosse possível o monitoramento utilizando-se as matrizes iônicas. Posteriormente avaliou-se as características destas matrizes, a metodologia de preparo de amostras, a composição do analito e a intensidade do laser da fonte de MALDI, com o objetivo de selecionar as melhores metodologias de análise. Após esta etapa, as matrizes iônicas e metodologias selecionadas foram aplicadas na detecção e quantificação de cianotoxinas e na análise de fármacos por MALDI-MS. Neste estudo obteve-se como resultados: a diferenciação de linhagens de cianobactérias através dos fingerprints obtidos por MALDI-TOF-MS que também permitiram a detecção de importantes metabólitos; a detecção da homoanatoxina-a, uma cianotoxina de baixa massa molecular, diretamente de células de cianobactérias; o desenvolvimento de um método quantitativo de análise de microcistinas com ótima precisão; e o desenvolvimento de uma metodologia inédita para a detecção dos componentes ativos de medicamentos, ampliando, portanto, o leque de aplicações da técnica de MALDI.
The Matrix-Assisted Laser Desorption/Ionization technique was one of the ionization sources responsible for revolutionizing Mass Spectrometry, making possible its application to labile and high molecular weight molecules, such as proteins. Despite its great development, this technique still has some limitations like the selection of the matrix and the sample preparation method. These factors determine the reproducibility of analysis and the m/z application range. Initially, in this work, we analyzed different cyanobacteria strains by MALDI-TOF-MS, in order to check for new analytes to be monitored using ionic matrices. Subsequently, the characteristics of these matrices, the sample preparation method, the composition of the analyte and laser intensity of the MALDI source were evaluated aiming to select the best methodologies of analysis. After this step, the selected ionic matrices and methodologies have been applied in the detection and quantification of cianotoxins and analysis of pharmaceutical drugs by MALDI-MS. In this study we obtained as results: the differentiation of strains of cyanobacteria through the fingerprints obtained by MALDI-TOF-MS which allowed the detection of important metabolites; the detection of homoanatoxin-a, a low molecular weight cyanotoxin, directly from cyanobacteria cells; the development of a quantitative method for the analysis of microcystins with great precision; and the development of a new methodology for the detection of active compounds of medicines, increasing, therefore, the application range of MALDI technique.
Bronzel, Júnior João Luiz. "Matrizes iônicas : detecção e quantificação de cianotoxinas por maldi-ms /." Araraquara, 2015. http://hdl.handle.net/11449/143001.
Повний текст джерелаBanca: Eduardo Maffud Cilli
Banca: José Augusto Rosário Rodrigues
Resumo: A técnica de ionização MALDI (Matrix-Assisted Laser Desorption/Ionization) foi uma das responsáveis por revolucionar a Espectrometria de Massas, tornando possível sua aplicação a moléculas termolábeis e de alta massa molecular, como as proteínas. Apesar de seu grande desenvolvimento, esta técnica ainda apresenta algumas limitações como a seleção da matriz utilizada e o método de preparo de amostras. Estes fatores são determinantes na reprodutibilidade da análise e na faixa de aplicação de m/z. Neste trabalho, inicialmente analisou-se diferentes linhagens de cianobactérias por MALDI-TOF-MS, com a finalidade de se buscar por novos analitos para os quais fosse possível o monitoramento utilizando-se as matrizes iônicas. Posteriormente avaliou-se as características destas matrizes, a metodologia de preparo de amostras, a composição do analito e a intensidade do laser da fonte de MALDI, com o objetivo de selecionar as melhores metodologias de análise. Após esta etapa, as matrizes iônicas e metodologias selecionadas foram aplicadas na detecção e quantificação de cianotoxinas e na análise de fármacos por MALDI-MS. Neste estudo obteve-se como resultados: a diferenciação de linhagens de cianobactérias através dos fingerprints obtidos por MALDI-TOF-MS que também permitiram a detecção de importantes metabólitos; a detecção da homoanatoxina-a, uma cianotoxina de baixa massa molecular, diretamente de células de cianobactérias; o desenvolvimento de um método quantitativo de análise de microcistinas com ótima precisão; e o desenvolvimento de uma metodologia inédita para a detecção dos componentes ativos de medicamentos, ampliando, portanto, o leque de aplicações da técnica de MALDI.
