Tesi sul tema "Cattle Breeding"
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Skrypzeck, Heidi. "An assessment of the contributions of Afrikaner, Hereford and Simmentaler in composite breed development in beef cattle". Thesis, Stellenbosch : Stellenbosch University, 2000. http://hdl.handle.net/10019.1/51591.
Testo completoENGLISH ABSTRACT: The objective of this study was to obtain more information regarding the characterisation of Afrikaner (A), Hereford (H) and Simmentaler (S) breeds in an initial crossbreeding programme and subsequent composite development. This involves the estimation of breed additive effects, breed maternal, individual heterotic effects and maternal heterotic effects in the initial crossbreeding phase and the estimation of genetic parameters and prediction of breeding values in later generations for birth weight (BW), weaning weight (WW) and cow efficiency (CE; WW/dam weight" 75 x 100) in an intensive environment under high stocking rates. In the analysis of the initial crossbreeding phase, the S breed direct effects, expressed as deviation from the general mean, were positive (P :s; 0.01) for both BW and WW. Hereford and A breed direct effects were negative (P :s; 0.01) for both BW and WW. Afrikaner direct maternal effects were positive (P :s; 0.01) for both BW and WW. The H direct maternal effect was negative (P :s; 0.05) (- 2.8%) for WW. Simmentaler maternal effect was negative (P :s; 0.01) for BW but non-significant (P ;:::0:.05) for WW. Individual heterotic effects for BW were significant (P:S; 0.01) in H x S (3.5%) and S x A (11.0%) only. Individual heterotic effects were positive (P :s; 0.01) for WW, with that of the H x A (9.8%) and S x A (6.7%) crosses exceeding the H x S (3.1%) cross. Maternal heterotic effects were non-significant (P ;:::0:.05) for both BW and WW. Investigations of the contributions of the A, Hand S during composite development in later generations, respectively, were made to estimate direct heritabilities (h2 a) and maternal heritabilities (h2 m) for BW and WW of the calf and CE of the dam. Calves were born between 1968 and 1993 (n = 52628). Calves of this composite population had varying levels of A, Hand S genes ranging from o to 75%, 0 to 100% and 0 to 96.9%, with an average of 4.3,19.3 and 33.4%, respectively. For the A, direct heritabilities fitting unitrait models were 0.67, 0.53 and 0.19 for BW, WW and CE, respectively, with corresponding estimates of h2mbeing 0.22, 0.36 and 0.58. Genetic correlations between direct and maternal effects (ram)were negative for all three traits, varying from -0.32 to - 0.62. Direct breeding values for BW increased and reached a maximum value at 0.11 proportion of A. The maternal breeding values for BW decreased linearly between 1.6 to 37.5% A proportion and increased linearly between 37.5 to 75% A proportion. For WW, the direct breeding values decreased linearly with increasing A proportion, while the maternal breeding values were not affected by proportion of A. Cow efficiency was unaffected by an increase in proportion of A. For the H, direct heritabilities fitting unitrait models were 0.67,0.52 and 0.21 for BW, WW and CE, respectively, with corresponding estimates of h2mbeing 0.22, 0.36 and 0.60. Genetic correlations between direct and maternal effects (ram)were negative for all three traits, varying from -0.32 to - 0.64. Direct breeding values and maternal breeding values for BW and WW decreased with increasing proportion of H. Direct breeding value for CE increased, while the maternal breeding value for CE reached minimum value at 0.62 proportion ofH. For the S, direct heritabilities fitting unitrait models were 0.66, 0.53 and 0.21 for BW, WW and CE, respectively, with corresponding estimates of h2m being 0.22, 0.36 and 0.59. Genetic correlations between direct and maternal effects (ram)were negative for all three traits, varying from -0.32 to - 0.63. Direct breeding values for BW and WW decreased and maternal breeding values increased with increasing proportion of S. Cow efficiency was unaffected by an increase in proportion of S. The study suggests that in the initial crossbreeding phase, purebred S breeding seems to be the best breeding practice for this environment and that during composite development, high A and H contributions could lead to low BW and WW (except the maternal contribution of the A for BW and WW). The advantage of the S lies more in the maternal contribution than in the direct contribution suggesting that the S is a large-framed maternal line rather than a terminal sire line.
