Literatura académica sobre el tema "Genomics"
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Artículos de revistas sobre el tema "Genomics"
Tang, Lin. "Genomics beyond complete genomes". Nature Methods 19, n.º 1 (enero de 2022): 29. http://dx.doi.org/10.1038/s41592-021-01374-2.
Texto completoHedges, S. B. "GENOMICS: Vertebrate Genomes Compared". Science 297, n.º 5585 (23 de agosto de 2002): 1283b—1285. http://dx.doi.org/10.1126/science.1076231.
Texto completoKeller, Evelyn Fox. "Genes, Genomes, and Genomics". Biological Theory 6, n.º 2 (junio de 2011): 132–40. http://dx.doi.org/10.1007/s13752-012-0014-x.
Texto completoKaram, Jose A., Shahrokh F. Shariat, Jer-Tsong Hsieh y Margaret A. Knowles. "Genomics: a preview of genomic medicine". BJU International 102, n.º 9b (noviembre de 2008): 1221–27. http://dx.doi.org/10.1111/j.1464-410x.2008.07963.x.
Texto completoLazaridis, Konstantinos N. y Gloria M. Petersen. "Genomics, genetic epidemiology, and genomic medicine". Clinical Gastroenterology and Hepatology 3, n.º 4 (abril de 2005): 320–28. http://dx.doi.org/10.1016/s1542-3565(05)00085-6.
Texto completoHollander, Rachelle D. "Social genomics: Genomic inventions in society". Science and Engineering Ethics 8, n.º 4 (diciembre de 2002): 485–96. http://dx.doi.org/10.1007/s11948-002-0002-9.
Texto completoWhitley, Kiara V., Josie A. Tueller y K. Scott Weber. "Genomics Education in the Era of Personal Genomics: Academic, Professional, and Public Considerations". International Journal of Molecular Sciences 21, n.º 3 (24 de enero de 2020): 768. http://dx.doi.org/10.3390/ijms21030768.
Texto completoGurwitz, David y Yael Bregman-Eschet. "Personal genomics services: whose genomes?" European Journal of Human Genetics 17, n.º 7 (4 de marzo de 2009): 883–89. http://dx.doi.org/10.1038/ejhg.2008.254.
Texto completoEndy, D. "GENOMICS: Reconstruction of the Genomes". Science 319, n.º 5867 (29 de febrero de 2008): 1196–97. http://dx.doi.org/10.1126/science.1155749.
Texto completoDiRita, V. J. "GENOMICS: Genomics Happens". Science 289, n.º 5484 (1 de septiembre de 2000): 1488–89. http://dx.doi.org/10.1126/science.289.5484.1488.
Texto completoTesis sobre el tema "Genomics"
Batzoglou, Serafim. "Computational genomics : mapping, comparison, and annotation of genomes". Thesis, Massachusetts Institute of Technology, 2000. http://hdl.handle.net/1721.1/8629.
Texto completoIncludes bibliographical references (leaves 180-191).
The field of genomics provides many challenges to computer scientists and mathematicians. The area of computational genomics has been expanding recently, and the timely application of computer science in this field is proving to be an essential component of the large international effort in genomics. In this thesis we address key issues in the different stages of genome research: planning of a genome sequencing project, obtaining and assembling sequence information, and ultimately study, cross-species comparison, and annotation of finished genomic sequence. We present applications of computational techniques to the above areas: (1) In relation to the early stages of a genome project, we address physical mapping, and we present results on the theoretical problem of finding minimum superstrings of hypergraphs, a combinatorial problem motivated by physical mapping. We also present a statistical and simulation study of "walking with clone-end sequences", an important method for sequencing a large genome.
(cont.) (2) Turning to the problem of obtaining the finished genomic sequence, we present ARACHNE, a prototype software system for assembling sequence data that are derived from sequencing a genome with the "shotgun" method. (3) Finally, we turn to the computational analysis of finished genomic sequence. We present GLASS, a software system for obtaining global pairwise alignments of orthologous finished sequences. We finally use GLASS to perform a comparative structure and sequence analysis of orthologous human and mouse genomic regions, and develop ROSETTA, the first cross-species comparison-based system for the prediction of protein coding regions in genomic sequences.
by Serafin Batzoglou.