Abstract: The Matrix-Assisted Laser Desorption/Ionization technique was one of the ionization sources responsible for revolutionizing Mass Spectrometry, making possible its application to labile and high molecular weight molecules, such as proteins. Despite its great development, this technique still has some limitations like the selection of the matrix and the sample preparation method. These factors determine the reproducibility of analysis and the m/z application range. Initially, in this work, we analyzed different cyanobacteria strains by MALDI-TOF-MS, in order to check for new analytes to be monitored using ionic matrices. Subsequently, the characteristics of these matrices, the sample preparation method, the composition of the analyte and laser intensity of the MALDI source were evaluated aiming to select the best methodologies of analysis. After this step, the selected ionic matrices and methodologies have been applied in the detection and quantification of cianotoxins and analysis of pharmaceutical drugs by MALDI-MS. In this study we obtained as results: the differentiation of strains of cyanobacteria through the fingerprints obtained by MALDI-TOF-MS which allowed the detection of important metabolites; the detection of homoanatoxin-a, a low molecular weight cyanotoxin, directly from cyanobacteria cells; the development of a quantitative method for the analysis of microcystins with great precision; and the development of a new methodology for the detection of active compounds of medicines, increasing, therefore, the application range of MALDI technique.
Mestre
Earnshaw, Caroline Jane. "Sample preparation methodologies for MALDI-MS imaging and related topics." Thesis, Sheffield Hallam University, 2009. http://shura.shu.ac.uk/19590/.
Повний текст джерелаNiare, Sirama. "Identification du repas sanguin des moustiques par MALDI-TOF MS." Thesis, Aix-Marseille, 2017. http://www.theses.fr/2017AIXM0575/document.
Повний текст джерелаMALDI-TOF MS (Matrix Assisted, Laser Desorption/Ionization Time-Of-Flight Mass Spectrometry) is a proteomic technique that routinely used for microorganisms identification in clinical microbiology laboratory. Recently, the MALDI-TOF MS was successfully used as a innovative tool for arthropod identification. Thus, in this work we evaluated the MALDI-TOF MS to identify the blood meal sources from engorged mosquitoes. In the first part of our work, a bibliographical review was carried out on the different methods (serological, molecular biology) known in the trophic preference determination of hematophagous arthropods. The second part was optimization of the MALDI-TOF MS for identifying the origin of the blood meal of mosquitoes. For optimization, the Anopheles gambiae Giles and Aedes albopictus were artificially fed on several vertebrate hosts blood using the Hemotek device for two hours under standard conditions. Our results showed intra-species reproducibility and inter-species specificity of MS spectra from mosquitoes engorged on the same or different vertebrate hosts. The MS spectra querying against the database reveal a correct identification of the the blood meal origin from the specimens collected less than 24 hours post-feeding. For field samples, MALDI-TOF MS allowed to detect the mosquitoes blood meal fed on wide variety of domestic hosts. Consequently the MALDI-TOF MS technique would be an effective tool for epidemiological surveys of vector-borne diseases and the identification of the trophic preference of mosquito freshly engorged
Hamburg, Daisy-Malloy. "Biochemical and MALDI-MS methods for characterization of ribosomal proteins." Cincinnati, Ohio : University of Cincinnati, 2008. http://rave.ohiolink.edu/etdc/view.cgi?acc_num=ucin1204305343.
Повний текст джерелаAdvisor: Patrick Limbach. Title from electronic thesis title page (viewed Apr. 23, 2009). Keywords: MALDI-MS; ribosome; ribosomal proteins. Includes abstract. Includes bibliographical references.
Mitrovic, Bojan. "DEVELOPMENT OF IONIC POLYMER NANOBRUSHES WITH APPLICATION IN MALDI-MS." OpenSIUC, 2014. https://opensiuc.lib.siu.edu/dissertations/838.
Повний текст джерелаGhebreamlak, Weyni. "Identification of Trypsin Digested Transferrin using HPLC and MALDI-MS." Thesis, KTH, Skolan för kemi, bioteknologi och hälsa (CBH), 2019. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-266157.
