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Articles de revues sur le sujet « Molecular documentation »

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Auteur : Grafiati
Publié le 18 mai 2024

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1

Bates, R., J. Hunter, M. Meredith, M. H. Nichols, W. D. King et K. W. Monroe. « 282 HELMET USE DOCUMENTATION PRE- AND POSTINJURY DOCUMENTATION SHEET. » Journal of Investigative Medicine 54, no 1 (1 janvier 2006) : S306.5—S306. http://dx.doi.org/10.2310/6650.2005.x0008.281.

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Lawlor, E. R., J. A. Mathers, T. Bainbridge, D. E. Horsman, A. Kawai, J. H. Healey, A. G. Huvos, J. A. Bridge, M. Ladanyi et P. H. Sorensen. « Peripheral primitive neuroectodermal tumors in adults : documentation by molecular analysis. » Journal of Clinical Oncology 16, no 3 (mars 1998) : 1150–57. http://dx.doi.org/10.1200/jco.1998.16.3.1150.

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PURPOSE The Ewing tumor (ET) family of peripheral primitive neuroectodermal tumors (pPNETs) are primitive small round-cell tumors (SRCTs) of the bone and soft tissue that occur predominantly in children and adolescents. However, pPNETs only rarely enter the differential diagnosis of bone and soft tissue SRCTs in adults. Recently, gene fusions between the EWS gene and different members of the ETS transcription factor family have been shown to occur in virtually all pPNETs and thus constitute a pathognomonic marker for this tumor subclass. The aim of the present study was to document EWS/ETS fusion gene expression in suspected pPNETs of adults as objective evidence for the existence of this tumor family in older patients. PATIENTS AND METHODS The three contributing molecular diagnostic laboratories retrospectively compiled a cohort of all SRCT cases in which EWS/ETS gene fusions had been shown by molecular analysis. This cohort was surveyed for cases that occurred in patients aged 40 years or older, which were then analyzed for their clinical and pathologic features. RESULTS Nine patients between 40 and 65 years of age were found to have tumors positive for EWS/ETS gene fusions. Standard histopathologic and clinical features of these cases, other than age, were similar to those of childhood pPNETs. Patients were initiated on appropriate therapy after molecular analysis confirmed the diagnosis of pPNET. CONCLUSION Identification of an EWS/ETS gene fusion is useful in providing objective evidence of the diagnosis of pPNET in patients over the age of 40 years. This diagnosis should be considered in adults who present with bone and soft tissue SRCTs and appropriate biopsy specimens should be collected for molecular analysis at the time of diagnosis.
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Diniz, P. P. V. P., S. A. Billeter, D. Otranto, D. De Caprariis, T. Petanides, M. E. Mylonakis, A. F. Koutinas et E. B. Breitschwerdt. « Molecular Documentation of Bartonella Infection in Dogs in Greece and Italy ». Journal of Clinical Microbiology 47, no 5 (4 mars 2009) : 1565–67. http://dx.doi.org/10.1128/jcm.00082-09.

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Bricker, Terry M., Kari B. Green-Church, Patrick A. Limbaugh et Laurie K. Frankel. « Documentation of Negatively Stained Polyacrylamide Gels ». Analytical Biochemistry 278, no 2 (février 2000) : 237–39. http://dx.doi.org/10.1006/abio.1999.4446.

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Powers, James M., et Mahlon D. Johnson. « Mycoplasmal panencephalitis : a neuropathologic documentation ». Acta Neuropathologica 124, no 1 (28 février 2012) : 143–48. http://dx.doi.org/10.1007/s00401-012-0960-1.

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Vogt, Jürgen, Natalja Vogt et Rüdiger Kramer. « Visualization and Substructure Retrieval Tools in the MOGADOC Database (Molecular Gasphase Documentation) ». Journal of Chemical Information and Computer Sciences 43, no 2 (7 février 2003) : 357–61. http://dx.doi.org/10.1021/ci020276l.

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Scott, T. M., G. L. Dace et M. Altschuler. « Low-Cost Agarose Gel Documentation System ». BioTechniques 21, no 1 (juillet 1996) : 68–72. http://dx.doi.org/10.2144/96211bm15.

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Ezidinma, P. A., J. T. Abbott, L. Yancey, C. Mendoza, K. Feldhaus et S. Al Bata. « Documentation of Domestic Violence during Pregnancy ». Journal of Investigative Medicine 52, no 1_suppl_part_1 (janvier 2001) : 91. http://dx.doi.org/10.1177/108155890105201s73.

