Articoli di riviste sul tema "Transcriptomic data management"
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Ortiz, Randy, Priyanka Gera, Christopher Rivera e Juan C. Santos. "Pincho: A Modular Approach to High Quality De Novo Transcriptomics". Genes 12, n. 7 (22 giugno 2021): 953. http://dx.doi.org/10.3390/genes12070953.
Testo completoHynst, Jakub, Karla Plevova, Lenka Radova, Vojtech Bystry, Karol Pal e Sarka Pospisilova. "Bioinformatic pipelines for whole transcriptome sequencing data exploitation in leukemia patients with complex structural variants". PeerJ 7 (12 giugno 2019): e7071. http://dx.doi.org/10.7717/peerj.7071.
Testo completoKrishnan, Vidya S., e Sulev Kõks. "Transcriptional Basis of Psoriasis from Large Scale Gene Expression Studies: The Importance of Moving towards a Precision Medicine Approach". International Journal of Molecular Sciences 23, n. 11 (30 maggio 2022): 6130. http://dx.doi.org/10.3390/ijms23116130.
Testo completoSauta, Elisabetta, Matteo Zampini, Daniele Dall'Olio, Claudia Sala, Gabriele Todisco, Erica Travaglino, Luca Lanino et al. "Combining Gene Mutation with Transcriptomic Data Improves Outcome Prediction in Myelodysplastic Syndromes". Blood 142, Supplement 1 (28 novembre 2023): 1863. http://dx.doi.org/10.1182/blood-2023-186222.
Testo completoDunn, Jemma, Vasileios P. Lenis, David A. Hilton, Rolf Warta, Christel Herold-Mende, C. Oliver Hanemann e Matthias E. Futschik. "Integration and Comparison of Transcriptomic and Proteomic Data for Meningioma". Cancers 12, n. 11 (5 novembre 2020): 3270. http://dx.doi.org/10.3390/cancers12113270.
Testo completoHuang, Kexin, Yun Zhang, Haoran Gong, Zhengzheng Qiao, Tiangang Wang, Weiling Zhao, Liyu Huang e Xiaobo Zhou. "Inferring evolutionary trajectories from cross-sectional transcriptomic data to mirror lung adenocarcinoma progression". PLOS Computational Biology 19, n. 5 (25 maggio 2023): e1011122. http://dx.doi.org/10.1371/journal.pcbi.1011122.
Testo completoChen, Huapu, Zhiyuan Li, Yaorong Wang, Hai Huang, Xuewei Yang, Shuangfei Li, Wei Yang e Guangli Li. "Comparison of Gonadal Transcriptomes Uncovers Reproduction-Related Genes with Sexually Dimorphic Expression Patterns in Diodon hystrix". Animals 11, n. 4 (7 aprile 2021): 1042. http://dx.doi.org/10.3390/ani11041042.
Testo completoLindholm-Perry, Amanda. "90 Leveraging the Potential of Molecular and Genetic Markers to Improve Feed Efficiency in Beef Cattle". Journal of Animal Science 101, Supplement_3 (6 novembre 2023): 94–95. http://dx.doi.org/10.1093/jas/skad281.115.
Testo completoBao, Riyue, Lei Huang, Jorge Andrade, Wei Tan, Warren A. Kibbe, Hongmei Jiang e Gang Feng. "Review of Current Methods, Applications, and Data Management for the Bioinformatics Analysis of Whole Exome Sequencing". Cancer Informatics 13s2 (gennaio 2014): CIN.S13779. http://dx.doi.org/10.4137/cin.s13779.
Testo completoFranses, Joseph W., Michael J. Raabe, Amaya Pankaj, Bidish Patel, Avril Coley, Irun Bhan, Martin Aryee e David T. Ting. "Abstract PO016: Spatial transcriptomic profiling to characterize the tumor-vascular interactome of hepatocellular carcinoma". Clinical Cancer Research 28, n. 17_Supplement (1 settembre 2022): PO016. http://dx.doi.org/10.1158/1557-3265.liverca22-po016.