Повний текст джерелаI detta projekt har separation av trypsin-klyvt transferrin (Tf) studerats, med användning av ett RP HPLC-UV system, som bestod av en C18 kolonn. 0,1% TFA/MQ-vatten och 90% MeOH användes som mobilfas A respektive mobilfas B. Av ekonomiska skäl användes proteinet cytokrom c (cyt-C) före analys av Tf för att optimera klyvningsprocessen och LC systemet. Fyra klyvningsmetoder studerades för analysering av cyt-C och Tf. Den första metoden innehöll inget denaturerande, reducerande eller alkylerande medel. De andra klyvningsmetoderna innehöll urea eller värme som denaturerande medel, och slutligen ditiotreitol (DTT) och jodacetamid (IAA) som reducerande respektive alkylerande medel. Resultaten från HPLC-UV visade att en gradienteluering med en hög koncentration av den organiska lösningen är gynnsam för separationen av peptiderna från cyt-C. MALDI-MS användes för att identifiera peptiderna, och resultaten visade att denaturering med värme före klyvning gav bäst resultat.
Müller, Lukáš. "Analýza proteomu piva pomocí hmotnostní spektrometrie." Master's thesis, Vysoké učení technické v Brně. Fakulta chemická, 2009. http://www.nusl.cz/ntk/nusl-216454.
Повний текст джерелаLuizete, Milena Fontes. "Aplicações de MALDI-MS na análise de peptídeos produzidos por cianobactérias /." Araraquara, 2017. http://hdl.handle.net/11449/151215.
Повний текст джерелаBanca: Saulo Santesso Garrido
Banca: Dulce Helena Siqueira Silva
Banca: Moacir Rossi Forin
Banca: João Henrique Ghilardi Lago
Resumo: Neste trabalho, a técnica Matrix Assisted Laser Dersoption/Ionization - Mass Spectrometry (MALDI-MS) foi utilizada em diferentes aplicações para a análise de peptídeos produzidos por cianobactérias. Esta técnica é extremamente rápida, possui alta resolução, requer pouquíssimo preparo de amostra e não permite que possíveis contaminantes presentes na amostra interfiram na análise. Por estes motivos MALDI- MS tem sido amplamente utilizada não somente na detecção de diferentes variantes de cianopeptídeos, mas também para quantificação das cianotoxinas. Este trabalho utilizou um sistema binário de matriz para a quantificação de microcistinas, utilizando as matrizes ácido α-ciano-4-hidroxicinamico e o ácido sinapínico (50/50, v/v) para obter uma mistura homogênea de matriz/analito, superando a baixa reprodutibilidade inerente da técnica MALDI-MS. Paralelamente, foi realizado o imageamento de espécies de cianobactérias de água doce cultivadas em meio sólido por MALDI-TOF-MS. Os resultados obtidos apresentaram novas perspectivas com relação à distribuição espacial dos peptídeos produzidos pelas espécies de cianobactérias estudadas, como a nodularina-R (m/z 825) e nodularina-[Har] (m/z 839) produzida pela espécie Nodularia harveyana PCC 7804, os peptídeos MC-LR (m/z 995) produzidos pela espécie Microcystis aeruginosa PCC 7820, e o sideróforo anaquelina (m/z 761.3) produzidos pela espécie Anabaena Cylindrica PCC 7122. Além disto, amostras da floração de cianobactérias, que ocorre na ... (Resumo completo, clicar acesso eletrônico abaixo)
Abstract: In this work, the technique Matrix Assisted Laser Dersoption/Ionization - Mass Spectrometry (MALDI-MS) were used in different application for analysis of peptides produces by cyanobacteria. This technique is extremely fast, has high resolution, requires very little sample preparation and does not allow any contaminants present in the sample to interfere with the analysis. For these reasons, MALDI-MS has been widely used not only in the detection of different variants of cyanopeptides, but also for the quantification of cyanotoxins. This work utilized a matrix binary system for the quantification of microcystins, using the α-cyano-4-hydroxynamic matrix and sinapinic acid (50/20, v/v) to obtain a homogeneous matrix/analyte mixture, overcoming the low reproducibility inherent to the MALDI-MS technique. Simultaneously, we performed the imaging of freshwater cyanobacteria cultivated in solid medium by MALDI-TOF-MS. The results obtained presented new perspectives regarding the spatial distribution of the peptides produced by the studied cyanobacteria species, for exemple the nodularin-R (m/z 825), nodularin-[Har] (m/z 839) for the species Nodularia harveyana PCC 7804, MC-LR peptides (m/z 995) for the species Microcystis aeruginosa PCC 7820, and the siderophore anaquelin (m/z 761.3) for the species Anabaena cylindrica PCC 7122. In addition, samples of cianobacteria's bloom, present in Salto Grande Lagoon, located in Americana-SP, were analyzed and were identified some peptides, being four microcystins (MC-YR, MC-YR, MC-Hil and MC-RR), four aeruginosins (602, 298 A, 644 and 968), two cyanopeptolins (972 and 986), and one variant of microviridin(1707) ... (Full abstract, click on electronic access below).