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Ezidinma, P. A., J. T. Abbott, L. Yancey, C. Mendoza, K. Feldhaus et S. Al Bata. « Documentation of Domestic Violence during Pregnancy ». Journal of Investigative Medicine 52, no 1_suppl_part_1 (janvier 2001) : 102. http://dx.doi.org/10.1177/108155890105201s132.

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Asad, Nadeem, Scott Cregg, Sudeep Shakya, Sutton Stegman et Lisa Timmons. « Sustainable and Cost-Effective Gel Documentation ». Methods and Protocols 6, no 2 (21 février 2023) : 21. http://dx.doi.org/10.3390/mps6020021.

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A common laboratory method involves gel electrophoresis followed by photographic documentation of the results, a procedure which is performed worldwide by students and experienced scientists alike. Proprietary Gel Documentation Systems are convenient and useful for documentation of electrophoresis results, but the systems can be prohibitively expensive to purchase and repair, they contain features that are not necessary for everyday documentation, and some users may not find the systems intuitive to operate. We describe our gel documentation setup that meets the everyday needs for documentation in our lab. The setup is inexpensive, modular, user friendly, and increases sustainability through extending the working life of obsolete cell phones, iPads, or other electronic devices containing a camera. More importantly, the setup completely shields users from potentially damaging ultraviolet radiation.
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Mockler, Jennifer A., Bernadette McQuigg, Lucina Todl, Alyssa Frank, Elisabeth G. Brown, Yolanda M. Melendez et Linda Roberts. « Streamlining Documentation Systems and Providing Timely Feedback to Improve Good Documentation Practices in an Apheresis Unit ». Transplantation and Cellular Therapy 28, no 3 (mars 2022) : S449—S450. http://dx.doi.org/10.1016/s2666-6367(22)00739-4.

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Mangar, Devanand. « Documentation of high-molecular-weight dextran(Hyskon) solution entering the serum during hysteroscopy ». American Journal of Obstetrics and Gynecology 166, no 2 (février 1992) : 771. http://dx.doi.org/10.1016/0002-9378(92)91724-o.

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Renner, Christopher, Niklas Reimer, Jan Christoph, Hauke Busch, Patrick Metzger, Melanie Boerries, Arsenij Ustjanzew, Dominik Boehm et Philipp Unberath. « Extending cBioPortal for Therapy Recommendation Documentation in Molecular Tumor Boards : Development and Usability Study ». JMIR Medical Informatics 11 (11 décembre 2023) : e50017. http://dx.doi.org/10.2196/50017.

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Background In molecular tumor boards (MTBs), patients with rare or advanced cancers are discussed by a multidisciplinary team of health care professionals. Software support for MTBs is lacking; in particular, tools for preparing and documenting MTB therapy recommendations need to be developed. Objective We aimed to implement an extension to cBioPortal to provide a tool for the documentation of therapy recommendations from MTB sessions in a secure and standardized manner. The developed extension should be embedded in the patient view of cBioPortal to enable easy documentation during MTB sessions. The resulting architecture for storing therapy recommendations should be integrable into various hospital information systems. Methods On the basis of a requirements analysis and technology analysis for authentication techniques, a prototype was developed and iteratively refined through a user-centered development process. In conclusion, the tool was evaluated via a usability evaluation, including interviews, structured questionnaires, and the System Usability Scale. Results The patient view of cBioPortal was extended with a new tab that enables users to document MTB sessions and therapy recommendations. The role-based access control was expanded to allow for a finer distinction among the rights to view, edit, and delete data. The usability evaluation showed overall good usability and a System Usability Scale score of 83.57. Conclusions This study demonstrates how cBioPortal can be extended to not only visualize MTB patient data but also be used as a documentation platform for therapy recommendations.
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Ezidinma, P. A., J. T. Abbott, L. Yancey, C. Mendoza, K. Feldhaus et S. Al Bata. « 132 DOCUMENTATION OF DOMESTIC VIOLENCE DURING PREGNANCY. » Journal of Investigative Medicine 52, Suppl 1 (1 janvier 2004) : S102.1—S102. http://dx.doi.org/10.1136/jim-52-suppl1-132.

