Artículos de revistas sobre el tema "Unique molecular identifiers"
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Schmierer, Bernhard, Sandeep K. Botla, Jilin Zhang, Mikko Turunen, Teemu Kivioja y Jussi Taipale. "CRISPR/Cas9 screening using unique molecular identifiers". Molecular Systems Biology 13, n.º 10 (octubre de 2017): 945. http://dx.doi.org/10.15252/msb.20177834.
Texto completoIslam, Saiful, Amit Zeisel, Simon Joost, Gioele La Manno, Pawel Zajac, Maria Kasper, Peter Lönnerberg y Sten Linnarsson. "Quantitative single-cell RNA-seq with unique molecular identifiers". Nature Methods 11, n.º 2 (22 de diciembre de 2013): 163–66. http://dx.doi.org/10.1038/nmeth.2772.
Texto completoLiu, Daniel. "Algorithms for efficiently collapsing reads with Unique Molecular Identifiers". PeerJ 7 (16 de diciembre de 2019): e8275. http://dx.doi.org/10.7717/peerj.8275.
Texto completoKivioja, Teemu, Anna Vähärautio, Kasper Karlsson, Martin Bonke, Martin Enge, Sten Linnarsson y Jussi Taipale. "Counting absolute numbers of molecules using unique molecular identifiers". Nature Methods 9, n.º 1 (20 de noviembre de 2011): 72–74. http://dx.doi.org/10.1038/nmeth.1778.
Texto completoJohansson, Gustav, Melita Kaltak, Cristiana Rîmniceanu, Avadhesh K. Singh, Jan Lycke, Clas Malmeström, Michael Hühn, Outi Vaarala, Susanna Cardell y Anders Ståhlberg. "Ultrasensitive DNA Immune Repertoire Sequencing Using Unique Molecular Identifiers". Clinical Chemistry 66, n.º 9 (20 de agosto de 2020): 1228–37. http://dx.doi.org/10.1093/clinchem/hvaa159.
Texto completoPflug, Florian G. y Arndt von Haeseler. "TRUmiCount: correctly counting absolute numbers of molecules using unique molecular identifiers". Bioinformatics 34, n.º 18 (16 de abril de 2018): 3137–44. http://dx.doi.org/10.1093/bioinformatics/bty283.
Texto completoClement, Kendell, Rick Farouni, Daniel E. Bauer y Luca Pinello. "AmpUMI: design and analysis of unique molecular identifiers for deep amplicon sequencing". Bioinformatics 34, n.º 13 (27 de junio de 2018): i202—i210. http://dx.doi.org/10.1093/bioinformatics/bty264.
Texto completoBabnigg, György y Carol S. Giometti. "A database of unique protein sequence identifiers for proteome studies". PROTEOMICS 6, n.º 16 (agosto de 2006): 4514–22. http://dx.doi.org/10.1002/pmic.200600032.
Texto completoJin, Huan, Joshua M. Mitchell y Hunter N. B. Moseley. "Atom Identifiers Generated by a Neighborhood-Specific Graph Coloring Method Enable Compound Harmonization across Metabolic Databases". Metabolites 10, n.º 9 (11 de septiembre de 2020): 368. http://dx.doi.org/10.3390/metabo10090368.
Texto completoEgorov, Evgeny S., Ekaterina M. Merzlyak, Andrew A. Shelenkov, Olga V. Britanova, George V. Sharonov, Dmitriy B. Staroverov, Dmitriy A. Bolotin et al. "Quantitative Profiling of Immune Repertoires for Minor Lymphocyte Counts Using Unique Molecular Identifiers". Journal of Immunology 194, n.º 12 (8 de mayo de 2015): 6155–63. http://dx.doi.org/10.4049/jimmunol.1500215.
Texto completoSmith, Tom, Andreas Heger y Ian Sudbery. "UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy". Genome Research 27, n.º 3 (18 de enero de 2017): 491–99. http://dx.doi.org/10.1101/gr.209601.116.