Doutor
Bunch, Josephine. "Detection and imaging of pharmaceutical compounds in skin by MALDI-MS." Thesis, Sheffield Hallam University, 2005. http://shura.shu.ac.uk/19408/.
Повний текст джерелаAL-Jabiry, Ekram. "Syntetisering av en ny MALDI-MS matris med användning av Suzukikopplingsreaktion." Thesis, Uppsala universitet, Institutionen för läkemedelskemi, 2021. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-444539.
Повний текст джерелаChen, Shuo. "MALDI-TOF MS data processing using wavelets, splines and clustering techniques." [Johnson City, Tenn. : East Tennessee State University], 2004. http://etd-submit.etsu.edu/etd/theses/available/etd-1112104-113123/unrestricted/ChenS121404f.pdf.
Повний текст джерелаTitle from electronic submission form. ETSU ETD database URN: etd-1112104-113123 Includes bibliographical references. Also available via Internet at the UMI web site.
Hamdi, Cassandra. "Clostridium difficile : Rapid typing Clostridium difficile using MALDI-TOF MS analysis." Thesis, Högskolan i Skövde, Institutionen för biovetenskap, 2019. http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-17659.
Повний текст джерелаBallade, Tosco Armelle. "Identification et caractérisation par spectrométrie de masse de substances à activités biologiques produites par des souches de BacillusS." Thesis, Bordeaux 1, 2011. http://www.theses.fr/2011BOR14240.
Повний текст джерелаCompounds produced by Bacillus bacteria present a major interest because of their biological activities. The aim of this work was to develop a reliable analytical methodology to extract these compounds, and to characterize them by mass spectrometry and by their biological activities. A first approach by MALDI-ToF mass spectrometry doesn’t give satisfactory results because of strong spectral suppression effects. Therefore, we have designed a second strategy which combined two analytical technologies. First, compounds and lipopeptides families were separated by analytical liquid chromatography and analysed by ESI-IT. Then, collected fractions were characterized by MALDI-Q-ToF (and ESI-Q-ToF) in order to determine accurate mass measurements and obtain complementary product ion spectra. This process led us to establish identification criteria of compounds and lipopeptides families which have known structures. This characterization is based of retention times in chromatography, accrurate mass measurements and fragmentation schemes. We have achieved the same experiments with non identified compounds and then assessed their biological activity by agar well diffusion test.This strategy allows to obtain a screening of whole of the biomolecules produced by bacillus strains and establishes a link between structure and biological activity. This methodology, designed for cultures in liquid medium, was then adapted to cultures in Petri disches in order to analyse compounds producted at the bacterial colony scale
PENG, LIJUAN. "MATRIX-ASSISTED LASER DESORPTION/IONIZATION (MALDI) TARGET MODIFICATION FOR ENHANCED PROTEOMICS ANALYSIS AND PLASMA POLYMER CHARACTERIZATION BY MALDI MASS SPECTROMETRY." OpenSIUC, 2010. https://opensiuc.lib.siu.edu/dissertations/207.
Повний текст джерелаShenar, Nawar. "Spectrométrie de masse par désorption/ionisation laser de peptides modèles : applications en protéomique." Montpellier 2, 2008. http://www.theses.fr/2008MON20150.
Повний текст джерелаJemmali, Zaïneb. "Développements méthodologiques en TLC/MALDITOF MS et GC/MS pour l’analyse des composés terpénoïdes présents dans les résines végétales." Thesis, Orléans, 2016. http://www.theses.fr/2016ORLE2061/document.
Повний текст джерелаResins are hydrocarbon secretions of many plants and well known for their protective benefits. They have been used as raw materials for a wide range of applications (pharmaceutic, cosmetic and artistic). Plant resins are complex mixtures of organic substances mainly terpenoid compounds which constitute the most abundant and structurally diverse group of plant secondary metabolites. The chemical characterization of this material results in long and difficult separation due to the wide range of polarity and volatility of its constituents. The aim of this work was to develop new analytical approaches to improve the identification of resins certifying their origin and ensuring the quality control. For that purpose two analytical methods were selected: TLC and GC approaches hyphenated to mass spectrometry. TLC-1D and TLC-2D allow a rapid screening and first visual differences of resins. The innovating TLC coupling to MALDI-TOF-MS gives a clear identification of major markers (triterpenic acids). In order to have complementary information about the composition of resins, a gas chromatography-mass spectrometry (GC-MS) method was developed to analyze volatile to non-volatile compounds. The various stages of optimization were based on experimental design and statistical (PCA and HAC) approaches. For closely related resins, a quantitative approach was investigated based on a complete validation for major markers. This work allows the development of two complementary techniques that give a powerful approach for fast and reliable differentiation of various resins even the closest ones
Elvingson, Ebba. "Art- och genusbestämning av bakterier direkt från blododlingar med MALDI-TOF MS." Thesis, Linnéuniversitetet, Institutionen för kemi och biomedicin (KOB), 2014. http://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-36355.
