Artículos de revistas sobre el tema "Soil metagenomic"
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Navarrete, Acacio Aparecido, Eliamar Aparecida Nascimbém Pedrinho, Luciano Takeshi Kishi, Camila Cesário Fernandes, Victoria Romancini Toledo, Rita de Cassia Félix Alvarez, Elisângela de Souza Loureiro, Leandro Nascimento Lemos, Siu Mui Tsai y Eliana Gertrudes de Macedo Lemos. "Taxonomic and nitrogen-cycling microbial community functional profiles of sugarcane and adjacent forest soils in Southeast Brazil". MOJ Ecology & Environmental Sciences 6, n.º 4 (5 de julio de 2021): 119–25. http://dx.doi.org/10.15406/mojes.2021.06.00224.
Texto completoMeier, Matthew J., E. Suzanne Paterson y Iain B. Lambert. "Use of Substrate-Induced Gene Expression in Metagenomic Analysis of an Aromatic Hydrocarbon-Contaminated Soil". Applied and Environmental Microbiology 82, n.º 3 (20 de noviembre de 2015): 897–909. http://dx.doi.org/10.1128/aem.03306-15.
Texto completoWerbin, Zoey R., Briana Hackos, Jorge Lopez-Nava, Michael C. Dietze y Jennifer M. Bhatnagar. "The National Ecological Observatory Network’s soil metagenomes: assembly and basic analysis". F1000Research 10 (23 de marzo de 2022): 299. http://dx.doi.org/10.12688/f1000research.51494.2.
Texto completoPuranik, Sampada, Rajesh Ramavadh Pal, Ravi Prabhakar More y Hemant J. Purohit. "Metagenomic approach to characterize soil microbial diversity of Phumdi at Loktak Lake". Water Science and Technology 74, n.º 9 (9 de agosto de 2016): 2075–86. http://dx.doi.org/10.2166/wst.2016.370.
Texto completoSimon, Carola y Rolf Daniel. "Metagenomic Analyses: Past and Future Trends". Applied and Environmental Microbiology 77, n.º 4 (17 de diciembre de 2010): 1153–61. http://dx.doi.org/10.1128/aem.02345-10.
Texto completoHuy, Pham Quang, Nguyen Kim Thoa y Dang Thi Cam Ha. "Diversity of reductive dechlorinating bacteria and archaea in herbicide/dioxin-contaminated soils from Bien Hoa airbase using metagenomic approach". Vietnam Journal of Biotechnology 18, n.º 4 (24 de mayo de 2021): 773–84. http://dx.doi.org/10.15625/1811-4989/18/4/15799.
Texto completoCastillo Villamizar, Genis Andrés, Heiko Nacke, Marc Boehning, Kristin Herz y Rolf Daniel. "Functional Metagenomics Reveals an Overlooked Diversity and Novel Features of Soil-Derived Bacterial Phosphatases and Phytases". mBio 10, n.º 1 (29 de enero de 2019): e01966-18. http://dx.doi.org/10.1128/mbio.01966-18.
Texto completoWerbin, Zoey R., Briana Hackos, Michael C. Dietze y Jennifer M. Bhatnagar. "The National Ecological Observatory Network’s soil metagenomes: assembly and basic analysis". F1000Research 10 (19 de abril de 2021): 299. http://dx.doi.org/10.12688/f1000research.51494.1.
Texto completoDelmont, Tom O., Patrick Robe, Sébastien Cecillon, Ian M. Clark, Florentin Constancias, Pascal Simonet, Penny R. Hirsch y Timothy M. Vogel. "Accessing the Soil Metagenome for Studies of Microbial Diversity". Applied and Environmental Microbiology 77, n.º 4 (23 de diciembre de 2010): 1315–24. http://dx.doi.org/10.1128/aem.01526-10.
Texto completoOwen, Jeremy G., Zachary Charlop-Powers, Alexandra G. Smith, Melinda A. Ternei, Paula Y. Calle, Boojala Vijay B. Reddy, Daniel Montiel y Sean F. Brady. "Multiplexed metagenome mining using short DNA sequence tags facilitates targeted discovery of epoxyketone proteasome inhibitors". Proceedings of the National Academy of Sciences 112, n.º 14 (23 de marzo de 2015): 4221–26. http://dx.doi.org/10.1073/pnas.1501124112.
