Littérature scientifique sur le sujet « Bioinformatics, metalloproteins, metal-binding proteins »
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Articles de revues sur le sujet "Bioinformatics, metalloproteins, metal-binding proteins"
Zhang, Yan, et Junge Zheng. « Bioinformatics of Metalloproteins and Metalloproteomes ». Molecules 25, no 15 (24 juillet 2020) : 3366. http://dx.doi.org/10.3390/molecules25153366.
Texte intégralAndreini, Claudia, et Antonio Rosato. « Structural Bioinformatics and Deep Learning of Metalloproteins : Recent Advances and Applications ». International Journal of Molecular Sciences 23, no 14 (12 juillet 2022) : 7684. http://dx.doi.org/10.3390/ijms23147684.
Texte intégralWang, Kai, Nan Lyu, Hongjuan Diao, Shujuan Jin, Tao Zeng, Yaoqi Zhou et Ruibo Wu. « GM-DockZn : a geometry matching-based docking algorithm for zinc proteins ». Bioinformatics 36, no 13 (5 mai 2020) : 4004–11. http://dx.doi.org/10.1093/bioinformatics/btaa292.
Texte intégralMonette, Anne, et Andrew J. Mouland. « Zinc and Copper Ions Differentially Regulate Prion-Like Phase Separation Dynamics of Pan-Virus Nucleocapsid Biomolecular Condensates ». Viruses 12, no 10 (18 octobre 2020) : 1179. http://dx.doi.org/10.3390/v12101179.
Texte intégralAramini, James M., et Hans J. Vogel. « Quadrupolar metal ion NMR studies of metalloproteins ». Biochemistry and Cell Biology 76, no 2-3 (1 mai 1998) : 210–22. http://dx.doi.org/10.1139/o98-037.
Texte intégralDudev, Todor, Luis Manuel Frutos et Obis Castaño. « How mechanical forces can modulate the metal affinity and selectivity of metal binding sites in proteins ». Metallomics 12, no 3 (2020) : 363–70. http://dx.doi.org/10.1039/c9mt00283a.
Texte intégralArnesano, Fabio, Lucia Banci et Mario Piccioli. « NMR structures of paramagnetic metalloproteins ». Quarterly Reviews of Biophysics 38, no 2 (mai 2005) : 167–219. http://dx.doi.org/10.1017/s0033583506004161.
Texte intégralYu, Yue, Ruobing Wang et Ruijie D. Teo. « Machine Learning Approaches for Metalloproteins ». Molecules 27, no 4 (14 février 2022) : 1277. http://dx.doi.org/10.3390/molecules27041277.
Texte intégralCarugo, Oliviero. « Metalloproteins : metal binding predicted on the basis of the amino acid sequence ». Journal of Applied Crystallography 41, no 1 (16 janvier 2008) : 104–9. http://dx.doi.org/10.1107/s0021889807065235.
Texte intégralÖz, Gülin, Dean L. Pountney et Ian M. Armitage. « NMR spectroscopic studies of I = 1/2 metal ions in biological systems ». Biochemistry and Cell Biology 76, no 2-3 (1 mai 1998) : 223–34. http://dx.doi.org/10.1139/o98-059.
Texte intégralThèses sur le sujet "Bioinformatics, metalloproteins, metal-binding proteins"
Roy, Poorna Roy. « Analyzing and classifying bimolecular interactions:I. Effects of metal binding on an iron-sulfur cluster scaffold proteinII. Automatic annotation of RNA-protein interactions for NDB ». Bowling Green State University / OhioLINK, 2017. http://rave.ohiolink.edu/etdc/view?acc_num=bgsu1496412736120654.
Texte intégralFlowers, Andrew E. « Metal-binding proteins in tropical marine invertebrates ». Thesis, Queensland University of Technology, 1995.
Trouver le texte intégralTsang, Cheuk-nam, et 曾卓南. « Mining of proteins and motifs associated with bismuth binding and monitoring metal uptake in helicobacter pylori by metallomics ». Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2011. http://hub.hku.hk/bib/B46503535.
Texte intégralPutignano, Valeria. « Bioinformatics tools for metalloprotein analysis ». Doctoral thesis, 2019. http://hdl.handle.net/2158/1181143.
