Literatura académica sobre el tema "CTCF protein"
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Artículos de revistas sobre el tema "CTCF protein"
Voutsadakis, Ioannis. "Molecular Lesions of Insulator CTCF and Its Paralogue CTCFL (BORIS) in Cancer: An Analysis from Published Genomic Studies". High-Throughput 7, n.º 4 (1 de octubre de 2018): 30. http://dx.doi.org/10.3390/ht7040030.
Texto completoMacPherson, Melissa J., Linda G. Beatty, Wenjing Zhou, Minjie Du y Paul D. Sadowski. "The CTCF Insulator Protein Is Posttranslationally Modified by SUMO". Molecular and Cellular Biology 29, n.º 3 (24 de noviembre de 2008): 714–25. http://dx.doi.org/10.1128/mcb.00825-08.
Texto completoPugacheva, Elena M., Naoki Kubo, Dmitri Loukinov, Md Tajmul, Sungyun Kang, Alexander L. Kovalchuk, Alexander V. Strunnikov, Gabriel E. Zentner, Bing Ren y Victor V. Lobanenkov. "CTCF mediates chromatin looping via N-terminal domain-dependent cohesin retention". Proceedings of the National Academy of Sciences 117, n.º 4 (14 de enero de 2020): 2020–31. http://dx.doi.org/10.1073/pnas.1911708117.
Texto completoKlenova, E. M., R. H. Nicolas, H. F. Paterson, A. F. Carne, C. M. Heath, G. H. Goodwin, P. E. Neiman y V. V. Lobanenkov. "CTCF, a conserved nuclear factor required for optimal transcriptional activity of the chicken c-myc gene, is an 11-Zn-finger protein differentially expressed in multiple forms". Molecular and Cellular Biology 13, n.º 12 (diciembre de 1993): 7612–24. http://dx.doi.org/10.1128/mcb.13.12.7612-7624.1993.
Texto completoKlenova, E. M., R. H. Nicolas, H. F. Paterson, A. F. Carne, C. M. Heath, G. H. Goodwin, P. E. Neiman y V. V. Lobanenkov. "CTCF, a conserved nuclear factor required for optimal transcriptional activity of the chicken c-myc gene, is an 11-Zn-finger protein differentially expressed in multiple forms." Molecular and Cellular Biology 13, n.º 12 (diciembre de 1993): 7612–24. http://dx.doi.org/10.1128/mcb.13.12.7612.
Texto completoWang, Jie, Yumei Wang y Luo Lu. "De-SUMOylation of CCCTC Binding Factor (CTCF) in Hypoxic Stress-induced Human Corneal Epithelial Cells". Journal of Biological Chemistry 287, n.º 15 (21 de febrero de 2012): 12469–79. http://dx.doi.org/10.1074/jbc.m111.286641.
Texto completoLehman, Bettina J., Fernando J. Lopez-Diaz, Thom P. Santisakultarm, Linjing Fang, Maxim N. Shokhirev, Kenneth E. Diffenderfer, Uri Manor y Beverly M. Emerson. "Dynamic regulation of CTCF stability and sub-nuclear localization in response to stress". PLOS Genetics 17, n.º 1 (7 de enero de 2021): e1009277. http://dx.doi.org/10.1371/journal.pgen.1009277.
Texto completoDaruliza Kernain y Shaharum Shamsuddin. "Interaction between Two Transcriptional Factors CTCF and YB-1 – Truncated domains in Brain Cancer Cell line". International Journal of Research in Pharmaceutical Sciences 10, n.º 4 (16 de octubre de 2019): 3332–38. http://dx.doi.org/10.26452/ijrps.v10i4.1642.
Texto completoChernukhin, Igor, Shaharum Shamsuddin, Sung Yun Kang, Rosita Bergström, Yoo-Wook Kwon, WenQiang Yu, Joanne Whitehead et al. "CTCF Interacts with and Recruits the Largest Subunit of RNA Polymerase II to CTCF Target Sites Genome-Wide". Molecular and Cellular Biology 27, n.º 5 (8 de enero de 2007): 1631–48. http://dx.doi.org/10.1128/mcb.01993-06.
Texto completoMaksimenko, Oksana G., Dariya V. Fursenko, Elena V. Belova y Pavel G. Georgiev. "CTCF As an Example of DNA-Binding Transcription Factors Containing Clusters of C2H2-Type Zinc Fingers". Acta Naturae 13, n.º 1 (15 de marzo de 2021): 31–46. http://dx.doi.org/10.32607/actanaturae.11206.