Testo completoRoumani, Marwa, Jacques Le Bot, Michel Boisbrun, Florent Magot, Arthur Péré, Christophe Robin, Frédérique Hilliou e Romain Larbat. "Transcriptomics and Metabolomics Analyses Reveal High Induction of the Phenolamide Pathway in Tomato Plants Attacked by the Leafminer Tuta absoluta". Metabolites 12, n. 6 (26 maggio 2022): 484. http://dx.doi.org/10.3390/metabo12060484.
Testo completoManem, Venkata S. K., Olga Sazonova, Andréanne Gagné, Michèle Orain, Babak Khoshkrood-Mansoori, Nathalie Gaudreault, Yohan Bossé e Philippe Joubert. "Unravelling actionable biology using transcriptomic data to integrate mitotic index and Ki-67 in the management of lung neuroendocrine tumors". Oncotarget 12, n. 3 (2 febbraio 2021): 209–20. http://dx.doi.org/10.18632/oncotarget.27874.
Testo completoGuo, Eddie, Pouria Torabi, Daiva E. Nielsen e Matthew Pietrosanu. "Deep learning transcriptomic model for prediction of pan-drug chemotherapeutic sensitivity". STEM Fellowship Journal 7, n. 1 (1 dicembre 2021): 40–53. http://dx.doi.org/10.17975/sfj-2021-013.
Testo completoCarreras, Joaquim. "Artificial Intelligence Analysis of Ulcerative Colitis Using an Autoimmune Discovery Transcriptomic Panel". Healthcare 10, n. 8 (5 agosto 2022): 1476. http://dx.doi.org/10.3390/healthcare10081476.
Testo completoTana, Michele May-Sien, Arielle Klepper, Amy Lyden, Angela Oliveira Pisco, Maira Phelps, Breann McGee, Kelsey Green et al. "Transcriptomic profiling of blood from autoimmune hepatitis patients reveals potential mechanisms with implications for management". PLOS ONE 17, n. 3 (21 marzo 2022): e0264307. http://dx.doi.org/10.1371/journal.pone.0264307.
Testo completoGuo, Qi. "#277 : Transcriptome Analysis Revealed a Delayed and Attenuated Estrogen Response in IUA Patients". Fertility & Reproduction 05, n. 04 (dicembre 2023): 724. http://dx.doi.org/10.1142/s2661318223744302.
Testo completoOrtigosa, Francisco, Concepción Ávila, Lourdes Rubio, Lucía Álvarez-Garrido, José A. Carreira, Rafael A. Cañas e Francisco M. Cánovas. "Transcriptome Analysis and Intraspecific Variation in Spanish Fir (Abies pinsapo Boiss.)". International Journal of Molecular Sciences 23, n. 16 (19 agosto 2022): 9351. http://dx.doi.org/10.3390/ijms23169351.
Testo completoRahmat, Nur Lina, Anis Nadyra Zifruddin, Cik Mohd Rizuan Zainal Abidin, Nor-Azlan Nor Muhammad e Maizom Hassan. "The Developmental Transcriptome of Bagworm, Metisa plana (Lepidoptera: Psychidae) and Insights into Chitin Biosynthesis Genes". Genes 12, n. 1 (23 dicembre 2020): 7. http://dx.doi.org/10.3390/genes12010007.
Testo completoManem, Venkata S. K., Olga Sazonova, Andréanne Gagné, Michèle Orain, Babak Khoshkrood-Mansoori, Nathalie Gaudreault, Yohan Bossé e Philippe Joubert. "Addendum: Unravelling actionable biology using transcriptomic data to integrate mitotic index and Ki-67 in the management of lung neuroendocrine tumors". Oncotarget 13, n. 1 (1 gennaio 2022): 1302. http://dx.doi.org/10.18632/oncotarget.28321.
Testo completoNguyen, HD, A. Allaire, P. Diamandis, M. Bisaillon, MS Scott e M. Richer. "A Machine Learning Analysis of TCGA Expression Data to Finding Signatures for “Normal-Like” IDH-WT Diffuse Gliomas with a Longer Survival". Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques 48, s1 (maggio 2021): S2. http://dx.doi.org/10.1017/cjn.2021.88.
