Artículos de revistas sobre el tema "Immunopeptidomics"
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Ternette, Nicola y Anthony W. Purcell. "Immunopeptidomics Special Issue". PROTEOMICS 18, n.º 12 (junio de 2018): 1800145. http://dx.doi.org/10.1002/pmic.201800145.
Texto completoShapiro, Ilja E., Marco Tognetti, Tikira Temu, Oliver M. Bernhardt, Daniel Redfern, Yuehan Feng, Roland Bruderer y Lukas Reiter. "Abstract 5376: Quantitative profiling of HLA class I and class II antigens and neoantigens in tissue biopsy and PBMC samples using an optimized mass spectrometry-based workflow". Cancer Research 84, n.º 6_Supplement (22 de marzo de 2024): 5376. http://dx.doi.org/10.1158/1538-7445.am2024-5376.
Texto completoMayer, Rupert L. y Karl Mechtler. "Immunopeptidomics in the Era of Single-Cell Proteomics". Biology 12, n.º 12 (12 de diciembre de 2023): 1514. http://dx.doi.org/10.3390/biology12121514.
Texto completoConnelley, Timothy, Annalisa Nicastri, Tara Sheldrake, Christina Vrettou, Andressa Fisch, Birkir Reynisson, Soren Buus et al. "Immunopeptidomic Analysis of BoLA-I and BoLA-DR Presented Peptides from Theileria parva Infected Cells". Vaccines 10, n.º 11 (11 de noviembre de 2022): 1907. http://dx.doi.org/10.3390/vaccines10111907.
Texto completoChong, Chloe, George Coukos y Michal Bassani-Sternberg. "Identification of tumor antigens with immunopeptidomics". Nature Biotechnology 40, n.º 2 (11 de octubre de 2021): 175–88. http://dx.doi.org/10.1038/s41587-021-01038-8.
Texto completoMellacheruvu, Dattatreya, Rachel Pyke, Charles Abbott, Nick Phillips, Sejal Desai, Rena McClory, John West, Richard Chen y Sean Boyle. "57 Precision neoantigen discovery using novel algorithms and expanded HLA-ligandome datasets". Journal for ImmunoTherapy of Cancer 8, Suppl 3 (noviembre de 2020): A62. http://dx.doi.org/10.1136/jitc-2020-sitc2020.0057.
Texto completoFoster, Leonard, Queenie Chan, Charlie Kuan y Hong Bing Yu. "A framework for unbiased, robust and system-wide characterization of MHC-bound peptides and epitopes (APP5P.111)". Journal of Immunology 194, n.º 1_Supplement (1 de mayo de 2015): 183.13. http://dx.doi.org/10.4049/jimmunol.194.supp.183.13.
Texto completoKochin, Vitaly, Takayuki Kanaseki, Sho Miyamoto, Daichi Morooka, Keigo Moniwa, Yutaro Ikeuchi, Akari Takaya, Yoshihiko Hirohashi, Toshihiko Torigoe y Noriyuki Sato. "Human cancer immunopeptidomics for efficient CTL immunotherapy". Annals of Oncology 26 (noviembre de 2015): vii30. http://dx.doi.org/10.1093/annonc/mdv424.02.
Texto completoIstrail, S., L. Florea, B. V. Halldorsson, O. Kohlbacher, R. S. Schwartz, V. B. Yap, J. W. Yewdell y S. L. Hoffman. "Comparative immunopeptidomics of humans and their pathogens". Proceedings of the National Academy of Sciences 101, n.º 36 (23 de agosto de 2004): 13268–72. http://dx.doi.org/10.1073/pnas.0404740101.
Texto completoGarcia‐Moure, Marc, Andrew G. Gillard, Marta M. Alonso, Juan Fueyo y Candelaria Gomez‐Manzano. "Oncolytic adenoviruses and immunopeptidomics: a convenient marriage". Molecular Oncology 18, n.º 4 (abril de 2024): 781–84. http://dx.doi.org/10.1002/1878-0261.13648.