Повний текст джерелаLiti, Samone. "Evaluation of sample preparation techniques for MALDI-TOF-MS analysis of oligosaccharides." Thesis, Uppsala universitet, Avdelningen för analytisk farmaceutisk kemi, 2016. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-277957.
Повний текст джерелаHart, Philippa Jayne. "MALDI-MS investigation of skin and its response to irritants and sensitisers." Thesis, Sheffield Hallam University, 2012. http://shura.shu.ac.uk/20695/.
Повний текст джерелаYe, LiYun. "Characterization of A-type Proanthocyanidins in Peanut Skins Using MALDI-TOF MS." Diss., Virginia Tech, 2015. http://hdl.handle.net/10919/72283.
Повний текст джерелаPh. D.
Tummala, Manorama. "Surfactant-Aided Matrix Assisted Laser Desorption/Ionization Mass Spectrometry (SA-MALDI MS)." University of Cincinnati / OhioLINK, 2004. http://rave.ohiolink.edu/etdc/view?acc_num=ucin1100672049.
Повний текст джерелаNakano, Satoshi. "Development and evaluation of MALDI-TOF MS-based serotyping for Streptococcus pneumoniae." Kyoto University, 2016. http://hdl.handle.net/2433/215402.
Повний текст джерелаNorrman, Cassandra. "Validering av online databas för identifiering av svamp med MALDI-TOF MS." Thesis, Umeå universitet, Biomedicinsk laboratorievetenskap, 2019. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-160083.
Повний текст джерелаMarques, Lygia de Azevedo. "Aplicação de tecnicas avançadas de espectrometria de massas em ciencias de alimentos e perfumaria." [s.n.], 2006. http://repositorio.unicamp.br/jspui/handle/REPOSIP/248689.
Повний текст джерелаDissertação (mestrado) - Universidade Estadual de Campinas, Instituto de Quimica
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Resumo: Neste trabalho aplicamos técnicas avançadas de espectrometria de massas, (MALDI-TOF e ESI-MS) na análise de micotoxinas em alimentos e na tipificação e verificação de fraudes em perfumes. Aplicamos a técnica MALDI-TOF em análises de micotoxinas, e esta mostrou excelente desempenho nas análises de aflatoxinas e ocratoxina e vantagem sobre a técnica de escolha atual, o método ELISA. Esta vantagem é principalmente maior especificidade através de maior exatidão em medidas de massas e, portanto, maior confiabilidade. O Planejamento de experimento foi uma ferramenta valiosa para obtenção das melhores condições e estudo dos parâmetros de interferência. O limite de detecção encontrado para a técnica foi da ordem de 25 pg para aflatoxinas e de 1 ng para ocratoxina, com perspectiva de melhoria através de aumento da massa amostral em estudos futuros para adaptação da metodologia de extração na matriz de interesse à técnica MALDI-TOF. A técnica ESI-MS foi utilizada para a tipificação e detecção de perfumes proporcionando, através da análise de componentes principais (PCA), a diferenciação com segurança entre perfumes originais, falsos e inspirados, utilizando como indicadores componentes polares não majoritários característicos de cada categoria avaliada. Este estudo abre caminho para que esta técnica seja utilizada na avaliação de perfumes que estão sob suspeita de falsificação com auxilio de uma biblioteca de "fingerprint" de perfumes por ESI-MS. O emprego da técnica de MALDI-TOF também é uma opção vantajosa para o monitoramento da qualidade de grãos quanto a presença de toxinas indesejáveis, bem como ameaças de bioterrorismo.