Texto completoDjokic, Lidija, M. Savic, Tanja Narancic y Branka Vasiljevic. "Metagenomic analysis of soil microbial communities". Archives of Biological Sciences 62, n.º 3 (2010): 559–64. http://dx.doi.org/10.2298/abs1003559d.
Texto completoZorrilla, Francisco, Filip Buric, Kiran R. Patil y Aleksej Zelezniak. "metaGEM: reconstruction of genome scale metabolic models directly from metagenomes". Nucleic Acids Research 49, n.º 21 (6 de octubre de 2021): e126-e126. http://dx.doi.org/10.1093/nar/gkab815.
Texto completoCarver, Sarah M., Nadia Nikulin y Jenny Kao-Kniffin. "Uncovering Plant Growth-Mediating Allelochemicals Produced by Soil Microorganisms". Weed Science 64, n.º 1 (marzo de 2016): 119–28. http://dx.doi.org/10.1614/ws-d-15-00095.1.
Texto completoLiles, Mark R., Lynn L. Williamson, Jitsupang Rodbumrer, Vigdis Torsvik, Robert M. Goodman y Jo Handelsman. "Recovery, Purification, and Cloning of High-Molecular-Weight DNA from Soil Microorganisms". Applied and Environmental Microbiology 74, n.º 10 (21 de marzo de 2008): 3302–5. http://dx.doi.org/10.1128/aem.02630-07.
Texto completoPinnell, Lee J., Eric Dunford, Patrick Ronan, Martina Hausner y Josh D. Neufeld. "Recovering glycoside hydrolase genes from active tundra cellulolytic bacteria". Canadian Journal of Microbiology 60, n.º 7 (julio de 2014): 469–76. http://dx.doi.org/10.1139/cjm-2014-0193.
Texto completoKim, Kyoung-Ho, Ho-Won Chang, Young-Do Nam, Seong Woon Roh, Min-Soo Kim, Youlboong Sung, Che Ok Jeon, Hee-Mock Oh y Jin-Woo Bae. "Amplification of Uncultured Single-Stranded DNA Viruses from Rice Paddy Soil". Applied and Environmental Microbiology 74, n.º 19 (15 de agosto de 2008): 5975–85. http://dx.doi.org/10.1128/aem.01275-08.
Texto completoSousa, Joana, Sara C. Silvério, Angela M. A. Costa y Ligia R. Rodrigues. "Metagenomic Approaches as a Tool to Unravel Promising Biocatalysts from Natural Resources: Soil and Water". Catalysts 12, n.º 4 (30 de marzo de 2022): 385. http://dx.doi.org/10.3390/catal12040385.
Texto completoITOH, HIDEOMI, SATOSHI ISHII y KEISHI SENOO. "III-1. Metagenomics in agriculture: Metagenomic analysis of rice paddy field soil". NIPPON SUISAN GAKKAISHI 77, n.º 2 (2011): 254. http://dx.doi.org/10.2331/suisan.77.254.
Texto completoCastillo Arteaga, Roger David, Simone Ichiwaki, Karen Massini, Leandro Maza-Garrido, Edith Mariela Burbano-Rosero y Gabriel Padilla. "Screening of polyketide genes from Brazilian Atlantic Forest soil". Universitas Scientiarum 22, n.º 1 (3 de abril de 2017): 87. http://dx.doi.org/10.11144/javeriana.sc22-1.sopg.
Texto completoSatoh, Soichirou, Rei Tanaka, Makio Yokono, Daiji Endoh, Tetsuo Yabuki y Ayumi Tanaka. "Phylogeny analysis of whole protein-coding genes in metagenomic data detected an environmental gradient for the microbiota". PLOS ONE 18, n.º 2 (2 de febrero de 2023): e0281288. http://dx.doi.org/10.1371/journal.pone.0281288.
Texto completoMa, Bin, Erinne Stirling, Yuanhui Liu, Kankan Zhao, Jizhong Zhou, Brajesh K. Singh, Caixian Tang, Randy A. Dahlgren y Jianming Xu. "Soil Biogeochemical Cycle Couplings Inferred from a Function-Taxon Network". Research 2021 (10 de marzo de 2021): 1–10. http://dx.doi.org/10.34133/2021/7102769.
