Literatura académica sobre el tema "Protein sequence evolution"
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Artículos de revistas sobre el tema "Protein sequence evolution"
Trifonov, Edward N. "Early Molecular Evolution". Israel Journal of Ecology and Evolution 52, n.º 3-4 (12 de abril de 2006): 375–87. http://dx.doi.org/10.1560/ijee_52_3-4_375.
Texto completoSikosek, Tobias y Hue Sun Chan. "Biophysics of protein evolution and evolutionary protein biophysics". Journal of The Royal Society Interface 11, n.º 100 (6 de noviembre de 2014): 20140419. http://dx.doi.org/10.1098/rsif.2014.0419.
Texto completoYomo, Tetsuya. "S12A2 Protein evolution from random sequence(Unifying Comprehension from Genome to Cells through Reconsideration of Protein)". Seibutsu Butsuri 47, supplement (2007): S17. http://dx.doi.org/10.2142/biophys.47.s17_3.
Texto completoChang, P. C., M. L. Hsieh, J. H. Shien, D. A. Graham, M. S. Lee y H. K. Shieh. "Complete nucleotide sequence of avian paramyxovirus type 6 isolated from ducks". Journal of General Virology 82, n.º 9 (1 de septiembre de 2001): 2157–68. http://dx.doi.org/10.1099/0022-1317-82-9-2157.
Texto completoBitard-Feildel, Tristan. "Navigating the amino acid sequence space between functional proteins using a deep learning framework". PeerJ Computer Science 7 (17 de septiembre de 2021): e684. http://dx.doi.org/10.7717/peerj-cs.684.
Texto completoChoi, I. G. y S. H. Kim. "Evolution of protein structural classes and protein sequence families". Proceedings of the National Academy of Sciences 103, n.º 38 (7 de septiembre de 2006): 14056–61. http://dx.doi.org/10.1073/pnas.0606239103.
Texto completoChen, Z., F. Wen, N. Sun y H. Zhao. "Directed evolution of homing endonuclease I-SceI with altered sequence specificity". Protein Engineering Design and Selection 22, n.º 4 (10 de enero de 2009): 249–56. http://dx.doi.org/10.1093/protein/gzp001.
Texto completoPascual-García, Alberto, Miguel Arenas y Ugo Bastolla. "The Molecular Clock in the Evolution of Protein Structures". Systematic Biology 68, n.º 6 (23 de abril de 2019): 987–1002. http://dx.doi.org/10.1093/sysbio/syz022.
Texto completoWaters, E. R. "The molecular evolution of the small heat-shock proteins in plants." Genetics 141, n.º 2 (1 de octubre de 1995): 785–95. http://dx.doi.org/10.1093/genetics/141.2.785.
Texto completoHaimel, Matthias, Karin Pröll y Michael Rebhan. "ProteinArchitect: Protein Evolution above the Sequence Level". PLoS ONE 4, n.º 7 (15 de julio de 2009): e6176. http://dx.doi.org/10.1371/journal.pone.0006176.
Texto completoTesis sobre el tema "Protein sequence evolution"
Hollich, Volker. "Orthology and protein domain architecture evolution /". Stockholm, 2006. http://diss.kib.ki.se/2006/91-7140-783-9/.
Texto completoKosiol, Carolin. "Markov models for protein sequence evolution". Thesis, University of Cambridge, 2006. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.614166.
Texto completoWarnecke, Tobias. "Determinants of coding sequence evolution- beyong protein function". Thesis, University of Bath, 2010. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.531341.
Texto completoGuney, Tacettin Dogacan. "Prediction Of Protein-protein Interactions From Sequence Using Evolutionary Relations Of Proteins And Species". Master's thesis, METU, 2009. http://etd.lib.metu.edu.tr/upload/12611058/index.pdf.
