Artículos de revistas sobre el tema "RNA-Seq expression levels"
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Sun, Xifang, Shiquan Sun y Sheng Yang. "An Efficient and Flexible Method for Deconvoluting Bulk RNA-Seq Data with Single-Cell RNA-Seq Data". Cells 8, n.º 10 (27 de septiembre de 2019): 1161. http://dx.doi.org/10.3390/cells8101161.
Texto completoMourão, Kira, Nicholas J. Schurch, Radek Lucoszek, Kimon Froussios, Katarzyna MacKinnon, Céline Duc, Gordon Simpson y Geoffrey J. Barton. "Detection and mitigation of spurious antisense expression with RoSA". F1000Research 8 (7 de junio de 2019): 819. http://dx.doi.org/10.12688/f1000research.18952.1.
Texto completoKwon, Taejoon. "Benchmarking Transcriptome Quantification Methods for Duplicated Genes in Xenopus laevis". Cytogenetic and Genome Research 145, n.º 3-4 (2015): 253–64. http://dx.doi.org/10.1159/000431386.
Texto completoJaffe, Andrew E., Ran Tao, Alexis L. Norris, Marc Kealhofer, Abhinav Nellore, Joo Heon Shin, Dewey Kim et al. "qSVA framework for RNA quality correction in differential expression analysis". Proceedings of the National Academy of Sciences 114, n.º 27 (20 de junio de 2017): 7130–35. http://dx.doi.org/10.1073/pnas.1617384114.
Texto completoPaşaniuc, Bogdan, Noah Zaitlen y Eran Halperin. "Accurate Estimation of Expression Levels of Homologous Genes in RNA-seq Experiments". Journal of Computational Biology 18, n.º 3 (marzo de 2011): 459–68. http://dx.doi.org/10.1089/cmb.2010.0259.
Texto completoRichard, Hugues, Marcel H. Schulz, Marc Sultan, Asja Nürnberger, Sabine Schrinner, Daniela Balzereit, Emilie Dagand et al. "Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments". Nucleic Acids Research 38, n.º 10 (11 de febrero de 2010): e112-e112. http://dx.doi.org/10.1093/nar/gkq041.
Texto completoLi, Jun y Alicia T. Lamere. "DiPhiSeq: robust comparison of expression levels on RNA-Seq data with large sample sizes". Bioinformatics 35, n.º 13 (19 de noviembre de 2018): 2235–42. http://dx.doi.org/10.1093/bioinformatics/bty952.
Texto completoRan, Di, Janhavi Moharil, James Lu, Heather Gustafson, Kerry Culm-Merdek, Kristen Strand-Tibbitts, Laura Benjamin y Marian Navratil. "Platform comparison of HTG EdgeSeq and RNA-Seq for gene expression profiling of tumor tissue specimens." Journal of Clinical Oncology 38, n.º 15_suppl (20 de mayo de 2020): 3566. http://dx.doi.org/10.1200/jco.2020.38.15_suppl.3566.
Texto completoKane, Shruti, Himanshu Garg, Neeraja M. Krishnan, Aditya Singh y Binay Panda. "RNAtor: an Android-based application for biologists to plan RNA sequencing experiments". F1000Research 6 (16 de noviembre de 2017): 997. http://dx.doi.org/10.12688/f1000research.11982.2.
Texto completoKubota, Naoto y Mikita Suyama. "Mapping of promoter usage QTL using RNA-seq data reveals their contributions to complex traits". PLOS Computational Biology 18, n.º 8 (29 de agosto de 2022): e1010436. http://dx.doi.org/10.1371/journal.pcbi.1010436.
Texto completoLaPaglia, Danielle M., Matthew R. Sapio, Peter D. Burbelo, Jean Thierry-Mieg, Danielle Thierry-Mieg, Stephen J. Raithel, Christopher E. Ramsden, Michael J. Iadarola y Andrew J. Mannes. "RNA-Seq investigations of human post-mortem trigeminal ganglia". Cephalalgia 38, n.º 5 (12 de julio de 2017): 912–32. http://dx.doi.org/10.1177/0333102417720216.
Texto completoEastman, Guillermo, Elizabeth R. Sharlow, John S. Lazo, George S. Bloom y José R. Sotelo-Silveira. "Transcriptome and Translatome Regulation of Pathogenesis in Alzheimer’s Disease Model Mice". Journal of Alzheimer's Disease 86, n.º 1 (8 de marzo de 2022): 365–86. http://dx.doi.org/10.3233/jad-215357.
Texto completoCosta, Valerio, Claudia Angelini, Italia De Feis y Alfredo Ciccodicola. "Uncovering the Complexity of Transcriptomes with RNA-Seq". Journal of Biomedicine and Biotechnology 2010 (2010): 1–19. http://dx.doi.org/10.1155/2010/853916.