AFRIKAANSE OPSOMMING: 'N WAARDEBEP ALING VAN DIE BYDRAE VAN DIE AFRIKANER, SIMMENTALER EN HEREFORD TYDENS KOMPOSIETE RASONTWIKKELING BY VLEISBEESTE: Die doel van die studie was om inligting aangaande die karakterisering van die Afrikaner (A), Hereford (H) en Simmentaler (S) rasse tydens die oorspronklike aanvangsfase van kruisteling en daaropvolgende komposiet ontwikkeling te verkry. Dit het die beraming van direkte additiewe, individuele heterose, direkte materne en materne heterotiese effekte tydens die aanvangsfase van die kruisteeltprogram, die beraming van genetiese parameters en die voorspelling van die teeltwaardes in latere generasies behels. Die eienskappe wat ingesluit is, is geboortegewig (BW), speengewig (WW) en koeidoeltreffendheid (CE; WW/koeigewigo.75 ). Hierdie kudde is in 'n intensiewe maar onder 'n hoë weidingsdruk omgewing aangehou. Tydens die ontleding van die eerste kruisteeltfase is die direkte additiewe effekte vir die S, uitgedruk as afwyking van die algemene gemiddelde, vir beide BW en WW positief (P ~ 0.01). Direkte additiewe effekte vir die H en A was vir beide BW en WW negatief (P ~ 0.01). Afrikaner materne effekte was vir beide BW en WW (P ~ 0.01) positief. Die H direkte materne effekte was negatief (-2.8%) (P ~ 0.05) vir WW. Simmentaler maternal effekte was ook vir BW negatief (P ~ 0.01), maar nie-betekenisvol (P 20.05) vir WW. Individuele heterose was slegs betekenisvol (P ~ 0.01) vir kombinasies van H x S (3.5%) en S x H (11.0%) vir BW. Individuele heterose was positief (P ~ 0.01) vir WW waar H x A (9.8%) en S x A (6.7%) kruisings dié van die H x S (3.1%) kruising oortrefhet. Materne heterose was vir beide BW en WW nie-betekenisvol (P 2 0.05). Die relatiewe bydraes van die A, H en S is ook tydens komposiet-ontwikkeling bereken. Direkte additiewe oorerflikhede (h2 a) en materne oorerflikhede (h2m) is vir BW en WW van die kalf en CE van die koei beraam. Kalwers in die komposiet kudde, gebore tussen 1968 en 1993 (n = 52628), het variërende vlakke van A, H en S gene. Die samestelling het gevarieer van 0 - 75%, 0 - 100% en 0 - 96.9%, met 'n gemiddeld van 4.3, 19.3 en 33.4%. Vir die A was die direkte erfbaarhede (h2 a), soos deur die passing van 'n enkeleienskapmodel beraam, 0.67, 0.53 en 0.19 vir onderskeidelik BW, WW en CE, met ooreenstemmende beramings van 0.22, 0.36 en 0.58 vir h2 rn- Genetiese korrelasies tussen direkte en mateme effekte (ram)was almal negatief en het tussen -0.32 en -0.62 gewissel. Direkte teelwaardes vir BW het met toenemende A-bydrae gestyg en het 'n maksimum waarde by 0.11 bereik. Die mateme teelwaardes vir BW het lineêr gedaal tussen 1.6 en 37.5% A-bydrae en het weer lineêr tussen 37.5 en 75% Abydrae gestyg. Vir WW het die direkte teelwaardes lineêr met toenemende A-bydrae gestyg, terwyl die mateme teelwaardes nie deur A-bydrae beïnvloed was nie. Koeidoeltreffendheid was nie deur 'n toename in A-bydrae beïnvloed nie. Vir die H was die direkte erfbaarhede (h2 a), soos deur die passing van 'n enkeleienskapmodel beraam 0.67, 0.52 en 0.21 vir onderskeidelik BW, WW en CE, met ooreenstemmende beramings van 0.22, 0.36 en 0.60 vir h2 rn- Genetiese korrelasies tussen direkte en mateme effekte (ram)was almal negatief en het tussen -0.32 en -0.64 gewissel. Direkte teelwaardes en mateme teelwaardes vir BW en WW het met toenemende H-bydrae gedaal. Direkte teelwaarde vir CE het ook met toenemende If-bydrae gedaal, terwyl die mateme teelwaarde 'n minimum waarde by 0.62 H-bydrae bereik het. Vir die S was die direkte erfbaarhede (h2a), soos deur die passing van 'n enkeleienskapmodel beraam 0.66, 0.53 en 0.21 vir onderskeidelik BW, WW en CE, met ooreenstemmende beramings van 0.22, 0.36 en 0.59 vir h2 m- Genetiese korrelasies tussen direkte en mateme effekte (ram)was almal negatief en het tussen -0.32 en -0.63 gewissel. Direkte teelwaardes vir BW en WW het gedaal, terwyl die mateme teelwaardes met toenemende S-bydrae gestyg het. Koeidoeltreffendheid was nie deur 'n toename in S-bydrae beïnvloed nie. Die bevinding was dat tydens die ontleding van die eerste kruisteeltfase die teling van suiwer S aanbeveel word en dat tydens komposiete-ontwikkeling toenemende A- en H-bydraes neig om aanleiding te gee tot afnames in BW en WW (behalwe die mateme bydrae van die A vir BW en WW). Die S-bydrae se voordeel is meer in die mateme bydrae as in die direkte bydrae geleë en dui dus aan dat die S as 'n mateme grootraam lyn i.p.v. as 'n terminale bullyn gebruik moet word.
Matjuda, Lehotlo Ephraim. "Development breeding objectives for the nguni cattle breed in South Africa". Thesis, University of Limpopo (Turfloop Campus), 2012. http://hdl.handle.net/10386/862.
Testo completoAfolayan, Raphael Abiodun. "Genetics of growth and development in cattle". Title page, table of contents and abstract only, 2003. http://web4.library.adelaide.edu.au/theses/09PH/09pha2579.pdf.
Testo completoMazhar, Kehkashan. "Molecular genetic markers for selection and genome mapping in cattle". Thesis, University of Reading, 1994. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.260797.
Testo completoMeacham, Nancy S. "Heritability estimates for calving date in Simmental cattle". Thesis, Virginia Tech, 1987. http://hdl.handle.net/10919/45782.
Testo completoMaster of Science
Brown, Timothy P. (Timothy Phillip). "Selection indices in retrospect for dairy cattle". Thesis, McGill University, 1989. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=59266.
Testo completoGreen, Ronald T. "Evaluation of optimum and near optimum pair selection methods for increasing predicted relative net income in Jersey cattle". Thesis, Virginia Tech, 1987. http://hdl.handle.net/10919/45650.