Testo completoBerrios, Daniel C., Jonathan Galazka, Kirill Grigorev, Samrawit Gebre e Sylvain V. Costes. "NASA GeneLab: interfaces for the exploration of space omics data". Nucleic Acids Research 49, n. D1 (20 ottobre 2020): D1515—D1522. http://dx.doi.org/10.1093/nar/gkaa887.
Testo completoLi, Shuxin, Jiarui Wang, Jiale Li, Meihong Yue, Chuncheng Liu, Libing Ma e Ying Liu. "Integrative analysis of transcriptome complexity in pig granulosa cells by long-read isoform sequencing". PeerJ 10 (25 maggio 2022): e13446. http://dx.doi.org/10.7717/peerj.13446.
Testo completoPark, Jihye, Kyuho Kang, Yeonghoon Son, Kwang Seok Kim, Keunsoo Kang e Hae-June Lee. "Low-Dose Radiation-Induced Transcriptomic Changes in Diabetic Aortic Endothelial Cells". Data 8, n. 5 (18 maggio 2023): 92. http://dx.doi.org/10.3390/data8050092.
Testo completoGyorffy, Balazs, e Libero Santarpia. "Abstract PO2-03-08: Uncovering Novel Potential Prognostic Biomarkers in Basal-Like Breast Cancer using Transcriptomic Data of 1,899 Patients". Cancer Research 84, n. 9_Supplement (2 maggio 2024): PO2–03–08—PO2–03–08. http://dx.doi.org/10.1158/1538-7445.sabcs23-po2-03-08.
Testo completoLindskrog, Sia V., Sofie S. Schmøkel, Iver Nordentoft, Philippe Lamy, Michael Knudsen, Jørgen B. Jensen e Lars Dyrskjøt. "Abstract 3483: Single-nucleus RNA-sequencing of human bladder tumors delineates intra-tumor cellular and subtype heterogeneity". Cancer Research 82, n. 12_Supplement (15 giugno 2022): 3483. http://dx.doi.org/10.1158/1538-7445.am2022-3483.
Testo completoArce-Leal, Ángela Paulina, Rocío Bautista, Edgar Antonio Rodríguez-Negrete, Miguel Ángel Manzanilla-Ramírez, José Joaquín Velázquez-Monreal, María Elena Santos-Cervantes, Jesús Méndez-Lozano et al. "Gene Expression Profile of Mexican Lime (Citrus aurantifolia) Trees in Response to Huanglongbing Disease caused by Candidatus Liberibacter asiaticus". Microorganisms 8, n. 4 (7 aprile 2020): 528. http://dx.doi.org/10.3390/microorganisms8040528.
Testo completoDuan, Xin-le, Bi-an Zhao, Ying Liu, Man-qiong Xiong, Nan He, Shao-kang Huang, Wei-fone Huang e Jiang-hong Li. "Development and characterization of six novel microsatellite markers for honey bee parasitic mite Varroa destructor (Mesostigmata: Varroidae) ". Systematic and Applied Acarology 25, n. 10 (2 ottobre 2020): 1733–44. http://dx.doi.org/10.11158/saa.25.10.2.
Testo completoChen, Han, Honghua Su, Shuai Zhang, Tianxing Jing, Zhe Liu e Yizhong Yang. "Transcriptomic and Metabolomic Responses in Cotton Plant to Apolygus lucorum Infestation". Insects 13, n. 4 (15 aprile 2022): 391. http://dx.doi.org/10.3390/insects13040391.
Testo completoGuo, Yaning, Siyu Zhang, Jing Ai, Panpan Zhang, Han Yao, Yunfei Liu e Xiong Zhang. "Transcriptomic and biochemical analyses of drought response mechanism in mung bean (Vignaradiata (L.) Wilczek) leaves". PLOS ONE 18, n. 5 (10 maggio 2023): e0285400. http://dx.doi.org/10.1371/journal.pone.0285400.
Testo completoXiang, Xiao, Stéphanie Langlois, Marie-Eve St-Pierre, Anna Blinder, Philippe Charron, Tyson E. Graber, Stephanie L. Fowler et al. "Identification of pannexin 1-regulated genes, interactome, and pathways in rhabdomyosarcoma and its tumor inhibitory interaction with AHNAK". Oncogene 40, n. 10 (9 febbraio 2021): 1868–83. http://dx.doi.org/10.1038/s41388-020-01623-2.
