Добірка наукової літератури з теми "DArT-seq"
Оформте джерело за APA, MLA, Chicago, Harvard та іншими стилями
Ознайомтеся зі списками актуальних статей, книг, дисертацій, тез та інших наукових джерел на тему "DArT-seq".
Біля кожної праці в переліку літератури доступна кнопка «Додати до бібліографії». Скористайтеся нею – і ми автоматично оформимо бібліографічне посилання на обрану працю в потрібному вам стилі цитування: APA, MLA, «Гарвард», «Чикаго», «Ванкувер» тощо.
Також ви можете завантажити повний текст наукової публікації у форматі «.pdf» та прочитати онлайн анотацію до роботи, якщо відповідні параметри наявні в метаданих.
Статті в журналах з теми "DArT-seq"
Meyer, Kate D. "DART-seq: an antibody-free method for global m6A detection." Nature Methods 16, no. 12 (September 23, 2019): 1275–80. http://dx.doi.org/10.1038/s41592-019-0570-0.
Повний текст джерелаMostert, Diane, Emmanuel Wicker, Mignon M. de Jager, Saif M. Al Kaabi, Wayne T. O’Neill, Suzy Perry, Chunyu Li, et al. "A Polyphasic Approach Reveals Novel Genotypes and Updates the Genetic Structure of the Banana Fusarium Wilt Pathogen." Microorganisms 10, no. 2 (January 25, 2022): 269. http://dx.doi.org/10.3390/microorganisms10020269.
Повний текст джерелаZiems, Laura A., Lee T. Hickey, Gregory J. Platz, Jerome D. Franckowiak, Peter M. Dracatos, Davinder Singh, and Robert F. Park. "Characterization of Rph24: A Gene Conferring Adult Plant Resistance to Puccinia hordei in Barley." Phytopathology® 107, no. 7 (July 2017): 834–41. http://dx.doi.org/10.1094/phyto-08-16-0295-r.
Повний текст джерелаLin, Hsin-Nan, and Wen-Lian Hsu. "DART: a fast and accurate RNA-seq mapper with a partitioning strategy." Bioinformatics 34, no. 2 (September 5, 2017): 190–97. http://dx.doi.org/10.1093/bioinformatics/btx558.
Повний текст джерелаRen, Y., R. P. Singh, B. R. Basnet, C. X. Lan, J. Huerta-Espino, E. S. Lagudah, and L. J. Ponce-Molina. "Identification and Mapping of Adult Plant Resistance Loci to Leaf Rust and Stripe Rust in Common Wheat Cultivar Kundan." Plant Disease 101, no. 3 (March 2017): 456–63. http://dx.doi.org/10.1094/pdis-06-16-0890-re.
Повний текст джерелаBoczkowska, Maja, Katarzyna Bączek, Olga Kosakowska, Anna Rucińska, Wiesław Podyma, and Zenon Węglarz. "Genome-Wide Diversity Analysis of Valeriana officinalis L. Using DArT-seq Derived SNP Markers." Agronomy 10, no. 9 (September 7, 2020): 1346. http://dx.doi.org/10.3390/agronomy10091346.
Повний текст джерелаDadjo, Colombe, Aggrey B. Nyende, Nasser Yao, Ngeno Kiplangat, and Achille E. Assogbadjo. "Genome-wide genetic diversity and population structure of Garcinia kola (Heckel) in Benin using DArT-Seq technology." PLOS ONE 15, no. 9 (September 23, 2020): e0238984. http://dx.doi.org/10.1371/journal.pone.0238984.
Повний текст джерелаVu, Sang V., Cedric Gondro, Ngoc T. H. Nguyen, Arthur R. Gilmour, Rick Tearle, Wayne Knibb, Michael Dove, In Van Vu, Le Duy Khuong, and Wayne O’Connor. "Prediction Accuracies of Genomic Selection for Nine Commercially Important Traits in the Portuguese Oyster (Crassostrea angulata) Using DArT-Seq Technology." Genes 12, no. 2 (February 1, 2021): 210. http://dx.doi.org/10.3390/genes12020210.
