Articoli di riviste sul tema "Immunopeptidomics"
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Ternette, Nicola, e Anthony W. Purcell. "Immunopeptidomics Special Issue". PROTEOMICS 18, n. 12 (giugno 2018): 1800145. http://dx.doi.org/10.1002/pmic.201800145.
Testo completoShapiro, Ilja E., Marco Tognetti, Tikira Temu, Oliver M. Bernhardt, Daniel Redfern, Yuehan Feng, Roland Bruderer e Lukas Reiter. "Abstract 5376: Quantitative profiling of HLA class I and class II antigens and neoantigens in tissue biopsy and PBMC samples using an optimized mass spectrometry-based workflow". Cancer Research 84, n. 6_Supplement (22 marzo 2024): 5376. http://dx.doi.org/10.1158/1538-7445.am2024-5376.
Testo completoMayer, Rupert L., e Karl Mechtler. "Immunopeptidomics in the Era of Single-Cell Proteomics". Biology 12, n. 12 (12 dicembre 2023): 1514. http://dx.doi.org/10.3390/biology12121514.
Testo completoConnelley, Timothy, Annalisa Nicastri, Tara Sheldrake, Christina Vrettou, Andressa Fisch, Birkir Reynisson, Soren Buus et al. "Immunopeptidomic Analysis of BoLA-I and BoLA-DR Presented Peptides from Theileria parva Infected Cells". Vaccines 10, n. 11 (11 novembre 2022): 1907. http://dx.doi.org/10.3390/vaccines10111907.
Testo completoChong, Chloe, George Coukos e Michal Bassani-Sternberg. "Identification of tumor antigens with immunopeptidomics". Nature Biotechnology 40, n. 2 (11 ottobre 2021): 175–88. http://dx.doi.org/10.1038/s41587-021-01038-8.
Testo completoMellacheruvu, Dattatreya, Rachel Pyke, Charles Abbott, Nick Phillips, Sejal Desai, Rena McClory, John West, Richard Chen e Sean Boyle. "57 Precision neoantigen discovery using novel algorithms and expanded HLA-ligandome datasets". Journal for ImmunoTherapy of Cancer 8, Suppl 3 (novembre 2020): A62. http://dx.doi.org/10.1136/jitc-2020-sitc2020.0057.
Testo completoFoster, Leonard, Queenie Chan, Charlie Kuan e Hong Bing Yu. "A framework for unbiased, robust and system-wide characterization of MHC-bound peptides and epitopes (APP5P.111)". Journal of Immunology 194, n. 1_Supplement (1 maggio 2015): 183.13. http://dx.doi.org/10.4049/jimmunol.194.supp.183.13.
Testo completoKochin, Vitaly, Takayuki Kanaseki, Sho Miyamoto, Daichi Morooka, Keigo Moniwa, Yutaro Ikeuchi, Akari Takaya, Yoshihiko Hirohashi, Toshihiko Torigoe e Noriyuki Sato. "Human cancer immunopeptidomics for efficient CTL immunotherapy". Annals of Oncology 26 (novembre 2015): vii30. http://dx.doi.org/10.1093/annonc/mdv424.02.
Testo completoIstrail, S., L. Florea, B. V. Halldorsson, O. Kohlbacher, R. S. Schwartz, V. B. Yap, J. W. Yewdell e S. L. Hoffman. "Comparative immunopeptidomics of humans and their pathogens". Proceedings of the National Academy of Sciences 101, n. 36 (23 agosto 2004): 13268–72. http://dx.doi.org/10.1073/pnas.0404740101.
Testo completoGarcia‐Moure, Marc, Andrew G. Gillard, Marta M. Alonso, Juan Fueyo e Candelaria Gomez‐Manzano. "Oncolytic adenoviruses and immunopeptidomics: a convenient marriage". Molecular Oncology 18, n. 4 (aprile 2024): 781–84. http://dx.doi.org/10.1002/1878-0261.13648.