Texte intégralSHARMA, SHAILESH. « Bioinformatics of metal binding proteins and genome wide analysis ». Doctoral thesis, 2009. http://hdl.handle.net/2158/485462.
Texte intégralSala, Davide. « Application of molecular dynamics to the understanding of metal-binding macromolecules and their adducts ». Doctoral thesis, 2019. http://hdl.handle.net/2158/1179863.
Texte intégralBilder, Patrick Wallace. « The structural diversity of metal binding sites in bacterial metalloproteins : the disordered iron-binding coil of iron-sulfur cluster protein A and the stable zinc ribbon motif of the carboxyltransferase subunit of acetyl-coa carboxylase ». Diss., 2005. http://etd.library.vanderbilt.edu/ETD-db/available/etd-01222006-213113/.
Texte intégral« Metal contamination and studies of copper-binding proteins from tilapia collected from Shing Mun River ». 2005. http://library.cuhk.edu.hk/record=b5896403.
Texte intégralThesis (M.Phil.)--Chinese University of Hong Kong, 2005.
Includes bibliographical references (leaves 112-120).
Abstracts in English and Chinese.
Abstract --- p.i
摘要 --- p.iii
Acknowledgements --- p.v
Table of Contents --- p.vi
List of Tables --- p.ix
List of Figures --- p.x
Abbreviations --- p.xii
Chapter Chapter 1 --- Introduction --- p.1
Chapter 1.1 --- Heavy metals contaminations in Shing Mun River --- p.1
Chapter 1.1 --- Importance of copper regulation and role of liverin copper metabolism --- p.6
Chapter 1.1.1 --- Role of copper --- p.6
Chapter 1.1.2 --- Toxicity due to unbalanced copper regulation --- p.7
Chapter 1.1.3 --- Function of liver in copper detoxification --- p.9
Chapter 1.2 --- Aims and rationale of this research --- p.11
Chapter Chapter 2 --- Heavy metal concentrations of tilapia samples collected from Shing Mun River --- p.12
Chapter 2.1 --- Introduction --- p.12
Chapter 2.1.1 --- Sampling sites - Fo Tan and Siu Lek Yuen Nullah --- p.12
Chapter 2.1.2 --- Tilapia samples collected from the sites --- p.16
Chapter 2.1.3 --- Tilapia as a study model --- p.18
Chapter 2.1.4 --- Bioavailability of heavy metals in water --- p.19
Chapter 2.1.5 --- Metal content in liver --- p.20
Chapter 2.1.6 --- Aim of this chapter --- p.20
Chapter 2.2 --- Materials and Methods --- p.22
Chapter 2.2.1 --- Collection of control and field samples --- p.22
Chapter 2.2.2 --- Heavy metal concentrations determination --- p.23
Chapter 2.2.3 --- Homogenization of liver cells --- p.24
Chapter 2.2.4 --- Subcellular fractionation --- p.24
Chapter 2.2.5 --- Determination of copper and zinc content in each subcellular fraction --- p.253
Chapter 2.3 --- Results --- p.27
Chapter 2.3.1 --- Physical data --- p.27
Chapter 2.3.2 --- Metal concentrations in liver and muscle --- p.27
Chapter 2.3.3 --- Copper and zinc subcellular distribution in liver cell --- p.33
Chapter 2.4 --- Discussion --- p.36
Chapter 2.4.1 --- Difference in metal concentration between sites --- p.36
Chapter 2.4.2 --- Copper contamination in water and fish organ (muscle and liver) from the Shing Mun River --- p.36
Chapter 2.4.3 --- Comparison of metal content in muscle and liver at Fo Tan site with previous studies --- p.39
Chapter 2.4.4 --- Copper and zinc concentrations in the liver of tilapia --- p.42
Chapter 2.4.5 --- Copper and zinc sebcellular distribution in the liver of tilapia --- p.43
Chapter Chapter 3 --- Column chromatography of hepatic proteins from tilapias --- p.44
Chapter 3.1 --- Transport of metals from circulatory system to liver --- p.44
Chapter 3.1.1 --- Copper transporting plasma proteins in vertebrates --- p.44