Texto completoMcGhee, Jordan J., Nick Rawson, Barbara A. Bailey, Antonio Fernandez-Guerra, Laura Sisk-Hackworth y Scott T. Kelley. "Meta-SourceTracker: application of Bayesian source tracking to shotgun metagenomics". PeerJ 8 (24 de marzo de 2020): e8783. http://dx.doi.org/10.7717/peerj.8783.
Texto completoEpihov, Dimitar Z., Kristin Saltonstall, Sarah A. Batterman, Lars O. Hedin, Jefferson S. Hall, Michiel van Breugel, Jonathan R. Leake y David J. Beerling. "Legume–microbiome interactions unlock mineral nutrients in regrowing tropical forests". Proceedings of the National Academy of Sciences 118, n.º 11 (8 de marzo de 2021): e2022241118. http://dx.doi.org/10.1073/pnas.2022241118.
Texto completoXu, Peng, Cyrus Modavi, Benjamin Demaree, Frederick Twigg, Benjamin Liang, Chen Sun, Wenjun Zhang y Adam R. Abate. "Microfluidic automated plasmid library enrichment for biosynthetic gene cluster discovery". Nucleic Acids Research 48, n.º 8 (25 de febrero de 2020): e48-e48. http://dx.doi.org/10.1093/nar/gkaa131.
Texto completoDelegan, Yanina, Svetlana Sushkova, Tatiana Minkina, Andrey Filonov, Yulia Kocharovskaya, Konstantin Demin, Andrey Gorovtsov et al. "Diversity and Metabolic Potential of a PAH-Degrading Bacterial Consortium in Technogenically Contaminated Haplic Chernozem, Southern Russia". Processes 10, n.º 12 (1 de diciembre de 2022): 2555. http://dx.doi.org/10.3390/pr10122555.
Texto completoAhmad, Mohd Fadzli, Hasdianty Abdullah, Muhammad Naim Hassan, Muhammad Imran Jamaludin, Ashvini Sivam, Kazuhiro Komatsu, Irni Suhayu Sapian et al. "Topographically Distinguished Microbiome Taxonomy and Stress-Response Genes of Royal Belum Rainforest and Raja Muda Musa Peat Swamp Revealed through Metagenomic Inquisition". International Journal of Molecular Sciences 24, n.º 1 (3 de enero de 2023): 872. http://dx.doi.org/10.3390/ijms24010872.
Texto completoJaswal, Pathak, III, III, Seaman, Stothard, Krivushin, Blom, Rupp y Chauhan. "Metagenomics-Guided Survey, Isolation, and Characterization of Uranium Resistant Microbiota from the Savannah River Site, USA". Genes 10, n.º 5 (28 de abril de 2019): 325. http://dx.doi.org/10.3390/genes10050325.
Texto completoMonier, Jean-Michel, Sandrine Demanèche, Tom O. Delmont, Alban Mathieu, Timothy M. Vogel y Pascal Simonet. "Metagenomic exploration of antibiotic resistance in soil". Current Opinion in Microbiology 14, n.º 3 (junio de 2011): 229–35. http://dx.doi.org/10.1016/j.mib.2011.04.010.
Texto completoEcheverría-Beirute, Fabián, Ingrid Varela-Benavides, Jose P Jiménez-Madrigal, Milagro Carvajal-Chacon y Tomás Guzmán-Hernández. "eDNA extraction protocol for metagenomic studies in tropical soils". BioTechniques 71, n.º 6 (diciembre de 2021): 580–86. http://dx.doi.org/10.2144/btn-2021-0057.
Texto completoRahman, Khondaker Md Jaminur, Farzana Diba, Md Sadikur Rahman Shuvo, Mohammad Anwar Siddique, M. Anwar Hossain y Munawar Sultana. "Metagenomic investigation of bacterial community of arsenic-prone area in the northwest region of Bangladesh". Bangladesh Journal of Microbiology 39, n.º 1 (22 de enero de 2023): 31–38. http://dx.doi.org/10.3329/bjm.v39i1.64056.
