Littérature scientifique sur le sujet « Structural bio-Informatics »
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Articles de revues sur le sujet "Structural bio-Informatics"
Et. al., Ravi Kumar A,. « A Review on Design and Development of Performance Evaluation Model for Bio-Informatics Data Using Hadoop ». Turkish Journal of Computer and Mathematics Education (TURCOMAT) 12, no 2 (10 avril 2021) : 1546–63. http://dx.doi.org/10.17762/turcomat.v12i2.1432.
Texte intégralLakhrissi, Younes, Mohamed Rbaa, Burak Tuzun, Abdelhadi Hichar, El Hassane Anouar, Khadija Ounine, Faisal Almalki, Taibi Ben Hadda, Abdelkader Zarrouk et Brahim Lakhrissi. « Synthesis, structural confirmation, antibacterial properties and bio-informatics computational analyses of new pyrrole based on 8-hydroxyquinoline ». Journal of Molecular Structure 1259 (juillet 2022) : 132683. http://dx.doi.org/10.1016/j.molstruc.2022.132683.
Texte intégralShimizu, Nobutaka, Shinya Saijyo, Hiromasa Ota, Yasuko Nagatani, Ai Kamijyo, Takeharu Mori, Takashi Kosuge et Noriyuki Igarashi. « 3P015 Bio-SAXS in the Platform for Drug Discovery, Informatics, and Structural Life Science (PDIS)(01A. Protein : Structure,Poster) ». Seibutsu Butsuri 53, supplement1-2 (2013) : S214. http://dx.doi.org/10.2142/biophys.53.s214_3.
Texte intégralGeorge Priya Doss, C., C. Sudandiradoss, R. Rajasekaran, Rituraj Purohit, K. Ramanathan et Rao Sethumadhavan. « Identification and structural comparison of deleterious mutations in nsSNPs of ABL1 gene in chronic myeloid leukemia : A bio-informatics study ». Journal of Biomedical Informatics 41, no 4 (août 2008) : 607–12. http://dx.doi.org/10.1016/j.jbi.2007.12.004.
Texte intégralRahman, Monzilur, et Md Masud Parvege. « In silico structural analysis of Hantaan virus glycoprotein G2 and conserved epitope prediction for vaccine development ». Journal of Applied Virology 3, no 3 (19 septembre 2014) : 62. http://dx.doi.org/10.21092/jav.v3i3.38.
Texte intégralKumar, Archana, T. B. Sridharn et Kamini A. Rao. « Role of Seminal Plasma Proteins in Effective Zygote Formation- A Success Road to Pregnancy ». Protein & ; Peptide Letters 26, no 4 (28 mars 2019) : 238–50. http://dx.doi.org/10.2174/0929866526666190208112152.
Texte intégralGheraibia, Youcef, Abdelouahab Moussaoui, Youcef Djenouri, Sohag Kabir, Peng-Yeng Yin et Smaine Mazouzi. « Penguin Search Optimisation Algorithm for Finding Optimal Spaced Seeds ». International Journal of Software Science and Computational Intelligence 7, no 2 (avril 2015) : 85–99. http://dx.doi.org/10.4018/ijssci.2015040105.
Texte intégralJaved, Ambreen, Gulshan Ara Trali, Hassan Burair Abbas et Alia Sadiq. « IN SILICO CHARACTERIZATION OF HUMAN INTERFERON ALPHA/BETA RECEPTOR 2 (ISOFORM A, B AND C) PROTEIN ». PAFMJ 71, no 6 (31 décembre 2021) : 2091–94. http://dx.doi.org/10.51253/pafmj.v71i6.6571.
Texte intégralLakhrissi, Younes, Mohamed Rbaa, Burak Tuzun, Abdelhadi Hichar, El Hassane Anouar, Khadija Ounine, Faisal Almalki, Taibi Ben Hadda, Abdelkader Zarrouk et Brahim Lakhrissi. « Corrigendum to ‘Synthesis, Structural confirmation, Antibacterial Properties and Bio-Informatics Computational Analyses of New Pyrrole Based on 8-Hydroxyquinoline’ Journal of Molecular Structure 1259 (2022) 132683 ». Journal of Molecular Structure 1280 (mai 2023) : 134988. http://dx.doi.org/10.1016/j.molstruc.2023.134988.