Ph.D.
Roidl, Andreas. "“Functional Genomics”". Diss., lmu, 2007. http://nbn-resolving.de/urn:nbn:de:bvb:19-67491.
Texto completoTiwari, Jitesh. "Assembly and Automated Annotation of the Clostridium scatologenes Genome". TopSCHOLAR®, 2012. http://digitalcommons.wku.edu/theses/1175.
Texto completoSt, Jean Andrew Louis. "Haloarchaeal comparative genomics and the local context model of genomic evolution". Thesis, University of Ottawa (Canada), 1996. http://hdl.handle.net/10393/10308.
Texto completoAl-Nuaimi, Bashar. "Ancestral Reconstruction and Investigations of Genomics Recombination on Chloroplasts Genomes". Thesis, Bourgogne Franche-Comté, 2017. http://www.theses.fr/2017UBFCD042/document.
Texto completoThe theory of evolution is based on modern biology. All new species emerge of an existing species. As a result, different species share common ancestry,as represented in the phylogenetic classification. Common ancestry may explainthe similarities between all living organisms, such as general chemistry, cell structure,DNA as genetic material and genetic code. Individuals of one species share the same genes but (usually) different allele sequences of these genes. An individual inheritsalleles of their ancestry or their parents. The goal of phylogenetic studies is to analyzethe changes that occur in different organisms during evolution by identifying therelationships between genomic sequences and determining the ancestral sequences and theirdescendants. A phylogeny study can also estimate the time of divergence betweengroups of organisms that share a common ancestor. Phylogenetic trees are usefulin the fields of biology, such as bioinformatics, for systematic phylogeneticsand comparative. The evolutionary tree or the phylogenetic tree is a branched exposure the relationsevolutionary between various biological organisms or other existence depending on the differences andsimilarities in their genetic characteristics. Phylogenetic trees are built infrom molecular data such as DNA sequences and protein sequences. Ina phylogenetic tree, the nodes represent genomic sequences and are calledtaxonomic units. Each branch connects two adjacent nodes. Each similar sequencewill be a neighbor on the outer branches, and a common internal branch will link them to acommon ancestor. Internal branches are called hypothetical taxonomic units. Thus,Taxonomic units gathered in the tree involve being descended from a common ancestor. Ourresearch conducted in this dissertation focuses on improving evolutionary prototypesappropriate and robust algorithms to solve phylogenetic inference problems andancestral information about the order of genes and DNA data in the evolution of the complete genome, as well astheir applications
Gaiarsa, S. "EVOLUTION, COMPARATIVE GENOMICS AND GENOMIC EPIDEMIOLOGY OF BACTERIA OF PUBLIC HEALTH IMPORTANCE". Doctoral thesis, Università degli Studi di Milano, 2017. http://hdl.handle.net/2434/525881.
Texto completoThe present thesis is focused on genomic epidemiology of bacterial hospital infections. The hospital environment is unique, as it concentrates a high number of bacterial agents, frequent antibiotic use, and patients with weak immune systems. This combination favours the development and selection of antibiotic resistant strains and the spread of opportunistic infections: in general the thriving of nosocomial pathogens. Genomics and evolutionary approaches have emerged as the cutting edge tools for studying this kind of infections, allowing to study the genomic features of bacterial strains and their evolution. Thanks to the possibility to sequence DNA at a constantly cheaper price, research projects are supported by a growing number of genomes and a considerable amount of genomic data is available in the databases, expanding the amount of possible investigations that can be performed. The first work presented here describes the evolution of the Clonal Complex 258 (CC258) of Klebsiella pneumoniae. Single nucleotide polymorphisms (SNPs) allowed to reconstruct the global phylogeny of the entire species and to collocate the CC258 in its evolutionary context. Furthermore, it was possible to detect the presence of a 1.3 Mb recombination in the genomes of the clade in analysis. A molecular clock approach allowed to date this and other previously discovered recombination events. These findings were used to complete the picture of the evolutionary history of CC258, which is characterized by frequent macro-recombination events. A quick evolutive strategy