Texto completoHu, Yu, Kai Wang y Mingyao Li. "Detecting differential alternative splicing events in scRNA-seq with or without Unique Molecular Identifiers". PLOS Computational Biology 16, n.º 6 (5 de junio de 2020): e1007925. http://dx.doi.org/10.1371/journal.pcbi.1007925.
Texto completoKarst, Søren M., Ryan M. Ziels, Rasmus H. Kirkegaard, Emil A. Sørensen, Daniel McDonald, Qiyun Zhu, Rob Knight y Mads Albertsen. "High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing". Nature Methods 18, n.º 2 (11 de enero de 2021): 165–69. http://dx.doi.org/10.1038/s41592-020-01041-y.
Texto completoXu, Chang, Xiujing Gu, Raghavendra Padmanabhan, Zhong Wu, Quan Peng, John DiCarlo y Yexun Wang. "smCounter2: an accurate low-frequency variant caller for targeted sequencing data with unique molecular identifiers". Bioinformatics 35, n.º 8 (6 de septiembre de 2018): 1299–309. http://dx.doi.org/10.1093/bioinformatics/bty790.
Texto completoRobinson, Jacob E. y Christine E. Cutucache. "Unique molecular identifiers of indolent versus aggressive phenotyping in non-Hodgkin lymphoma: spotlight on SMZL." Journal of Immunology 200, n.º 1_Supplement (1 de mayo de 2018): 123.6. http://dx.doi.org/10.4049/jimmunol.200.supp.123.6.
Texto completoKou, Ruqin, Ham Lam, Hairong Duan, Li Ye, Narisra Jongkam, Weizhi Chen, Shifang Zhang y Shihong Li. "Benefits and Challenges with Applying Unique Molecular Identifiers in Next Generation Sequencing to Detect Low Frequency Mutations". PLOS ONE 11, n.º 1 (11 de enero de 2016): e0146638. http://dx.doi.org/10.1371/journal.pone.0146638.
Texto completoAmstler, S., L. Forer, G. Streiter, S. Di Maio, B. Paulweber, F. Kronenberg, S. Schönherr y S. Coassin. "Nanopore sequencing with unique molecular identifiers preserves SNP haplotypes of the LPA KIV-2 copy number variation". Atherosclerosis 379 (agosto de 2023): S47. http://dx.doi.org/10.1016/j.atherosclerosis.2023.06.202.
Texto completoYesmin, Nusrat, Sabrina M. Elias, Md Sazzadur Rahman, Taslima Haque, A. K. M. Mahbub Hasan y Zeba I. Seraj. "Unique Genotypic Differences Discovered among Indigenous Bangladeshi Rice Landraces". International Journal of Genomics 2014 (2014): 1–11. http://dx.doi.org/10.1155/2014/210328.
Texto completoMao, Ruifang, Shanshan Xiao, Rui Lin, Yuchen Wang y Tao Wang. "Technical validation of a high-sensitivity target capture NGS assay using unique molecular identifier approach." Journal of Clinical Oncology 38, n.º 15_suppl (20 de mayo de 2020): e13657-e13657. http://dx.doi.org/10.1200/jco.2020.38.15_suppl.e13657.
Texto completoBürckert, Jean-Philippe, William J. Faison, Danielle E. Mustin, Axel R. S. X. Dubois, Regina Sinner, Oliver Hunewald, Anke Wienecke-Baldacchino, Anne Brieger y Claude P. Muller. "High-throughput sequencing of murine immunoglobulin heavy chain repertoires using single side unique molecular identifiers on an Ion Torrent PGM". Oncotarget 9, n.º 54 (13 de julio de 2018): 30225–39. http://dx.doi.org/10.18632/oncotarget.25493.
Texto completoGligoric, Nenad, Srdjan Krco, Liisa Hakola, Kaisa Vehmas, Suparna De, Klaus Moessner, Kristoffer Jansson, Ingmar Polenz y Rob van Kranenburg. "SmartTags: IoT Product Passport for Circular Economy Based on Printed Sensors and Unique Item-Level Identifiers". Sensors 19, n.º 3 (30 de enero de 2019): 586. http://dx.doi.org/10.3390/s19030586.
