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Добірка наукової літератури з теми "Criblage de chimiothèques"
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Статті в журналах з теми "Criblage de chimiothèques"
Rognan, Didier, and Pascal Bonnet. "Les chimiothèques et le criblage virtuel." médecine/sciences 30, no. 12 (December 2014): 1152–60. http://dx.doi.org/10.1051/medsci/20143012019.
Повний текст джерелаROGNAN, Didier. "Méthodes de criblage in silico de chimiothèques." Médicaments et produits pharmaceutiques, March 2014. http://dx.doi.org/10.51257/a-v1-pha1020.
Повний текст джерелаДисертації з теми "Criblage de chimiothèques"
Vézina-Dawod, Simon. "Design, synthèse et criblage de chimiothèques peptidomimétiques pour la découverte d'agents antinéoplasiques." Doctoral thesis, Université Laval, 2018. http://hdl.handle.net/20.500.11794/28267.
Повний текст джерелаTargeting protein-protein interactions represents an innovative and under-exploited therapeutic approach by the pharmaceutical industry and biomedical research. Because of their physicochemical nature, protein-protein interactions represent a major challenge for conventional screening methods with small molecule libraries. Indeed, the chemical space covered by the molecular structures found in the available libraries is poorly adapted to the reality of protein-protein interactions. In order to develop privileged and better adapted structures, the medicinal chemist must understand the nature of these interactions and move away from the traditional dogma of the so-called drug-like molecules. Peptides are excellent candidates for studying these interactions, nevertheless their pharmacological properties are generally disappointing in vivo. Peptidomimetism is then a more than relevant concept to combine the selectivity and efficiency of interaction against proteins with the concepts of bioavailability and metabolic stability. Many peptidomimetic platforms are available or emerging, and several major challenges are on the horizon. Indeed, the incorporation of a large molecular diversity and the adaptation of these platforms with the high throughput biological screening methods are only a few examples of the challenges that chemists and biochemists will have to meet. This work deals with the development and exploitation of different peptidomimetic molecular diversities, either macrocyclic or heterocyclic, but which serve the same purpose: to exploit privileged structures to discover new modulators of protein-protein interactions or simply innovative bioactive agents with advantageous pharmacological properties.
Monge, Aurélien. "Création et utilisation de chimiothèques optimisées pour la recherche in silico de nouveaux composés bioactifs." Phd thesis, Université d'Orléans, 2006. http://tel.archives-ouvertes.fr/tel-00122995.
Повний текст джерелаIdéalement la préparation des composés destinés au criblage devrait se faire grâce à un logiciel dédié à cette problématique. Il n'existe cependant aucun logiciel qui soit complètement adapté. Nous avons donc entrepris le développement d'un logiciel de ce type : ScreeningAssistant.
Ce logiciel s'appuie sur un système de gestion de bases de données et permet de créer et de maintenir à jour des chimiothèques de plusieurs millions de molécules uniques provenant de fournisseurs différents. Il permet également de filtrer les structures, en éliminant les molécules potentiellement problématiques ou avec des probabilités d'activités faibles, et de sélectionner un ensemble de composés divers.
Ce logiciel a été utilisé pour l'analyse d'une base de 5 millions de références provenant de 38 fournisseurs de produits chimiques. La proportion de composés uniques, originaux, « drug-like », « lead-like », et divers ont été comparés. La diversité a été étudiée en utilisant des notions différentes, et un score de diversité globale, prenant en compte la diversité suivant les différents critères, a été proposé.
Différentes applications de sélection de composés pour le criblage sont présentées. Ces applications utilisent le programme ScreeningAssistant et d'autres algorithmes développés pour résoudre certains problèmes particuliers.
Perrier, Julie. "Criblage virtuel et expérimental de chimiothèques pour le développement d’inhibiteurs des cytokines TNF-alpha et IL-6." Thesis, Paris, CNAM, 2014. http://www.theses.fr/2015CNAM0978.
Повний текст джерелаAnti-cytokine biologics (monoclonal antibodies, soluble receptors) targeting TNF-alpha and IL-6in chronic inflammatory diseases have been a major success for pharmaceutical industry.However, they exhibit several drawbacks : resistance, difficult administration, high costs.Our team works on the discovery of small molecule inhibitors of cytokines suck as TNF-alphaand IL-6, in order to widen the range of therapeutic drugs. Orally active drugs would represent ahighly beneficial alternative for patients.During my PhD, I have performed an experimental screening (using cellular and biochemicalbinding testings) of the best compounds identified through virtual screening of a large chemicallibrary, and on pyridazine compounds of a medicinal chemical library. I have been able toidentify several small molecules inhibiting the interaction of TNF-! and IL-6 with their receptor.Moreover, my work will have an impact on the laboratory screening strategies.Overall, this work opens new avenues for anti-cytokine drug discovery
Baurin, Nicolas. "Etude et développement de techniques QSAR pour la recherche de molécules d'intérêt thérapeutique : criblage virtuel et analyse de chimiothèques." Orléans, 2002. http://www.theses.fr/2002ORLE2043.