Texto completos phylogenetic profile because the co-evolutionary pressure hypothesis suggests that proteins with similar phylogenetic profiles are likely to interact. We also divide phylogenetic profile into smaller profiles based on the evolutionary lines. These divided profiles are then used to score the similarity between all possible protein pairs. Since not all profile groups have the same number of elements, it is a difficult task to assess the similarity between such pairs. We show that many commonly used measures do not work well and that the end result greatly depends on the type of the similarity measure used. We also introduce a novel similarity measure. The resulting dense putative interaction network contains many false-positive interactions, therefore we apply the Markov Clustering algorithm to cluster the protein-protein interaction network and filter out the weaker edges. The end result is a set of clusters where proteins within the clusters are likely to be functionally linked and to interact. While this method does not perform as well as supervised methods, it has the advantage of not requiring a training set and being able to work only using sequence data and evolutionary information. So it can be used as a first step in identifying protein-protein interactions in newly-sequenced organisms.
Davies, L. "Sequence database searching using structural models of protein evolution". Thesis, University of Cambridge, 2002. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.598371.
Texto completoWistrand, Markus. "Hidden Markov models for remote protein homology detection /". Stockholm, 2005. http://diss.kib.ki.se/2006/91-7140-598-4/.
Texto completoNordesjö, Olle. "Searching for novel protein-protein specificities using a combined approach of sequence co-evolution and local structural equilibration". Thesis, Uppsala universitet, Institutionen för biologisk grundutbildning, 2016. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-275040.
Texto completoHöglund, Pär J. "Identification, Characterization and Evolution of Membrane-bound Proteins /". Uppsala : Acta Universitatis Upsaliensis Acta Universitatis Upsaliensis, 2008. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-9329.
Texto completoDubey, Anshul. "Search and Analysis of the Sequence Space of a Protein Using Computational Tools". Diss., Georgia Institute of Technology, 2006. http://hdl.handle.net/1853/14115.
Texto completoRandall, Ryan Nicole. "Experimental phylogenetics: a benchmark for ancestral sequence reconstruction". Thesis, Georgia Institute of Technology, 2012. http://hdl.handle.net/1853/48998.
Texto completoLibros sobre el tema "Protein sequence evolution"
Lorne Conference on Protein Structure & Function (28th 2003). 28th Annual Lorne Conference on Protein Structure & Function: Sun. 9 - Thurs. 13 February 2003. [Lorne, Vic: s.n., 2003.
Buscar texto completoM, Stone Edwin y Schwartz Robert J, eds. Intervening sequences in evolution and development. New York: Oxford University Press, 1990.
Buscar texto completoEasteal, Simon. The mammalian molecular clock. New York: Springer-Verlag, 1995.
Buscar texto completo1955-, Collet Chris y Betty David 1953-, eds. The mammalian molecular clock. New York: Springer-Verlag, 1995.
Buscar texto completoAbelson, John N., Melvin I. Simon y Russell F. Doolittle. Molecular Evolution: Computer Analysis of Protein and Nucleic Acid Sequences. Elsevier Science & Technology Books, 1990.
Buscar texto completo(Editor), John N. Abelson, Melvin I. Simon (Editor) y Russell F. Doolittle (Editor), eds. Molecular Evolution: Computer Analysis of Protein and Nucleic Acid Sequences, Volume 183: Volume 183: Molecular Evolution (Methods in Enzymology). Academic Press, 1990.
Buscar texto completo(Editor), John N. Abelson, Melvin I. Simon (Editor) y Russell F. Doolittle (Editor), eds. Molecular Evolution: Computer Analysis of Protein and Nucleic Acid Sequences, Volume 183: Volume 183: Molecular Evolution (Methods in Enzymology). Academic Press, 1990.
Buscar texto completoCapítulos de libros sobre el tema "Protein sequence evolution"
Koonin, Eugene V. y Michael Y. Galperin. "Genomes and the Protein Universe". En Sequence — Evolution — Function, 357–69. Boston, MA: Springer US, 2003. http://dx.doi.org/10.1007/978-1-4757-3783-7_9.
Texto completoDokholyan, Nikolay V. y Eugene I. Shakhnovich. "Towards Unifying Protein Evolution Theory". En Structural Approaches to Sequence Evolution, 113–26. Berlin, Heidelberg: Springer Berlin Heidelberg, 2007. http://dx.doi.org/10.1007/978-3-540-35306-5_5.
