Artículos de revistas sobre el tema "CRISPR spacers"
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Horvath, Philippe, Dennis A. Romero, Anne-Claire Coûté-Monvoisin, Melissa Richards, Hélène Deveau, Sylvain Moineau, Patrick Boyaval, Christophe Fremaux y Rodolphe Barrangou. "Diversity, Activity, and Evolution of CRISPR Loci in Streptococcus thermophilus". Journal of Bacteriology 190, n.º 4 (7 de diciembre de 2007): 1401–12. http://dx.doi.org/10.1128/jb.01415-07.
Texto completoToro, Magaly, Guojie Cao, Wenting Ju, Marc Allard, Rodolphe Barrangou, Shaohua Zhao, Eric Brown y Jianghong Meng. "Association of Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Elements with Specific Serotypes and Virulence Potential of Shiga Toxin-Producing Escherichia coli". Applied and Environmental Microbiology 80, n.º 4 (13 de diciembre de 2013): 1411–20. http://dx.doi.org/10.1128/aem.03018-13.
Texto completoAchigar, Rodrigo, Martina Scarrone, Geneviève M. Rousseau, Cécile Philippe, Felipe Machado, Valentina Duvós, María Pía Campot et al. "Ectopic Spacer Acquisition in Streptococcus thermophilus CRISPR3 Array". Microorganisms 9, n.º 3 (1 de marzo de 2021): 512. http://dx.doi.org/10.3390/microorganisms9030512.
Texto completovan der Ploeg, Jan R. "Analysis of CRISPR in Streptococcus mutans suggests frequent occurrence of acquired immunity against infection by M102-like bacteriophages". Microbiology 155, n.º 6 (1 de junio de 2009): 1966–76. http://dx.doi.org/10.1099/mic.0.027508-0.
Texto completoSerbanescu, M. A., M. Cordova, K. Krastel, R. Flick, N. Beloglazova, A. Latos, A. F. Yakunin, D. B. Senadheera y D. G. Cvitkovitch. "Role of the Streptococcus mutans CRISPR-Cas Systems in Immunity and Cell Physiology". Journal of Bacteriology 197, n.º 4 (8 de diciembre de 2014): 749–61. http://dx.doi.org/10.1128/jb.02333-14.
Texto completoPavlova, Yekaterina S., David Paez-Espino, Andrew Yu Morozov y Ilya S. Belalov. "Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling". PLOS Computational Biology 17, n.º 3 (26 de marzo de 2021): e1008841. http://dx.doi.org/10.1371/journal.pcbi.1008841.
Texto completoDeveau, Hélène, Rodolphe Barrangou, Josiane E. Garneau, Jessica Labonté, Christophe Fremaux, Patrick Boyaval, Dennis A. Romero, Philippe Horvath y Sylvain Moineau. "Phage Response to CRISPR-Encoded Resistance in Streptococcus thermophilus". Journal of Bacteriology 190, n.º 4 (7 de diciembre de 2007): 1390–400. http://dx.doi.org/10.1128/jb.01412-07.
Texto completoBolotin, Alexander, Benoit Quinquis, Alexei Sorokin y S. Dusko Ehrlich. "Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin". Microbiology 151, n.º 8 (1 de agosto de 2005): 2551–61. http://dx.doi.org/10.1099/mic.0.28048-0.
Texto completoHeussler, Gary E., Jon L. Miller, Courtney E. Price, Alan J. Collins y George A. O'Toole. "Requirements for Pseudomonas aeruginosa Type I-F CRISPR-Cas Adaptation Determined Using a Biofilm Enrichment Assay". Journal of Bacteriology 198, n.º 22 (29 de agosto de 2016): 3080–90. http://dx.doi.org/10.1128/jb.00458-16.
Texto completoLopatina, Anna, Sofia Medvedeva, Daria Artamonova, Matvey Kolesnik, Vasily Sitnik, Yaroslav Ispolatov y Konstantin Severinov. "Natural diversity of CRISPR spacers of Thermus : evidence of local spacer acquisition and global spacer exchange". Philosophical Transactions of the Royal Society B: Biological Sciences 374, n.º 1772 (25 de marzo de 2019): 20180092. http://dx.doi.org/10.1098/rstb.2018.0092.