Testo completoTegeler, Christian M., Jonas S. Heitmann, Helmut R. Salih, Juliane S. Walz e Annika Nelde. "Abstract 1972: Clinical implications of HLA expression and immunopeptidome-presented tumor antigens in ovarian carcinoma". Cancer Research 82, n. 12_Supplement (15 giugno 2022): 1972. http://dx.doi.org/10.1158/1538-7445.am2022-1972.
Testo completoZhang, Bing, e Michal Bassani-Sternberg. "Current perspectives on mass spectrometry-based immunopeptidomics: the computational angle to tumor antigen discovery". Journal for ImmunoTherapy of Cancer 11, n. 10 (ottobre 2023): e007073. http://dx.doi.org/10.1136/jitc-2023-007073.
Testo completoDanner, Rebecca, Michael Pereckas, Joseph Rouse, Amanda Wahhab e Robert B. Lochhead. "Expanded presentation of Lyme autoantigens and identification of a novel immunogenic CD4+ T cell epitope from Borrelia burgdorferiMCP4 in murine Lyme arthritis". Journal of Immunology 210, n. 1_Supplement (1 maggio 2023): 221.17. http://dx.doi.org/10.4049/jimmunol.210.supp.221.17.
Testo completoBichmann, Leon, Annika Nelde, Michael Ghosh, Lukas Heumos, Christopher Mohr, Alexander Peltzer, Leon Kuchenbecker et al. "MHCquant: Automated and Reproducible Data Analysis for Immunopeptidomics". Journal of Proteome Research 18, n. 11 (7 ottobre 2019): 3876–84. http://dx.doi.org/10.1021/acs.jproteome.9b00313.
Testo completoChavda, Vivek P., e Elrashdy M. Redwan. "SARS-CoV-2: Immunopeptidomics and Other Immunological Studies". Vaccines 10, n. 11 (21 novembre 2022): 1975. http://dx.doi.org/10.3390/vaccines10111975.
Testo completoCourcelles, Mathieu, Chantal Durette, Tariq Daouda, Jean-Philippe Laverdure, Krystel Vincent, Sébastien Lemieux, Claude Perreault e Pierre Thibault. "MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses". Journal of Proteome Research 19, n. 4 (28 febbraio 2020): 1873–81. http://dx.doi.org/10.1021/acs.jproteome.9b00859.
Testo completoBouzid, Rachid, Monique T. A. de Beijer, Robbie J. Luijten, Karel Bezstarosti, Amy L. Kessler, Marco J. Bruno, Maikel P. Peppelenbosch, Jeroen A. A. Demmers e Sonja I. Buschow. "Empirical Evaluation of the Use of Computational HLA Binding as an Early Filter to the Mass Spectrometry-Based Epitope Discovery Workflow". Cancers 13, n. 10 (12 maggio 2021): 2307. http://dx.doi.org/10.3390/cancers13102307.
Testo completoThibault, Pierre, e Claude Perreault. "Immunopeptidomics: Reading the Immune Signal That Defines Self From Nonself". Molecular & Cellular Proteomics 21, n. 6 (giugno 2022): 100234. http://dx.doi.org/10.1016/j.mcpro.2022.100234.
Testo completoPurcell, Anthony W., Sri H. Ramarathinam e Nicola Ternette. "Mass spectrometry–based identification of MHC-bound peptides for immunopeptidomics". Nature Protocols 14, n. 6 (15 maggio 2019): 1687–707. http://dx.doi.org/10.1038/s41596-019-0133-y.
Testo completoDanner, Rebecca, Michael Pereckas, Joseph Rouse, Amanda Wahhab e Robert Lochhead. "Immunopeptidomics analysis of Lyme arthritis: insights into infection and autoimmunity". Journal of Immunology 206, n. 1_Supplement (1 maggio 2021): 93.10. http://dx.doi.org/10.4049/jimmunol.206.supp.93.10.
Testo completoShapiro, Ilja E., e Michal Bassani-Sternberg. "The impact of immunopeptidomics: From basic research to clinical implementation". Seminars in Immunology 66 (marzo 2023): 101727. http://dx.doi.org/10.1016/j.smim.2023.101727.