Texto completoTegeler, Christian M., Jonas S. Heitmann, Helmut R. Salih, Juliane S. Walz y Annika Nelde. "Abstract 1972: Clinical implications of HLA expression and immunopeptidome-presented tumor antigens in ovarian carcinoma". Cancer Research 82, n.º 12_Supplement (15 de junio de 2022): 1972. http://dx.doi.org/10.1158/1538-7445.am2022-1972.
Texto completoZhang, Bing y Michal Bassani-Sternberg. "Current perspectives on mass spectrometry-based immunopeptidomics: the computational angle to tumor antigen discovery". Journal for ImmunoTherapy of Cancer 11, n.º 10 (octubre de 2023): e007073. http://dx.doi.org/10.1136/jitc-2023-007073.
Texto completoDanner, Rebecca, Michael Pereckas, Joseph Rouse, Amanda Wahhab y Robert B. Lochhead. "Expanded presentation of Lyme autoantigens and identification of a novel immunogenic CD4+ T cell epitope from Borrelia burgdorferiMCP4 in murine Lyme arthritis". Journal of Immunology 210, n.º 1_Supplement (1 de mayo de 2023): 221.17. http://dx.doi.org/10.4049/jimmunol.210.supp.221.17.
Texto completoBichmann, Leon, Annika Nelde, Michael Ghosh, Lukas Heumos, Christopher Mohr, Alexander Peltzer, Leon Kuchenbecker et al. "MHCquant: Automated and Reproducible Data Analysis for Immunopeptidomics". Journal of Proteome Research 18, n.º 11 (7 de octubre de 2019): 3876–84. http://dx.doi.org/10.1021/acs.jproteome.9b00313.
Texto completoChavda, Vivek P. y Elrashdy M. Redwan. "SARS-CoV-2: Immunopeptidomics and Other Immunological Studies". Vaccines 10, n.º 11 (21 de noviembre de 2022): 1975. http://dx.doi.org/10.3390/vaccines10111975.
Texto completoCourcelles, Mathieu, Chantal Durette, Tariq Daouda, Jean-Philippe Laverdure, Krystel Vincent, Sébastien Lemieux, Claude Perreault y Pierre Thibault. "MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses". Journal of Proteome Research 19, n.º 4 (28 de febrero de 2020): 1873–81. http://dx.doi.org/10.1021/acs.jproteome.9b00859.
Texto completoBouzid, Rachid, Monique T. A. de Beijer, Robbie J. Luijten, Karel Bezstarosti, Amy L. Kessler, Marco J. Bruno, Maikel P. Peppelenbosch, Jeroen A. A. Demmers y Sonja I. Buschow. "Empirical Evaluation of the Use of Computational HLA Binding as an Early Filter to the Mass Spectrometry-Based Epitope Discovery Workflow". Cancers 13, n.º 10 (12 de mayo de 2021): 2307. http://dx.doi.org/10.3390/cancers13102307.
Texto completoThibault, Pierre y Claude Perreault. "Immunopeptidomics: Reading the Immune Signal That Defines Self From Nonself". Molecular & Cellular Proteomics 21, n.º 6 (junio de 2022): 100234. http://dx.doi.org/10.1016/j.mcpro.2022.100234.
Texto completoPurcell, Anthony W., Sri H. Ramarathinam y Nicola Ternette. "Mass spectrometry–based identification of MHC-bound peptides for immunopeptidomics". Nature Protocols 14, n.º 6 (15 de mayo de 2019): 1687–707. http://dx.doi.org/10.1038/s41596-019-0133-y.
Texto completoDanner, Rebecca, Michael Pereckas, Joseph Rouse, Amanda Wahhab y Robert Lochhead. "Immunopeptidomics analysis of Lyme arthritis: insights into infection and autoimmunity". Journal of Immunology 206, n.º 1_Supplement (1 de mayo de 2021): 93.10. http://dx.doi.org/10.4049/jimmunol.206.supp.93.10.
Texto completoShapiro, Ilja E. y Michal Bassani-Sternberg. "The impact of immunopeptidomics: From basic research to clinical implementation". Seminars in Immunology 66 (marzo de 2023): 101727. http://dx.doi.org/10.1016/j.smim.2023.101727.