Abstract: In this work we applied advanced mass spectrometry techniques (MALDI-TOF and ESI-MS) to micotoxin analysis in food and for the typification and detection of counterfeit perfumes. MALDI-TOF was applied to micotoxin analysis, which showed excellent performance for the analysis of aflatoxins and ochratoxin with advantage over the current technique of choice, the ELISA method. This advantage is mainly its greater specifity due the exactness of the measurements, therefore with higher reliability. The surface analysis was a valuable tool to attain the best conditions and study the interference of several parameters. The detection limit found for the technique was 25 pg for aflatoxins and 1 ng for ochratoxins, with perspective of improvement through increase of the sample mass in future studies for adaptation of the methodology of extration in the matrix of interest for the MALDI-TOF technique. The ESI-MS technique was used for typification and detection of counterfeit perfumes, providing, through principal component analysis (PCA), the characterization of original, counterfeit and inspired perfumes, using as minoritarian polar compounds as diagnostic ions of each perfume category evaluated. We envisage that the method can be used to establish a ESI-MS fingerprinting library of perfumes for comparison with those from samples under investigation, and that such a library could be updated constantly by the addition of ESI-MS of new perfumes even before they are commercially released. MALDI-TOF technique is also an advantageous option for the monitoring of crop quality relating to the presence of undesirable toxins, as well as bioterrorism threats by micotoxin poisoning.
Mestrado
Quimica Analitica
Mestre em Química
Rivas, Becerra Daniel. "Aplicación de MALDI-TOF Imaging y HPLC-MS/MS al estudio de la degradación del polímero policaprolactonadiol en diferentes medios acuáticos." Doctoral thesis, Universitat Politècnica de Catalunya, 2017. http://hdl.handle.net/10803/461713.
Повний текст джерелаEl agua es esencial para la vida y las actividades del ser humano y de los ecosistemas. El cambio global climático junto al incremento constante de población hace que el desequilibrio entre la demanda de agua y los recursos hídricos disponibles se incremente. Todo ello redunda en un impacto creciente sobre la salud humana y los ecosistemas acuáticos. La caracterización de los sistemas acuáticos incluye tanto aspectos estructurales como funcionales. Entre estos últimos hay que destacar la degradación de la materia orgánica, tanto natural como de origen antropogénico. La ecología de sistemas acuáticos utiliza la pérdida de peso de soportes orgánicos naturales como hojas secas o fragmentos de madera estandarizados expuestos al medio para calcular la pérdida de materia orgánica. Partiendo de esta idea el objetivo principal de esta tesis ha sido introducir más conocimiento químico dentro de la ecología de ríos utilizando una sonda basada en material sintético para estudiar su degradación en ambientes acuáticos, tanto naturales como ingenieriles. El dispositivo contiene un polímero comercial, el cual después de estar expuesto un tiempo en diferentes entornos acuáticos se recoge y se analiza su degradación utilizando técnicas avanzadas de espectrometría de masas, como son HPLC-MS, MALDI-TOF/MS y MALDI IMAGING. El capítulo 1 (Introducción) está dividido en tres partes. En la primera se presenta la problemática asociada a la calidad del medio acuático, sus efectos sobre los ecosistemas y se describen sucintamente los procesos bióticos y abióticos de degradación de la materia orgánica y su aplicación en las EDAR. En la segunda parte se realiza una breve descripción de los polímeros, sus usos y degradación, así como las técnicas analíticas que se usan para caracterizarlos. En la tercera parte, se describen las técnicas analíticas de espectrometría de masas empleadas en esta tesis, haciendo énfasis en aquellas que permiten el estudio espacial en dos dimensiones, mediante la correspondiente generación de imágenes (IMAGING). Los objetivos principales de la tesis se detallan en el capítulo 2. En el capítulo 3 se describe la selección de posibles polímeros a utilizar, así como la optimización de los correspondientes métodos de análisis mediante MALDI-TOF/MS. Con el polímero finalmente elegido (policaprolactonadiol 1250) se prepararon sondas poliméricas y se realizaron experimentos de exposición en diversos puntos del río Ebro. Los resultados obtenidos evidenciaron diferentes tipos de degradación. Finalmente, éstos se compararon con los obtenidos en paralelo mediante métodos clásicos, empleando hojas de árbol. Con el polímero seleccionado se realizaron experimentos a escala de laboratorio, que se describen en el capítulo 4, consistentes en la exposición de muestras de polímero durante un tiempo concreto en sistemas acuosos en condiciones estériles, aeróbicas y desnitrificantes. El uso de la novedosa técnica MALDI IMAGING, permitió observar diferencias de degradación a lo largo de la superficie de la muestra entre los tres tipos de condiciones ensayadas, obteniendo imágenes de los iones más interesantes. Así mismo, el tratamiento estadístico de los resultados obtenidos confirmó las imágenes adquiridas. El éxito del experimento anterior a escala de laboratorio, impulsó llevarlo al siguiente nivel y aplicarlo en muestras de aguas residuales. Así pues, las sondas de polímero se instalaron en el reactor secundario de la EDAR del Prat de Llobregat, donde se realiza un tratamiento de nitrificación (aerobio) y uno de desnitrificación (anaerobio). Para analizar las muestras se utilizó la técnica MALDI IMAGING y HPLC-MS para elucidar las estructuras de los compuestos de degradación y establecer los mecanismos de degradación correspondientes productos de transformación en función de las condiciones estudiadas. Finalmente en el capítulo 6 se comenta la discusión general de cada experimento realizado extrayéndose unas conclusiones finales.