Chapter 3.1.2 --- Copper uptake into hepatocytes --- p.45
Chapter 3.1.3 --- Intracellular metabolism of copper --- p.48
Chapter 3.1.4 --- Mechanism of copper toxicity following excess accumulation --- p.49
Chapter 3.1.5 --- Aim of this chapter --- p.50
Chapter 3.2 --- Materials and Methods --- p.51
Chapter 3.2.1 --- Purification of liver cytosolic proteins by gel-filtration column chromatography --- p.51
Chapter 3.2.2 --- Copper content detection in elution --- p.52
Chapter 3.2.3 --- Analysis of peaks from elution profile using tricine gel SDS PAGE --- p.53
Chapter 3.3 --- Results --- p.55
Chapter 3.3.1 --- Gel-filtration liquid chromatography elution profiles --- p.55
Chapter 3.3.2 --- SDS PAGE analysis of peaks in elution profiles --- p.51
Chapter 3.4 --- Discussion --- p.54
Chapter 3.4.1 --- Comparison of gel filtration profiles of sample liver cytosol between sites and sexes --- p.64
Chapter 3.4.2 --- Possible proteins in peaks found in the gel filtration profiles --- p.64
Chapter 3.4.3 --- Common copper-indeced proteins --- p.67
Chapter 3.5 --- Conclusion --- p.70
Chapter Chapter 4 --- Two-dimensional electrophoresis of hepatic cutosol of tilapias caught from Shing Mun River and copper-treated HEPA T1 cell --- p.72
Chapter 4.1 --- Introduction --- p.72
Chapter 4.1.1 --- The need of ´بin vitro' experiment --- p.72
Chapter 4.1.2 --- Choice of cell line --- p.73
Chapter 4.1.3 --- Aim of this chapter --- p.74
Chapter 4.2 --- Materials and Methods --- p.76
Chapter 4.2.1 --- HEPA T1 cell cultivation --- p.76
Chapter 4.2.2 --- Copper exposure of HEPA T1 cell --- p.77
Chapter 4.2.3 --- Subcellular protein extraction of the copper-treated HEPA T1 cells --- p.77
Chapter 4.2.4 --- Bicinchoninic Acidic (BCA) Protein Assay --- p.79
Chapter 4.2.5 --- Two-dimensional gel electrophoresis --- p.79
Chapter 4.3 --- Results --- p.83
Chapter 4.3.1 --- Graphical presentation of spots observed on 2-dimensional gel of field samples and copper-injected samples --- p.33
Chapter 4.3.2 --- Graphical presentation of spots detected on 2-dimensional gel of HEPAT1 cells --- p.84
Chapter 4.3.3 --- Comparison of matched spots on 2-dimensional gels among control and copper-treated HEPAT1 cells --- p.97
Chapter 4.4 --- Discussion --- p.105
Chapter 4.4.1 --- Comparison of the spot patterns between field sample and copperOtreated HEPA T1 cells --- p.105
Chapter 4.5 --- Conclusion --- p.107
Chapter Chapter 5 --- General Discussions --- p.108
Chapter 5.2 --- Research Overview --- p.108
Chapter 5.2 --- Characterization of metal binding proteins from the cytosol of liver of tilapia --- p.109
REFERENCES --- p.112
Livres sur le sujet "Bioinformatics, metalloproteins, metal-binding proteins"
Kägi, Jeremias H. R., 1930- et Kojima Yutaka 1933-, dir. Metallothionein II : Proceedings of the Second International Meeting on Metallothionein and Other Low Molecular Weight Metal-binding Proteins : Zürich, August 21-24, 1985. Basel : Birkhäuser Verlag, 1987.
Trouver le texte intégralChapitres de livres sur le sujet "Bioinformatics, metalloproteins, metal-binding proteins"
« Metal-Binding Proteins ». Dans Encyclopedia of Metalloproteins, 1378. New York, NY : Springer New York, 2013. http://dx.doi.org/10.1007/978-1-4614-1533-6_100768.
Texte intégralGralka, Ewa, Daniela Valensin, Maurizio Remelli et Henryk Kozlowski. « Modelling of the Metal Binding Sites in Proteins Involved in Neurodegeneration ». Dans Brain Diseases and Metalloproteins, 33–80. Pan Stanford Publishing, 2012. http://dx.doi.org/10.1201/b12777-4.
Texte intégral