Texto completoFaridi, Pouya, Anthony W. Purcell y Nathan Paul Croft. "In Immunopeptidomics We Need a Sniper Instead of a Shotgun". PROTEOMICS 18, n.º 12 (7 de marzo de 2018): 1700464. http://dx.doi.org/10.1002/pmic.201700464.
Texto completoLi, Kai, Antrix Jain, Anna Malovannaya, Bo Wen y Bing Zhang. "DeepRescore: Leveraging Deep Learning to Improve Peptide Identification in Immunopeptidomics". PROTEOMICS 20, n.º 21-22 (27 de septiembre de 2020): 1900334. http://dx.doi.org/10.1002/pmic.201900334.
Texto completoVaughan, Kerrie, Etienne Caron, Bjoern Peters y Alessandro Sette. "The future of the immunopeptidome in health and disease: a comprehensive analysis of naturally processed ligand data". Journal of Immunology 196, n.º 1_Supplement (1 de mayo de 2016): 46.4. http://dx.doi.org/10.4049/jimmunol.196.supp.46.4.
Texto completoPeltonen, Karita, Sara Feola, Husen M. Umer, Jacopo Chiaro, Georgios Mermelekas, Erkko Ylösmäki, Sari Pesonen, Rui M. M. Branca, Janne Lehtiö y Vincenzo Cerullo. "Therapeutic Cancer Vaccination with Immunopeptidomics-Discovered Antigens Confers Protective Antitumor Efficacy". Cancers 13, n.º 14 (7 de julio de 2021): 3408. http://dx.doi.org/10.3390/cancers13143408.
Texto completoShabani, Nor Raihan Mohammad, Che Muhammad Khairul Hisyam Ismail, Chiuan Herng Leow, Munirah Mokhtar, Kirnpal Kaur Banga Singh y Chiuan Yee Leow. "Identification of MHC Class II Immunopeptidomes from Shigella flexneri 2a-infected Macrophages as Potential Vaccine Candidates". Indonesian Biomedical Journal 14, n.º 2 (28 de junio de 2022): 139–47. http://dx.doi.org/10.18585/inabj.v14i2.1781.
Texto completoAbd El-Baky, Nawal, Amro A. Amara y Elrashdy M. Redwan. "HLA-I and HLA-II Peptidomes of SARS-CoV-2: A Review". Vaccines 11, n.º 3 (25 de febrero de 2023): 548. http://dx.doi.org/10.3390/vaccines11030548.
Texto completoKallor, Ashwin Adrian, Michał Waleron, Georges Bedran, Patrícia Eugénio, Catia Pesquita, Daniel Faria, Fabio Massimo Zanzotto, Christophe Battail, Ajitha Rajan y Javier Alfaro. "Abstract 6577: CARMEN: A pan-HLA and pan-cancer proteogenomic database on antigen presentation to support cancer immunotherapy". Cancer Research 83, n.º 7_Supplement (4 de abril de 2023): 6577. http://dx.doi.org/10.1158/1538-7445.am2023-6577.
Texto completoKlein, Joshua, Daniel Sprague, Monica Lane, Meghan Hart, Olivia Petrillo, Italo Faria do Valle, Matthew Davis et al. "Abstract 904: AI platform provides an EDGE and enables state-of-the-art identification of peptide-HLAs for the development of T cell inducing vaccines". Cancer Research 84, n.º 6_Supplement (22 de marzo de 2024): 904. http://dx.doi.org/10.1158/1538-7445.am2024-904.
Texto completoStopfer, Lauren E., Jason E. Conage-Pough y Forest M. White. "Quantitative Consequences of Protein Carriers in Immunopeptidomics and Tyrosine Phosphorylation MS2 Analyses". Molecular & Cellular Proteomics 20 (2021): 100104. http://dx.doi.org/10.1016/j.mcpro.2021.100104.
Texto completoFritsche, Jens, Barbara Rakitsch, Franziska Hoffgaard, Michael Römer, Heiko Schuster, Daniel J. Kowalewski, Martin Priemer et al. "Translating Immunopeptidomics to Immunotherapy-Decision-Making for Patient and Personalized Target Selection". PROTEOMICS 18, n.º 12 (10 de abril de 2018): 1700284. http://dx.doi.org/10.1002/pmic.201700284.