Повний текст джерелаRobert, Florian. "Vers une thérapie pour deux maladies vasculaires rares : criblage de chimiothèques de médicaments pour les maladies Rendu-Osler et Hypertension Artérielle Pulmonaire." Thesis, Université Grenoble Alpes (ComUE), 2019. http://www.theses.fr/2019GREAV039.
Повний текст джерелаBMP9 is a ligand of the TGF-β family and is considered as a vascular quiescence factor. Different actors within BMP9 signaling pathway such as receptors ALK1 and BMPR2 are found to be mutated in two rare vascular diseases, Rendu-Osler disease also called Hereditary Hemorrhagic Telangiectasia and Pulmonary Arterial Hypertension, which are due to endothelial dysfunction. Current treatments aim to improve symptoms in patients, whitout providing a real cure. Thus, it is essential today to find new etiological treatments restoring this signaling pathway. To do this, I used high-throughput screening to reposition potential drug candidates from the Prestwick and TargetMol libraries, a total of 2133 molecules approved by FDA and EMA. These screens were realized on endothelial cells models reporting the BMP9 pathway using a BMP sensitive promoter (BRE, BMP Response Element). I developed and miniaturized a first endothelial model HMEC-1 secreting a BRE-controlled Metridia Luciferase, then a second one using double transfection of Firefly luciferase under BRE control and Renilla Luciferase as a transfection control. The first model revealed only false positives hits. However, the second one allowed us to identify several molecules activating the cAMP pathway but which action hasn’t been confirmed at molecular levels. A last screen was performed on non-endothelial cells (Myoblasts C2C12BRA), allowing us to identify two other molecules which are currently undergoing characterisations
L'hôte, Valentin. "Senolytic drug discovery and mechanisms of action in BRAF-V600E oncogene-induced senescence." Thesis, université Paris-Saclay, 2022. http://www.theses.fr/2022UPASL042.
Повний текст джерелаIn response to oncogene expression (such as BRAF-V600E), genotoxic insults, or other stresses, eukaryotic cells can suppress apoptosis and enter senescence. Senescence is a cell fate characterized by a quasi-irreversible proliferative arrest and deep transcriptional reprogramming, notably leading to an important secretion of inflammatory factors collectively termed the senescence-associated secretory phenotype (SASP). Due to increased secretory demands and chronic stress, proteostasis may be challenged in senescence. As it limits the proliferation of cells possibly bearing pre-neoplastic potential, senescence is an essential tumor suppressing process; however, the accumulation of senescent cells during aging, in pathological contexts, or following chemotherapy or radiotherapy, is detrimental and leads to tissue dysfunction. Senolytics are drugs that selectively induce apoptosis in senescent cells while sparing normal cells, and their therapeutical application has proved a valuable pharmacological strategy in pathological contexts in which senescence plays a driving role. The aim of this project was to identify novel senolytic compounds, notably in BRAF-V600E-induced senescence, and to characterize their mechanisms of action, thereby adding to the understanding of cell survival pathways regulation in senescence. Cardioglycosides constitute a class of drugs that were identified as potent senolytics in the screen of a repurposing library. We showed that BRAF-V600E senescent cells were remarkably sensitive to senolysis induced by cardioglycosides. We demonstrated that BRAF-V600E senescent cells have a heightened autophagy flux that is essential to their survival, and that cardioglycosides acted as senolytics by inhibiting autophagy through Na,K-ATPase signal transduction. Accordingly, blocking autophagy through other routes such as with chloroquine was also senolytic. To gain insight into the regulation of autophagy and proteostasis in senescence and identify new senolytic targets, we then assessed endoplasmic reticulum stress and the unfolded protein response (UPR) in different senescence models. In parallel, we screened various chemical libraries, in which we identified potential senolytics targeting different facets of proteostasis. Interestingly, we found that UPR sensor Ire1 was upregulated in oncogene-induced senescence. Ire1 regulates cell fate through several pathways, and many small compounds that differentially modulate its activity are available. We thus employed a panel of Ire1 modulators to begin characterizing its role in senescence, and establish novel senolytic strategies. Collectively, our results highlight the senolytic potential of targeting autophagy and proteostasis in oncogene-induced senescence, and the importance of deciphering the mechanisms of action of senolytics to identify new targets and regulatory pathways
Lin, Arkadii. "Cartographie topographique générative : un outil puissant pour la visualisation, l'analyse et la modélisation de données chimiques volumineuses." Thesis, Strasbourg, 2019. http://www.theses.fr/2019STRAF017.