Texto completoMojica, F. J. M., C. Díez-Villaseñor, J. García-Martínez y C. Almendros. "Short motif sequences determine the targets of the prokaryotic CRISPR defence system". Microbiology 155, n.º 3 (1 de marzo de 2009): 733–40. http://dx.doi.org/10.1099/mic.0.023960-0.
Texto completoBarrangou, Rodolphe, Anne-Claire Coûté-Monvoisin, Buffy Stahl, Isabelle Chavichvily, Florian Damange, Dennis A. Romero, Patrick Boyaval, Christophe Fremaux y Philippe Horvath. "Genomic impact of CRISPR immunization against bacteriophages". Biochemical Society Transactions 41, n.º 6 (20 de noviembre de 2013): 1383–91. http://dx.doi.org/10.1042/bst20130160.
Texto completoKiro, Ruth, Moran G. Goren, Ido Yosef y Udi Qimron. "CRISPR adaptation in Escherichia coli subtypeI-E system". Biochemical Society Transactions 41, n.º 6 (20 de noviembre de 2013): 1412–15. http://dx.doi.org/10.1042/bst20130109.
Texto completoBriner, Alexandra E. y Rodolphe Barrangou. "Lactobacillus buchneri Genotyping on the Basis of Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Locus Diversity". Applied and Environmental Microbiology 80, n.º 3 (22 de noviembre de 2013): 994–1001. http://dx.doi.org/10.1128/aem.03015-13.
Texto completoSilva, Adrianne M. A., Ana C. O. Luz, Keyla V. M. Xavier, Maria P. S. Barros, Hirisleide B. Alves, Marcus V. A. Batista y Tereza C. Leal-Balbino. "Analysis of CRISPR/Cas Genetic Structure, Spacer Content and Molecular Epidemiology in Brazilian Acinetobacter baumannii Clinical Isolates". Pathogens 12, n.º 6 (26 de mayo de 2023): 764. http://dx.doi.org/10.3390/pathogens12060764.
Texto completoWatson, B. N. J., R. A. Easingwood, B. Tong, M. Wolf, G. P. C. Salmond, R. H. J. Staals, M. Bostina y P. C. Fineran. "Different genetic and morphological outcomes for phages targeted by single or multiple CRISPR-Cas spacers". Philosophical Transactions of the Royal Society B: Biological Sciences 374, n.º 1772 (25 de marzo de 2019): 20180090. http://dx.doi.org/10.1098/rstb.2018.0090.
Texto completoKuno, Sotaro, Takashi Yoshida, Takakazu Kaneko y Yoshihiko Sako. "Intricate Interactions between the Bloom-Forming Cyanobacterium Microcystis aeruginosa and Foreign Genetic Elements, Revealed by Diversified Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Signatures". Applied and Environmental Microbiology 78, n.º 15 (25 de mayo de 2012): 5353–60. http://dx.doi.org/10.1128/aem.00626-12.
Texto completoStepanenko, L. A., Yu P. Dzhioev, V. I. Zlobin, A. Yu Borisenko, V. P. Salovarova, N. A. Arefieva, I. Zh Seminsky y I. V. Malov. "Development of screening approaches of highly specific bacteriophages based on bioinformatic analysis of CRISPR-Cas structures of Corynebacterium diphtheriae systems". Proceedings of Universities. Applied Chemistry and Biotechnology 11, n.º 2 (4 de julio de 2021): 216–27. http://dx.doi.org/10.21285/2227-2925-2021-11-2-216-227.
Texto completoMcKitterick, Amelia C., Kristen N. LeGault, Angus Angermeyer, Munirul Alam y Kimberley D. Seed. "Competition between mobile genetic elements drives optimization of a phage-encoded CRISPR-Cas system: insights from a natural arms race". Philosophical Transactions of the Royal Society B: Biological Sciences 374, n.º 1772 (25 de marzo de 2019): 20180089. http://dx.doi.org/10.1098/rstb.2018.0089.