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Torres-Morán, Martha Isabel, Eduardo Rodríguez-Guzmán, Ana Paulina Velasco-Ramírez, Martha Escoto-Delgadillo, Mónica Elizabeth Riojas-López, Noé Durán-Puga et Rogelio Lépiz Ildefonso. « Estudio preliminar de identificación a nivel molecular, de ecotipos de chile piquín ». e-CUCBA 9, no 18 (26 avril 2022) : 192–97. http://dx.doi.org/10.32870/ecucba.vi18.254.

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The piquín chili is a plant genetic resource with great potential for culinary nutrition and vitamin supply for consumer countriessuch as Mexico. Its study at the molecular level represents a possibility of differentiating the existing ecotypes in each region whereit is produced or where it is consumed. Due to the great morphological variability that it presents, the molecular characterization ofchili as a plant genetic resource represents obtaining the characteristics from the genetic point of view. This is necessary for theidentification of promising genotypes for genetic improvement in addition to documentation of the gene pool. In the present work, apreliminary study was carried out to identify piquín chili ecotypes from nine states of the republic, using the molecular markerISSR (Inter Simple Sequence Repeats). The results obtained provide information on the ability of molecular markers to detectdifferences in ecotypes, which correspond to the different collection regions.
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Bjelkhagen, Hans I. « Denisyuk Color Holography for Display, Documentation and Measurement ». Journal of Holography and Speckle 5, no 1 (1 avril 2009) : 33–41. http://dx.doi.org/10.1166/jhs.2009.006.

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Wolf, J. Ryan, Y. Xie, I. Kim, A. P. Pentland, K. Frank et B. T. Pentland. « 619 Team documentation influences clinic complexity and patient satisfaction ». Journal of Investigative Dermatology 139, no 5 (mai 2019) : S106. http://dx.doi.org/10.1016/j.jid.2019.03.695.

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Luchowski, Leszek, Dariusz Pojda, Agnieszka Anna Tomaka, Krzysztof Skabek et Przemysław Kowalski. « Multimodal Imagery in Forensic Incident Scene Documentation ». Sensors 21, no 4 (17 février 2021) : 1407. http://dx.doi.org/10.3390/s21041407.

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Various imaging modalities are evaluated for use in forensic incident (crime or accident) scene documentation. Particular attention is paid to the precision vs. cost tradeoff, accomplished by judiciously combining various 3D scans and photogrammetric reconstructions from 2D photographs. Assumptions are proposed for two complementary software systems: an event scene pilot assisting the on-site staff in their work securing evidence and facilitating their communication with stationary support staff, and an evidence keeper, managing the voluminous and varied database of accumulated imagery, textual notes and physical evidence inventory.
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Buckel, Whitney R., Edina Avdic, Karen C. Carroll, Vidhya Gunaseelan, Eric Hadhazy et Sara E. Cosgrove. « Gut Check : Clostridium difficile Testing and Treatment in the Molecular Testing Era ». Infection Control & ; Hospital Epidemiology 36, no 2 (18 décembre 2014) : 217–21. http://dx.doi.org/10.1017/ice.2014.19.

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We evaluated the impact of nursing education and stewardship interventions on Clostridium difficile testing and treatment appropriateness. Diarrhea documentation increased for those with positive tests (45% to 70%); pretreatment laxative use decreased (50% to 19%). Appropriate treatment increased for severe infection (57% to 93%), but all asymptomatically colonized patients were treated.Infect Control Hosp Epidemiol 2014;00(0): 1–5
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Hope, Carol, Nicollete Estrada, Charlene Weir, Chia-Chen Teng, Kavitha Damal et Brian C. Sauer. « Documentation of delirium in the VA electronic health record ». BMC Research Notes 7, no 1 (2014) : 208. http://dx.doi.org/10.1186/1756-0500-7-208.

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Bhuiyan, Anwar A., et James R. Kincaid. « Zeolite-Based Organized Molecular Assemblies. Photophysical Characterization and Documentation of Donor Oxidation upon Photosensitized Charge Separation ». Inorganic Chemistry 40, no 17 (août 2001) : 4464–71. http://dx.doi.org/10.1021/ic010191m.

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Doelz, R. « Optimal production of biological documentation : the JAM format ». Bioinformatics 11, no 2 (1995) : 224–26. http://dx.doi.org/10.1093/bioinformatics/11.2.224.

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Wolf, J. Ryan, Y. Xie, I. Kim, A. P. Pentland et B. T. Pentland. « 472 Visit complexity reflects billed level of service and documentation burden ». Journal of Investigative Dermatology 140, no 7 (juillet 2020) : S63. http://dx.doi.org/10.1016/j.jid.2020.03.480.