Testo completoFaridi, Pouya, Anthony W. Purcell e Nathan Paul Croft. "In Immunopeptidomics We Need a Sniper Instead of a Shotgun". PROTEOMICS 18, n. 12 (7 marzo 2018): 1700464. http://dx.doi.org/10.1002/pmic.201700464.
Testo completoLi, Kai, Antrix Jain, Anna Malovannaya, Bo Wen e Bing Zhang. "DeepRescore: Leveraging Deep Learning to Improve Peptide Identification in Immunopeptidomics". PROTEOMICS 20, n. 21-22 (27 settembre 2020): 1900334. http://dx.doi.org/10.1002/pmic.201900334.
Testo completoVaughan, Kerrie, Etienne Caron, Bjoern Peters e Alessandro Sette. "The future of the immunopeptidome in health and disease: a comprehensive analysis of naturally processed ligand data". Journal of Immunology 196, n. 1_Supplement (1 maggio 2016): 46.4. http://dx.doi.org/10.4049/jimmunol.196.supp.46.4.
Testo completoPeltonen, Karita, Sara Feola, Husen M. Umer, Jacopo Chiaro, Georgios Mermelekas, Erkko Ylösmäki, Sari Pesonen, Rui M. M. Branca, Janne Lehtiö e Vincenzo Cerullo. "Therapeutic Cancer Vaccination with Immunopeptidomics-Discovered Antigens Confers Protective Antitumor Efficacy". Cancers 13, n. 14 (7 luglio 2021): 3408. http://dx.doi.org/10.3390/cancers13143408.
Testo completoShabani, Nor Raihan Mohammad, Che Muhammad Khairul Hisyam Ismail, Chiuan Herng Leow, Munirah Mokhtar, Kirnpal Kaur Banga Singh e Chiuan Yee Leow. "Identification of MHC Class II Immunopeptidomes from Shigella flexneri 2a-infected Macrophages as Potential Vaccine Candidates". Indonesian Biomedical Journal 14, n. 2 (28 giugno 2022): 139–47. http://dx.doi.org/10.18585/inabj.v14i2.1781.
Testo completoAbd El-Baky, Nawal, Amro A. Amara e Elrashdy M. Redwan. "HLA-I and HLA-II Peptidomes of SARS-CoV-2: A Review". Vaccines 11, n. 3 (25 febbraio 2023): 548. http://dx.doi.org/10.3390/vaccines11030548.
Testo completoKallor, Ashwin Adrian, Michał Waleron, Georges Bedran, Patrícia Eugénio, Catia Pesquita, Daniel Faria, Fabio Massimo Zanzotto, Christophe Battail, Ajitha Rajan e Javier Alfaro. "Abstract 6577: CARMEN: A pan-HLA and pan-cancer proteogenomic database on antigen presentation to support cancer immunotherapy". Cancer Research 83, n. 7_Supplement (4 aprile 2023): 6577. http://dx.doi.org/10.1158/1538-7445.am2023-6577.
Testo completoKlein, Joshua, Daniel Sprague, Monica Lane, Meghan Hart, Olivia Petrillo, Italo Faria do Valle, Matthew Davis et al. "Abstract 904: AI platform provides an EDGE and enables state-of-the-art identification of peptide-HLAs for the development of T cell inducing vaccines". Cancer Research 84, n. 6_Supplement (22 marzo 2024): 904. http://dx.doi.org/10.1158/1538-7445.am2024-904.
Testo completoStopfer, Lauren E., Jason E. Conage-Pough e Forest M. White. "Quantitative Consequences of Protein Carriers in Immunopeptidomics and Tyrosine Phosphorylation MS2 Analyses". Molecular & Cellular Proteomics 20 (2021): 100104. http://dx.doi.org/10.1016/j.mcpro.2021.100104.
Testo completoFritsche, Jens, Barbara Rakitsch, Franziska Hoffgaard, Michael Römer, Heiko Schuster, Daniel J. Kowalewski, Martin Priemer et al. "Translating Immunopeptidomics to Immunotherapy-Decision-Making for Patient and Personalized Target Selection". PROTEOMICS 18, n. 12 (10 aprile 2018): 1700284. http://dx.doi.org/10.1002/pmic.201700284.