Texto completoLi, Kai, Antrix Jain, Anna Malovannaya, Bo Wen y Bing Zhang. "Front Cover: DeepRescore: Leveraging Deep Learning to Improve Peptide Identification in Immunopeptidomics". PROTEOMICS 20, n.º 21-22 (noviembre de 2020): 2070151. http://dx.doi.org/10.1002/pmic.202070151.
Texto completoPurcell, Anthony. "Mass spectrometry and immunopeptidomics – teaching us new lessons in antigen processing and presentation". Molecular Immunology 150 (octubre de 2022): 35. http://dx.doi.org/10.1016/j.molimm.2022.05.116.
Texto completoAbelin, Jennifer. "Abstract 1439 Mass spectrometry based immunopeptidomics as a tool for understanding antigen presentation". Journal of Biological Chemistry 300, n.º 3 (marzo de 2024): 106634. http://dx.doi.org/10.1016/j.jbc.2024.106634.
Texto completoMohsen, Mona O., Daniel E. Speiser, Justine Michaux, HuiSong Pak, Brian J. Stevenson, Monique Vogel, Varghese Philipose Inchakalody et al. "Bedside formulation of a personalized multi-neoantigen vaccine against mammary carcinoma". Journal for ImmunoTherapy of Cancer 10, n.º 1 (enero de 2022): e002927. http://dx.doi.org/10.1136/jitc-2021-002927.
Texto completoWilder, Brandon Keith, Luna de Lacerda, Camila R. R. Barbosa, Maya Aleshnick, Thomas Martinson, David Morrow, Zeshou Zhao, Gaurav Gaiha y Caroline Junqueira. "Malaria antigens are presented to CD8 T cells via the non-classical HLA-E". Journal of Immunology 208, n.º 1_Supplement (1 de mayo de 2022): 170.27. http://dx.doi.org/10.4049/jimmunol.208.supp.170.27.
Texto completoMaringer, Yacine, Lena Freudenmann, Annika Nelde, Jonas S. Heitmann, Helmut R. Salih, Marissa Dubbelaar, Jörg Hennenlotter et al. "Abstract 3556: Immunopeptidomics-guided tumor antigen warehouse design and first clinical application of a personalized peptide vaccine for prostate cancer". Cancer Research 82, n.º 12_Supplement (15 de junio de 2022): 3556. http://dx.doi.org/10.1158/1538-7445.am2022-3556.
Texto completoSolleder, Marthe, Philippe Guillaume, Julien Racle, Justine Michaux, Hui-Song Pak, Markus Müller, George Coukos, Michal Bassani-Sternberg y David Gfeller. "Mass Spectrometry Based Immunopeptidomics Leads to Robust Predictions of Phosphorylated HLA Class I Ligands". Molecular & Cellular Proteomics 19, n.º 2 (17 de diciembre de 2019): 390–404. http://dx.doi.org/10.1074/mcp.tir119.001641.
Texto completoAndreatta, Massimo, Annalisa Nicastri, Xu Peng, Gemma Hancock, Lucy Dorrell, Nicola Ternette y Morten Nielsen. "MS-Rescue: A Computational Pipeline to Increase the Quality and Yield of Immunopeptidomics Experiments". PROTEOMICS 19, n.º 4 (18 de enero de 2019): 1800357. http://dx.doi.org/10.1002/pmic.201800357.
Texto completoFritsche, Jens, Barbara Rakitsch, Franziska Hoffgaard, Michael Römer, Heiko Schuster, Daniel J. Kowalewski, Martin Priemer et al. "Front Cover: Translating Immunopeptidomics to Immunotherapy-Decision-Making for Patient and Personalized Target Selection". PROTEOMICS 18, n.º 12 (junio de 2018): 1870101. http://dx.doi.org/10.1002/pmic.201870101.
Texto completoStutzmann, Charlotte, Jiaxi Peng, Zhaoguan Wu, Christopher Savoie, Isabelle Sirois, Pierre Thibault, Aaron R. Wheeler y Etienne Caron. "Unlocking the potential of microfluidics in mass spectrometry-based immunopeptidomics for tumor antigen discovery". Cell Reports Methods 3, n.º 6 (junio de 2023): 100511. http://dx.doi.org/10.1016/j.crmeth.2023.100511.