Texto completoYang, Yang, Di Zheng, Chunyan Wu, Analyn Lizaso, Junyi Ye, Shannon Chuai, Jian Ni, Jianfang Xu y Gening Jiang. "Detecting Ultralow Frequency Mutation in Circulating Cell‐Free DNA of Early‐Stage Nonsmall Cell Lung Cancer Patients with Unique Molecular Identifiers". Small Methods 3, n.º 10 (26 de abril de 2019): 1900206. http://dx.doi.org/10.1002/smtd.201900206.
Texto completoAdenipekun, C. O., L. A. Ogunkanmi y O. Onibonoje. "Morphological and molecular assessment of mushroom (Lentinus Squarrosulus) (mont.) Singer". Ife Journal of Science 23, n.º 2 (17 de noviembre de 2021): 43–52. http://dx.doi.org/10.4314/ijs.v23i2.5.
Texto completoChoi, Ashley, Samuel Meier, Silvia Fenoglio, Tianshu Feng, Justin Engel, Binzhang Shen, Shangtao Liu et al. "Abstract 1224: UMIBB: A novel nonparametric Bayesian method improves robustness and sensitivity of analysis in pooled CRISPR-Cas9 screens leveraging unique molecular identifiers". Cancer Research 82, n.º 12_Supplement (15 de junio de 2022): 1224. http://dx.doi.org/10.1158/1538-7445.am2022-1224.
Texto completoBaer, Constance Regina, Niroshan Nadarajah, Claudia Haferlach, Wolfgang Kern y Torsten Haferlach. "The Use of Unique Molecular Identifiers (UMIs) Strongly Improves Sequencing Detection Limits Allowing Earlier Detection of Small TP53 Mutated Clones in Leukemias". Blood 128, n.º 22 (2 de diciembre de 2016): 2027. http://dx.doi.org/10.1182/blood.v128.22.2027.2027.
Texto completoXie, Hongyu, Yaxi Zhang, Pei Zhihua, Jianing Yu, Yiqian Liu, Shiqi Zheng, Geng Chen, Weizhi Chen y Ji He. "A unique molecular identifier-based and clonal hematopoiesis-aware approach for accurate mutation calling in cell-free DNA assays." Journal of Clinical Oncology 39, n.º 15_suppl (20 de mayo de 2021): e22515-e22515. http://dx.doi.org/10.1200/jco.2021.39.15_suppl.e22515.
Texto completoKoelling, Nils, Marie Bernkopf, Eduardo Calpena, Geoffrey J. Maher, Kerry A. Miller, Hannah K. Ralph, Anne Goriely y Andrew O. M. Wilkie. "amplimap: a versatile tool to process and analyze targeted NGS data". Bioinformatics 35, n.º 24 (26 de julio de 2019): 5349–50. http://dx.doi.org/10.1093/bioinformatics/btz582.
Texto completoHauck, Nastasja, Josiane Kirpach, Christina Kiefer, Sophie Farinelle, Sophie Maucourant, Stephen Morris, William Rosenberg, Feng He, Claude Muller y I.-Na Lu. "Applying Unique Molecular Identifiers in Next Generation Sequencing Reveals a Constrained Viral Quasispecies Evolution under Cross-Reactive Antibody Pressure Targeting Long Alpha Helix of Hemagglutinin". Viruses 10, n.º 4 (25 de marzo de 2018): 148. http://dx.doi.org/10.3390/v10040148.
Texto completoZhou, Shuntai y Ronald Swanstrom. "Fact and Fiction about 1%: Next Generation Sequencing and the Detection of Minor Drug Resistant Variants in HIV-1 Populations with and without Unique Molecular Identifiers". Viruses 12, n.º 8 (4 de agosto de 2020): 850. http://dx.doi.org/10.3390/v12080850.