Testo completoTo evaluate the importance of non-linear relationships between Relative net income per day of productive life (RNI/DPL) and individual traits, 921,915 potential offspring were simulated from all possible matings of 20,487 Jersey cows and 45 active AI sires. Predicted milk yield, fat yield, and 13 linear type traits of potential progeny were used to predict RNI/DPL of all potential progeny.
Five methods of mate selection and pairing were evaluated for their effectiveness in choosing mates and the amount of computer time required to choose those pairings. Results of a linear programming (LP) method were used as a comparison for the other four more easily applied methods. Two of the other four methods were not significantly (P > .01) different from the LP method. Although the random pairing method was significantly different, similarity of results, for this method indicated non-linear relationships between RNI/DPL and individual trait scores are of minor importance. A11 four methods used considerable less computer time than the LP method.
Analysis of variance for predicted RNI/DPL (all possible offspring) indicated herd, dam within herd, sire, and inbreeding class to be significant (P < .01) variables in determining RNI/DPL. However the sire by dam within herd interaction did not significantly affect RNI/DPL, again indicating non-linear relationships between traits and RNI/DPL were not very important.
Regressing PDâ s, Clâ s, and their crossproducts for milk yield, fat yield, and 13 linear type traits showed the relative importance of crossproducts to be minimal in comparison to the linear ellects of parental genetic evaluations.
Master of Science
Mitchell, Jay Douglas. "An Economic Assessment of Genetic Information: Leptin Genotyping of Breeding Cattle". Thesis, North Dakota State University, 2006. https://hdl.handle.net/10365/29904.
Testo completoBotha, Theunis Christoffel. "Effect of selected physical and production traits on the tick burdens of beef cattle". Thesis, Port Elizabeth Technikon, 2002. http://hdl.handle.net/10948/91.
Testo completoGotschi, Manuela. "The use of blood metabolic concentrations as indicators of the metabolic and productive status in dairy cows". Diss., Pretoria : [s.n.], 2000. http://upetd.up.ac.za/thesis/available/etd-01312008-145827.
Testo completoHossain, Khandaker Bayazid. "STATISTICAL GENETIC STUDY ON CATTLE BREEDING FOR DAIRY PRODUCTIVITY IN BANGLADESH". Kyoto University, 2000. http://hdl.handle.net/2433/151599.
Testo completo0048
新制・課程博士
博士(農学)
甲第8568号
農博第1151号
新制||農||810(附属図書館)
学位論文||H12||N3447(農学部図書室)
UT51-2000-M32
京都大学大学院農学研究科応用生物科学専攻
(主査)教授 佐々木 義之, 教授 守屋 和幸, 教授 矢野 秀雄
学位規則第4条第1項該当
Perotto, Daniel. "Additive and nonadditive genetic effects on growth and milk production traits in Holstein Ayrshire crossbreeding experimental data". Thesis, McGill University, 1992. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=70266.
Testo completoThe growth traits (asymptotic weight (A), rate parameter (k), inflection parameter (m), average lifetime absolute growth rate (AGR), average lifetime absolute maturing rate (AMR) and average lifetime relative growth rate (RGR)) were estimated by fitting the nonlinear equation, W$ sb1$ = A(1 $ pm$ be$ sp{ rm -kt}) sp{ rm M}$, to the observed weight-age data of 3076 individual females.
Results from the analyses of growth traits indicated that the H line exceeded the A line in addition genetic effects for individual performance (a$ sp{ rm I}$) for both A and AGR. The H line also exceeded the A line in additive effects for maternal performance (a$ sp{ rm M}$) in trait A. Both dominance (d) and additive x additive (aa) epistatic effects were statistically important in most cases. Individual heterosis (h$ sp{ rm I}$ = d$ sp{ rm I}$ $-$ 0.5aa$ sp{ rm I}$) was positive for traits A and AGR, whereas maternal heterosis (h$ sp{ rm M}$ = d$ sp{ rm M}$ $-$ 0.5aa$ sp{ rm M}$) was negative for A and positive for AMR. Total heterosis (TH = h$ sp{ rm I}$ + h$ sp{ rm M}$) had positive effects on AGR and AMR. For all growth traits, heterosis retained in advanced crossbred generations was statistically irrelevant. The overall conclusion was that crossbreeding systems designed to capitalize on TH would produce faster growing and earlier maturing animals.
The analyses of production traits found the additive effect of the H line for individual performance to be a major factor to increase yields of milk, protein and fat. On the other hand, line maternal and cytoplasmic source tended to favour the A line, but none reached statistical significance in any of the traits. Results indicate that two-line specific crosses or synthetic development would be sound breeding strategies for taking advantage of first cross heterosis or of line additive differences, respectively.
Estimates of crossbreeding parameters from mixed-model analyses, were found to be more reliable than those from ordinary least squares analyses. (Abstract shortened by UMI.)
Sinclair, Kevin D. "Metabolism in cattle and regulation of anterior pituitary hormone release". Thesis, University of Aberdeen, 1996. http://digitool.abdn.ac.uk/R?func=search-advanced-go&find_code1=WSN&request1=AAIU079035.
Testo completoUlutas, Zafer. "Production traits and market values of Welsh black cattle". Thesis, Bangor University, 1998. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.262765.
Testo completoDiaz-Martin, Clara. "Correlation of predicted breeding values across environments in the presence of selection for direct and maternal breeding values". Diss., Virginia Tech, 1992. http://hdl.handle.net/10919/39438.
Testo completoPh. D.
Todd, Darren Lindsay. "Implementation of genomic selection in UK beef and sheep breeding". Thesis, University of Edinburgh, 2013. http://hdl.handle.net/1842/8766.