Texto completoTesis sobre el tema "CTCF protein"
Fischer, Sabine. "Inducible systems for the characterization of insulating and repressing motifs". kostenfrei, 2009. http://d-nb.info/999863568/34.
Texto completoNobelen, Suzanne van de. "Touched by CTCF analysis of a multi-functional zinc finger protein /". [S.l.] : Rotterdam : [The Author] ; Erasmus University [Host], 2008. http://hdl.handle.net/1765/12282.
Texto completoPanzer, Imke [Verfasser]. "Identifizierung und Analyse von Protein-Interaktionspartnern des Isolationsfaktors CTCF / Imke Panzer". Gießen : Universitätsbibliothek, 2012. http://d-nb.info/1063954177/34.
Texto completoZielke, Katrin [Verfasser] y Andreas [Akademischer Betreuer] Burkovski. "The insulator protein CTCF and cohesins are critical for Herpesvirus saimiri genome maintenance = Das Insulatorprotein CTCF und Kohäsine sind kritisch für die Erhaltung der Genome von Herpesvirus saimiri / Katrin Zielke. Betreuer: Andreas Burkovski". Erlangen : Universitätsbibliothek der Universität Erlangen-Nürnberg, 2012. http://d-nb.info/1021259632/34.
Texto completoSegueni, Julie. "DNA methylation changes CTCF binding and reorganizes 3D genome structure in breast cancer cells". Electronic Thesis or Diss., université Paris-Saclay, 2024. http://www.theses.fr/2024UPASL020.
Texto completoMammalian genomes adopt a functional 3D organization where enhancer-promoter interactions are constrained within Topologically Associating Domains (TADs). The CTCF insulator protein has a dual role in this process, with binding at promoters resulting in the formation of enhancer-promoter loops (intra-TAD structure) and binding at TAD boundaries preventing the formation of inappropriate loops between neighboring domains. Importantly, perturbations of CTCF binding at specific sites in cancer cells can be caused by both changes to the DNA sequence (mutations) or DNA methylation changes (epi-mutations). We first performed precisely-calibrated CTCF ChIP-seq experiments and found that a large number of sites are differentially bound, with a substantial fraction of differential CTCF binding peaks shared among cancer cell lines. Differential CTCF peaks can both be gained and lost and are often localized close to genes associated with breast cancer transformation. We found a striking correlation between CTCF binding changes and H3K27ac changes indicating a link between CTCF binding and the activity of cis-regulatory elements (CREs). Using high-resolution Hi-C, we assessed the impact of differential CTCF binding on chromatin structure, characterizing considerable 3D genome reorganization at gene loci with perturbed CTCF peaks. Unexpectedly, we find the most drastic examples of reorganization within TADs, at the level of enhancer-promoter loops. Then, we identified DNA methylation changes as the upstream cause of CTCF binding deregulation in our breast cancer model. Using genome-wide hypomethylating agent, we were able to partially reverse observed CTCF binding changes and the gene expression changes they induced. Our work thus identifies a pervasive DNA-methylation-guided reorganization of CTCF binding and intra-TAD structure. Such recurrent patterns of epi-mutations can provide a mechanistic explanation for shared gene deregulation in cancers
Malashchuk, Ogor. "Epigenetic regulation of skin development and postnatal homeostasis : the role of chromatin architectural protein Ctcf in the control of keratinocyte differentiation and epidermal barrier formation". Thesis, University of Bradford, 2016. http://hdl.handle.net/10454/14791.
Texto completoMalashchuk, Igor. "Epigenetic Regulation of Skin Development and Postnatal Homeostasis The role of chromatin architectural protein Ctcf in the control of Keratinocyte Differentiation and Epidermal Barrier Formation". Thesis, University of Bradford, 2016. http://hdl.handle.net/10454/14791.
Texto completoShamsuddin, S. "Biochemical characterization of the interactions between a transcription factor, CTCF and its partners Y-Box binding protein-1, and the large subunit of RNA polymerase II". Thesis, University of Oxford, 2002. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.269484.
Texto completoAlharbi, Adel Braik M. "Characterising the Roles of Zinc Finger Proteins CTCF and ZRANB2 in Modulating Alternative Splicing". Thesis, The University of Sydney, 2021. https://hdl.handle.net/2123/27996.
Texto completoBall, DeAnna K. "Establishment of a recombinant CTGF expression system in vitro that models CTGF processing in vivo : structural and functional characterization of multiple mass CTGF proteins /". The Ohio State University, 2001. http://rave.ohiolink.edu/etdc/view?acc_num=osu1486397841221133.