characterized by exchange of high amount of information is a common feature to other nosocomial pathogens, which develop “superbug” phenotypes. Although common, the macro-recombination evolution model is not shared by all nosocomial infection bacteria. One exception is the SMAL strain of Acinetobacter baumannii, presented in another subproject of this thesis. In this work, the genomes of Sequence Type (ST) 78 of A. baumannii were analyzed. Phylogeny and comparative genomics revealed the presence of two different clades within the ST, presenting different evolutive “lifestyles”. One group (containing the SMAL genomes) was characterized by a lower gene content variability and by the presence of a higher copy number of insertion sequences (ISs). One IS interrupts the comEC/rec2 gene in all the SMAL genomes. This gene codes for a protein involved in the exogenous DNA importation, thus its inactivation limits the gene exchange, suggesting an explanation for the low genomic plasticity. In another work presented in this document, genomic epidemiology was applied to reconstruct the spreading routes of a K. pneumoniae epidemic event in an hospital intensive care unit. At first, a phylogenetic approach was used to separate the isolates that belonged to the outbreak from the sporadic ones. Then the isolation dates and genomic SNPs allowed to build a genomic network, which modelled the chain of infection events in the ward. The reconstruction suggested a star-like diffusion of the pathogen from patient zero to the other infected ones, thus revealing a systematic error in the biosafety procedures of the hospital. This almost-forensic application of genomic epidemiology was also used in two other works presented, both of them concerning the reconstruction of food-borne infections. In one of the works, focused on Salmonella enterica, only synonymous SNPs were used as input to a phylogenetic based investigation, in order to filter out pathoadaptative mutations. In the other article, epidemiological data, molecular typing and SNP-based phylogeny were used to investigate the infection of nine Listeria monocytogenes isolates, which were believed to be part of the same outbreak and in the end proved to be genomically unrelated. Lastly, a review paper on genomic epidemiology is also presented. The article is focused on the latest high impact publications analyzing the genome evolution of bacterial pathogens as well as the propagation dynamics of epidemic outbreaks in very short periods of time. The article also describes the latest historical epidemiological studies, which are possible thanks to modern DNA isolation and sequencing technologies.
Kern, Andrew David. "Drosophila population genomics /". For electronic version search Digital dissertations database. Restricted to UC campuses. Access is free to UC campus dissertations, 2005. http://uclibs.org/PID/11984.
Texto completoLoman, Nicholas James. "Comparative bacterial genomics". Thesis, University of Birmingham, 2012. http://etheses.bham.ac.uk//id/eprint/2839/.
Texto completoLin, Ying. "Development and assessment of machine learning attributes for ortholog detection". Access to citation, abstract and download form provided by ProQuest Information and Learning Company; downloadable PDF file 0.31 Mb., 65 p, 2006. http://wwwlib.umi.com/dissertations/fullcit/3220791.
Texto completoMeng, Da. "Bioinformatics tools for evaluating microbial relationships". Pullman, Wash. : Washington State University, 2009. http://www.dissertations.wsu.edu/Dissertations/Spring2009/d_meng_042209.pdf.
Texto completoTitle from PDF title page (viewed on June 8, 2009). "School of Electrical Engineering and Computer Science." Includes bibliographical references.
Libros sobre el tema "Genomics"
D, Thangadurai, Tang W. 1964- y Pullaiah T, eds. Genes, genomes, and genomics. New Delhi: Regency Publications, 2006.
Buscar texto completoPrimrose, Sandy B. y Richard M. Twyman, eds. Genomics. Malden, MA, USA: Blackwell Science Ltd, 2003. http://dx.doi.org/10.1002/9780470751282.
Texto completoStarkey, Mike y Ramnath Elaswarapu, eds. Genomics. Chichester, UK: John Wiley & Sons, Ltd, 2010. http://dx.doi.org/10.1002/9780470711675.
Texto completoD, Protopapas Alex, ed. Genomics. Upper Saddle River, NJ: Prentice-Hall, 2005.
Buscar texto completoFolta, Kevin M. Genetics and genomics of Rosaceae. New York, NY: Springer, 2009.
Buscar texto completoDassanayake, Ranil S. Genomic and proteomic techniques: In post genomics era. Oxford: Alpha Science International, 2011.