Texto completoGu, Xiaolin, Wenjia Wu, Xiaodan Gu, Zhen Ling, Ming Yang y Aibo Song. "Probe Request Based Device Identification Attack and Defense". Sensors 20, n.º 16 (17 de agosto de 2020): 4620. http://dx.doi.org/10.3390/s20164620.
Texto completoYU, GONG-XIN. "RULEMINER: A KNOWLEDGE SYSTEM FOR SUPPORTING HIGH-THROUGHPUT PROTEIN FUNCTION ANNOTATIONS". Journal of Bioinformatics and Computational Biology 02, n.º 04 (diciembre de 2004): 595–617. http://dx.doi.org/10.1142/s0219720004000752.
Texto completoYang, Xiao, Yasushi Saito, Arjun Rao, Hyunsung John Kim, Pranav Singh, Eric Scott, Matthew Larson, Wenying Pan, Mohini Desai y Earl Hubbell. "Alignment-free filtering for cfNA fusion fragments". Bioinformatics 35, n.º 14 (julio de 2019): i225—i232. http://dx.doi.org/10.1093/bioinformatics/btz346.
Texto completoKlepikova, Anna V., Artem S. Kasianov, Mikhail S. Chesnokov, Natalia L. Lazarevich, Aleksey A. Penin y Maria Logacheva. "Effect of method of deduplication on estimation of differential gene expression using RNA-seq". PeerJ 5 (16 de marzo de 2017): e3091. http://dx.doi.org/10.7717/peerj.3091.
Texto completoYadav, Divya, Balwant Raj y Balwinder Raj. "Design and Simulation of Low Power Microcontroller for Internet of Things Applications". Sensor Letters 18, n.º 5 (1 de mayo de 2020): 401–9. http://dx.doi.org/10.1166/sl.2020.4241.
Texto completoPrünte, Philipp, Daniel Schoepflin y Thorsten Schüppstuhl. "A Comparative Study of Visual Identification Methods for Highly Similar Engine Tubes in Aircraft Maintenance, Repair and Overhaul". Sensors 23, n.º 15 (28 de julio de 2023): 6779. http://dx.doi.org/10.3390/s23156779.
Texto completoImoto, Yusuke, Tomonori Nakamura, Emerson G. Escolar, Michio Yoshiwaki, Yoji Kojima, Yukihiro Yabuta, Yoshitaka Katou, Takuya Yamamoto, Yasuaki Hiraoka y Mitinori Saitou. "Resolution of the curse of dimensionality in single-cell RNA sequencing data analysis". Life Science Alliance 5, n.º 12 (9 de agosto de 2022): e202201591. http://dx.doi.org/10.26508/lsa.202201591.
Texto completovan Brug, Heather E., Frits R. Rosendaal, Liza N. van Steenbergen, Rob G. H. H. Nelissen y Maaike G. J. Gademan. "Data linkage of two national databases: Lessons learned from linking the Dutch Arthroplasty Register with the Dutch Foundation for Pharmaceutical Statistics". PLOS ONE 18, n.º 3 (8 de marzo de 2023): e0282519. http://dx.doi.org/10.1371/journal.pone.0282519.
Texto completoAli, Dema, Dana Alhattab, Hanan Jafar, Malak Alzubide, Nour Sharar, Salwa Bdour y Abdalla Awidi. "Differential Marker Expression between Keratinocyte Stem Cells and Their Progeny Generated from a Single Colony". International Journal of Molecular Sciences 22, n.º 19 (6 de octubre de 2021): 10810. http://dx.doi.org/10.3390/ijms221910810.
Texto completoSong, Chen, Ariel Erijman, Bradley W. Langhorst, Pingfang Liu, Eileen T. Dimalanta y Theodore B. Davis. "Abstract 5628: Immune repertoire sequencing facilitates gamma delta T cell clonal determination". Cancer Research 82, n.º 12_Supplement (15 de junio de 2022): 5628. http://dx.doi.org/10.1158/1538-7445.am2022-5628.