Matajira, Carlos Emilio Cabrera. "Identificação de estirpes do gênero Streptococcus pela técnica de reação em cadeia da polimerase (PCR) e espectrometria de massa MALDI-TOF." Universidade de São Paulo, 2015. http://www.teses.usp.br/teses/disponiveis/10/10134/tde-27102015-082622/.
Повний текст джерелаTraditional microbiological methods such as isolation, Gram staining and biochemical tests help to identify the Streptococcus genus, however, the species present broad phenotypic variation, making it difficult for their identification or even differentiation just by these methods. One of the most important species in swine, Streptococcus suis, has led to great losses worldwide and has been described as an important zoonosis in some countries. S. suis is present in the upper airways, especially colonizing tonsils, oral and nasal cavities facilitating the high dissemination by direct contact, especially among piglets between 4 to 12 weeks of age. The most common clinical manifestations in pigs infected by S. suis are meningitis, arthritis and pneumonia. The aim of this study was to identify Streptococcus strains by polymerase chain reaction (PCR), 16S rRNA gene partial sequencing and MALDI-TOF mass spectrometry (MALDI-TOF MS). PCR and MALDI-TOF MS analysis resulted in the identification of 215 strains as S. suis and 35 as different species of the Streptococcus genus. The identification of the 35 strains belonging to other species of the genus by MALDI-TOF MS was confirmed by 16S rRNA gene partial sequencing, and both techniques presented 100% concordance. These results demonstrate the high efficiency in the use of the evaluated techniques for the identification of S. suis and the other species of the Streptococcus genus. The MALDI-TOF MS technique, despite the equipment high cost, presented the advantage of being fast, have low cost per analysis and reduced material usage
Kirmess, Kristopher Michael. "Investigation of Primary Ion Formation Mechanisms in UV-MALDI-MS Using Excited State Dynamics of Common MALDI Matrices." OpenSIUC, 2015. https://opensiuc.lib.siu.edu/dissertations/1110.
Повний текст джерелаLyrio, Tenorio Correia Carolina. "Le marquage des peptides avec des métaux et détection par MS et l'optimisation des procédures de l'extraction de métalloprotéin dans les échantillons biologiques à des fins de protéomique." Thesis, Pau, 2014. http://www.theses.fr/2014PAUU3008/document.
Повний текст джерелаThis work developed a new method for the identification and quantification of peptides, by optimizing some of the available strategies suitable for labeling peptides with lanthanide metals with subsequent separation by nano-HPLC with UV detection, matrix-assisted laser desorption ionization-mass spectrometry (MALDI MS). First, peptides were labeled with the three different lanthanide metals using a functional DOTA-based reagent. The results demonstrate that the derivatization reaction using the chelating reagent DOTA-NHS-ester was effective for single peptides and peptide mixtures, verified from the m/z relation obtained by MALDI MS. The application of the optimized method in a more complex matrix (Cytochrome C digest) showed results comparable to those obtained with model peptides. In parallel, environmental analyses were conducted, by performing the standardization of metalloprotein purification in fish bile, since this matrix has been reported as a biomarker for environmental metal contamination. Different procedures (varying centrifugation times and heat-treatment temperatures) and reducing agents (DTT, β-mercaptoethanol and TCEP) were applied to purify MT isolated from fish (Oreochromis niloticus) bile and liver. Spectrophotometrical analyses were used to quantify the resulting MT samples, and SDS-PAGE gels were used to qualitatively assess the different procedure results. Each procedure was then statistically evaluated. A response surface methodology was applied for bile samples, in order to further evaluate the responses for this matrix. In an environmental context, biliary MT was lower than liver MT, and, bile MT seems to be more adequate in environmental monitoring scopes regarding recent exposure to xenobiotics that may affect the proteomic and metalloproteomic expression of this biological matrix. A procedure for exposure to metals in the laboratory showed that some metals are significantly important for the assessment of contamination from the quantification of MT, according to the data processing by atifical neural network (ANN)
Motari, Edwin Mwamba. "Structural Studies of Oligosaccharides Attached to Proteins Expressed in Different Organisms and PEGylation of a non-Glycosylated Protein." The Ohio State University, 2010. http://rave.ohiolink.edu/etdc/view?acc_num=osu1274803162.