Повний текст джерелаShams, Foyez, Fiona Dyer, Ross Thompson, Richard P. Duncan, Jason D. Thiem, Andrzej Kilian, and Tariq Ezaz. "Application of DArT seq derived SNP tags for comparative genome analysis in fishes; An alternative pipeline using sequence data from a non-traditional model species, Macquaria ambigua." PLOS ONE 14, no. 12 (December 12, 2019): e0226365. http://dx.doi.org/10.1371/journal.pone.0226365.
Повний текст джерелаVu, Nguyen Thanh, Tran Thi Thuy Ha, Vo Thi Bich Thuy, Vu Thi Trang, and Nguyen Hong Nguyen. "Population Genomic Analyses of Wild and Farmed Striped Catfish Pangasianodon Hypophthalmus in the Lower Mekong River." Journal of Marine Science and Engineering 8, no. 6 (June 25, 2020): 471. http://dx.doi.org/10.3390/jmse8060471.
Повний текст джерелаДисертації з теми "DArT-seq"
Curtolo, Maiara. "Mapeamento de QTL para qualidade de frutos de citros utilizando marcadores DArT-seq." Universidade de São Paulo, 2016. http://www.teses.usp.br/teses/disponiveis/64/64133/tde-13092016-151835/.
Повний текст джерелаThe incorporation of new biotechnological tools to citrus breeding programs provides many new possibilities. The DArT markers (Diversity Arrays Technology), combined with Next-Generation Sequencing presents good applicability in the construction of high resolution genetic maps and QTL mapping. This study aimed to construct an integrated genetic map of \'Murcott\' tangor and \'Pera\' sweet orange using the DArTseqTM molecular markers, and localize QTL for twelve fruit quality traits. A controlled cross between \'Murcott\' tangor and \'Pera\' sweet orange was conducted at the Citrus Germplasm Bank at the \"Sylvio Moreira\" Citrus Centre of Agronomic Institute, located in Cordeirópolis-SP in 1997.A family with 350 hybrid individuals was obtained, from which 278 were selected for evaluation of fruit traits in 2012. In this study, the 278 F1 individuals were genotyped using the DArTseqTM markers. To build the integrated map, we used the OneMap program and considered all DArT loci that showed no segregation deviation. The likelihood ratio was used for formation of linkage groups, besides the genomic information obtained from the available Citrus sinensis genome sequence (http://citrus.hzau.edu.cn/orange/index.php). The partially integrated map contained 661 markers linked in 13 linkage groups, with genomic coverage of 2,774 cM, the map is saturated and represent the species haploid chromosome number. According to the analyses using \"Composite Interval Mapping\" (CIM) and the results of the permutation test, a total of 19 QTL were identified for the 12 fruits characteristics analyzed: diameter (cm), height (cm), ratio of H/D, weight (g), rind thickness (cm), segments per fruit, total soluble solids ((°Brix), Acidity (%), Juice content (%), number of seeds, ratio of total soluble solids /acidity and number of fruits per box. The genome sequence (pseudochromosomes) of Citrus sinensis L. Osbeck was compared to the genetic map, and sinteny was clearly identified. Further analysis of the map regions with the highest LOD score enabled the identification of the presence of genes that could be associated with the characteristics. The genome sequences allowed identification of genes that may respond for phenotypic traits in Citrus
Rizzi, Vanessa. "Diversidade, estruturação genética e mapeamento associativo em germoplasma japonês de arroz utilizando marcadores DArT-seq." Universidade de São Paulo, 2017. http://www.teses.usp.br/teses/disponiveis/11/11137/tde-20032018-111547/.