Texto completoWilkins, Oscar G., Charlotte Capitanchik, Nicholas M. Luscombe y Jernej Ule. "Ultraplex: A rapid, flexible, all-in-one fastq demultiplexer". Wellcome Open Research 6 (7 de junio de 2021): 141. http://dx.doi.org/10.12688/wellcomeopenres.16791.1.
Texto completoCasparie, M., A. T. M. G. Tiebosch, G. Burger, H. Blauwgeers, A. van de Pol, J. H. J. M. van Krieken y G. A. Meijer. "Pathology Databanking and Biobanking in The Netherlands, a Central Role for PALGA, the Nationwide Histopathology and Cytopathology Data Network and Archive". Analytical Cellular Pathology 29, n.º 1 (1 de enero de 2007): 19–24. http://dx.doi.org/10.1155/2007/971816.
Texto completoKivioja, Teemu, Anna Vähärautio, Kasper Karlsson, Martin Bonke, Sten Linnarsson y Jussi Taipale. "Counting absolute number of molecules using unique molecular identifiers". Nature Precedings, 14 de abril de 2011. http://dx.doi.org/10.1038/npre.2011.5903.1.
Texto completoSaunders, Klay, Andrew G. Bert, B. Kate Dredge, John Toubia, Philip A. Gregory, Katherine A. Pillman, Gregory J. Goodall y Cameron P. Bracken. "Insufficiently complex unique-molecular identifiers (UMIs) distort small RNA sequencing". Scientific Reports 10, n.º 1 (3 de septiembre de 2020). http://dx.doi.org/10.1038/s41598-020-71323-0.
Texto completoZhu, Tao, Keyan Liao, Rongfang Zhou, Chunjiao Xia y Weibo Xie. "ATAC-seq with unique molecular identifiers improves quantification and footprinting". Communications Biology 3, n.º 1 (13 de noviembre de 2020). http://dx.doi.org/10.1038/s42003-020-01403-4.
Texto completoPhilpott, Martin, Jonathan Watson, Anjan Thakurta, Tom Brown, Tom Brown, Udo Oppermann y Adam P. Cribbs. "Nanopore sequencing of single-cell transcriptomes with scCOLOR-seq". Nature Biotechnology, 1 de julio de 2021. http://dx.doi.org/10.1038/s41587-021-00965-w.
Texto completoCrysup, Benjamin, Sammed Mandape, Jonathan L. King, Melissa Muenzler, Kapema Bupe Kapema y August E. Woerner. "Using Unique Molecular Identifiers to Improve Allele Calling in Low-Template Mixtures". Forensic Science International: Genetics, noviembre de 2022, 102807. http://dx.doi.org/10.1016/j.fsigen.2022.102807.
Texto completoGirardot, Charles, Jelle Scholtalbers, Sajoscha Sauer, Shu-Yi Su y Eileen E. M. Furlong. "Je, a versatile suite to handle multiplexed NGS libraries with unique molecular identifiers". BMC Bioinformatics 17, n.º 1 (8 de octubre de 2016). http://dx.doi.org/10.1186/s12859-016-1284-2.
Texto completoFields, Bryden, Sara Moeskjær, Ville‐Petri Friman, Stig U. Andersen y J. Peter W. Young. "MAUI‐seq: Metabarcoding using amplicons with unique molecular identifiers to improve error correction". Molecular Ecology Resources, 29 de noviembre de 2020. http://dx.doi.org/10.1111/1755-0998.13294.
Texto completoWoerner, August E., Sammed Mandape, Jonathan L. King, Melissa Muenzler, Benjamin Crysup y Bruce Budowle. "Reducing noise and stutter in short tandem repeat loci with unique molecular identifiers". Forensic Science International: Genetics, diciembre de 2020, 102459. http://dx.doi.org/10.1016/j.fsigen.2020.102459.
Texto completoTownes, F. William y Rafael A. Irizarry. "Quantile normalization of single-cell RNA-seq read counts without unique molecular identifiers". Genome Biology 21, n.º 1 (3 de julio de 2020). http://dx.doi.org/10.1186/s13059-020-02078-0.
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