Texte intégralKhuntia, Bharat Krushna, Vandna Sharma, Sahar Qazi, Soumi Das, Shruti Sharma, Khalid Raza et Gautam Sharma. « Ayurvedic Medicinal Plants Against COVID-19 : An In Silico Analysis ». Natural Product Communications 16, no 11 (novembre 2021) : 1934578X2110567. http://dx.doi.org/10.1177/1934578x211056753.
Texte intégralThèses sur le sujet "Structural bio-Informatics"
Moniot, Antoine. « Modélisation 3D de complexes ARN-protéine par assemblage combinatoire de fragments structuraux ». Electronic Thesis or Diss., Université de Lorraine, 2022. http://www.theses.fr/2022LORR0339.
Texte intégralThe characterization of RNA-protein complexes at the atomic scale allows us to better understand the biological functions of these complexes, and to define therapeutic targets to regulate the biological phenomena in which they participate. The aim of this thesis is to develop tools to predict the structure of a protein-RNA complex when a 3D structure of the protein is known as well as the secondary structure of the interacting RNA part. We focus on the case where RNA is mainly in single-stranded form (unpaired nucleotides), raising the difficulty of its flexibility.A docking method developed in the CAPSID team is based on the use of structural fragments of single-stranded RNA. The work of this thesis builds on this method to perform docking of RNA secondary structures. We first evaluated the contribution of a loop closure constraint for docking the single-stranded loop of a hairpin structure, and then addressed the docking of the double-stranded elements of these structures, paving the way for the assembly of the entire complex.This fragment-based docking method is dependent on the use of structural fragment libraries. These libraries are composed of prototypes that represent the conformational landscape experimentally observed in protein-bound RNA structures. A large part of the thesis work consisted in the creation and optimization of such fragment libraries.We created the ProtNAff tool that allows to extract subsets of structures from the PDB and to create libraries of nucleic acid fragments, following complex combinations of criteria. It has been designed to exceed our needs, so that it can be adopted by the community for the treatment of various problems.We have developed a new approach for inferring prototypes of a set of conformations. The set of prototypes must satisfy two contradictory constraints: to be representative (in the sense of the metric) and of cardinality as small as possible. The problem thus reduces to that of inferring an epsilon-network of minimal cardinality. We treat it in all its generality by discussing the spaces on which the data are defined. Our method is based on hierarchical agglomerative classification with as linkage the radius of the minimum balls enclosing the points of each subset. Applied to our libraries, this approach reduced their size by a factor of 4, and our docking computation time by the same amount, while improving their reliability.Finally, to overcome the problem posed by the pairwise superimposition of structures, we used a representation of the fragments in internal coordinates, allowing to reduce further the computation time for the creation of libraries
Taveneau, Cyntia. « Modélisation, purification et caractérisation des modules et domaines de la PI4KA humaine ». Thesis, Paris 11, 2015. http://www.theses.fr/2015PA114827/document.
Texte intégralThe eukaryotic lipid kinase phosphatidylinositol 4-kinase III alpha is a ubiquitous enzyme that synthesizes the plasma membrane pool of phosphatidylinositol 4-phosphate. This important phosphoinositide has key roles in different signalization pathways, vesicular traffic and cellular compartment identity. Moreover, PI4KA is an essential factor for hepatitis C virus (HCV) replication. Indeed, PI4KA's interaction with the non-structural HCV protein NS5A at the endoplasmic reticulum membrane leads to formation of a “membranous web” giving to the membrane the signature necessary to the formation of viral replication machineryPI4KA is a large protein (2102 residues, 240 kDa for human PI4KA) with the kinase domain making up the ca 400 C-terminal residues preceded by an Armadillo domain for which no function is known. There is essentially no structural information about the 1500 N-terminal residues and no clue as to the function of most of this region of PI4KA.We use computational methods in order to delineate fragments of human PI4KA amenable to soluble production in Escherichia coli and insect cells. We clone and express these fragments and evaluate the soluble fraction of each construction. Our results further suggest that PI4KA can be described as a two-module protein. The N-terminal module (1100 residues), is composed of two domains which one is an alpha solenoid. Their potential arrangement was defined by small angle X-ray scattering (SAXS).The second module (1000 residues), the C-terminal module, is the core enzyme. Its analysis leads us to identify similarities with the serine/threonine kinases PIKKs, as mTor, homologous to phosphatidylinositol-3-kinases. Three putative domains were delineate at the beginning of this C-terminal module. We name the DI, DII and DIII. Our collaborators have shown their necessity to the kinase activity of PI4KA and the HCV replication. DI domain was characterized and allowed the validation of a new parametrization of the N, N-dimethyl-dodecylamine oxide molecule (LDAO) for simulation of molecular dynamics. Finally, the full-length human PI4KA was expressed in insect cells, purified and a first interaction experiment with membranes have been initiated
Chapitres de livres sur le sujet "Structural bio-Informatics"
Zhou, Linfei, Elisabeth Georgii, Claudia Plant et Christian Böhm. « Covariate-Related Structure Extraction from Paired Data ». Dans Information Technology in Bio- and Medical Informatics, 151–62. Cham : Springer International Publishing, 2016. http://dx.doi.org/10.1007/978-3-319-43949-5_11.