Testo completoShang, Yi, Yanbo Wang, Jianyu Deng, Xunyue Liu, Yihao Fang, Qiong Rao e Huiming Wu. "Comparative Transcriptome Analysis Reveals the Mechanism Related to Fluazinam Stress of Panonychus citri (Acarina: Tetranychidae)". Insects 11, n. 11 (26 ottobre 2020): 730. http://dx.doi.org/10.3390/insects11110730.
Testo completoHeyckendorf, Jan, Sebastian Marwitz, Maja Reimann, Korkut Avsar, Andrew R. DiNardo, Gunar Günther, Michael Hoelscher et al. "Prediction of anti-tuberculosis treatment duration based on a 22-gene transcriptomic model". European Respiratory Journal 58, n. 3 (11 febbraio 2021): 2003492. http://dx.doi.org/10.1183/13993003.03492-2020.
Testo completoMcGrew, Brooklyn, Aman Shrivastava, Philip Fernandes, Lubaina Ehsan, Yash Sharma, Dawson Payne, Lillian Dillard et al. "IDENTIFYING RELEVANT PATHWAYS AND BIOMARKERS IN CROHN’S DISEASE USING CONTEXTUALIZED METABOLIC NETWORK MODEL". Inflammatory Bowel Diseases 27, Supplement_1 (1 gennaio 2021): S9—S10. http://dx.doi.org/10.1093/ibd/izaa347.022.
Testo completoRobinson, Leslie C., Sandro Santagata e Todd C. Hankinson. "Potential evolution of neurosurgical treatment paradigms for craniopharyngioma based on genomic and transcriptomic characteristics". Neurosurgical Focus 41, n. 6 (dicembre 2016): E3. http://dx.doi.org/10.3171/2016.9.focus16308.
Testo completoPapadopoulou, Gethsimani, Eleni Manoloudi, Nikolena Repousi, Lemonia Skoura, Tara Hurst e Timokratis Karamitros. "Molecular and Clinical Prognostic Biomarkers of COVID-19 Severity and Persistence". Pathogens 11, n. 3 (2 marzo 2022): 311. http://dx.doi.org/10.3390/pathogens11030311.
Testo completoYang, Hongyan, Jingyi Lu, Kui Wang, Chaoyan Wu, Bin Yang e Jiaying Zhu. "Transcriptome Analysis Reveals the Venom Genes of the Ectoparasitoid Habrobracon hebetor (Hymenoptera: Braconidae)". Insects 15, n. 6 (5 giugno 2024): 426. http://dx.doi.org/10.3390/insects15060426.
Testo completoSegaert, Pieter, Marta B. Lopes, Sandra Casimiro, Susana Vinga e Peter J. Rousseeuw. "Robust identification of target genes and outliers in triple-negative breast cancer data". Statistical Methods in Medical Research 28, n. 10-11 (27 agosto 2018): 3042–56. http://dx.doi.org/10.1177/0962280218794722.
Testo completoNadorp, Bettina, Audrey Lasry, Sanam Loghavi, Ravi Patel, Ben Kelly, Christopher J. Walker, Stephanie LaHaye et al. "The Genomic and Transcriptomic Landscape of Myeloid Sarcoma and Associated Acute Myeloid Leukemia". Blood 142, Supplement 1 (28 novembre 2023): 292. http://dx.doi.org/10.1182/blood-2023-182967.
Testo completoAlonso Paz, Sandra, Ignacio Duran, Enrique Grande e Alvaro Pinto. "Evaluation of deep learning techniques (DL) in RNA sequencing data for the prediction of response to immune checkpoint inhibitors in patients with metastatic renal cell cancer m(RCC)." Journal of Clinical Oncology 41, n. 6_suppl (20 febbraio 2023): 641. http://dx.doi.org/10.1200/jco.2023.41.6_suppl.641.
Testo completoSubramani, Jothimani, G. Sathish Kumar e Thippa Reddy Gadekallu. "Gene-Based Predictive Modelling for Enhanced Detection of Systemic Lupus Erythematosus Using CNN-Based DL Algorithm". Diagnostics 14, n. 13 (24 giugno 2024): 1339. http://dx.doi.org/10.3390/diagnostics14131339.