Texto completoQi, Jing, Yang Zhou, Zicen Zhao y Shuilin Jin. "SDImpute: A statistical block imputation method based on cell-level and gene-level information for dropouts in single-cell RNA-seq data". PLOS Computational Biology 17, n.º 6 (17 de junio de 2021): e1009118. http://dx.doi.org/10.1371/journal.pcbi.1009118.
Texto completoLiu, Yun, Yu Tian, Ting Wu, Yun Dai, Weihong Wang y Guigen Teng. "High Expression and Clinical Significance of Elafin in Colorectal Cancer". Gastroenterology Research and Practice 2019 (9 de junio de 2019): 1–7. http://dx.doi.org/10.1155/2019/4946824.
Texto completoWANG, XI, ZHENGPENG WU y XUEGONG ZHANG. "ISOFORM ABUNDANCE INFERENCE PROVIDES A MORE ACCURATE ESTIMATION OF GENE EXPRESSION LEVELS IN RNA-SEQ". Journal of Bioinformatics and Computational Biology 08, supp01 (diciembre de 2010): 177–92. http://dx.doi.org/10.1142/s0219720010005178.
Texto completoAsakage, Masaki, Yoshihiko Usui, Naoya Nezu, Hiroyuki Shimizu, Kinya Tsubota, Kazuhiko Umazume, Naoyuki Yamakawa et al. "Comprehensive Gene Analysis of IgG4-Related Ophthalmic Disease Using RNA Sequencing". Journal of Clinical Medicine 9, n.º 11 (27 de octubre de 2020): 3458. http://dx.doi.org/10.3390/jcm9113458.
Texto completoNesline, Mary K., Sarabjot Pabla, Yong Hee Lee, Paul DePietro, Amy Early, Roger Klein, Shengle Zhang y Jeffrey Conroy. "Abstract 1259: PD-L1 expression by RNA-sequencing and survival from pembrolizumab in non-small cell lung cancer (NSCLC)". Cancer Research 82, n.º 12_Supplement (15 de junio de 2022): 1259. http://dx.doi.org/10.1158/1538-7445.am2022-1259.
Texto completoLi, Lerong y Momiao Xiong. "Dynamic Model for RNA-seq Data Analysis". BioMed Research International 2015 (2015): 1–13. http://dx.doi.org/10.1155/2015/916352.
Texto completoLiu, Wendao y Noam Shomron. "Analysis of MicroRNA Regulation and Gene Expression Variability in Single Cell Data". Journal of Personalized Medicine 12, n.º 10 (21 de octubre de 2022): 1750. http://dx.doi.org/10.3390/jpm12101750.
Texto completoReyes, J. M. y P. J. Ross. "279 CYTOPLASMIC POLYADENYLATION-REGULATED GENE EXPRESSION DURING BOVINE OOCYTE MATURATION". Reproduction, Fertility and Development 27, n.º 1 (2015): 228. http://dx.doi.org/10.1071/rdv27n1ab279.
Texto completoKyunai, Yuki M., Mika Sakamoto, Mayuko Koreishi, Yoshio Tsujino y Ayano Satoh. "Fucosyltransferase 8 (FUT8) and core fucose expression in oxidative stress response". PLOS ONE 18, n.º 2 (13 de febrero de 2023): e0281516. http://dx.doi.org/10.1371/journal.pone.0281516.
Texto completoWei, Huanhuan, Hui Lu y Hongyu Zhao. "Inferring Time-Lagged Causality Using the Derivative of Single-Cell Expression". International Journal of Molecular Sciences 23, n.º 6 (20 de marzo de 2022): 3348. http://dx.doi.org/10.3390/ijms23063348.
Texto completoMercola, Dan, Farah Rahmatpanah, Anshu Agrawal, Zhenyu (Arthur) Jia, Xiaolin Zi, Michael B. Lilly y Michael McClelland. "Immune-stimulatory gene expression in stroma cells of African-American prostate cancer tissues." Journal of Clinical Oncology 37, n.º 15_suppl (20 de mayo de 2019): e16544-e16544. http://dx.doi.org/10.1200/jco.2019.37.15_suppl.e16544.
Texto completoSchulz, Marcel H., Daniel R. Zerbino, Martin Vingron y Ewan Birney. "Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels". Bioinformatics 28, n.º 8 (24 de febrero de 2012): 1086–92. http://dx.doi.org/10.1093/bioinformatics/bts094.
Texto completoVoinsky, Irena, Yazeed Zoabi, Noam Shomron, Moria Harel, Hanoch Cassuto, Joseph Tam, Shannon Rose et al. "Blood RNA Sequencing Indicates Upregulated BATF2 and LY6E and Downregulated ISG15 and MT2A Expression in Children with Autism Spectrum Disorder". International Journal of Molecular Sciences 23, n.º 17 (30 de agosto de 2022): 9843. http://dx.doi.org/10.3390/ijms23179843.
