Littérature scientifique sur le sujet « NIR-shoulder indices »

Red-edge (RE) spectral vegetation indices (SVIs)—combining bands on the sharp change region between near infrared (NIR) and visible (VIS) bands—alongside with SVIs solely based on NIR-shoulder bands (wavelengths 750–900 nm) have been shown to perform well in estimating leaf area index (LAI) from proximal and remote sensors. In this work, we used RE and NIR-shoulder SVIs to assess the full potential of bands provided by Sentinel-2 (S-2) and Sentinel-3 (S-3) sensors at both temporal and spatial scales for grassland LAI estimations. Ground temporal and spatial observations of hyperspectral reflectance and LAI were carried out at two grassland sites (Monte Bondone, Italy, and Neustift, Austria). A strong correlation (R2 > 0.8) was observed between grassland LAI and both RE and NIR-shoulder SVIs on a temporal basis, but not on a spatial basis. Using the PROSAIL Radiative Transfer Model (RTM), we demonstrated that grassland structural heterogeneity strongly affects the ability to retrieve LAI, with high uncertainties due to structural and biochemical PTs co-variation. The RENDVI783.740 SVI was the least affected by traits co-variation, and more studies are needed to confirm its potential for heterogeneous grasslands LAI monitoring using S-2, S-3, or Gaofen-5 (GF-5) and PRISMA bands.

Even though research has shown that the spectral parameters of yellow-edge, red-edge and NIR (near-infrared) shoulder wavelength regions are able to estimate green cover and leaf area index (LAI), a large amount of dead materials in grasslands challenges the accuracy of their estimation using hyperspectral remote sensing. However, the exact impact of dead vegetation cover on these spectral parameters remains unclear. Therefore, we evaluated the influences of dead materials on the spectral parameters in the wavelength regions of yellow-edge, red-edge and NIR shoulder by comparing normalized difference vegetation indices (NDVI) including the common red valley at 670 nm and NDVI using the red valley extracted by a new statistical method. This method, based on the concept of segmented linear regression, was developed to extract the spectral parameters and calculate NDVI automatically from the hyper-spectra. To fully understand the impact of dead cover on the spectral parameters (i.e., consider full coverage combinations of green vegetation, dead materials and bare soil), both in situ measured and simulated hyper-spectra were analyzed. The impact of dead cover on LAI estimation by those spectral parameters and NDVI were also evaluated. The results show that: (i) without considering the influence of bare soil, dead materials decreases the slope of red-edge, the slope of NIR shoulder and NDVI, while dead materials increases the slope of yellow-edge; (ii) the spectral characteristics of red valley disappear when dead cover exceeds 67%; (iii) large amount of dead materials also result in a blue shift of the red-edge position; (iv) accurate extraction of the red valley position enhances LAI estimation and reduces the influences of dead materials using hyperspectral NDVI; (v) the accuracy of LAI estimation using the slope of yellow-edge, the slope of red-edge, red-edge position and NDVI significantly drops when dead cover exceeds 72.3–74.5% (variation among indices).

Lichens, in polar and alpine regions, pass through repetitive dehydration and rehydration events over the years. The harsh environmental conditions affect the plasticity of lichen’s functional and structural features for their survival, in a species-specific way, and, thus, their optical and spectral characteristics. For an understanding on how dehydration affects lichens spectral reflectance, we measured visible (VIS) and near infrared (NIR) reflectance spectra of Dermatocarpon polyphyllizum, a foliose lichen species, from James Ross Island (Antarctica), during gradual dehydration from fully wet (relative water content (RWC) = 100%) to dry state (RWC = 0%), under laboratory conditions, and compared several derived reflectance indices (RIs) to RWC. We found a curvilinear relationship between RWC and range of RIs: water index (WI), photochemical reflectance index (PRI), normalized difference vegetation index (NDVI), modified chlorophyll absorption in reflectance indices (MCARI and MCARI1), simple ratio pigment index (SRPI), normalized pigment chlorophyll index (NPCI), and a new NIR shoulder region spectral ratio index (NSRI). The index NDVI was initially increased with maxima around 70% RWC and it steadily declined with further desiccation, whereas PRI in-creased with desiccation and steeply falls when RWC was below 10%. The curvilinear relationship, for RIs versus RWC, was best fitted by polynomial regressions of second or third degree, and it was found that RWC showed very high correlation with WI (R2 = 0.94) that is followed by MCARI (R2 = 0.87), NDVI (R2 = 0.83), and MCARI (R2 = 0.81). The index NSRI, proposed for accessing structural deterioration, was almost invariable during dehydration with the least value of the coefficient of determination (R2 = 0.28). This may mean that lichen, Dermatocarpon polyphyllizum, activates protection mechanisms initially in response to the progression of dehydration; however, severe dehydration causes deactivation of photosynthesis and associated pigments without much affecting its structure.