Testo completoZaccagnini, Germana, Biagina Maimone, Paola Fuschi, Marialucia Longo, Daniel Da Silva, Matteo Carrara, Christine Voellenkle et al. "Hypoxia-Induced miR-210 Is Necessary for Vascular Regeneration upon Acute Limb Ischemia". International Journal of Molecular Sciences 21, n. 1 (24 dicembre 2019): 129. http://dx.doi.org/10.3390/ijms21010129.
Testo completoKim, Hyung-Yong, Hee-Joo Choi, Jeong-Yeon Lee e Gu Kong. "Cancer Target Gene Screening: a web application for breast cancer target gene screening using multi-omics data analysis". Briefings in Bioinformatics 21, n. 2 (29 gennaio 2019): 663–75. http://dx.doi.org/10.1093/bib/bbz003.
Testo completoTang, Howard H. F., Peter D. Sly, Patrick G. Holt, Kathryn E. Holt e Michael Inouye. "Systems biology and big data in asthma and allergy: recent discoveries and emerging challenges". European Respiratory Journal 55, n. 1 (16 ottobre 2019): 1900844. http://dx.doi.org/10.1183/13993003.00844-2019.
Testo completoMédigue, Claudine, Alexandra Calteau, Stéphane Cruveiller, Mathieu Gachet, Guillaume Gautreau, Adrien Josso, Aurélie Lajus et al. "MicroScope—an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data". Briefings in Bioinformatics 20, n. 4 (12 settembre 2017): 1071–84. http://dx.doi.org/10.1093/bib/bbx113.
Testo completoLuo, Jie, Marien Havé, Gilles Clément, Frédérique Tellier, Thierry Balliau, Alexandra Launay-Avon, Florence Guérard, Michel Zivy e Céline Masclaux-Daubresse. "Integrating multiple omics to identify common and specific molecular changes occurring in Arabidopsis under chronic nitrate and sulfate limitations". Journal of Experimental Botany 71, n. 20 (21 luglio 2020): 6471–90. http://dx.doi.org/10.1093/jxb/eraa337.
Testo completoLazar, Alexandra. "Recent Data about the Use of Corticosteroids in Sepsis—Review of Recent Literature". Biomedicines 12, n. 5 (30 aprile 2024): 984. http://dx.doi.org/10.3390/biomedicines12050984.
Testo completoSenevirathna, Jayan Duminda Mahesh, Ryo Yonezawa, Taiki Saka, Yoji Igarashi, Noriko Funasaka, Kazutoshi Yoshitake, Shigeharu Kinoshita e Shuichi Asakawa. "Transcriptomic Insight into the Melon Morphology of Toothed Whales for Aquatic Molecular Developments". Sustainability 13, n. 24 (18 dicembre 2021): 13997. http://dx.doi.org/10.3390/su132413997.
Testo completoYim, Jaewoo, Sung Won Cho, Beomhee Kim, Sungwoo Park, Yong Hee Han e Sang Woo Seo. "Transcriptional Profiling of the Probiotic Escherichia coli Nissle 1917 Strain under Simulated Microgravity". International Journal of Molecular Sciences 21, n. 8 (11 aprile 2020): 2666. http://dx.doi.org/10.3390/ijms21082666.
Testo completoSung, Kidon, Dan Li, Jungwhan Chon, Ohgew Kweon, Minjae Kim, Joshua Xu, Miseon Park e Saeed A. Khan. "Transcriptomic Response of Human Nosocomial Pathogen Pseudomonas aeruginosa Biofilms Following Continuous Exposure to Antibiotic-Impregnated Catheters". Data 7, n. 3 (17 marzo 2022): 35. http://dx.doi.org/10.3390/data7030035.
Testo completoFeinstein, Yael, Jennifer Claire Walker, Mark J. Peters, Simon Nadel, Nazima Pathan, Naomi Edmonds, Jethro Herberg et al. "Cohort profile of the Biomarkers of Acute Serious Illness in Children (BASIC) study: a prospective multicentre cohort study in critically ill children". BMJ Open 8, n. 11 (novembre 2018): e024729. http://dx.doi.org/10.1136/bmjopen-2018-024729.
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