Texto completoJörnvall, Hans, Olle Danielsson, Jan-Olov Höög y Bengt Persson. "Alcohol Dehydrogenases: Patterns of Protein Evolution". En Methods in Protein Sequence Analysis, 275–82. Boston, MA: Springer US, 1993. http://dx.doi.org/10.1007/978-1-4899-1603-7_36.
Texto completoBastolla, Ugo, Markus Porto, H. Eduardo Roman y Michele Vendruscolo. "The Structurally Constrained Neutral Model of Protein Evolution". En Structural Approaches to Sequence Evolution, 75–112. Berlin, Heidelberg: Springer Berlin Heidelberg, 2007. http://dx.doi.org/10.1007/978-3-540-35306-5_4.
Texto completoWakabayashi, Steven T., Maksim A. Shlykov, Ujjwal Kumar, Vamsee S. Reddy, Ankur Malhotra, Erik L. Clarke, Jonathan S. Chen et al. "Deducing Transport Protein Evolution Based on Sequence, Structure, and Function". En Protein Families, 315–39. Hoboken, NJ, USA: John Wiley & Sons, Inc., 2013. http://dx.doi.org/10.1002/9781118743089.ch12.
Texto completoGu, Xun. "Functional divergence in protein (family) sequence evolution". En Contemporary Issues in Genetics and Evolution, 133–41. Dordrecht: Springer Netherlands, 2003. http://dx.doi.org/10.1007/978-94-010-0229-5_4.
Texto completoRobey, Frank A. "The Evolution of the Regulatory Response to Products of Recombinant DNA Technology". En Methods in Protein Sequence Analysis · 1986, 67–78. Totowa, NJ: Humana Press, 1987. http://dx.doi.org/10.1007/978-1-59259-480-1_5.
Texto completoKocher, Thomas D. y Allan C. Wilson. "Sequence Evolution of Mitochondrial DNA in Humans and Chimpanzees: Control Region and a Protein-Coding Region". En Evolution of Life, 391–413. Tokyo: Springer Japan, 1991. http://dx.doi.org/10.1007/978-4-431-68302-5_25.
Texto completoBastolla, Ugo y Miguel Arenas. "The Influence of Protein Stability on Sequence Evolution: Applications to Phylogenetic Inference". En Methods in Molecular Biology, 215–31. New York, NY: Springer New York, 2018. http://dx.doi.org/10.1007/978-1-4939-8736-8_11.
Texto completoVanAntwerp, James, Patrick Finneran, Benedikt Dolgikh y Daniel Woldring. "Ancestral Sequence Reconstruction and Alternate Amino Acid States Guide Protein Library Design for Directed Evolution". En Methods in Molecular Biology, 75–86. New York, NY: Springer US, 2022. http://dx.doi.org/10.1007/978-1-0716-2285-8_4.
Texto completoActas de conferencias sobre el tema "Protein sequence evolution"
Shovan, S. M. y Md Al Mehedi Hasan. "Prediction of Lysine Glycation PTM site in Protein using Peptide Sequence Evolution based Features". En 2019 International Conference on Electrical, Computer and Communication Engineering (ECCE). IEEE, 2019. http://dx.doi.org/10.1109/ecace.2019.8679407.
Texto completoKokilam, K. Vasantha y D. Pon Mary Pushpa Latha. "A review on evolution of data mining techniques for protein sequence causing genetic disorder diseases". En 2012 IEEE International Conference on Computational Intelligence and Computing Research (ICCIC). IEEE, 2012. http://dx.doi.org/10.1109/iccic.2012.6510284.
Texto completoSadler, J. Evan. "THE MOLECULAR BIOLOGY OF VON WILLEBRAND FACTOR". En XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1643930.