Texto completoSanchez-Cid, Concepcion, Romie Tignat-Perrier, Laure Franqueville, Laurence Delaurière, Trista Schagat y Timothy M. Vogel. "Sequencing Depth Has a Stronger Effect than DNA Extraction on Soil Bacterial Richness Discovery". Biomolecules 12, n.º 3 (25 de febrero de 2022): 364. http://dx.doi.org/10.3390/biom12030364.
Texto completoKim, Jin-Wook, Young-Kyu Hong, Hyuck-Soo Kim, Eun-Ji Oh, Yong-Ha Park y Sung-Chul Kim. "Metagenomic Analysis for Evaluating Change in Bacterial Diversity in TPH-Contaminated Soil after Soil Remediation". Toxics 9, n.º 12 (24 de noviembre de 2021): 319. http://dx.doi.org/10.3390/toxics9120319.
Texto completoKangabam, Rajiv Das, Yumnam Silla, Gunajit Goswami y Madhumita Barooah. "Bacterial Operational Taxonomic Units Replace the Interactive Roles of Other Operational Taxonomic Units Under Strong Environmental Changes". Current Genomics 21, n.º 7 (22 de octubre de 2020): 512–24. http://dx.doi.org/10.2174/1389202921999200716104355.
Texto completoEaton, William D., Shadi Shokralla, Kathleen M. McGee y Mehrdad Hajibabaei. "Using metagenomics to show the efficacy of forest restoration in the New Jersey Pine Barrens". Genome 60, n.º 10 (octubre de 2017): 825–36. http://dx.doi.org/10.1139/gen-2015-0199.
Texto completoMcMahon, Matthew D., Changhui Guan, Jo Handelsman y Michael G. Thomas. "Metagenomic Analysis of Streptomyces lividans Reveals Host-Dependent Functional Expression". Applied and Environmental Microbiology 78, n.º 10 (16 de marzo de 2012): 3622–29. http://dx.doi.org/10.1128/aem.00044-12.
Texto completoAssis, Danyelle Alves Martins, Rachel Passos Rezende y João Carlos Teixeira Dias. "Use of Metagenomics and Isolation of Actinobacteria in Brazil’s Atlantic Rainforest Soil for Antimicrobial Prospecting". ISRN Biotechnology 2014 (12 de marzo de 2014): 1–7. http://dx.doi.org/10.1155/2014/909601.
Texto completoSrinivasiah, Sharath, Jacqueline Lovett, Shawn Polson, Jaysheel Bhavsar, Dhritiman Ghosh, Krishnakali Roy, Jeffry J. Fuhrmann, Mark Radosevich y K. Eric Wommack. "Direct Assessment of Viral Diversity in Soils by Random PCR Amplification of Polymorphic DNA". Applied and Environmental Microbiology 79, n.º 18 (21 de junio de 2013): 5450–57. http://dx.doi.org/10.1128/aem.00268-13.
Texto completoNelkner, Johanna, Christian Henke, Timo Wentong Lin, Wiebke Pätzold, Julia Hassa, Sebastian Jaenicke, Rita Grosch, Alfred Pühler, Alexander Sczyrba y Andreas Schlüter. "Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes". Genes 10, n.º 6 (3 de junio de 2019): 424. http://dx.doi.org/10.3390/genes10060424.
Texto completoGorman, Myranda, Ruijie Xu, Dhani Prakoso, Liliana C. M. Salvador y Sreekumari Rajeev. "Leptospira enrichment culture followed by ONT metagenomic sequencing allows better detection of Leptospira presence and diversity in water and soil samples". PLOS Neglected Tropical Diseases 16, n.º 10 (26 de octubre de 2022): e0010589. http://dx.doi.org/10.1371/journal.pntd.0010589.
Texto completoWu, Lin Hui, Jian Li Liu, Jing Zeng y Ji Zhao. "Comparison of DNA Extraction and Purification Methods from Different Soils for Metagenomic Sequencing". Advanced Materials Research 955-959 (junio de 2014): 306–9. http://dx.doi.org/10.4028/www.scientific.net/amr.955-959.306.