Texto completoSemenova, Ekaterina, Ekaterina Savitskaya, Olga Musharova, Alexandra Strotskaya, Daria Vorontsova, Kirill A. Datsenko, Maria D. Logacheva y Konstantin Severinov. "Highly efficient primed spacer acquisition from targets destroyed by the Escherichia coli type I-E CRISPR-Cas interfering complex". Proceedings of the National Academy of Sciences 113, n.º 27 (20 de junio de 2016): 7626–31. http://dx.doi.org/10.1073/pnas.1602639113.
Texto completoStepanenko, L. A., B. G. Sukhov, V. V. Bedinskaya, A. Yu Borisenko y T. V. Kon’kova. "Developing approaches for search and analysis of CRISPR-Cas systems on the example of <i>Klebsiella pneumoniae</i> strains as a basis for creating personalized bacteriophage therapy". Proceedings of Universities. Applied Chemistry and Biotechnology 13, n.º 2 (2 de julio de 2023): 197–205. http://dx.doi.org/10.21285/2227-2925-2023-13-2-197-205.
Texto completoManiv, Inbal, Wenyan Jiang, David Bikard y Luciano A. Marraffini. "Impact of Different Target Sequences on Type III CRISPR-Cas Immunity". Journal of Bacteriology 198, n.º 6 (11 de enero de 2016): 941–50. http://dx.doi.org/10.1128/jb.00897-15.
Texto completoNussenzweig, Philip M. y Luciano A. Marraffini. "Molecular Mechanisms of CRISPR-Cas Immunity in Bacteria". Annual Review of Genetics 54, n.º 1 (23 de noviembre de 2020): 93–120. http://dx.doi.org/10.1146/annurev-genet-022120-112523.
Texto completoKuno, Sotaro, Yoshihiko Sako y Takashi Yoshida. "Diversification of CRISPR within coexisting genotypes in a natural population of the bloom-forming cyanobacterium Microcystis aeruginosa". Microbiology 160, n.º 5 (1 de mayo de 2014): 903–16. http://dx.doi.org/10.1099/mic.0.073494-0.
Texto completoShiriaeva, Anna, Ivan Fedorov, Danylo Vyhovskyi y Konstantin Severinov. "Detection of CRISPR adaptation". Biochemical Society Transactions 48, n.º 1 (3 de febrero de 2020): 257–69. http://dx.doi.org/10.1042/bst20190662.
Texto completoGonzález-Delgado, Alejandro, Mario Rodríguez Mestre, Francisco Martínez-Abarca y Nicolás Toro. "Spacer acquisition from RNA mediated by a natural reverse transcriptase-Cas1 fusion protein associated with a type III-D CRISPR–Cas system in Vibrio vulnificus". Nucleic Acids Research 47, n.º 19 (4 de septiembre de 2019): 10202–11. http://dx.doi.org/10.1093/nar/gkz746.
Texto completoHsu, Jen-Fu, Jang-Jih Lu, Chih Lin, Shih-Ming Chu, Lee-Chung Lin, Mei-Yin Lai, Hsuan-Rong Huang, Ming-Chou Chiang y Ming-Horng Tsai. "Clustered Regularly Interspaced Short Palindromic Repeat Analysis of Clonal Complex 17 Serotype III Group B Streptococcus Strains Causing Neonatal Invasive Diseases". International Journal of Molecular Sciences 22, n.º 21 (27 de octubre de 2021): 11626. http://dx.doi.org/10.3390/ijms222111626.
Texto completoKurilovich, Elena, Anna Shiriaeva, Anastasia Metlitskaya, Natalia Morozova, Ivana Ivancic-Bace, Konstantin Severinov y Ekaterina Savitskaya. "Genome Maintenance Proteins Modulate Autoimmunity Mediated Primed Adaptation by the Escherichia coli Type I-E CRISPR-Cas System". Genes 10, n.º 11 (31 de octubre de 2019): 872. http://dx.doi.org/10.3390/genes10110872.