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Al-Graibawi, Mawlood A., Afaf A. Yousif, Hasanain A. Gharban et Jakob Zinsstag. « First serodetection and molecular phylogenetic documentation of Coxiella burnetii isolates from female camels in Wasit governorate, Iraq ». Iraqi Journal of Veterinary Sciences 35, Supplement I-III (8 décembre 2021) : 47–52. http://dx.doi.org/10.33899/ijvs.2021.130888.1890.

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Crowdis, Jett, Meng Xiao He, Brendan Reardon et Eliezer M. Van Allen. « CoMut : visualizing integrated molecular information with comutation plots ». Bioinformatics 36, no 15 (5 juin 2020) : 4348–49. http://dx.doi.org/10.1093/bioinformatics/btaa554.

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Abstract Motivation Large-scale sequencing studies have created a need to succinctly visualize genomic characteristics of patient cohorts linked to widely variable phenotypic information. This is often done by visualizing the co-occurrence of variants with comutation plots. Current tools lack the ability to create highly customizable and publication quality comutation plots from arbitrary user data. Results We developed CoMut, a stand-alone, object-oriented Python package that creates comutation plots from arbitrary input data, including categorical data, continuous data, bar graphs, side bar graphs and data that describes relationships between samples. Availability and implementation The CoMut package is open source and is available at https://github.com/vanallenlab/comut under the MIT License, along with documentation and examples. A no installation, easy-to-use implementation is available on Google Colab (see GitHub).
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Berger, Sarah, Paul T. Madeira, Jason Ferrell, Lyn Gettys, Sergio Morichetti, Juan J. Cantero et Cesar Nuñez. « Palmer Amaranth (Amaranthus palmeri) Identification and Documentation of ALS-Resistance in Argentina ». Weed Science 64, no 2 (juin 2016) : 312–20. http://dx.doi.org/10.1614/ws-d-15-00125.1.

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Palmer amaranth has greatly disrupted agricultural practices in the United States with its rapid growth and rapid evolution of herbicide resistance. This weed species is now suspected in Argentina. To document whether the suspected plant populations are indeed Palmer amaranth, molecular comparisons to known standards were conducted. Additionally, these same plant populations were screened for possible herbicide resistance to several acetolactate synthase (ALS)-inhibiting herbicides. Sequencing data confirmed that suspected populations (A2, A3, A4) were indeed Palmer amaranth. Another population (A1) was tested to determine whether hybridization had occurred between Palmer amaranth and mucronate amaranth the native amaranth species of the region. Tests confirmed that no hybridization had occurred and that A1 was simply a unique phenotype of mucronate amaranth. Each population was screened for resistance to imazapic, nicosulfuron, and diclosulam. All Palmer amaranth populations from Argentina were shown to be resistant to at least one ALS-inhibiting herbicide. The populations were then subjected to further testing to identify the mutation responsible for the observed ALS resistance. All mucronate amaranth populations exhibited a mutation previously documented to confer ALS resistance (S653N). No known resistance-conferring mutations were found in Palmer amaranth.
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Levy, Benjamin Philip, Breanne Y. Farris, Rebecca R. Crawford, Jeffrey D. Carter et Tamar Sapir. « Patterns of care in ALK+ or ROS1+ non-small cell lung cancer (NSCLC) in community systems. » Journal of Clinical Oncology 38, no 29_suppl (10 octobre 2020) : 232. http://dx.doi.org/10.1200/jco.2020.38.29_suppl.232.