Texto completoRadolf, Justin, Sanjiv Kumar, David Smajs, Abhishek Dey, Arvind Anand, Morgan Ledoyt, Carson Karanian et al. "LB1.1 Insights into the evolution of syphilis spirochetes within at-risk populations: sequence variation of outer membrane protein β-barrel domains in clinical samples". En STI and HIV World Congress Abstracts, July 9–12 2017, Rio de Janeiro, Brazil. BMJ Publishing Group Ltd, 2017. http://dx.doi.org/10.1136/sextrans-2017-053264.102.
Texto completoPannekoek, H., M. Linders, J. Keijer, H. Veerman, H. Van Heerikhuizen y D. J. Loskutoff. "THE STRUCTURE OF THE HUMAN ENDOTHELIAL PLASMINOGEN ACTIVATOR INHIBITOR (PAI-1) GENE: NON-RANDOM POSITIONING OF INTRONS". En XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1644767.
Texto completoSCHÜTTE, MORITZ, NIELS KLITGORD, DANIEL SEGRÈ y OLIVER EBENHÖH. "CO-EVOLUTION OF METABOLISM AND PROTEIN SEQUENCES". En Proceedings of the 9th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2009). IMPERIAL COLLEGE PRESS, 2010. http://dx.doi.org/10.1142/9781848165786_0013.
Texto completoKuznetsov, Vladimir A. "Stochastic Model of Evolution of Conserved Protein Coding Sequences". En UNSOLVED PROBLEMS OF NOISE AND FLUCTUATIONS: UPoN 2002: Third International Conference on Unsolved Problems of Noise and Fluctuations in Physics, Biology, and High Technology. AIP, 2003. http://dx.doi.org/10.1063/1.1584911.
Texto completoGiannelli, B. F. "MOLECULAR GENETICS OF HAEMOPHILIA". En XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1643981.
Texto completoGoode, Matthew, Stéphane Guindon y Allen Rodrigo. "Modelling the evolution of protein coding sequences sampled from Measurably Evolving Populations". En Proceedings of the 19th International Conference. IMPERIAL COLLEGE PRESS, 2008. http://dx.doi.org/10.1142/9781848163324_0013.
Texto completoStrandberg, L., D. Lawrence y T. Ny. "ISOLATION OF THE GENOMIC REGION CODING FOR TYPE-1 PLASMINOGEN ACTIVATOR INHIBITOR". En XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1644439.
Texto completoInformes sobre el tema "Protein sequence evolution"
Izhar, Shamay, Maureen Hanson y Nurit Firon. Expression of the Mitochondrial Locus Associated with Cytoplasmic Male Sterility in Petunia. United States Department of Agriculture, febrero de 1996. http://dx.doi.org/10.32747/1996.7604933.bard.
Texto completoEyal, Yoram y Sheila McCormick. Molecular Mechanisms of Pollen-Pistil Interactions in Interspecific Crossing Barriers in the Tomato Family. United States Department of Agriculture, mayo de 2000. http://dx.doi.org/10.32747/2000.7573076.bard.
Texto completoRafaeli, Ada, Russell Jurenka y Chris Sander. Molecular characterisation of PBAN-receptors: a basis for the development and screening of antagonists against Pheromone biosynthesis in moth pest species. United States Department of Agriculture, enero de 2008. http://dx.doi.org/10.32747/2008.7695862.bard.
Texto completoMawassi, Munir y Valerian Dolja. Role of RNA Silencing Suppression in the Pathogenicity and Host Specificity of the Grapevine Virus A. United States Department of Agriculture, enero de 2010. http://dx.doi.org/10.32747/2010.7592114.bard.
Texto completoPerk, Shimon, Maricarmen Garcia, Alexander Panshin, Caroline Banet-Noach, Irina Gissin, Mark W. Jackwood y David Stallknecht. Avian Influenza Virus H9N2: Characterization and Control Strategies. United States Department of Agriculture, junio de 2007. http://dx.doi.org/10.32747/2007.7709882.bard.
Texto completoFahima, Tzion y Jorge Dubcovsky. Map-based cloning of the novel stripe rust resistance gene YrG303 and its use to engineer 1B chromosome with multiple beneficial traits. United States Department of Agriculture, enero de 2013. http://dx.doi.org/10.32747/2013.7598147.bard.
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