Texto completoMoller, Abraham G. y Chun Liang. "MetaCRAST: reference-guided extraction of CRISPR spacers from unassembled metagenomes". PeerJ 5 (7 de septiembre de 2017): e3788. http://dx.doi.org/10.7717/peerj.3788.
Texto completoPourcel, C., G. Salvignol y G. Vergnaud. "CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies". Microbiology 151, n.º 3 (1 de marzo de 2005): 653–63. http://dx.doi.org/10.1099/mic.0.27437-0.
Texto completoAviram, Naama, Ashley N. Thornal, David Zeevi y Luciano A. Marraffini. "Different modes of spacer acquisition by the Staphylococcus epidermidis type III-A CRISPR-Cas system". Nucleic Acids Research 50, n.º 3 (20 de enero de 2022): 1661–72. http://dx.doi.org/10.1093/nar/gkab1299.
Texto completoGarrett, Sandra, Masami Shiimori, Elizabeth A. Watts, Landon Clark, Brenton R. Graveley y Michael P. Terns. "Primed CRISPR DNA uptake in Pyrococcus furiosus". Nucleic Acids Research 48, n.º 11 (18 de mayo de 2020): 6120–35. http://dx.doi.org/10.1093/nar/gkaa381.
Texto completoBedinskaya, V. V., L. A. Stepanenko, E. V. Simonova, A. G. Atlas, E. B. Rakova y V. I. Zlobin. "Characterization of CRISPR/CAS System in Pseudomonas aeruginosa DSM 50071 Based on Bioinformatic Analysis of its Structures". Bulletin of Irkutsk State University. Series Biology. Ecology 40 (2022): 3–14. http://dx.doi.org/10.26516/2073-3372.2022.40.3.
Texto completoBorisenko, A. Yu, N. A. Arefieva, Yu P. Dzhioev, S. V. Erdyneev, Yu S. Bukin, G. A. Teterina, A. A. Pristavka et al. "In Silico Analysis of the Structural Diversity of CRISPR-Cas Systems in Genomes of Salmonella enterica and Phage Species Detected by Them". Bulletin of Irkutsk State University. Series Biology. Ecology 45 (2023): 3–20. http://dx.doi.org/10.26516/2073-3372.2023.45.3.
Texto completoBonsma-Fisher, Madeleine, Dominique Soutière y Sidhartha Goyal. "How adaptive immunity constrains the composition and fate of large bacterial populations". Proceedings of the National Academy of Sciences 115, n.º 32 (23 de julio de 2018): E7462—E7468. http://dx.doi.org/10.1073/pnas.1802887115.
Texto completoSorokin, Valery A., Mikhail S. Gelfand y Irena I. Artamonova. "Evolutionary Dynamics of Clustered Irregularly Interspaced Short Palindromic Repeat Systems in the Ocean Metagenome". Applied and Environmental Microbiology 76, n.º 7 (29 de enero de 2010): 2136–44. http://dx.doi.org/10.1128/aem.01985-09.
Texto completoDeecker, Shayna R. y Alexander W. Ensminger. "Type I-F CRISPR-Cas Distribution and Array Dynamics in Legionella pneumophila". G3: Genes|Genomes|Genetics 10, n.º 3 (14 de enero de 2020): 1039–50. http://dx.doi.org/10.1534/g3.119.400813.
Texto completoBozic, Bojan, Jelena Repac y Marko Djordjevic. "Endogenous Gene Regulation as a Predicted Main Function of Type I-E CRISPR/Cas System in E. coli". Molecules 24, n.º 4 (21 de febrero de 2019): 784. http://dx.doi.org/10.3390/molecules24040784.
Texto completoArtamonova, Daria, Karyna Karneyeva, Sofia Medvedeva, Evgeny Klimuk, Matvey Kolesnik, Anna Yasinskaya, Aleksei Samolygo y Konstantin Severinov. "Spacer acquisition by Type III CRISPR–Cas system during bacteriophage infection of Thermus thermophilus". Nucleic Acids Research 48, n.º 17 (21 de agosto de 2020): 9787–803. http://dx.doi.org/10.1093/nar/gkaa685.