Повний текст джерелаThis thesis concerns the application of the Generative Topographic Mapping (GTM) approach to the analysis, visualization, and modeling of Big Data in chemistry. The main topics covered in this work are multi-target virtual screening in drug design and large chemical libraries visualization, analysis, and comparison. Several methodological developments were suggested: (i) an automatized hierarchical GTM zooming algorithm helping to resolve the map resolution problem; (ii) an automatized Maximum Common Substructure (MCS) extraction protocol improving efficiency of data analysis; (iii) constrained GTM-based screening allowing to detect molecules with a desired pharmacological profile, and (iv) a parallel GTM technique, which significantly increases the speed of GTM training. Developed methodologies were implemented in a software package used in both academic (University of Strasbourg, France) and industrial (Boehringer Ingelheim Pharma company, Germany) projects
Önen, Filiz Esra. "Conception, synthèse et évaluation de nouvelles familles de composés anticancéreux et antibactériens." Paris 6, 2007. http://www.theses.fr/2007PA066046.
Повний текст джерелаGiganti, David. "Etudes structurales et criblages in silico de chimiothèques sur des cibles thérapeutiques de plasmodium falciparum et mycobacterium tuberculosis." Paris 7, 2008. http://www.theses.fr/2008PA077243.
Повний текст джерелаNowadays, the identification of leads from a therapeutic target becomes a classic pipeline for drug discovery. In silico virtual screening approaches, based on this target structure allow the enrichment of a large compounds databank in a significantly reduced subset. This selection involves a docking procedure, for each compound, which predicts their binding mode to the target and their affinity, in order to classify them. Finally, the experimental validation of these relevant compounds is a performing substitute to a costly High-Throughput Screening. On two collaborative projects at Institut Pasteur, we apply a structure-based screening to help antimalarial and antituberculous leads finding. The therapeutic target SUB2 is an essential protease in the erythrocyte invasion. We successfully manage to identify compounds able to inhibit its activity, in vitro. Since no experimental structure of SUB2 is available, the screening required a prior comparative modeling of the P. Falciparum on homologous bacterial proteins. The second project concerna PimA, a fundamental glycosyltransférase for the construction of the mycobacteria cell wall. In contract to SUB2, the virtual screening process take advantage of the recent structure frorn PimA crystal and lead the determination of promising inhibitors. For both projects, we also initiate a optimization campaign based on the understanding of the inhibitory mecanism of the leads in the aim to design their chemical structure. Improvement of their efficiency is indeed necessary at this point of the preclinical step. We also study the non specific and superficial association of these enzymes to the plasmatic membrane
Castan, Agnès. "Inhibition de l'angiogenèse tumorale : criblage d'une chimiothèque et caractérisation d'un nouveau composé agissant sur la voie de signalisation Ras-ERK." Thesis, Grenoble, 2014. http://www.theses.fr/2014GRENV017/document.
Повний текст джерелаSeveral anti-tumoral therapies targeting angiogenesis have been developed over the recent years and have demonstrated benefits for several metastatic cancers. However, in many cases, resistances to these treatments appear over time, allowing tumor escape. The development of new anti-angiogenic compounds is thus dramatically urged in order to propose second-line anti-angiogenic treatments. In this work, our aim was to identify new anti-angiogenic compounds through high throughput screening of the academic library from the University of Grenoble. We adapted the endothelial cell scratch assay to 96-well plates. We identified a family of molecules that specifically inhibited endothelial cell migration. The anti-angiogenic activity of the leader molecule (COB223) was confirmed in vitro in 3D cellular models of angiogenesis and in vivo using a mouse model of subcutaneous sponge implantation. We tested the anti-tumoral activity of COB223 on a mouse xenograft model. We observed that tumor growth was significantly reduced in treated mice correlated with decreased microvessel density. In search for its mechanism of action, we observed that COB223 inhibits cell proliferation and reduces VEGF-A-induced phosphorylation of MEK and ERK1/2 in endothelial cells. We also showed that COB223 did not affect VEGFR2 and PLC phosphorylation but reduces Raf phosphorylation responsible for its activity. These results allow us to propose that the molecular site of action of COB223 is located in the VEGF/ PLC /PKC/ERK pathway, between PKC and MEK