Texte intégralLu, Jing, Alan Hales et David Rew. « Modelling of Cancer Patient Records : A Structured Approach to Data Mining and Visual Analytics ». Dans Information Technology in Bio- and Medical Informatics, 30–51. Cham : Springer International Publishing, 2017. http://dx.doi.org/10.1007/978-3-319-64265-9_4.
Texte intégralRudolfova, Ivana, Jaroslav Zendulka et Matej Lexa. « Clustering of Protein Substructures for Discovery of a Novel Class of Sequence-Structure Fragments ». Dans Information Technology in Bio- and Medical Informatics, ITBAM 2010, 94–101. Berlin, Heidelberg : Springer Berlin Heidelberg, 2010. http://dx.doi.org/10.1007/978-3-642-15020-3_9.
Texte intégralS., Karthigai Selvi. « Structural and Functional Data Processing in Bio-Computing and Deep Learning ». Dans Research Anthology on Bioinformatics, Genomics, and Computational Biology, 1453–66. IGI Global, 2023. http://dx.doi.org/10.4018/979-8-3693-3026-5.ch066.
Texte intégralS., Karthigai Selvi. « Structural and Functional Data Processing in Bio-Computing and Deep Learning ». Dans Structural and Functional Aspects of Biocomputing Systems for Data Processing, 198–215. IGI Global, 2023. http://dx.doi.org/10.4018/978-1-6684-6523-3.ch010.
Texte intégralRaghupathi, Wullianallur, et Sridhar Nerur. « The Intellectual Structure of Health and Medical Informatics ». Dans Advancing Technologies and Intelligence in Healthcare and Clinical Environments Breakthroughs, 1–16. IGI Global, 2012. http://dx.doi.org/10.4018/978-1-4666-1755-1.ch001.
Texte intégralYAMATO, ICHIRO. « FROM STRUCTURE AND FUNCTION OF PROTEINS TOWARDIN SILICOBIOLOGY ». Dans Quantum Bio-Informatics V, 473–85. WORLD SCIENTIFIC, 2013. http://dx.doi.org/10.1142/9789814460026_0040.
Texte intégralHARA, TOSHIHIDE, KEIKO SATO et MASANORI OHYA. « PROTEIN SEQUENCE ALIGNMENT TAKING THE STRUCTURE OF PEPTIDE BOND ». Dans Quantum Bio-Informatics V, 181–85. WORLD SCIENTIFIC, 2013. http://dx.doi.org/10.1142/9789814460026_0015.
Texte intégralORYU, SHINSHO. « LONG-RANGE PROPERTY IN TIME-DEPENDENT INTERACTION WITH THREE-BODY STRUCTURE AND NEW ASPECT ». Dans Quantum Bio-Informatics V, 253–69. WORLD SCIENTIFIC, 2013. http://dx.doi.org/10.1142/9789814460026_0022.
Texte intégralSUZUKI, TOMONORI, et SATORU MIYAZAKI. « THE PREDICTION OF BOTULINUM TOXIN STRUCTURE BASED ON IN SILICO AND IN VITRO ANALYSIS ». Dans Quantum Bio-Informatics IV, 461–67. WORLD SCIENTIFIC, 2011. http://dx.doi.org/10.1142/9789814343763_0036.