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232 Background: For patients who have ALK or ROS1+ NSCLC, targeted therapies have greatly improved treatment options, though challenges personalizing care have hindered effective integration. In a quality improvement (QI) program conducted in 2 community oncology systems, practices involving the use of targeted therapies for NSCLC were assessed. Methods: Between 01-04/2020, retrospective EMR audits of 100 patients with ALK or ROS1+ NSCLC were analyzed for demographics, molecular testing, disease characteristics, treatment history, and shared decision-making (SDM). Surveys were administered to evaluate healthcare professionals’ (HCP; N = 47) challenges and barriers. HCP teams participated in audit-feedback sessions and developed action plans for resolving identified gaps. Results: 64% of HCPs indicated high confidence in utilizing molecular tests to inform treatment and properly sequencing targeted therapies; however, the EMR audit demonstrated challenges efficiently integrating guideline-aligned testing into practice. The mean time from diagnosis to molecular testing results was 22 days and documentation of testing for genetic aberrations other than ALK/ROS1 during work-up were low (Table). Delays in receiving molecular testing results may have presented challenges aligning treatment practices to guidelines as some patients were not receiving frontline targeted therapies (31% ALK+, 24% ROS1+). Additionally, EMR audits suggested sub-optimal use of distress screening (37%), tobacco counseling (38%), quality of life screening (60%), and engagement/documentation of various aspects of SDM (Table) for patient-centered care. Importantly, given the role internalized stigma can play in lung cancer, only 59% of those surveyed indicated that they routinely use tools to identify patients affected by stigma. During audit-feedback sessions, teams identified increased documentation, improved molecular testing/collaboration with pathology team, and provision of patient-centered care, including reduction of smoking-associated stigma as action items. Conclusions: These findings reveal important performance gaps in providing targeted and patient-centered treatment for NSCLC in community settings. These findings may be relevant for future QI programs. [Table: see text]
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Stamatas, Georgios N., et Nikiforos Kollias. « In vivo documentation of cutaneous inflammation using spectral imaging ». Journal of Biomedical Optics 12, no 5 (2007) : 051603. http://dx.doi.org/10.1117/1.2798704.

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Longabaugh, William J. R., Eric H. Davidson et Hamid Bolouri. « Visualization, documentation, analysis, and communication of large-scale gene regulatory networks ». Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1789, no 4 (avril 2009) : 363–74. http://dx.doi.org/10.1016/j.bbagrm.2008.07.014.

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LATHA, K. P. DEEPNA, K. N. ANIL RAJ et PATINJAREVEETTIL MANIMOHAN. « Two new species of Rhodocollybia from tropical India ». Phytotaxa 340, no 2 (23 février 2018) : 157. http://dx.doi.org/10.11646/phytotaxa.340.2.4.

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Two new species of Rhodocollybia, R. ciliatomarginata and R. brevipes, are described from Kerala State, India, based on morphological and molecular data. Comprehensive descriptions, photographs, and comparisons with phenetically similar and phylogenetically related species are provided. Molecular phylogenetic analysis based on nrITS-rDNA sequences coupled with morphology confirmed both the novelty of these species and their placement in the genus Rhodocollybia. The present study forms the first documentation of the genus Rhodocollybia from south Asia.
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Furst, Daniel E., Roy Fleischman, Joachim Kalden, Arthur Kavanaugh, Joachim Sieper, Philip Mease, Josef Smolen et Ferrie Breedveld. « Documentation of off-label use of biologics in Rheumatoid Arthritis ». Annals of the Rheumatic Diseases 72, suppl 2 (25 mars 2013) : ii35—ii51. http://dx.doi.org/10.1136/annrheumdis-2013-consensusapp.

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Mairittha, Tittaya, Nattaya Mairittha et Sozo Inoue. « Evaluating a Spoken Dialogue System for Recording Systems of Nursing Care ». Sensors 19, no 17 (29 août 2019) : 3736. http://dx.doi.org/10.3390/s19173736.

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Integrating speech recondition technology into an electronic health record (EHR) has been studied in recent years. However, the full adoption of the system still faces challenges such as handling speech errors, transforming raw data into an understandable format and controlling the transition from one field to the next field with speech commands. To reduce errors, cost, and documentation time, we propose a dialogue system care record (DSCR) based on a smartphone for nursing documentation. We describe the effects of DSCR on (1) documentation speed, (2) document accuracy and (3) user satisfaction. We tested the application with 12 participants to examine the usability and feasibility of DSCR. The evaluation shows that DSCR can collect data efficiently by achieving 96% of documentation accuracy. Average documentation speed was increased by 15% (P = 0.012) compared to traditional electronic forms (e-forms). The participants’ average satisfaction rating was 4.8 using DSCR compared to 3.6 using e-forms on a scale of 1–5 (P = 0.032).
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Argoff, Charles E., Christine R. Kaneski, E. Joan Blanchette-Mackie, Marcella Comly, Nancy K. Dwyer, Anthony Brown, Roscoe O. Brady et Peter G. Pentchev. « Type C Niemann-Pick disease : Documentation of abnormal LDL processing in lymphocytes ». Biochemical and Biophysical Research Communications 171, no 1 (août 1990) : 38–45. http://dx.doi.org/10.1016/0006-291x(90)91353-t.