Testo completoTosi, Hugo Ricardo. "Dairy cattle breeding performance when grazing the high protein pastures of Uruguay". Thesis, National Library of Canada = Bibliothèque nationale du Canada, 1999. http://www.collectionscanada.ca/obj/s4/f2/dsk2/ftp03/NQ35047.pdf.
Testo completoShadwick, Mark. "An investigation of the MLC beef bull index". Thesis, University of Newcastle Upon Tyne, 1992. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.386691.
Testo completoPersson, Ylva. "Breeding soundness evaluation of young beef bulls /". Uppsala : Dept. of Clinical Sciences, Swedish University of Agricultural Sciences, 2007. http://epsilon.slu.se/200718.pdf.
Testo completoHird, Wendy Louise. "The effect of milk pricing on genetic selection goals in British Columbia and Quebec dairy cattle populations". Thesis, University of British Columbia, 1985. http://hdl.handle.net/2429/24683.
Testo completoLand and Food Systems, Faculty of
Graduate
Nugent, Russell Arthur. "Analysis of newborn calf body measurements and relationship of calf shape to sire breeding values for birth weight and calving ease". Diss., This resource online, 1990. http://scholar.lib.vt.edu/theses/available/etd-07282008-135956/.
Testo completoSkinner, John. "A dairy cattle breeding and management computer simulation program for teaching and research". Thesis, University of British Columbia, 1986. http://hdl.handle.net/2429/26076.
Testo completoLand and Food Systems, Faculty of
Graduate
Stella, Alessandra. "Strategies for applying marker assisted selection in nucleus breeding schemes in dairy cattle". Thesis, National Library of Canada = Bibliothèque nationale du Canada, 2001. http://www.collectionscanada.ca/obj/s4/f2/dsk3/ftp04/NQ56295.pdf.
Testo completoHolgate, Katheryn T., e University of Lethbridge Faculty of Arts and Science. "The effects of cattle grazing on the breeding biology of riparian forest birds". Thesis, Lethbridge, Alta. : University of Lethbridge, Faculty of Arts and Science, 1999, 1999. http://hdl.handle.net/10133/349.
Testo completo29 cm.
Krebs, Elizabeth Ann. "Reproduction in the cattle egret (Bubulcus ibis ibis) : the function of breeding plumes". Thesis, McGill University, 1991. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=60507.
Testo completoMrode, Raphael Aweyevu. "Genetic response to selection for rate and efficiency of lean gain in beef cattle". Thesis, University of Edinburgh, 1988. http://hdl.handle.net/1842/15445.
Testo completoMogale, Moneri Sanah. "The use of indigenous knowledge in beef cattle husbandry in Tshebela Village, Limpopo Province". Thesis, University of Limpopo, 2017. http://hdl.handle.net/10386/1959.
Testo completoThere is a gap in the literature about the role and relevance of Indigenous Knowledge and beef cattle welfare in many parts of the Limpopo province. This gap is relevant because many marginalised cattle owners use indigenous knowledge in their day to day management of beef cattle. The aim of the study is to investigate the use of IK methods on beef cattle husbandry in Tshebela village in the Capricorn district of the Limpopo province as a contribution to filling the void identified above. The objectives of the study were as follows: -To investigate the IK methods used in beef cattle husbandry in the area of the study; -To assess if beef farmers use IK to identify medicinal plants to cure beef cattle; -To investigate farmers‘ perceptions and attitudes on the use of IKS on beef cattle husbandry in the area of study. A qualitative methodology that was used was primarily phenomenological in design. A purposive sampling technique was used and twenty seven (27) traditional beef farmers, two (2) local herbalists were recruited as participants. Data was collected through focus group discussions, key informant interviews, and observations. An interpretative phenomenological-based analysis was used to surface the role and relevance of indigenous knowledge in beef cattle husbandry. The findings suggest that indigenous knowledge is used by cattle owners alongside modern knowledge and that communal farming posed some challenges to the farmers.
Sianangama, Pharaoh Collins. "Effects of human chorionic gonadotropin administration at various times following breeding on corpus luteum number, diameter, progesterone profiles and pregnancy rates in dairy cattle". Thesis, University of British Columbia, 1990. http://hdl.handle.net/2429/28745.
Testo completoLand and Food Systems, Faculty of
Graduate
Li, Suiyang. "Establishment of an inbreeding index in Holstein dairy cattle using DNA fingerprinting". Thesis, McGill University, 1993. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=69763.
Testo completoKearney, John Francis. "Incorporation of new techniques in animal breeding programmes, with an emphasis on dairy cattle". Thesis, University of Edinburgh, 2006. http://hdl.handle.net/1842/28328.
Testo completoBoukha, Aziza. "Genetic aspects of beef quality in Piemontese cattle and relations with breeding goal traits". Doctoral thesis, Università degli studi di Padova, 2008. http://hdl.handle.net/11577/3425501.
Testo completoTauck, Shaun Austin. "Factors associated with the biostimulatory effect of bulls on resumption of ovarian cycling activity and breeding performance of first-calf suckled beef cows". Thesis, Montana State University, 2005. http://etd.lib.montana.edu/etd/2005/tauck/TauckS0505.pdf.
Testo completoBrown, Christopher Mark. "The application of recently developed techniques to Welsh Black Cattle in a group breeding scheme". Thesis, Bangor University, 1990. https://research.bangor.ac.uk/portal/en/theses/the-application-of-recently-developed-techniques-to-welsh-black-cattle-in-a-group-breeding-scheme(01ac6838-eb2d-4b05-9927-01574b3b68e2).html.