Testo completoLi, Kai, Antrix Jain, Anna Malovannaya, Bo Wen e Bing Zhang. "Front Cover: DeepRescore: Leveraging Deep Learning to Improve Peptide Identification in Immunopeptidomics". PROTEOMICS 20, n. 21-22 (novembre 2020): 2070151. http://dx.doi.org/10.1002/pmic.202070151.
Testo completoPurcell, Anthony. "Mass spectrometry and immunopeptidomics – teaching us new lessons in antigen processing and presentation". Molecular Immunology 150 (ottobre 2022): 35. http://dx.doi.org/10.1016/j.molimm.2022.05.116.
Testo completoAbelin, Jennifer. "Abstract 1439 Mass spectrometry based immunopeptidomics as a tool for understanding antigen presentation". Journal of Biological Chemistry 300, n. 3 (marzo 2024): 106634. http://dx.doi.org/10.1016/j.jbc.2024.106634.
Testo completoMohsen, Mona O., Daniel E. Speiser, Justine Michaux, HuiSong Pak, Brian J. Stevenson, Monique Vogel, Varghese Philipose Inchakalody et al. "Bedside formulation of a personalized multi-neoantigen vaccine against mammary carcinoma". Journal for ImmunoTherapy of Cancer 10, n. 1 (gennaio 2022): e002927. http://dx.doi.org/10.1136/jitc-2021-002927.
Testo completoWilder, Brandon Keith, Luna de Lacerda, Camila R. R. Barbosa, Maya Aleshnick, Thomas Martinson, David Morrow, Zeshou Zhao, Gaurav Gaiha e Caroline Junqueira. "Malaria antigens are presented to CD8 T cells via the non-classical HLA-E". Journal of Immunology 208, n. 1_Supplement (1 maggio 2022): 170.27. http://dx.doi.org/10.4049/jimmunol.208.supp.170.27.
Testo completoMaringer, Yacine, Lena Freudenmann, Annika Nelde, Jonas S. Heitmann, Helmut R. Salih, Marissa Dubbelaar, Jörg Hennenlotter et al. "Abstract 3556: Immunopeptidomics-guided tumor antigen warehouse design and first clinical application of a personalized peptide vaccine for prostate cancer". Cancer Research 82, n. 12_Supplement (15 giugno 2022): 3556. http://dx.doi.org/10.1158/1538-7445.am2022-3556.
Testo completoSolleder, Marthe, Philippe Guillaume, Julien Racle, Justine Michaux, Hui-Song Pak, Markus Müller, George Coukos, Michal Bassani-Sternberg e David Gfeller. "Mass Spectrometry Based Immunopeptidomics Leads to Robust Predictions of Phosphorylated HLA Class I Ligands". Molecular & Cellular Proteomics 19, n. 2 (17 dicembre 2019): 390–404. http://dx.doi.org/10.1074/mcp.tir119.001641.
Testo completoAndreatta, Massimo, Annalisa Nicastri, Xu Peng, Gemma Hancock, Lucy Dorrell, Nicola Ternette e Morten Nielsen. "MS-Rescue: A Computational Pipeline to Increase the Quality and Yield of Immunopeptidomics Experiments". PROTEOMICS 19, n. 4 (18 gennaio 2019): 1800357. http://dx.doi.org/10.1002/pmic.201800357.
Testo completoFritsche, Jens, Barbara Rakitsch, Franziska Hoffgaard, Michael Römer, Heiko Schuster, Daniel J. Kowalewski, Martin Priemer et al. "Front Cover: Translating Immunopeptidomics to Immunotherapy-Decision-Making for Patient and Personalized Target Selection". PROTEOMICS 18, n. 12 (giugno 2018): 1870101. http://dx.doi.org/10.1002/pmic.201870101.
Testo completoStutzmann, Charlotte, Jiaxi Peng, Zhaoguan Wu, Christopher Savoie, Isabelle Sirois, Pierre Thibault, Aaron R. Wheeler e Etienne Caron. "Unlocking the potential of microfluidics in mass spectrometry-based immunopeptidomics for tumor antigen discovery". Cell Reports Methods 3, n. 6 (giugno 2023): 100511. http://dx.doi.org/10.1016/j.crmeth.2023.100511.