Texto completoTetens, Ashley R., Allison M. Martin, Antje Arnold, Orlandi V. Novak, Adrian Idrizi, Rakel Tryggvadottir, Jordyn Craig-Schwartz et al. "DIPG-58. TARGETING DISORDERED DNA METHYLATION IN DIPG TO CONSTRAIN VARIABILITY AND INDUCE IMMUNE SIGNALING". Neuro-Oncology 26, Supplement_4 (18 de junio de 2024): 0. http://dx.doi.org/10.1093/neuonc/noae064.111.
Texto completoPyke, Rachel Marty, Steven Dea, Hima Anbunathan, Charles W. Abbott, Neeraja Ravi, Jason Harris, Gabor Bartha et al. "Abstract 5640: Mono-allelic immunopeptidomics data from 109 MHC-I alleles reveals variability in binding preferences and improves neoantigen prediction algorithm". Cancer Research 82, n.º 12_Supplement (15 de junio de 2022): 5640. http://dx.doi.org/10.1158/1538-7445.am2022-5640.
Texto completoLi, Chen, Jerico Revote, Sri H. Ramarathinam, Shan Zou Chung, Nathan P. Croft, Katherine E. Scull, Ziyi Huang et al. "Resourcing, annotating, and analysing synthetic peptides of SARS‐CoV‐2 for immunopeptidomics and other immunological studies". PROTEOMICS 21, n.º 17-18 (14 de abril de 2021): 2100036. http://dx.doi.org/10.1002/pmic.202100036.
Texto completoGraciotti, Michele, Fabio Marino, HuiSong Pak, Petra Baumgaertner, Anne-Christine Thierry, Johanna Chiffelle, Marta A. S. Perez et al. "Deciphering the Mechanisms of Improved Immunogenicity of Hypochlorous Acid-Treated Antigens in Anti-Cancer Dendritic Cell-Based Vaccines". Vaccines 8, n.º 2 (2 de junio de 2020): 271. http://dx.doi.org/10.3390/vaccines8020271.
Texto completoStopfer, L. E., A. D. D'Souza y F. M. White. "1,2,3, MHC: a review of mass-spectrometry-based immunopeptidomics methods for relative and absolute quantification of pMHCs". Immuno-Oncology and Technology 11 (octubre de 2021): 100042. http://dx.doi.org/10.1016/j.iotech.2021.100042.
Texto completoStopfer, L. E., A. D. D'Souza y F. M. White. "1,2,3, MHC: a review of mass-spectrometry-based immunopeptidomics methods for relative and absolute quantification of pMHCs". Immuno-Oncology and Technology 11 (octubre de 2021): 100042. http://dx.doi.org/10.1016/j.iotech.2021.100042.
Texto completoEly, Zackery A., William A. Freed-Pastor, Zachary J. Kulstad, Jennifer G. Abelin, Eva Verzani, Kevin S. Kapner, Susan Klaeger et al. "Abstract C014: Broadening the repertoire of PDAC-specific targets for immune-based therapy through high-resolution immunopeptidomics". Cancer Research 82, n.º 22_Supplement (15 de noviembre de 2022): C014. http://dx.doi.org/10.1158/1538-7445.panca22-c014.
Texto completoElAbd, Hesham, Frauke Degenhardt, Tomas Koudelka, Ann-Kristin Kamps, Andreas Tholey, Petra Bacher, Tobias L. Lenz, Andre Franke y Mareike Wendorff. "Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data". BMC Bioinformatics 22, n.º 1 (17 de agosto de 2021). http://dx.doi.org/10.1186/s12859-021-04315-0.
Texto completoWacker, Marcel, Jens Bauer, Laura Wessling, Marissa Dubbelaar, Annika Nelde, Hans-Georg Rammensee y Juliane S. Walz. "Immunoprecipitation methods impact the peptide repertoire in immunopeptidomics". Frontiers in Immunology 14 (21 de julio de 2023). http://dx.doi.org/10.3389/fimmu.2023.1219720.
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