Buscar texto completoPalacios, Rafael y William E. Newton, eds. Genomes and Genomics of Nitrogen-fixing Organisms. Dordrecht: Springer Netherlands, 2005. http://dx.doi.org/10.1007/1-4020-3054-1.
Texto completoGojōbori, Takashi. Genomu kara mita seibutsu no tayōsei to shinka. Tōkyō: Shupuringā Fearāku Tōkyō, 2003.
Buscar texto completoH, Bergman Nicholas, ed. Comparative genomics. Totowa, NJ: Humana Press, 2007.
Buscar texto completoStarkey, Michael P. y Ramnath Elaswarapu. Genomics Protocols. New Jersey: Humana Press, 2001. http://dx.doi.org/10.1385/159259235x.
Texto completoCapítulos de libros sobre el tema "Genomics"
García-Sancho, Miguel y James Lowe. "Improving and Going Beyond Reference Genomes". En A History of Genomics across Species, Communities and Projects, 255–326. Cham: Springer International Publishing, 2023. http://dx.doi.org/10.1007/978-3-031-06130-1_7.
Texto completoGarcía-Sancho, Miguel y James Lowe. "Conclusion". En A History of Genomics across Species, Communities and Projects, 327–53. Cham: Springer International Publishing, 2023. http://dx.doi.org/10.1007/978-3-031-06130-1_8.
Texto completoOliveira, Antônio Costa, Luciano Carlos Maia, Daniel Rosa Farias y Naciele Marini. "Genomics". En Omics in Plant Breeding, 13–31. Chichester, UK: John Wiley & Sons, Inc, 2014. http://dx.doi.org/10.1002/9781118820971.ch2.
Texto completoPaus, Tomáš. "Genomics". En Population Neuroscience, 43–66. Berlin, Heidelberg: Springer Berlin Heidelberg, 2013. http://dx.doi.org/10.1007/978-3-642-36450-1_4.
Texto completoScaglione, Davide, Alberto Acquadro, Ezio Portis y Sergio Lanteri. "Genomics". En Compendium of Plant Genomes, 163–84. Cham: Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-20012-1_9.
Texto completoRamsden, Jeremy. "Genomics". En Computational Biology, 203–21. London: Springer London, 2015. http://dx.doi.org/10.1007/978-1-4471-6702-0_13.
Texto completoPriyadarshan, P. M. "Genomics". En PLANT BREEDING: Classical to Modern, 541–60. Singapore: Springer Singapore, 2019. http://dx.doi.org/10.1007/978-981-13-7095-3_24.
Texto completoHardy, Billie-Jo, Sarah E. Ali Khan y Abdallah S. Daar. "Genomics". En Encyclopedia of Global Bioethics, 1–14. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-05544-2_214-1.
Texto completoHardy, Billie-Jo, Sarah E. Ali Khan y Abdallah S. Daar. "Genomics". En Encyclopedia of Global Bioethics, 1–14. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-05544-2_214-2.
Texto completoPeck, Stewart B., Carol C. Mapes, Netta Dorchin, John B. Heppner, Eileen A. Buss, Gustavo Moya-Raygoza, Marjorie A. Hoy et al. "Genomics". En Encyclopedia of Entomology, 1606. Dordrecht: Springer Netherlands, 2008. http://dx.doi.org/10.1007/978-1-4020-6359-6_1069.
Texto completoActas de conferencias sobre el tema "Genomics"
STANLEY, SCOTT y BENJAMIN A. SALISBURY. "PHYLOGENETIC GENOMICS AND GENOMIC PHYLOGENETICS". En Proceedings of the Pacific Symposium. WORLD SCIENTIFIC, 2001. http://dx.doi.org/10.1142/9789812799623_0047.
Texto completoRubert, Diego P., Jens Stoye y Fábio H. V. Martinez. "Distance and Similarity Measures in Comparative Genomics". En Concurso de Teses e Dissertações da SBC. Sociedade Brasileira de Computação - SBC, 2020. http://dx.doi.org/10.5753/ctd.2020.11361.
Texto completoHUANG, HENG, LI SHEN, PAUL M. THOMPSON, KUN HUANG, JUNZHOU HUANG y LIN YANG. "IMAGING GENOMICS". En Pacific Symposium on Biocomputing 2018. WORLD SCIENTIFIC, 2017. http://dx.doi.org/10.1142/9789813235533_0028.