Testo completoOuma, Emily Awuor [Verfasser]. "Economic valuation of phenotypic cattle trait preferences in trypanosomosis prevalent production systems of Eastern Africa : implications for sustainable cattle breeding programs / Emily Awuor Ouma". Kiel : Universitätsbibliothek Kiel, 2008. http://d-nb.info/1019631376/34.
Testo completoAlmeida, Rodrigo de. "Study of abnormal test-days in Quebec Holstein cows". Thesis, McGill University, 1996. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=23995.
Testo completoDo, Changhee. "Improvement in accuracy using records lacking sire information in the animal model". Diss., Virginia Tech, 1992. http://hdl.handle.net/10919/39430.
Testo completoIlatsia, Evans D. [Verfasser], e Zárate Anne [Akademischer Betreuer] Valle. "Breeding strategies for Sahiwal cattle genetic resources in Kenya / Evans D. Ilatsia. Betreuer: Anne Valle Zárate". Hohenheim : Kommunikations-, Informations- und Medienzentrum der Universität Hohenheim, 2011. http://d-nb.info/1027291856/34.
Testo completoWilliams, Anwen. "The use of herd data to teach dairy cattle breeding in further and higher education contexts". Thesis, Bangor University, 2005. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.421675.
Testo completoAhmad, Sausan. "Application of BLUP in prediction of breeding values and estimation of SNP effects in dairy cattle". Thesis, University of Nottingham, 2011. http://eprints.nottingham.ac.uk/12006/.
Testo completoSchierenbeck, Sven Verfasser], Henner [Akademischer Betreuer] [Simianer e Hermann [Akademischer Betreuer] Swalve. "Controlling of dairy cattle breeding programs / Sven Schierenbeck. Gutachter: Henner Simianer ; Hermann Swalve. Betreuer: Henner Simianer". Göttingen : Niedersächsische Staats- und Universitätsbibliothek Göttingen, 2012. http://d-nb.info/1043765387/34.
Testo completoEspigolan, Rafael [UNESP]. "Parametric and semi-parametric models for predicting genomic breeding values of complex traits in Nelore cattle". Universidade Estadual Paulista (UNESP), 2017. http://hdl.handle.net/11449/149846.
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Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
O melhoramento genético animal visa melhorar a produtividade econômica das futuras gerações de espécies domésticas por meio da seleção. A maioria das características de interesse econômico na pecuária é de expressão quantitativa e complexa, isto é, são influenciadas por vários genes e afetadas por fatores ambientais. As análises estatísticas de informações de fenótipo e pedigree permite estimar os valores genéticos dos candidatos à seleção com base no modelo infinitesimal. Uma grande quantidade de dados genômicos está atualmente disponível para a identificação e seleção de indivíduos geneticamente superiores com o potencial de aumentar a acurácia de predição dos valores genéticos e, portanto, a eficiência dos programas de melhoramento genético animal. Vários estudos têm sido conduzidos com o objetivo de identificar metodologias apropriadas para raças e características específicas, o que resultará em estimativas de valores genéticos genômicos (GEBVs) mais acurados. Portanto, o objetivo deste estudo foi verificar a possibilidade de aplicação de modelos semiparamétricos para a seleção genômica e comparar a habilidade de predição com os modelos paramétricos para dados reais (características de carcaça, qualidade da carne, crescimento e reprodutiva) e simulados. As informações fenotípicas e de pedigree utilizadas foram fornecidas por onze fazendas pertencentes a quatro programas de melhoramento genético animal. Para as características de carcaça e qualidade da carne, o banco de dados continha 3.643 registros para área de olho de lombo (REA), 3.619 registros para espessura de gordura (BFT), 3.670 registros para maciez da carne (TEN) e 3.378 observações para peso de carcaça quente (HCW). Um total de 825.364 registros para peso ao sobreano (YW) e 166.398 para idade ao primeiro parto (AFC) foi utilizado para as características de crescimento e reprodutiva. Genótipos de 2.710, 2.656, 2.749, 2.495, 4.455 e 1.760 animais para REA, BFT, TEN, HCW, YW e AFC foram disponibilizados, respectivamente. Após o controle de qualidade, restaram dados de, aproximadamente, 450.000 polimorfismos de base única (SNP). Os modelos de análise utilizados foram BLUP genômico (GBLUP), single-step GBLUP (ssGBLUP), Bayesian LASSO (BL) e as abordagens semiparamétricas Reproducing Kernel Hilbert Spaces (RKHS) e Kernel Averaging (KA). Para cada característica foi realizada uma validação cruzada composta por cinco “folds” e replicada aleatoriamente trinta vezes. Os modelos estatísticos foram comparados em termos do erro do quadrado médio (MSE) e acurácia de predição (ACC). Os valores de ACC variaram de 0,39 a 0,40 (REA), 0,38 a 0,41 (BFT), 0,23 a 0,28 (TEN), 0,33 a 0,35 (HCW), 0,36 a 0,51 (YW) e 0,49 a 0,56 (AFC). Para todas as características, os modelos GBLUP e BL apresentaram acurácias de predição similares. Para REA, BFT e HCW, todos os modelos apresentaram ACC similares, entretanto a regressão RKHS obteve o melhor ajuste comparado ao KA. Para características com maior quantidade de registros fenotípicos comparada ao número de animais genotipados (YW e AFC) o modelo ssGBLUP é indicado. Considerando o desempenho geral, para todas as características estudadas, a regressão RKHS é, particularmente, uma alternativa interessante para a aplicação na seleção genômica, especialmente para características de baixa herdabilidade. No estudo de simulação, genótipos, pedigree e fenótipos para quatro características (A, B, C e D) foram simulados utilizando valores de herdabilidade baseados nos obtidos com os dados reais (0,09, 0,12, 0,36 e 0,39 para cada característica, respectivamente). O genoma simulado consistiu de 735.293 marcadores e 1.000 QTLs distribuídos aleatoriamente por 29 pares