Texto completoCapítulos de libros sobre el tema "CTCF protein"
Nanni, Luca. "Computational Inference of DNA Folding Principles: From Data Management to Machine Learning". En Special Topics in Information Technology, 79–88. Cham: Springer International Publishing, 2022. http://dx.doi.org/10.1007/978-3-030-85918-3_7.
Texto completoEguchi, Takanori, Satoshi Kubota, Kazumi Kawata, Yoshiki Mukudai, Junji Uehara, Toshihiro Ohgawara, Soichiro Ibaragi, Akira Sasaki, Takuo Kuboki y Masaharu Takigawa. "Novel Transcriptional Regulation of CCN2/CTGF by Nuclear Translocation of MMP3". En CCN Proteins in Health and Disease, 255–64. Dordrecht: Springer Netherlands, 2010. http://dx.doi.org/10.1007/978-90-481-3779-4_19.
Texto completoWang, Weihan, Cynthia Jose, Nicholas Kenney, Bethanie Morrison y Mary Lou Cutler. "Global Expression Profiling Reveals a Role for CTGF/CCN2 in Lactogenic Differentiation of Mouse Mammary Epithelial Cells". En CCN Proteins in Health and Disease, 141–62. Dordrecht: Springer Netherlands, 2010. http://dx.doi.org/10.1007/978-90-481-3779-4_12.
Texto completoRiser, Bruce L., Feridoon Najmabadi, Bernard Perbal, Jo Ann Rambow, Melisa L. Riser, Ernest Sukowski, Herman Yeger, Sarah C. Riser y Darryl R. Peterson. "CCN3 (NOV): A Negative Regulator of CCN2 (CTGF) Activity and an Endogenous Inhibitor of Fibrosis in Experimental Diabetic Nephropathy". En CCN Proteins in Health and Disease, 163–81. Dordrecht: Springer Netherlands, 2010. http://dx.doi.org/10.1007/978-90-481-3779-4_13.
Texto completoFilippova, Galina N. "Genetics and Epigenetics of the Multifunctional Protein CTCF". En Current Topics in Developmental Biology, 337–60. Elsevier, 2007. http://dx.doi.org/10.1016/s0070-2153(07)80009-3.
Texto completoLucchesi, John C. "Architectural organization of the genome". En Epigenetics, Nuclear Organization & Gene Function, 125–39. Oxford University Press, 2019. http://dx.doi.org/10.1093/oso/9780198831204.003.0010.
Texto completoTakigawa, Masaharu, Takashi Nishida y Satoshi Kubota. "ROLES OF CCN2/CTGF IN THE CONTROL OF GROWTH AND REGENERATION". En CCN Proteins, 19–59. PUBLISHED BY IMPERIAL COLLEGE PRESS AND DISTRIBUTED BY WORLD SCIENTIFIC PUBLISHING CO., 2005. http://dx.doi.org/10.1142/9781860946899_0002.
Texto completoPing Lin, Peter. "Liquid Biopsy Analysis of Circulating Tumor Biomarkers in Lung Cancer". En Lung Cancer - Modern Multidisciplinary Management [Working Title]. IntechOpen, 2020. http://dx.doi.org/10.5772/intechopen.95422.
Texto completoSomegowda, Madhusudana, Achur N. Rajeshwara, S. Raghavendra, Siddanakoppalu N. Pramod, R. Sagar, G. N. Thippeshappa y Shankarappa Shridhara. "Phenylpropanoid Pathway for Lignin Biosynthesis and Protein Defensive Strategy against Melon Fly". En Current Topics on Chemistry and Biochemistry Vol. 3, 173–97. Book Publisher International (a part of SCIENCEDOMAIN International), 2022. http://dx.doi.org/10.9734/bpi/ctcb/v3/2608a.
Texto completosuwairi, Wafaa y matthew L. Warman. "WISP3 and Progressive Pseudorheumatoid Dysplasia". En Inborn Errors Of Development, 336–39. Oxford University PressNew York, NY, 2008. http://dx.doi.org/10.1093/oso/9780195306910.003.0027.
Texto completoActas de conferencias sobre el tema "CTCF protein"
Myung, Ja Hye, Cari A. Launiere, Khyati A. Gajjar, David T. Eddington y Seungpyo Hong. "Enhanced Tumor Cell Separation by Surfaces Functionalized With Combinations of Bioadhesive Proteins". En ASME 2010 First Global Congress on NanoEngineering for Medicine and Biology. ASMEDC, 2010. http://dx.doi.org/10.1115/nemb2010-13210.