Grasslands are one of the most important ecosystems on Earth, covering approximately one-third of the Earth’s surface. Grassland biodiversity is important as many services provided by such ecosystems are crucial for the human economy and well-being. Given the importance of grasslands ecosystems, in recent years research has been carried out on the potential to monitor them with novel remote sensing techniques. Improved detectors technology and novel sensors providing fine-scale hyperspectral imagery have been enabling new methods to monitor plant traits (PTs) and biodiversity. The aims of the work were to study different approaches to monitor key grassland PTs such as Leaf Area Index (LAI) and biodiversity-related traits. The thesis consists of 3 parts: 1) Evaluating the performance of remote sensing methods to estimate LAI in grassland ecosystems, 2) Estimating plant biodiversity by using the optical diversity approach in grassland ecosystems, and 3) Investigating the relationship between PTs variability with alpha and beta diversity for the applicability of the optical diversity approach in a subalpine grassland of the Italian Alps To evaluate the performance of remote sensing methods to estimate LAI, temporal and spatial observations of hyperspectral reflectance and LAI were analyzed at a grassland site in Monte Bondone, Italy (IT-MBo). In 2018, ground temporal observations of hyperspectral reflectance and LAI were carried out at a grassland site in Neustift, Austria (AT-NEU). To estimate biodiversity, in 2018 and 2019 a floristics survey was conducted to determine species composition and hyperspectral data were acquired at two grassland sites: IT-MBo and University of Padova’s Experimental Farm, Legnaro, Padua, Italy (IT-PD) respectively. Furthermore, in 2018, biochemistry analysis of the biomass samples collected from the grassland site IT-MBo was carried out to determine the foliar biochemical PTs variability. The results of the thesis demonstrated that the grassland spectral response across different spectral regions (Visible: VIS, red-edge: RE, Near-infrared: NIR) showed to be both site-specific and scale-dependent. In the first part of the thesis, the performance of spectral vegetation indices (SVIs) based on visible, red-edge (RE), and NIR bands alongside SVIs solely based or NIR-shoulder bands (wavelengths 750 - 900 nm) was evaluated. A strong correlation (R2 > 0.8) was observed between grassland LAI and both RE and NIR-shoulder SVIs on a temporal basis, but not on a spatial basis. Using the PROSAIL Radiative Transfer Model (RTM), it was demonstrated that grassland structural heterogeneity strongly affects the ability to retrieve LAI, with high uncertainties due to structural and biochemical PTs co-variation. In the second part, the applicability of the spectral variability hypothesis (SVH) was questioned and highlighted the challenges to use high-resolution hyperspectral images to estimate biodiversity in complex grassland ecosystems. It was reported that the relationship between biodiversity (Shannon, Richness, Simpson, and Evenness) and optical diversity metrics (Coefficient of variation (CV) and Standard deviation (SD)) is not consistent across plant communities. The results of the second part suggested that biodiversity in terms of species richness could be estimated by optical diversity metrics with an R2 = 0.4 at the IT-PD site where the grassland plots were artificially established and are showing a lower structure and complexity from the natural grassland plant communities. On the other hand, in the natural ecosystems at IT-MBo, it was more difficult to estimate biodiversity indices, probably due to structural and biochemical PTs co-variation. The effects of canopy non-vegetative elements (flowers and dead material), shadow pixels, and overexposed pixels on the relationship between optical diversity metrics and biodiversity indices were highlighted. In the third part, we examined the relationship between PTs variability (at both local and community scales, measured by standard deviation and by the Euclidean distances of the biochemical and biophysical PTs respectively) and taxonomic diversity (both α-diversity and β-diversity, measured by Shannon’s index and by Jaccard dissimilarity index of the species, families, and functional groups percent cover respectively) in Monte Bondone, Trentino province, Italy. The results of the study showed that the PTs variability metrics at alpha scale were not correlated with α-diversity. However, the results at the community scale (β-diversity) showed that some of the investigated biochemical and biophysical PTs variations metrics were associated with β-diversity. The SVH approach was also tested to estimate β-diversity and we found that spectral diversity calculated by spectral angular mapper (SAM) showed to be a better proxy of biodiversity in the same ecosystem where the spectral diversity failed to estimate alpha diversity, this leading to the conclusion that the link between functional and species diversity may be an indicator of the applicability of optical sampling methods to estimate biodiversity. The findings of the thesis highlighted that grassland structural heterogeneity strongly affects the ability to retrieve both LAI and biodiversity, with high uncertainties due to structural and biochemical PTs co-variation at complex grassland ecosystems. In this context, the uncertainties of satellite-based products (e.g., LAI) in monitoring grassland canopies characterized by either spatially or temporally varying structure need to be carefully taken into account. The results of the study highlighted that the poor performance of optical diversity proxies in estimating biodiversity in structurally heterogeneous grasslands might be due to the complex relationships between functional diversity and biodiversity, rather than the impossibility to detect functional diversity with spectral proxies.