de autossomos, com comprimento variando de 40 a 146 centimorgans (cM), totalizando 2.333 cM. Assumiu-se que os QTLs explicavam 100% da variação genética. Considerando as frequências do alelo menor maiores ou iguais a 0,01, um total de 430.000 marcadores foram selecionados aleatoriamente. Os fenótipos foram obtidos pela soma dos resíduos (aleatoriamente amostrados de uma distribuição normal com média igual a zero) aos valores genéticos verdadeiros, e todo o processo de simulação foi replicado 10 vezes. A ACC foi calculada por meio da correlação entre o valor genético genômico estimado e o valor genético verdadeiro, simulados da 12a a 15a geração. A média do desequilíbrio de ligação, medido entre os pares de marcadores adjacentes para todas as características simuladas foi de 0,21 para as gerações recentes (12a, 13a e 14a), e 0,22 para a 15a geração. A ACC para as características simuladas A, B, C e D variou de 0,43 a 0,44, 0,47 a 0,48, 0,80 a 0,82 e 0,72 a 0,73, respectivamente. Diferentes metodologias de seleção genômica implementadas neste estudo mostraram valores similares de acurácia de predição, e o método mais adequado é dependente da característica explorada. Em geral, as regressões RKHS obtiveram melhor desempenho em termos de ACC com menor valor de MSE em comparação com os outros modelos.
Animal breeding aims to improve economic productivity of future generations of domestic species through selection. Most of the traits of economic interest in livestock have a complex and quantitative expression i.e. are influenced by a large number of genes and affected by environmental factors. Statistical analysis of phenotypes and pedigree information allows estimating the breeding values of the selection candidates based on infinitesimal model. A large amount of genomic data is now available for the identification and selection of genetically superior individuals with the potential to increase the accuracy of prediction of genetic values and thus, the efficiency of animal breeding programs. Numerous studies have been conducted in order to identify appropriate methodologies to specific breeds and traits, which will result in more accurate genomic estimated breeding values (GEBVs). Therefore, the objective of this study was to verify the possibility of applying semi-parametric models for genomic selection and to compare their ability of prediction with those of parametric models for real (carcass, meat quality, growth and reproductive traits) and simulated data. The phenotypic and pedigree information used were provided by farms belonging to four animal breeding programs which represent eleven farms. For carcass and meat quality traits, the data set contained 3,643 records for rib eye area (REA), 3,619 records for backfat thickness (BFT), 3,670 records for meat tenderness (TEN) and 3,378 observations for hot carcass weight (HCW). A total of 825,364 records for yearling weight (YW) and 166,398 for age at first calving (AFC) were used as growth and reproductive traits of Nelore cattle. Genotypes of 2,710, 2,656, 2,749, 2,495, 4,455 and 1,760 animals were available for REA, BFT, TEN, HCW, YW and AFC, respectively. After quality control, approximately 450,000 single nucleotide polymorphisms (SNP) remained. Methods of analysis were genomic BLUP (GBLUP), single-step GBLUP (ssGBLUP), Bayesian LASSO (BL) and the semi-parametric approaches Reproducing Kernel Hilbert Spaces (RKHS) regression and Kernel Averaging (KA). A five-fold cross-validation with thirty random replicates was carried out and models were compared in terms of their prediction mean squared error (MSE) and accuracy of prediction (ACC). The ACC ranged from 0.39 to 0.40 (REA), 0.38 to 0.41 (BFT), 0.23 to 0.28 (TEN), 0.33 to 0.35 (HCW), 0.36 to 0.51 (YW) and 0.49 to 0.56 (AFC). For all traits, the GBLUP and BL models showed very similar prediction accuracies. For REA, BFT and HCW, models provided similar prediction accuracies, however RKHS regression had the best fit across traits considering multiple-step models and compared to KA. For traits which have a higher number of animals with phenotypes compared to the number of those with genotypes (YW and AFC), the ssGBLUP is indicated. Judged by overall performance, across all traits, the RKHS regression is particularly appealing for application in genomic selection, especially for low heritability traits. Simulated genotypes, pedigree, and phenotypes for four traits A, B, C and D were obtained using heritabilities based on real data (0.09, 0.12, 0.36 and 0.39 for each trait, respectively). The simulated genome consisted of 735,293 markers and 1,000 QTLs randomly distributed over 29 pairs of autosomes, with length varying from 40 to 146 centimorgans (cM), totaling 2,333 cM. It was assumed that QTLs explained 100% of genetic variance. Considering Minor Allele Frequencies greater or equal to 0.01, a total of 430,000 markers were randomly selected. The phenotypes were generated by adding residuals, randomly drawn from a normal distribution with mean equal to zero, to the true breeding values and all simulation process was replicated 10 times. ACC was quantified using correlations between the predicted genomic breeding value and true breeding values simulated for the generations of 12 to 15. The average linkage disequilibrium, measured between pairs of adjacent markers for all simulated traits was 0.21 for recent generations (12, 13 and 14), and 0.22 for generation 15. The ACC for simulated traits A, B, C and D ranged from 0.43 to 0.44, 0.47 to 0.48, 0.80 to 0.82 and 0.72 to 0.73, respectively. Different genomic selection methodologies implemented in this study showed similar accuracies of prediction, and the optimal method was sometimes trait dependent. In general, RKHS regressions were preferable in terms of ACC and provided smallest MSE estimates compared to other models.