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Symes, Philip H., Michael E. Williams, Herbert C. Flessa, Ashok K. Srivastava et Steven H. Swerdlow. « Acute Promyelocytic Leukemia with the Pseudo-Chediak-Higashi Anomaly and Molecular Documentation of t(15 ; 17) Chromosomal Translocation ». American Journal of Clinical Pathology 99, no 5 (1 mai 1993) : 622–27. http://dx.doi.org/10.1093/ajcp/99.5.622.

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Phelan, Krystin, April M. H. Blakeslee, Maureen Krause et Jason D. Williams. « First documentation and molecular confirmation of three trematode species (Platyhelminthes : Trematoda) infecting the polychaete Marenzelleria viridis (Annelida : Spionidae) ». Parasitology Research 115, no 1 (18 septembre 2015) : 183–94. http://dx.doi.org/10.1007/s00436-015-4734-2.

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Escobar, Daisy E., Mohd Khushman, Jennifer Young Pierce, Cathy Tinnea, Austin Cadden, Debra Wujcik, Susie Owenby et Sachin Gopalkrishn Pai. « A practice transformation model to improve lung cancer care. » Journal of Clinical Oncology 37, no 27_suppl (20 septembre 2019) : 92. http://dx.doi.org/10.1200/jco.2019.37.27_suppl.92.

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92 Background: Lung cancer has the highest cause of cancer death, treatment of which is both complicated and expensive. Emerging actionable biomarkers and treatments provide both opportunity and treatment challenges. Adherence to evidence-based treatment and advanced care discussions add value to care. Oncology practices need to document the above to participate in value-based care reimbursement models. A Practice Transformation (PT) model was implemented to address quality and cost issues. Methods: After IRB approval, baseline data on lung cancer patients diagnosed during a 6-month period (Jul-Dec 2017) were collected through chart abstraction and treatment planning surveys. Rates of molecular testing ordered, results available at time of treatment decision-making, guideline concordant treatment decisions, and documentation of advanced care discussions were presented to the PT team. After education on recent clinical trial results and NCCN treatment guidelines, the PT team determined strategies for change. The PT team met after two 3-month periods of PT for education updates and progress reports. Data was compared on newly diagnosed patients during a 6-month period (Jul-Dec 2018), one year after the baseline period. Results: A total of forty-two patients were diagnosed in two 6-month periods, baseline and study period. Average age was 65 years, 57% male, 71% Caucasian, 95% ever smokers, 71% adenocarcinoma histology. Rate of ordering any molecular testing was (16/19) 84% in the baseline period vs (20/23) 86% in the study period. However, extended molecular testing increased from 16% (3/19) to 60% (12/20), p = .05 Fishers exact test. At treatment initiation, evidence-based treatment selections went from 47% to 52%. Documentation of advanced care discussions, 42% (8/19) to 56% (13/23), did not change significantly. Conclusions: A PT model that included education, and two cycles of implementation and feedback, resulted in increased molecular testing to inform evidence-based treatment selections. Increased awareness of the lack of documentation of advanced care discussions provides opportunity for continued improvement to effect quality care.
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Kostka, Dennis, et Rainer Spang. « Microarray Based Diagnosis Profits from Better Documentation of Gene Expression Signatures ». PLoS Computational Biology 4, no 2 (15 février 2008) : e22. http://dx.doi.org/10.1371/journal.pcbi.0040022.

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Kostka, Dennis, et Rainer Spang. « Microarray Based Diagnosis Profits from Better Documentation of Gene Expression Signatures ». PLoS Computational Biology preprint, no 2008 (2005) : e22. http://dx.doi.org/10.1371/journal.pcbi.0040022.eor.

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Lo, C., J. Martindale, M. Hadjivassiliou, P. Martin, A. Dalton et O. Bandmann. « The documentation of consent and disclosure of neurogenetic testing outside clinical genetics ». neurogenetics 15, no 1 (11 février 2014) : 19–21. http://dx.doi.org/10.1007/s10048-014-0391-3.

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Doidge, Peter S. « Improved documentation of spectral lines for inductively coupled plasma emission spectrometry ». Spectrochimica Acta Part B : Atomic Spectroscopy 143 (mai 2018) : 78–90. http://dx.doi.org/10.1016/j.sab.2018.02.016.

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Wieczór, Miłosz, Adam Hospital, Genis Bayarri, Jacek Czub et Modesto Orozco. « Molywood : streamlining the design and rendering of molecular movies ». Bioinformatics 36, no 17 (23 juin 2020) : 4660–61. http://dx.doi.org/10.1093/bioinformatics/btaa584.