Grasslands are one of the most important ecosystems on Earth, covering approximately onethird of the Earth’s surface. Grassland biodiversity is important as many services provided by such ecosystems are crucial for the human economy and well-being. Given the importance of grasslands ecosystems, in recent years research has been carried out on the potential to monitor them with novel remote sensing techniques. Improved detectors technology and novel sensors providing finescale hyperspectral imagery have been enabling new methods to monitor plant traits (PTs) and biodiversity. The aims of the work were to study different approaches to monitor key grassland PTs such as Leaf Area Index (LAI) and biodiversity-related traits. The thesis consists of 3 parts: 1) Evaluating the performance of remote sensing methods to estimate LAI in grassland ecosystems, 2) Estimating plant biodiversity by using the optical diversity approach in grassland ecosystems, and 3) Investigating the relationship between PTs variability with alpha and beta diversity for the applicability of the optical diversity approach in a subalpine grassland of the Italian Alps To evaluate the performance of remote sensing methods to estimate LAI, temporal and spatial observations of hyperspectral reflectance and LAI were analyzed at a grassland site in Monte Bondone, Italy (IT-MBo). In 2018, ground temporal observations of hyperspectral reflectance and LAI were carried out at a grassland site in Neustift, Austria (AT-NEU). To estimate biodiversity, in 2018 and 2019 a floristics survey was conducted to determine species composition and hyperspectral data were acquired at two grassland sites: IT-MBo and University of Padova’s Experimental Farm, Legnaro, Padua, Italy (IT-PD) respectively. Furthermore, in 2018, biochemistry analysis of the biomass samples collected from the grassland site IT-MBo was carried out to determine the foliar biochemical PTs variability. The results of the thesis demonstrated that the grassland spectral response across different spectral regions (Visible: VIS, red-edge: RE, Near-infrared: NIR) showed to be both site-specific and scale-dependent. In the first part of the thesis, the performance of spectral vegetation indices (SVIs) based on visible, red-edge (RE), and NIR bands alongside SVIs solely based or NIRshoulder bands (wavelengths 750 - 900 nm) was evaluated. A strong correlation (R2 > 0.8) was observed between grassland LAI and both RE and NIR-shoulder SVIs on a temporal basis, but not on a spatial basis. Using the PROSAIL Radiative Transfer Model (RTM), it was demonstrated that grassland structural heterogeneity strongly affects the ability to retrieve LAI, with high uncertainties due to structural and biochemical PTs co-variation. In the second part, the applicability of the spectral variability hypothesis (SVH) was questioned and highlighted the challenges to use high-resolution hyperspectral images to estimate biodiversity in complex grassland ecosystems. It was reported that the relationship between biodiversity (Shannon, Richness, Simpson, and Evenness) and optical diversity metrics (Coefficient of variation (CV) and Standard deviation (SD)) is not consistent across plant communities. The results of the second part suggested that biodiversity in terms of species richness could be estimated by optical diversity metrics with an R2 = 0.4 at the IT-PD site where the grassland plots were artificially established and are showing a lower structure and complexity from the natural grassland plant communities. On the other hand, in the natural ecosystems at IT-MBo, it was more difficult to estimate biodiversity indices, probably due to structural and biochemical PTs co-variation. The 18 effects of canopy non-vegetative elements (flowers and dead material), shadow pixels, and overexposed pixels on the relationship between optical diversity metrics and biodiversity indices were highlighted. In the third part, we examined the relationship between PTs variability (at both local and community scales, measured by standard deviation and by the Euclidean distances of the biochemical and biophysical PTs respectively) and taxonomic diversity (both α-diversity and βdiversity, measured by Shannon’s index and by Jaccard dissimilarity index of the species, families, and functional groups percent cover respectively) in Monte Bondone, Trentino province, Italy. The results of the study showed that the PTs variability metrics at alpha scale were not correlated with α-diversity. However, the results at the community scale (β-diversity) showed that some of the investigated biochemical and biophysical PTs variations metrics were associated with β-diversity. The SVH approach was also tested to estimate β-diversity and we found that spectral diversity calculated by spectral angular mapper (SAM) showed to be a better proxy of biodiversity in the same ecosystem where the spectral diversity failed to estimate alpha diversity, this leading to the conclusion that the link between functional and species diversity may be an indicator of the applicability of optical sampling methods to estimate biodiversity. The findings of the thesis highlighted that grassland structural heterogeneity strongly affects the ability to retrieve both LAI and biodiversity, with high uncertainties due to structural and biochemical PTs co-variation at complex grassland ecosystems. In this context, the uncertainties of satellite-based products (e.g., LAI) in monitoring grassland canopies characterized by either spatially or temporally varying structure need to be carefully taken into account. The results of the study highlighted that the poor performance of optical diversity proxies in estimating biodiversity in structurally heterogeneous grasslands might be due to the complex relationships between functional diversity and biodiversity, rather than the impossibility to detect functional diversity with spectral proxies