FAPESP: 2014/00779-0
FAPESP: 2015/13084-3
Espigolan, Rafael. "Parametric and semi-parametric models for predicting genomic breeding values of complex traits in Nelore cattle /". Jaboticabal, 2017. http://hdl.handle.net/11449/149846.
Testo completoCoorientador: Daniel Gustavo Mansan Gordo
Banca: Lenira El Faro Zadra
Banca: Ricardo Vieira Ventura
Banca: Danisio Prado Munari
Banca: Gerardo Alves Fernandes Júnior
Resumo: O melhoramento genético animal visa melhorar a produtividade econômica das futuras gerações de espécies domésticas por meio da seleção. A maioria das características de interesse econômico na pecuária é de expressão quantitativa e complexa, isto é, são influenciadas por vários genes e afetadas por fatores ambientais. As análises estatísticas de informações de fenótipo e pedigree permite estimar os valores genéticos dos candidatos à seleção com base no modelo infinitesimal. Uma grande quantidade de dados genômicos está atualmente disponível para a identificação e seleção de indivíduos geneticamente superiores com o potencial de aumentar a acurácia de predição dos valores genéticos e, portanto, a eficiência dos programas de melhoramento genético animal. Vários estudos têm sido conduzidos com o objetivo de identificar metodologias apropriadas para raças e características específicas, o que resultará em estimativas de valores genéticos genômicos (GEBVs) mais acurados. Portanto, o objetivo deste estudo foi verificar a possibilidade de aplicação de modelos semiparamétricos para a seleção genômica e comparar a habilidade de predição com os modelos paramétricos para dados reais (características de carcaça, qualidade da carne, crescimento e reprodutiva) e simulados. As informações fenotípicas e de pedigree utilizadas foram fornecidas por onze fazendas pertencentes a quatro programas de melhoramento genético animal. Para as características de carcaça e qualidade da carne, o banco de da... (Resumo completo, clicar acesso eletrônico abaixo)
Abstract: Animal breeding aims to improve economic productivity of future generations of domestic species through selection. Most of the traits of economic interest in livestock have a complex and quantitative expression i.e. are influenced by a large number of genes and affected by environmental factors. Statistical analysis of phenotypes and pedigree information allows estimating the breeding values of the selection candidates based on infinitesimal model. A large amount of genomic data is now available for the identification and selection of genetically superior individuals with the potential to increase the accuracy of prediction of genetic values and thus, the efficiency of animal breeding programs. Numerous studies have been conducted in order to identify appropriate methodologies to specific breeds and traits, which will result in more accurate genomic estimated breeding values (GEBVs). Therefore, the objective of this study was to verify the possibility of applying semi-parametric models for genomic selection and to compare their ability of prediction with those of parametric models for real (carcass, meat quality, growth and reproductive traits) and simulated data. The phenotypic and pedigree information used were provided by farms belonging to four animal breeding programs which represent eleven farms. For carcass and meat quality traits, the data set contained 3,643 records for rib eye area (REA), 3,619 records for backfat thickness (BFT), 3,670 records for meat tenderness (... (Complete abstract click electronic access below)
Doutor
Rosati, Giulio. "Design, characterization and validation of an innovative biosensor for illegal hypertrophy treatments detection in cattle breeding". Doctoral thesis, Università degli studi di Padova, 2015. http://hdl.handle.net/11577/3424204.
Testo completoIl lavoro svolto durante questo dottorato di ricerca e riassunto in questa tesi ha avuto l'obiettivo di progettare, realizzare e caratterizzare un sistema unificato per la rilevazione di trattamenti anabolizzanti sui capi di bestiame bovini da carne, indipendentemente dalla sostanza utilizzata per i trattamenti. La tecnologia ideata consente di effettuare gli esami in modo molto più rapido che con i sistemi tradizionali e direttamente sul campo, su campioni d'urina dell'animale. Il suo principale punto di forza è l'indipendenza dal tipo di sostanza utilizzata che la rende ottimale per essere utilizzata come tecnica di screening. Una volta individuati gli animali trattati mediante il sistema, sarà possibile andare ad identificare e quantificare la sostanza anabolizzante mediante le tecniche standard di analisi. Tale indipendenza è ottenuta cambiando il paradigma di rilevazione delle sostanze e basandolo sull'effetto ipertrofico che queste hanno in vitro su una coltura di cellule miogeniche. L'effetto ipertrofico attiva nella linea cellulare miogenica, dotata dei recettori per le sostanze anabolizzanti e geneticamente modificata allo scopo, la sovraproduzione di acido lattico, che viene rilasciato dalla cellula nel mezzo. Qui l'acido lattico viene quindi quantificato da un biosensore elettrochimico enzimatico, grazie al quale è possibile ottenerne una veloce e precisa quantificazione con un'apparato di misura economico e miniaturizzabile. La quantificazione della concentrazione di acido lattico prodotto dalle cellule consente, a ritroso, di individuare la presenza di sostanze anabolizzanti nel campione d'urina dell'animale.
Holm, Dietmar Erik. "The economic effects of an oestrus synchronisation protocol using prostaglandin and reproductive tract scoring in beef heifers in South Africa". Electronic thesis, 2006. http://upetd.up.ac.za/thesis/available/etd-05042007-162414/.