Texto completoTanmoy, Arif Mohammad, Chinmoy Saha, Mohammad Saiful Islam Sajib, Senjuti Saha, Florence Komurian-Pradel, Alex van Belkum, Rogier Louwen, Samir Kumar Saha y Hubert P. Endtz. "CRISPR-Cas Diversity in Clinical Salmonella enterica Serovar Typhi Isolates from South Asian Countries". Genes 11, n.º 11 (18 de noviembre de 2020): 1365. http://dx.doi.org/10.3390/genes11111365.
Texto completoStamereilers, Casey, Simon Wong y Philippos K. Tsourkas. "Characterization of CRISPR Spacer and Protospacer Sequences in Paenibacillus larvae and Its Bacteriophages". Viruses 13, n.º 3 (11 de marzo de 2021): 459. http://dx.doi.org/10.3390/v13030459.
Texto completoNobrega, Franklin L., Hielke Walinga, Bas E. Dutilh y Stan J. J. Brouns. "Prophages are associated with extensive CRISPR–Cas auto-immunity". Nucleic Acids Research 48, n.º 21 (21 de noviembre de 2020): 12074–84. http://dx.doi.org/10.1093/nar/gkaa1071.
Texto completoHeussler, Gary E. y George A. O'Toole. "Friendly Fire: Biological Functions and Consequences of Chromosomal Targeting by CRISPR-Cas Systems". Journal of Bacteriology 198, n.º 10 (29 de febrero de 2016): 1481–86. http://dx.doi.org/10.1128/jb.00086-16.
Texto completoWang, Kai y Chun Liang. "CRF: detection of CRISPR arrays using random forest". PeerJ 5 (25 de abril de 2017): e3219. http://dx.doi.org/10.7717/peerj.3219.
Texto completoChaturvedi, Sarika y Jinny Tomar. "CRISPR/CAS 9 Mediated Treatment for UTIs". International Journal for Modern Trends in Science and Technology 6, n.º 5 (31 de mayo de 2020): 82–94. http://dx.doi.org/10.46501/ijmtst060515.
Texto completoCady, K. C., A. S. White, J. H. Hammond, M. D. Abendroth, R. S. G. Karthikeyan, P. Lalitha, M. E. Zegans y G. A. O'Toole. "Prevalence, conservation and functional analysis of Yersinia and Escherichia CRISPR regions in clinical Pseudomonas aeruginosa isolates". Microbiology 157, n.º 2 (1 de febrero de 2011): 430–37. http://dx.doi.org/10.1099/mic.0.045732-0.
Texto completoGrainy, Julie, Sandra Garrett, Brenton R. Graveley y Michael P. Terns. "CRISPR repeat sequences and relative spacing specify DNA integration by Pyrococcus furiosus Cas1 and Cas2". Nucleic Acids Research 47, n.º 14 (20 de junio de 2019): 7518–31. http://dx.doi.org/10.1093/nar/gkz548.
Texto completoRezzonico, Fabio, Theo H. M. Smits y Brion Duffy. "Diversity, Evolution, and Functionality of Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Regions in the Fire Blight Pathogen Erwinia amylovora". Applied and Environmental Microbiology 77, n.º 11 (1 de abril de 2011): 3819–29. http://dx.doi.org/10.1128/aem.00177-11.
Texto completoZhang, Xinfu, Sandra Garrett, Brenton R. Graveley y Michael P. Terns. "Unique properties of spacer acquisition by the type III-A CRISPR-Cas system". Nucleic Acids Research 50, n.º 3 (10 de diciembre de 2021): 1562–82. http://dx.doi.org/10.1093/nar/gkab1193.
Texto completoKim, Jenny G., Sandra Garrett, Yunzhou Wei, Brenton R. Graveley y Michael P. Terns. "CRISPR DNA elements controlling site-specific spacer integration and proper repeat length by a Type II CRISPR–Cas system". Nucleic Acids Research 47, n.º 16 (8 de agosto de 2019): 8632–48. http://dx.doi.org/10.1093/nar/gkz677.
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