Повний текст джерелаThe knowledge of the genetic diversity and population structure of varieties maintained in germplasm banks is crucial for their effective use in breeding programs. Association mapping, also known as linkage disequilibrium mapping, is one of the main methods for relating genes and alleles to the characteristics of interest, through the co-segregation of polymorphic genetic markers with the genes involved in the variation of the characteristics under study. The Rice Germplasm Bank of the Department of Genetics of ESALQ contains 192 Japanese accessions that were studied with the purpose of understanding its diversity, genetic structuring and determining the genomic association of agronomic traits related to grain production. The molecular characterization was conducted by DArTseq technology, which generated data of SNPs (single-nucleotide polymorphism) markers and silico DArTs. Then, after filtering, 5,578 high-quality SNPs were used to calculate the diversity estimates in hierfstat package and the accession panel structure through discriminant analysis of principal components (DAPC), which consists of determining the cluster existence in a group of genotypes where there is no a priori information about the existence of groups. The genetic diversity in the accessions was evidenced by the expected heterozygosity value (HS) (0.0279) and the population structure was evidenced by the formation of three clusters. The association mapping was performed using the GAPIT package, considering six characters: number of days for flowering (NDF), plant height (EP), panicle length (CP), plot weight (PP), mass of thousand grains (MMG) and CYCLE, as well as 24.266 silico DArTs markers and 1.965 SNPs markers. We detected a total of 113 significant associations genotype-phenotype (P <0.001) when used silico DArTs markers in all six analyzed characteristics and a total of 21 significant associations genotype-phenotype (P<0.001) when used SNPs markers for only four of the six analyzed characteristics: EP, CYCLE, MMG and PP. Considering the 113 silico DArTs significantly associated in the analysis, 90 were located in intergenic regions and 23 were localized within genes. While of the 21 significant SNPs, 11 were located in intergenic regions and 10 were located within genes. The information generated in this study was useful for testing associations throughout the rice genome. The mixed linear model (MLM) used in association mapping is believed to have been able to efficiently control false positives in the mapping using the SNPs markers. The information generated in this study serves as a basis for further evaluation using the set of significant markers as a starting point for determining the most important genes for rice yield.
Lima, Rômulo Pedro Macêdo. "Mapeamento de QTLs e eQTLs relacionados à resistência à Phytophthora parasitica (agente causador da gomose dos citros) em citrandarins." Botucatu, 2016. http://hdl.handle.net/11449/144697.
Повний текст джерелаResumo: Phytophthora nicotianae Breda de Haan (Phytophthora parasitica Dastur) e Phytophthora citrophthora (Smith & Smith), agentes causadores da gomose e podridão radicular, têm trazido graves danos em viveiros e pomares de citros no mundo inteiro. O Centro de Citricultura Sylvio Moreira/IAC vem realizando um amplo programa de melhoramento genético de citros via cruzamentos dirigidos com relação ao patossistema Phytophthora-citros, em que já foram verificadas diferenças no nível de resistência na progênie do cruzamento entre tangerina Sunki (Citrus sunki) e trifoliata Rubidoux (Poncirus trifoliata), a partir da detecção de genes diferencialmente expressos utilizando microarranjos, identificando transcritos envolvidos na resistência à Phytophthora, e do mapeamento genético. Este trabalho teve como objetivo principal mapear nos grupos de ligação dos mapas de P. trifoliata e C. sunki as regiões genômicas associadas à resistência à Phytophthora parasitica por meio de análise fenotípica (QTLs) e de expressão (eQTLs). Uma população de 110 híbridos, seus genitores e dois porta-enxertos de referência para a citricultura (limão Cravo e citrumelo Swingle), foi enxertada em limão Cravo e estabelecida em casa de vegetação. Cada híbrido foi conduzido com uma única haste e a inoculação foi realizada pelo método do disco a partir do meio de cultura contendo o micélio de P. parasitica, a 10 cm e 15 cm acima da região da enxertia, totalizando duas inoculações por genótipo. As plantas foram mantidas ... (Resumo completo, clicar acesso eletrônico abaixo)
Mestre
Stenhouse, Gulperi. "Malleefowl and anthropogenic change: an integrated analysis of population trends, landscape genetics and movement ecology." Thesis, 2022. https://hdl.handle.net/2440/135973.
Повний текст джерелаThesis (Ph.D.) -- University of Adelaide, School of Biological Sciences, 2022
Частини книг з теми "DArT-seq"
Tegowski, Matthew, Huanyu Zhu, and Kate D. Meyer. "Detecting m6A with In Vitro DART-Seq." In Methods in Molecular Biology, 363–74. New York, NY: Springer US, 2021. http://dx.doi.org/10.1007/978-1-0716-1851-6_20.
Повний текст джерела