Texto completoSuzuki, Takayuki, Yoko Ono y Hidemasa Bono. "Comparison of Oxidative and Hypoxic Stress Responsive Genes from Meta-Analysis of Public Transcriptomes". Biomedicines 9, n.º 12 (3 de diciembre de 2021): 1830. http://dx.doi.org/10.3390/biomedicines9121830.
Texto completoRahman, Rayees, Nicole Zatorski, Jens Hansen, Yuguang Xiong, J. G. Coen van Hasselt, Eric A. Sobie, Marc R. Birtwistle, Evren U. Azeloglu, Ravi Iyengar y Avner Schlessinger. "Protein structure–based gene expression signatures". Proceedings of the National Academy of Sciences 118, n.º 19 (3 de mayo de 2021): e2014866118. http://dx.doi.org/10.1073/pnas.2014866118.
Texto completoMandric, Igor, Yvette Temate-Tiagueu, Tatiana Shcheglova, Sahar Al Seesi, Alex Zelikovsky y Ion I. Măndoiu. "Fast bootstrapping-based estimation of confidence intervals of expression levels and differential expression from RNA-Seq data". Bioinformatics 33, n.º 20 (10 de junio de 2017): 3302–4. http://dx.doi.org/10.1093/bioinformatics/btx365.
Texto completoBoileau, Etienne y Christoph Dieterich. "RNA Modification Level Estimation with pulseR". Genes 9, n.º 12 (10 de diciembre de 2018): 619. http://dx.doi.org/10.3390/genes9120619.
Texto completoLiu, Yin, Sujun Chen, Su Wang, Fraser Soares, Martin Fischer, Feilong Meng, Zhou Du et al. "Transcriptional landscape of the human cell cycle". Proceedings of the National Academy of Sciences 114, n.º 13 (13 de marzo de 2017): 3473–78. http://dx.doi.org/10.1073/pnas.1617636114.
Texto completoJin, Ke, Le Ou-Yang, Xing-Ming Zhao, Hong Yan y Xiao-Fei Zhang. "scTSSR: gene expression recovery for single-cell RNA sequencing using two-side sparse self-representation". Bioinformatics 36, n.º 10 (19 de febrero de 2020): 3131–38. http://dx.doi.org/10.1093/bioinformatics/btaa108.
Texto completoKeever, Abigail L., Kathryn M. Collins, Rachel A. Clark, Amber L. Framstad y Jason W. Ashley. "RANK signaling in osteoclast precursors results in a more permissive epigenetic landscape and sexually divergent patterns of gene expression". PeerJ 11 (9 de febrero de 2023): e14814. http://dx.doi.org/10.7717/peerj.14814.
Texto completoDohn, Ryan, Bingqing Xie, Rebecca Back, Alan Selewa, Heather Eckart, Reeta Prusty Rao y Anindita Basu. "mDrop-Seq: Massively Parallel Single-Cell RNA-Seq of Saccharomyces cerevisiae and Candida albicans". Vaccines 10, n.º 1 (27 de diciembre de 2021): 30. http://dx.doi.org/10.3390/vaccines10010030.
Texto completoGalinousky, Dmitry y Tsimafei Padvitski. "Analysis of public RNA-seq data in studies of flax fiber biogenesis". EuroBiotech Journal 1, n.º 2 (9 de mayo de 2017): 177–79. http://dx.doi.org/10.24190/issn2564-615x/2017/02.10.
Texto completoSinghal, Sandeep K., Sarmad Al-Marsoummi, Emilie E. Vomhof-DeKrey, Bo Lauckner, Trysten Beyer y Marc D. Basson. "Schlafen 12 Slows TNBC Tumor Growth, Induces Luminal Markers, and Predicts Favorable Survival". Cancers 15, n.º 2 (7 de enero de 2023): 402. http://dx.doi.org/10.3390/cancers15020402.
Texto completoNg, Christopher J., Alice Liu, Sujatha Venkataraman, Katrina J. Ashworth, Christopher D. Baker, Rebecca O’Rourke, Rajeev Vibhakar, Kenneth L. Jones y Jorge Di Paola. "Single-cell transcriptional analysis of human endothelial colony-forming cells from patients with low VWF levels". Blood 139, n.º 14 (7 de abril de 2022): 2240–51. http://dx.doi.org/10.1182/blood.2021010683.