Texto completoSHEN, LI y LEE A. D. COOPER. "IMAGING GENOMICS". En Proceedings of the Pacific Symposium. WORLD SCIENTIFIC, 2016. http://dx.doi.org/10.1142/9789813207813_0006.
Texto completoToch, Eran, Netta Rager, Tal Florentin, Dan Linenberg, Daya Sellman y Noam Shomron. "Augmented-Genomics". En IUI'18: 23rd International Conference on Intelligent User Interfaces. New York, NY, USA: ACM, 2018. http://dx.doi.org/10.1145/3180308.3180326.
Texto completoStajano, Frank, Lucia Bianchi, Pietro Liò y Douwe Korff. "Forensic genomics". En the 7th ACM workshop. New York, New York, USA: ACM Press, 2008. http://dx.doi.org/10.1145/1456403.1456407.
Texto completoBesserud, Keith y Joshua Cotten. "Architectural Genomics". En ACADIA 2008: Silicon + Skin. ACADIA, 2008. http://dx.doi.org/10.52842/conf.acadia.2008.238.
Texto completoAbdullah, Tariq y Ahmed Ahmet. "Genomics Analyser". En UCC '17: 10th International Conference on Utility and Cloud Computing. New York, NY, USA: ACM, 2017. http://dx.doi.org/10.1145/3148055.3148072.
Texto completoHaussler, David. "Cancer genomics". En the 17th ACM SIGKDD international conference. New York, New York, USA: ACM Press, 2011. http://dx.doi.org/10.1145/2020408.2020414.
Texto completoDelderfield, Mark, Lee Kitching, Gareth Smith, David Hoyle y Iain Buchan. "Shared Genomics: Accessible High Performance Computing for Genomic Medical Research". En 2008 IEEE Fourth International Conference on eScience (eScience). IEEE, 2008. http://dx.doi.org/10.1109/escience.2008.132.
Texto completoInformes sobre el tema "Genomics"
Best, Stephanie, Clara Gaff, Natalie Taylor y Helen Brown. Frameworks to support the implementation of genomics into clinical care. The Sax Institute, noviembre de 2019. http://dx.doi.org/10.57022/daqw3432.
Texto completoSimison, W. Brian y Jeffrey L. Boore. Molluscan Evolutionary Genomics. Office of Scientific and Technical Information (OSTI), diciembre de 2005. http://dx.doi.org/10.2172/982432.
Texto completoBentley, Jennifer A., Megan Kregel y Kyra Bellrichard. Midwest Dairy Day Focuses on Genomics 101: Putting Genomics to Work. Ames (Iowa): Iowa State University, enero de 2016. http://dx.doi.org/10.31274/ans_air-180814-220.
Texto completoTerwilliger, Thomas C. Achievements of structural genomics. Office of Scientific and Technical Information (OSTI), octubre de 2013. http://dx.doi.org/10.2172/1095844.
Texto completoCarlson, Jake. Human Genomics - Purdue University. Purdue University Libraries, octubre de 2009. http://dx.doi.org/10.5703/1288284315006.
Texto completoCarlson, Jake. Plant Genomics - Purdue University. Purdue University Libraries, octubre de 2009. http://dx.doi.org/10.5703/1288284315011.
Texto completoGrigoriev, Igor V. JGI Fungal Genomics Program. Office of Scientific and Technical Information (OSTI), marzo de 2011. http://dx.doi.org/10.2172/1012482.
Texto completoWiwanitkit, Viroj y Viroj Wiwanitkit. PHYSIOLOGICAL GENOMICS IN MANIA. Buenos Aires: siicsalud.com, septiembre de 2017. http://dx.doi.org/10.21840/siic/148771.
Texto completoLennie, Peter. Facilities and Equipment for Genomics/Comparative Functional Genomics at New York University. Office of Scientific and Technical Information (OSTI), junio de 2006. http://dx.doi.org/10.2172/898062.
Texto completoStarkenburg, Shawn. Genomics for Biosecurity and Bioenergy. Office of Scientific and Technical Information (OSTI), agosto de 2020. http://dx.doi.org/10.2172/1657114.
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