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Abstract Motivation High-quality dynamic visuals are needed at all levels of science communication, from the conference hall to the classroom. As scientific journals embrace new article formats, many key concepts—particularly, in structural biology—are also more easily conveyed as videos than still frames. Notwithstanding, the design and rendering of a complex molecular movie remain an arduous task. Here, we introduce Molywood, a robust and intuitive tool that builds on the capabilities of Visual Molecular Dynamics (VMD) to automate all stages of movie rendering. Results Molywood is a Python-based script that uses an integrated workflow to give maximal flexibility in movie design. It implements the basic concepts of actions, layers, grids and concurrency and requires no programming experience to run. Availability and implementation The script is freely available on GitLab (gitlab.com/KomBioMol/molywood) and PyPI (through pip), and features an extended documentation, tutorial and gallery hosted on mmb.irbbarcelona.org/molywood.
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Kanzaki, Natsumi, Robin M. Giblin-Davis et Barbara J. Center. « Recharacterisation and photo-documentation of five North American Bursaphelenchus species from C.L. Massey’s type material ». Nematology 18, no 3 (2016) : 311–36. http://dx.doi.org/10.1163/15685411-00002961.

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The type specimens of fiveBursaphelenchusspecies described by Massey,i.e.,B. bestiolus,B. corneolus,B. elytrus,B. newmexicanusandB. wilfordi, were re-examined and photo-documented to update their descriptions in light of a contemporary understanding of the genus. The presence of a lateral field, basal swelling of stylet, P1 ventral single papilla of males and a pair of three-celled structures in females, which were not described or mentioned in the original descriptions, were observed, although the number of lateral incisures were not clarified because of sample condition. Within these five species, the intrageneric groupings ofB. bestiolusandB. wilfordihad been unclear. In the present study, because of newly observed morphological characters,B. bestiolusis considered to belong to thehofmanni-group, and is close toB. talonusandB. rufipennis. These three species form a species complex and are distinguished from each other only by female tail morphology. The species status ofB. wilfordiis still unclear, although, based on spicule morphology and structure and arrangement of genital papillae, we consider it to belong to thehofmanni-group, close toB. parvispicularis,B. paraparvispicularisandB. osumiana. However, female characters ofB. wilfordiare also similar to members of thecocophilus-group andParasitaphelenchus. Re-isolation and molecular identification are necessary to confirm the status of these species. By contrast, the affiliations ofB. corneoluswith thehofmanni-group andB. elytrusandB. newmexicanuswith theeggersi-group were confirmed. Based upon its morphological traits,B. corneolusis close toB. gerberaeandB. paracorneolus, and is distinguished from these species by its spicule morphology, female tail morphology and female post-uterine sac length. However, male specimens ofB. corneoluswere not available for the present study and confirmation is necessary.Bursaphelenchus elytrusis similar toB. tusciaeand is distinguished from it by its spicule (condylus) morphology and excretory pore position.Bursaphelenchus newmexicanusis close toB. glochisand is distinguished from it mostly by morphometrics and spicule (condylus) morphology. However, morphometrics usually vary among individuals and populations of a species, necessitating morphometric and molecular comparisons of more isolates (strains) in order to clarify specific status.
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TEA, YI-KAI, BENJAMIN W. FRABLE et CARA VAN DER WAL. « Redescription and phylogenetic placement of Cirrhilabrus sanguineus Cornic (Teleostei : Labridae), with first documentation of the female form ». Zootaxa 4526, no 3 (30 novembre 2018) : 358. http://dx.doi.org/10.11646/zootaxa.4526.3.5.

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The labrid fish Cirrhilabrus sanguineus Cornic is redescribed on the basis of the neotype, two male specimens, and an additional female specimen recently collected from the northern coast of Mauritius. We provide new live and nuptial colouration descriptions, as well as the first documented female specimen for the species. we also include a molecular phylogenetic analysis of related species, with brief comments on phylogenetic interpretation of putative relationships amongst members of the genus Cirrhilabrus.
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ILY AZZEDINE ALAIA MH SUBARI, JAYA SEELAN SATHIYA SEELAN et TAN YEE SHIN. « New Record of Edible Chicken of the Wood Mushroom, Laetiporus versisporus (Lloyd) Imazeki (Fomitopsidaceae, Polyporales) from Sabah (Northern Borneo), Malaysia ». Borneo Journal of Resource Science and Technology 13, no 2 (25 décembre 2023) : 92–102. http://dx.doi.org/10.33736/bjrst.5822.2023.