Texte intégralActes de conférences sur le sujet "Structural bio-Informatics"
SAHA, ACHINTYA, et TABASSUM HOSSAIN. « Molecular modeling studies for exploring structural requirement of acetylcholinesterase inhibitors ». Dans Fourth International Conference on Advances in Bio-Informatics and Environmental Engineering - ICABEE 2016. Institute of Research Engineers and Doctors, 2016. http://dx.doi.org/10.15224/978-1-63248-100-9-17.
Texte intégralZUNIGA, ALEJANDRO, ARYANE TOFANELLO, CARLOS E, ERICA G, FERNANDO C, ISELI L et JULIANA C. « Self assembled complexes of multibranched gold nanoparticles with porphyrins used in photodynamic therapy Spectral and structural characterization ». Dans Second International Conference on Advances in Bio-Informatics and Environmental Engineering - ICABEE 2015. Institute of Research Engineers and Doctors, 2015. http://dx.doi.org/10.15224/978-1-63248-043-9-102.
Texte intégralMukherjee, Sudipta, Somnath Chakraborty, Deven Diwakar, Apurba Laha, Udayan Ganguly et Swaroop Ganguly. « Investigation of Structural Parameter Variation on Extended Gate TFET for Bio-Sensor Applications ». Dans 2020 7th International Conference on Electrical Engineering, Computer Sciences and Informatics (EECSI). IEEE, 2020. http://dx.doi.org/10.23919/eecsi50503.2020.9251884.
Texte intégralSUZUKI, TOMONORI, et SATORU MIYAZAKI. « IN SILICO ANALYSIS FOR THE STUDY OF BOTULINUM TOXIN STRUCTURE ». Dans From Quantum Information to Bio-Informatics. WORLD SCIENTIFIC, 2010. http://dx.doi.org/10.1142/9789814304061_0039.
Texte intégralCAKAN, BANU, SAIT BASARAN, SEVIM AKYUZ et TANIL AKYUZ. « Protein Structure Predictions of historical silk textiles by ATR FTIR spectroscopy ». Dans Third International Conference on Advances in Bio-Informatics, Bio-Technology and Environmental Engineering- ABBE 2015. Institute of Research Engineers and Doctors, 2015. http://dx.doi.org/10.15224/978-1-63248-060-6-09.
Texte intégralPisal, Amit, et Rabinder Henry. « Thermo-Optic switch : Device structure and design ». Dans 2016 2nd International Conference on Advances in Electrical, Electronics, Information, Communication and Bio-Informatics (AEEICB). IEEE, 2016. http://dx.doi.org/10.1109/aeeicb.2016.7538293.
Texte intégralMishra, Loveneet, Sampath Kumar V et Sangeeta Mangesh. « Design and implementation of low power SRAM structure using nanometer scale ». Dans 2016 2nd International Conference on Advances in Electrical, Electronics, Information, Communication and Bio-Informatics (AEEICB). IEEE, 2016. http://dx.doi.org/10.1109/aeeicb.2016.7538407.
Texte intégralRamesh, M., V. Rajya Lakshmi et P. Mallikarjuna Rao. « Investigation on UWB kite shape textile antenna with Defective Ground Structure ». Dans 2017 Third International Conference on Advances in Electrical, Electronics, Information, Communication and Bio-Informatics (AEEICB). IEEE, 2017. http://dx.doi.org/10.1109/aeeicb.2017.7972374.
Texte intégralArabi, Punal M., Prathibha T.P, Vamsha Deepa N et AbhikRaj Subedi. « Identifying honeycombing structure in HRCT lung images by high intensity pixel pattern ». Dans 2016 2nd International Conference on Advances in Electrical, Electronics, Information, Communication and Bio-Informatics (AEEICB). IEEE, 2016. http://dx.doi.org/10.1109/aeeicb.2016.7538336.
Texte intégralRameswarudu, E. Sarva, et P. V. Sridevi. « Bandwidth enhancement defected ground structure microstrip patch antenna for K and Ka band applications ». Dans 2016 2nd International Conference on Advances in Electrical, Electronics, Information, Communication and Bio-Informatics (AEEICB). IEEE, 2016. http://dx.doi.org/10.1109/aeeicb.2016.7538318.
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