Texto completoLiu, Wenye, Cong Sun, Yechao Han y Laifu Du. "Predicition of Three-Dimensional Structure of CTGF Protein". En 2015 7th International Conference on Information Technology in Medicine and Education (ITME). IEEE, 2015. http://dx.doi.org/10.1109/itme.2015.176.
Texto completoRivandi, M., A. Franken, A. Abramova, L. Yang, B. Gierke, J. Eberhardt, M. Beer et al. "ZeptoCTC: a high-sensitivity method for protein analysis in single CTCs". En 42. Jahreskongress der Deutschen Gesellschaft für Senologie e.V. (DGS). Georg Thieme Verlag, 2023. http://dx.doi.org/10.1055/s-0043-1769159.
Texto completoAgerbæk, Mette Ø., Sara R. Bang-Christensen, Ming-Hsin Yang, Thomas M. Clausen, Sisse B. Ditlev, Marina A. Pereira, Morten A. Nielsen et al. "Abstract 4595: The VAR2CSA malaria protein efficiently retrieves CTCs from a broad spectrum of cancers". En Proceedings: AACR Annual Meeting 2018; April 14-18, 2018; Chicago, IL. American Association for Cancer Research, 2018. http://dx.doi.org/10.1158/1538-7445.am2018-4595.
Texto completoSimone, E. R., T. A. Davies, N. A. Zabe, S. M. Greenberg-seperaky y N. E. Larsen. "EARLY PLATELET-THROMBIN RECEPTORS AND THEIR FUNCTIONS". En XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1643730.
Texto completoOntiveros, Priscilla, Connie Landaverde, Maren K. Levin, Sarah Hippely, Mark Landers, Yipeng Wang, Ryan Dittamore y Joyce A. O'Shaughnessy. "Abstract 457: HER2, AR protein expression and chromosomal instability in circulating tumor cells (CTCs) of metastatic breast cancer (MBC) patients (pts)". En Proceedings: AACR Annual Meeting 2019; March 29-April 3, 2019; Atlanta, GA. American Association for Cancer Research, 2019. http://dx.doi.org/10.1158/1538-7445.sabcs18-457.
Texto completoOntiveros, Priscilla, Connie Landaverde, Maren K. Levin, Sarah Hippely, Mark Landers, Yipeng Wang, Ryan Dittamore y Joyce A. O'Shaughnessy. "Abstract 457: HER2, AR protein expression and chromosomal instability in circulating tumor cells (CTCs) of metastatic breast cancer (MBC) patients (pts)". En Proceedings: AACR Annual Meeting 2019; March 29-April 3, 2019; Atlanta, GA. American Association for Cancer Research, 2019. http://dx.doi.org/10.1158/1538-7445.am2019-457.
Texto completoRenier, Corinne, Charles L. Wilkerson, SJ Claire Hur, Da Eun Rachel Park, Clementine A. Lemaire, Melissa Matsumoto, James Carroll et al. "Abstract 3664: A workflow to evaluate PD-L1 protein expression on circulating tumor cells (CTCs) from non-small cell lung cancer (NSCLC)". En Proceedings: AACR Annual Meeting 2018; April 14-18, 2018; Chicago, IL. American Association for Cancer Research, 2018. http://dx.doi.org/10.1158/1538-7445.am2018-3664.
Texto completoFernandez, Luisa, John Poirier, Angel Rodriguez, Melanie Hulling, Robin Richardson, Ramsay Sutton, Rhett Jiles et al. "Abstract 1348: Characterization of SLFN11 protein expression in circulating tumor cells (CTCs) of patients with metastatic castration resistant prostate cancer (mCRPC) prior to platinum based chemotherapy". En Proceedings: AACR Annual Meeting 2019; March 29-April 3, 2019; Atlanta, GA. American Association for Cancer Research, 2019. http://dx.doi.org/10.1158/1538-7445.sabcs18-1348.
Texto completoFernandez, Luisa, John Poirier, Angel Rodriguez, Melanie Hulling, Robin Richardson, Ramsay Sutton, Rhett Jiles et al. "Abstract 1348: Characterization of SLFN11 protein expression in circulating tumor cells (CTCs) of patients with metastatic castration resistant prostate cancer (mCRPC) prior to platinum based chemotherapy". En Proceedings: AACR Annual Meeting 2019; March 29-April 3, 2019; Atlanta, GA. American Association for Cancer Research, 2019. http://dx.doi.org/10.1158/1538-7445.am2019-1348.
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