Testo completoYilmaz, Ahmet. "VARIANCE COMPONENT ESTIMATION FOR REPRODUCTIVE TRAITS AND ANALYSES OF MYOFIBRILLAR PROTEINS AND AGE AT PUBERTY IN ANGUS BEEF CATTLE DIVERGENTLY SELECTED FOR BLOOD SERUM INSULIN-LIKE GROWTH FACTOR I CONCENTRATION". The Ohio State University, 2003. http://rave.ohiolink.edu/etdc/view?acc_num=osu1041608790.
Testo completoStrasser, Mark. "The development of a fuzzy decision-support system for dairy cattle culling decisions". Thesis, National Library of Canada = Bibliothèque nationale du Canada, 1997. http://www.collectionscanada.ca/obj/s4/f2/dsk2/ftp01/MQ29794.pdf.
Testo completoArcher, Alfred Ainsley. "A framework to integrate and analyse industry-wide information for on-farm decision making in dairy cattle breeding /". Thesis, McGill University, 2000. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=36749.
Testo completoThe first objective was achieved by following a systems approach---defining a goal, boundary, functions, structure and performance---to describe multi-organisational information systems and, specifically, a DBIS in the Canadian dairy industry. Using this framework, the subsequent analysis of the DBIS looked at its overall effectiveness. The DBIS was also compared with other known systems, where the number of participants (as well as their roles) differs from the Canadian situation. Improvements were suggested for the Canadian DBIS by focussing on the decision-maker's ability to retrieve, integrate and consider required information through information technologies. The second objective involved using the systems approach to investigate the kinds of information (if any) provided on Web sites of the DBIS participants, and to see if the Internet could be exploited to improve this process, either in terms of improved transfer speed or data transformation. It was established that the Internet is being used for rapid, flexible access to support information by DBIS participants, but that it is being under-utilised, particularly where herd output information is concerned. Herd output information could be filtered, integrated and transformed to support specific user needs at appropriate levels of intelligence density. It was further postulated that these data could be exploited more effectively through the use of such information technologies as common data exchange mechanisms and decision-support systems. The third objective was achieved through applying information engineering methods to develop a data model to represent the DBIS. This unified model was described in conceptual, logical and physical terms, and facilitated transparent access for on-farm users to information from more than one source organisation. It was demonstrated that such a model could maintain the autonomy of participating organisations while simultaneously creating an amalgamated databank for decisio
Mashiloane, Majela Lesley. "Effect of selection at weaning on genetic parameters of weight gain for centralized and on farm test for beef bulls". Thesis, University of Limpopo (Turfloop Campus), 2007. http://hdl.handle.net/10386/788.
Testo completoThe objectives of this study were to evaluate the effect of pre-weaning selection on estimates of genetic parameters for post-weaning average daily gain in Phases C (ADG-C) and D (ADG-D) and to estimate genetic relationships between average daily gain in the two phases. Performance records of the South African Angus cattle breed was used in the analysis. (Co)variance components and genetic parameters for weaning (WWT), AGD-C and ADG-D were estimated by REML procedures fitting three different models (Models 1, 2 and 3) that differed in how they integrated sequential selection in the analysis of post-weaning traits. Model 1 was a univariate model of WWT, ADG-C and ADG-D. Model 2 was a two trait model of WWT and either ADG-C or ADG-D. Model 3 was a three trait model of WWT, ADG-C and ADG-D. Estimates of heritability for ADG-C were 0.39±0.08, 0.42±0.06 and 0.44±0.01 from Model 1, 2 and 3 respectively. Corresponding estimates of heritability for ADG-D were 0.18±0.021, 0.19±0.021 and 0.21±0.02 respectively. An estimate of genetic correlation between ADG-C and ADG-D was 0.58± and it suggested that the two traits may not necessarily be under the same genetic control. Rank correlations for all bulls based on ADG-C estimated breeding values (EBV’s) were 0.92, 0.83 and 0.94 for Model 1 vs. Model 2, Model 1 vs. Model 3 and Model 2 vs. Model 3 respectively. Corresponding ADG-D EBV’s rank correlations were 0.88, 0.84 and 0.93. Rank correlations for top and bottom 1%, 5% and 10% were lower than those for all bulls in both ADG-C and ADG-D. Low rank correlations showed that the difference in magnitude of genetic parameters from different models was enough to alter bull rankings based on EBV’s of ADG-C and ADG-D. Hence it was concluded that inclusion of pre-weaning information in genetic analysis for post-weaning average daily gain is necessary to account for selection at weaning.
the THRIP (Technology and Human Resource for Industry Project) and NRF (National Research Foundation).
Ernst, Robin Tracy. "Virginia feeder cattle basis by season, location, sex, breed, weight and USDA grade differentials". Thesis, Virginia Tech, 1989. http://hdl.handle.net/10919/44632.
Testo completoExplanatory feeder cattle basis models were developed for 16 different Virginia markets by season, futures contract month, weight, lot size, sex, breed and USDA grade differentials. The models are more disaggregated and explain up to 80 percent more of feeder cattle basis variation than any previous research. Since the variables in these explanatory models are all known in advance, these basis models are also predictive. Basis estimates from these models make it possible for a Virginia feeder cattle forward pricing agency to offer forward price and minimum price contracts to small size operators.
Master of Science
Pitt, Colin John. "Lowering Sperm Dose Rates in Frozen Semen for Bovine Artificial Breeding". The University of Waikato, 2007. http://hdl.handle.net/10289/2232.
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