Texto completoWen, Wuwu, Haimeng Fang, Lingqi Yue, Muhammad Khalil-Ur-Rehman, Yiqi Huang, Zhaoxuan Du, Guoshun Yang y Yanshuai Xu. "RNA-Seq Based Transcriptomic Analysis of Bud Sport Skin Color in Grape Berries". Horticulturae 9, n.º 2 (15 de febrero de 2023): 260. http://dx.doi.org/10.3390/horticulturae9020260.
Texto completoLee, Bradford W., Virender B. Kumar, Pooja Biswas, Audrey C. Ko, Ramzi M. Alameddine, David B. Granet, Radha Ayyagari, Don O. Kikkawa y Bobby S. Korn. "Transcriptome Analysis of Orbital Adipose Tissue in Active Thyroid Eye Disease Using Next Generation RNA Sequencing Technology". Open Ophthalmology Journal 12, n.º 1 (16 de abril de 2018): 41–52. http://dx.doi.org/10.2174/1874364101812010041.
Texto completoRao, Guodong, Jianguo Zhang, Xiaoxia Liu, Xue Li y Chenhe Wang. "Combined Metabolome and Transcriptome Profiling Reveal Optimal Harvest Strategy Model Based on Different Production Purposes in Olive". Foods 10, n.º 2 (7 de febrero de 2021): 360. http://dx.doi.org/10.3390/foods10020360.
Texto completoLin, Zhen, Guorong Xu, Nan Deng, Christopher Taylor, Dongxiao Zhu y Erik K. Flemington. "Quantitative and Qualitative RNA-Seq-Based Evaluation of Epstein-Barr Virus Transcription in Type I Latency Burkitt's Lymphoma Cells". Journal of Virology 84, n.º 24 (13 de octubre de 2010): 13053–58. http://dx.doi.org/10.1128/jvi.01521-10.
Texto completoLee, Kwanuk, Dario Leister y Tatjana Kleine. "Arabidopsis Mitochondrial Transcription Termination Factor mTERF2 Promotes Splicing of Group IIB Introns". Cells 10, n.º 2 (3 de febrero de 2021): 315. http://dx.doi.org/10.3390/cells10020315.
Texto completoRoss, P. J. y J. L. Chitwood. "139 TRANSCRIPTOME ANALYSIS OF SINGLE BOVINE EMBRYOS BY RNA-Seq". Reproduction, Fertility and Development 24, n.º 1 (2012): 182. http://dx.doi.org/10.1071/rdv24n1ab139.
Texto completoBridges, Mary C., Joyce Nair-Menon y Antonis Kourtidis. "2041 The cell-cell adhesion component PLEKHA7 regulates the pro-tumorigenic MIR17HG long non-coding RNA in colon epithelial cells". Journal of Clinical and Translational Science 2, S1 (junio de 2018): 30. http://dx.doi.org/10.1017/cts.2018.129.
Texto completoMondal, Pronoy Kanti, Udit Surya Saha y Indranil Mukhopadhyay. "PseudoGA: cell pseudotime reconstruction based on genetic algorithm". Nucleic Acids Research 49, n.º 14 (9 de julio de 2021): 7909–24. http://dx.doi.org/10.1093/nar/gkab457.
Texto completoWu, Han y Yu Zhu. "Deconvolution of base pair level RNA-Seq read counts for quantification of transcript expression levels". Annals of Applied Statistics 10, n.º 3 (septiembre de 2016): 1195–216. http://dx.doi.org/10.1214/16-aoas906.
Texto completoRehman, Atta Ur, Abdur Rashid y Ijaz Anwar. "Single Cell RNA Sequencing (scRNA-Seq) as an Emerging Technology in Cancer Research". Proceedings of the Pakistan Academy of Sciences: B. Life and Environmental Sciences 58, n.º 3 (17 de enero de 2022): 19–28. http://dx.doi.org/10.53560/ppasb(58-3)663.
Texto completoTeixeira, Andreia Sofia, Francisco Fernandes y Alexandre P. Francisco. "SpliceTAPyR — An Efficient Method for Transcriptome Alignment". International Journal of Foundations of Computer Science 29, n.º 08 (diciembre de 2018): 1297–310. http://dx.doi.org/10.1142/s0129054118430049.
Texto completoLee, J. J., H. Y. Kang, W.-I. Lee, S. Y. Cho, Y. J. Kim y H. J. Lee. "Efflux pump gene expression study using RNA-seq in multidrug-resistant TB". International Journal of Tuberculosis and Lung Disease 25, n.º 12 (1 de diciembre de 2021): 974–81. http://dx.doi.org/10.5588/ijtld.21.0117.
Texto completoHia, Nazifa Tasnim y Sumon Ahmed. "Automatic cell type annotation using supervised classification: A systematic literature review". Systematic Literature Review and Meta-Analysis Journal 3, n.º 3 (21 de octubre de 2022): 99–108. http://dx.doi.org/10.54480/slrm.v3i3.45.
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