Texto completoOrdine, João Vitor Wagner, Gabrielle Messias de Souza, Gustavo Tamasco, Stela Virgilio, Ana Flávia Tonelli Fernandes, Rafael Silva-Rocha y María-Eugenia Guazzaroni. "Metagenomic Insights for Antimicrobial Resistance Surveillance in Soils with Different Land Uses in Brazil". Antibiotics 12, n.º 2 (5 de febrero de 2023): 334. http://dx.doi.org/10.3390/antibiotics12020334.
Texto completoForsberg, Kevin J., Sanket Patel, Evan Witt, Bin Wang, Tyler D. Ellison y Gautam Dantas. "Identification of Genes Conferring Tolerance to Lignocellulose-Derived Inhibitors by Functional Selections in Soil Metagenomes". Applied and Environmental Microbiology 82, n.º 2 (6 de noviembre de 2015): 528–37. http://dx.doi.org/10.1128/aem.02838-15.
Texto completoRiffiani, Rini, Nunik Sulistinah y Bambang Sunarko. "Gene Encoding Nitrilase from Soil Sample of Lombok Gold Mine Industry using Metagenomics Approach". KnE Life Sciences 3, n.º 4 (27 de marzo de 2017): 201. http://dx.doi.org/10.18502/kls.v3i4.705.
Texto completoDemanèche, Sandrine, Laurent Philippot, Maude M. David, Elisabeth Navarro, Timothy M. Vogel y Pascal Simonet. "Characterization of Denitrification Gene Clusters of Soil Bacteria via a Metagenomic Approach". Applied and Environmental Microbiology 75, n.º 2 (14 de noviembre de 2008): 534–37. http://dx.doi.org/10.1128/aem.01706-08.
Texto completoCzarny, Jakub, Justyna Staninska-Pięta, Jolanta Powierska-Czarny, Jacek Nowak, Łukasz Wolko y Agnieszka Piotrowska-Cyplik. "Metagenomic Analysis of Soil Bacterial Community and Level of Genes Responsible for Biodegradation of Aromatic Hydrocarbons". Polish Journal of Microbiology 66, n.º 3 (27 de septiembre de 2017): 345–52. http://dx.doi.org/10.5604/01.3001.0010.4865.
Texto completoEltokhy, Mohamed A., Bishoy T. Saad, Wafaa N. Eltayeb, Ibrahim S. Yahia, Khaled M. Aboshanab y Mohamed S. E. Ashour. "Exploring the Nature of the Antimicrobial Metabolites Produced by Paenibacillus ehimensis Soil Isolate MZ921932 Using a Metagenomic Nanopore Sequencing Coupled with LC-Mass Analysis". Antibiotics 11, n.º 1 (22 de diciembre de 2021): 12. http://dx.doi.org/10.3390/antibiotics11010012.
Texto completoLu, Xinda, Katherine R. Heal, Anitra E. Ingalls, Andrew C. Doxey y Josh D. Neufeld. "Metagenomic and chemical characterization of soil cobalamin production". ISME Journal 14, n.º 1 (6 de septiembre de 2019): 53–66. http://dx.doi.org/10.1038/s41396-019-0502-0.
Texto completoFierer, Noah, Mya Breitbart, James Nulton, Peter Salamon, Catherine Lozupone, Ryan Jones, Michael Robeson et al. "Metagenomic and Small-Subunit rRNA Analyses Reveal the Genetic Diversity of Bacteria, Archaea, Fungi, and Viruses in Soil". Applied and Environmental Microbiology 73, n.º 21 (7 de septiembre de 2007): 7059–66. http://dx.doi.org/10.1128/aem.00358-07.
Texto completoKao-Kniffin, Jenny, Sarah M. Carver y Antonio DiTommaso. "Advancing Weed Management Strategies Using Metagenomic Techniques". Weed Science 61, n.º 2 (junio de 2013): 171–84. http://dx.doi.org/10.1614/ws-d-12-00114.1.
Texto completoEhrhardt, Linda, P. Mike Günther, Manfred Böhme, J. Michael Köhler y Jialan Cao. "Three Soil Bacterial Communities from an Archaeological Excavation Site of an Ancient Coal Mine near Bennstedt (Germany) Characterized by 16S r-RNA Sequencing". Environments 9, n.º 9 (5 de septiembre de 2022): 115. http://dx.doi.org/10.3390/environments9090115.
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