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The genus Laetiporus has been previously reported from Mesilau in Sabah, Northern Borneo in 1964. To date, no further documentation of the Laetiporus genus has been reported in Sabah, Malaysia. This study provides an overview of recent literature on taxonomic updates, distribution and sequence data of Laetiporus in Malaysia. During the period March – June 2020, two Laetiporus specimens were collected in Maliau Basin Conservation Area and Sipitang. These two specimens were identified as L. versisporus based on morphological characteristics and molecular methods. Interestingly, no sequence data for this particular species have been documented for Malaysian Borneo. This study represents the initial documentation of L. versisporus in Sabah (Northern Borneo) that have potential applications in medicine and food industry and provide insights into its phylogenetic relationship within the genus Laetiporus.
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Nor Atikah, A. R., M. Halim, S. A. Syarifah Zulaikha et S. Yaakop. « Molecular identification and first documentation of seven species of Carpophilus Stephens (Nitidulidae : Carpophilinae) in oil palm ecosystem, Peninsular Malaysia ». Journal of Asia-Pacific Entomology 22, no 2 (juin 2019) : 619–24. http://dx.doi.org/10.1016/j.aspen.2019.04.010.

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Hull, Leland E., Catherine Chanfreau-Coffinier, Sony Tuteja, Dan Berlowitz, Lisa S. Lehmann, David W. Oslin, Jeffrey M. Pyne, Scott L. DuVall et Julie A. Lynch. « Early adoption of pharmacogenetic testing for veterans prescribed psychotropic medications ». Pharmacogenomics 20, no 11 (juillet 2019) : 781–89. http://dx.doi.org/10.2217/pgs-2019-0065.

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Aim: Describe the characteristics of providers ordering, patients receiving, and clinical impact of a psychotropic pharmacogenetic test on veteran care. Patients & methods: Observational cohort study linking veterans' laboratory results to electronic health record data. Changes in psychotropic medication prescribing were measured as a function of test results. Results: A total of 38 providers tested 181 veterans between 10/6/2014 and 2/1/2018. Prescriptions for medications with severe gene–drug interactions decreased; however, 11 such medications were used after testing. For 43 patients, documentation of the results was missing. Conclusion: Most prescribing decisions were congruent with test results, but in a nontrivial number of cases, prescribers appeared not to act on the results. Poor result documentation impeded the potential of results to inform clinical care.
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Takacs, Sara M., et Amber R. Comer. « Documentation of advance care planning forms in patients with amyotrophic lateral sclerosis ». Muscle & ; Nerve 65, no 2 (30 novembre 2021) : 187–92. http://dx.doi.org/10.1002/mus.27462.

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Mandal, K. « "Near misses" in a cataract theatre : how do we improve understanding and documentation ? » British Journal of Ophthalmology 89, no 12 (1 décembre 2005) : 1565–68. http://dx.doi.org/10.1136/bjo.2005.072850.

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Yuen, Darana, et Yvonne M. Buys. « Disc photography and heidelberg retinal tomography documentation of reversal of cupping following trabeculectomy ». Graefe's Archive for Clinical and Experimental Ophthalmology 248, no 11 (8 juin 2010) : 1671–73. http://dx.doi.org/10.1007/s00417-010-1422-x.

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Masison, Joseph, Paul J. Michalski, Leslie M. Loew et Adam D. Schuyler. « mol2sphere : spherical decomposition of multi-domain molecules for visualization and coarse grained spatial modeling ». Bioinformatics 34, no 22 (19 juin 2018) : 3948–50. http://dx.doi.org/10.1093/bioinformatics/bty487.

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Abstract Motivation Proteins, especially those involved in signaling pathways are composed of functional modules connected by linker domains with varying degrees of flexibility. To understand the structure–function relationships in these macromolecules, it is helpful to visualize the geometric arrangement of domains. Furthermore, accurate spatial representation of domain structure is necessary for coarse-grain models of the multi-molecular interactions that comprise signaling pathways. Results We introduce a new tool, mol2sphere, that transforms the atomistic structure of a macromolecule into a series of linked spheres corresponding to domains. It does this with a k-means clustering algorithm. It may be used for visualization or for coarse grain modeling and simulation. Availability and implementation PyMOL plugin, source, and documentation https://nmrbox.org/registry/mol2sphere. SpringSaLaD executables and documentation: http://vcell.org/ssalad, SpringSaLaD v.2 source: https://github.com/jmasison/SpringSaLaD.
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