Повний текст джерелаJacksén, Johan. "Improved techniques for CE and MALDI-MS including microfluidic hyphenations foranalysis of biomolecules." Doctoral thesis, KTH, Analytisk kemi, 2011. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-27342.
Повний текст джерелаQC 20101214
Mello, Rodrigo Ventura de. "Aplicação de MALDI-TOF MS na caracterização de microalgas da família Selenastraceae (Chlorophyta)." Universidade Federal de São Carlos, 2016. https://repositorio.ufscar.br/handle/ufscar/8748.
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Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)
Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
The morphological variability in the Selenastraceae family has been a barrier to a good establishment of well-defined taxonomic groups. Several studies with molecular compounds have already demonstrated its importance in the elucidation of this relation. In this scenario, the present study used a matrix-assisted laser desorption ionization timeof- flight mass-spectrometry (MALDI-TOF MS) technique as a tool to differentiation of the microalgae of this family at the species and strains levels. A group of 18 strains, belong to in 12 different species, of freshwater microalgae was selected. Cells and dissolved organic matter (DOM) were analyzed in the middle exponential growth phase. The analyzes were performed in two different mass ranges: 400 to 2,000 Da and 2,000 to 20,000 Da. Each strain that yielded unique spectra with a good resolution of peaks and reproducibility was selected for clusters analyzes. These spectra were used to make a dissimilarity analysis that showed the capability of differentiation of the strains and species. The strains of the genera Monoraphidium were not all grouped, possibly because it is a polyphyletic group. The praticity and quickness of this technique for data acquisition, allied with the low cost of the analysis, are factors that favor its application in taxonomic studies.
A baixa variedade morfológica presente na família Selenastraceae tem sido uma barreira para o estabelecimento de grupos taxonômicos bem definidos. Estudos realizados com diversos marcadores moleculares já demonstraram a importância dos compostos produzidos por esses organismos na elucidação dessas relações. Nesse cenário, o presente estudo buscou avaliar a aplicação da espectrometria de massa por MALDI-TOF como ferramenta para a discriminação de cepas e espécies dessa família. Foram selecionadas 18 cepas, classificadas em 12 espécies diferentes, de microalgas de água doce. As células e a matéria orgânica dissolvida (MOD) analisadas foram amostradas de cultivos no meio da fase exponencial de crescimento. As análises foram feitas em duas extensões de massa: massas baixas (400 – 2000 Da) e massas altas (2 – 20 kDa). Para cada tipo de análise foram selecionadas as cepas que renderam espectros com boa resolução de picos. Esses espectros foram então utilizados em análises de dissimilaridade para a elaboração de dendrogramas, evidenciando a capacidade da técnica para a distinção de cepas e espécies. Apesar das cepas do gênero Monoraphidium não ficarem todas agrupadas, o que possivelmente ocorre devido ao fato do grupo ser polifilético. A grande rapidez e praticidade desta técnica para a obtenção de dados, aliado ao baixo custo das análises, são fatores que favorecem a sua aplicação neste tipo de estudo.
Sauerbrey, Kerstin. "Möglichkeiten und Grenzen der Mastitisdiagnostik mittels MALDI-TOF MS-Analytik und molekularbiologischen Methoden." Diss., Ludwig-Maximilians-Universität München, 2015. http://nbn-resolving.de/urn:nbn:de:bvb:19-179910.
Повний текст джерелаOlsson, Linnea. "Detection of synergistic activity of antibiotics in Klebsiella pneumoniae using MALDI-TOF MS." Thesis, Örebro universitet, Institutionen för hälsovetenskap och medicin, 2015. http://urn.kb.se/resolve?urn=urn:nbn:se:oru:diva-45032.
Повний текст джерела