Testo completoTetens, Ashley R., Allison M. Martin, Antje Arnold, Orlandi V. Novak, Adrian Idrizi, Rakel Tryggvadottir, Jordyn Craig-Schwartz et al. "DIPG-58. TARGETING DISORDERED DNA METHYLATION IN DIPG TO CONSTRAIN VARIABILITY AND INDUCE IMMUNE SIGNALING". Neuro-Oncology 26, Supplement_4 (18 giugno 2024): 0. http://dx.doi.org/10.1093/neuonc/noae064.111.
Testo completoPyke, Rachel Marty, Steven Dea, Hima Anbunathan, Charles W. Abbott, Neeraja Ravi, Jason Harris, Gabor Bartha et al. "Abstract 5640: Mono-allelic immunopeptidomics data from 109 MHC-I alleles reveals variability in binding preferences and improves neoantigen prediction algorithm". Cancer Research 82, n. 12_Supplement (15 giugno 2022): 5640. http://dx.doi.org/10.1158/1538-7445.am2022-5640.
Testo completoLi, Chen, Jerico Revote, Sri H. Ramarathinam, Shan Zou Chung, Nathan P. Croft, Katherine E. Scull, Ziyi Huang et al. "Resourcing, annotating, and analysing synthetic peptides of SARS‐CoV‐2 for immunopeptidomics and other immunological studies". PROTEOMICS 21, n. 17-18 (14 aprile 2021): 2100036. http://dx.doi.org/10.1002/pmic.202100036.
Testo completoGraciotti, Michele, Fabio Marino, HuiSong Pak, Petra Baumgaertner, Anne-Christine Thierry, Johanna Chiffelle, Marta A. S. Perez et al. "Deciphering the Mechanisms of Improved Immunogenicity of Hypochlorous Acid-Treated Antigens in Anti-Cancer Dendritic Cell-Based Vaccines". Vaccines 8, n. 2 (2 giugno 2020): 271. http://dx.doi.org/10.3390/vaccines8020271.
Testo completoStopfer, L. E., A. D. D'Souza e F. M. White. "1,2,3, MHC: a review of mass-spectrometry-based immunopeptidomics methods for relative and absolute quantification of pMHCs". Immuno-Oncology and Technology 11 (ottobre 2021): 100042. http://dx.doi.org/10.1016/j.iotech.2021.100042.
Testo completoStopfer, L. E., A. D. D'Souza e F. M. White. "1,2,3, MHC: a review of mass-spectrometry-based immunopeptidomics methods for relative and absolute quantification of pMHCs". Immuno-Oncology and Technology 11 (ottobre 2021): 100042. http://dx.doi.org/10.1016/j.iotech.2021.100042.
Testo completoEly, Zackery A., William A. Freed-Pastor, Zachary J. Kulstad, Jennifer G. Abelin, Eva Verzani, Kevin S. Kapner, Susan Klaeger et al. "Abstract C014: Broadening the repertoire of PDAC-specific targets for immune-based therapy through high-resolution immunopeptidomics". Cancer Research 82, n. 22_Supplement (15 novembre 2022): C014. http://dx.doi.org/10.1158/1538-7445.panca22-c014.
Testo completoElAbd, Hesham, Frauke Degenhardt, Tomas Koudelka, Ann-Kristin Kamps, Andreas Tholey, Petra Bacher, Tobias L. Lenz, Andre Franke e Mareike Wendorff. "Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data". BMC Bioinformatics 22, n. 1 (17 agosto 2021). http://dx.doi.org/10.1186/s12859-021-04315-0.
Testo completoWacker, Marcel, Jens Bauer, Laura Wessling, Marissa Dubbelaar, Annika Nelde, Hans-Georg Rammensee e Juliane S. Walz. "Immunoprecipitation methods impact the peptide repertoire in immunopeptidomics". Frontiers in Immunology 14 (21 luglio 2023). http://dx.doi.org/10.3389/fimmu.2023.1219720.
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