Artículos de revistas sobre el tema "Algorithms- Protein"
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Hulianytskyi, Leonid y Sergii Chornozhuk. "Genetic Algorithm with New Stochastic Greedy Crossover Operator for Protein Structure Folding Problem". Cybernetics and Computer Technologies, n.º 2 (24 de julio de 2020): 19–29. http://dx.doi.org/10.34229/2707-451x.20.2.3.
Texto completoCavanaugh, David y Krishnan Chittur. "A hydrophobic proclivity index for protein alignments". F1000Research 4 (21 de octubre de 2015): 1097. http://dx.doi.org/10.12688/f1000research.6348.1.
Texto completoCavanaugh, David y Krishnan Chittur. "A hydrophobic proclivity index for protein alignments". F1000Research 4 (15 de octubre de 2020): 1097. http://dx.doi.org/10.12688/f1000research.6348.2.
Texto completoBegleiter, R., R. El-Yaniv y G. Yona. "On Prediction Using Variable Order Markov Models". Journal of Artificial Intelligence Research 22 (1 de diciembre de 2004): 385–421. http://dx.doi.org/10.1613/jair.1491.
Texto completoMoschopoulos, Charalampos, Grigorios Beligiannis, Spiridon Likothanassis y Sophia Kossida. "Using a Genetic Algorithm and Markov Clustering on Protein–Protein Interaction Graphs". International Journal of Systems Biology and Biomedical Technologies 1, n.º 2 (abril de 2012): 35–47. http://dx.doi.org/10.4018/ijsbbt.2012040103.
Texto completoWang, Derui y Jingyu Hou. "Explore the hidden treasure in protein–protein interaction networks — An iterative model for predicting protein functions". Journal of Bioinformatics and Computational Biology 13, n.º 05 (octubre de 2015): 1550026. http://dx.doi.org/10.1142/s0219720015500262.
Texto completoDandekar, Thomas y Patrick Argos. "Potential of genetic algorithms in protein folding and protein engineering simulations". "Protein Engineering, Design and Selection" 5, n.º 7 (1992): 637–45. http://dx.doi.org/10.1093/protein/5.7.637.
Texto completoGainza, Pablo, Hunter M. Nisonoff y Bruce R. Donald. "Algorithms for protein design". Current Opinion in Structural Biology 39 (agosto de 2016): 16–26. http://dx.doi.org/10.1016/j.sbi.2016.03.006.
Texto completoBrown, Michael Scott, Tommy Bennett y James A. Coker. "Niche Genetic Algorithms are better than traditional Genetic Algorithms for de novo Protein Folding". F1000Research 3 (7 de octubre de 2014): 236. http://dx.doi.org/10.12688/f1000research.5412.1.
Texto completoKhatami, Mohammad Hassan, Udson C. Mendes, Nathan Wiebe y Philip M. Kim. "Gate-based quantum computing for protein design". PLOS Computational Biology 19, n.º 4 (12 de abril de 2023): e1011033. http://dx.doi.org/10.1371/journal.pcbi.1011033.
Texto completoLappe, M. y L. Holm. "Algorithms for protein interaction networks". Biochemical Society Transactions 33, n.º 3 (1 de junio de 2005): 530–34. http://dx.doi.org/10.1042/bst0330530.
Texto completoShirmohammady, Naeem, Habib Izadkhah y Ayaz Isazadeh. "PPI-GA: A Novel Clustering Algorithm to Identify Protein Complexes within Protein-Protein Interaction Networks Using Genetic Algorithm". Complexity 2021 (25 de marzo de 2021): 1–14. http://dx.doi.org/10.1155/2021/2132516.
Texto completoDERONNE, KEVIN W. y GEORGE KARYPIS. "EFFECTIVE OPTIMIZATION ALGORITHMS FOR FRAGMENT-ASSEMBLY BASED PROTEIN STRUCTURE PREDICTION". Journal of Bioinformatics and Computational Biology 05, n.º 02a (abril de 2007): 335–52. http://dx.doi.org/10.1142/s0219720007002618.
Texto completoCHUA, HON NIAN, KANG NING, WING-KIN SUNG, HON WAI LEONG y LIMSOON WONG. "USING INDIRECT PROTEIN–PROTEIN INTERACTIONS FOR PROTEIN COMPLEX PREDICTION". Journal of Bioinformatics and Computational Biology 06, n.º 03 (junio de 2008): 435–66. http://dx.doi.org/10.1142/s0219720008003497.
Texto completoRuiz Echartea, Maria Elisa, Isaure Chauvot de Beauchêne y David W. Ritchie. "EROS-DOCK: protein–protein docking using exhaustive branch-and-bound rotational search". Bioinformatics 35, n.º 23 (24 de mayo de 2019): 5003–10. http://dx.doi.org/10.1093/bioinformatics/btz434.
Texto completoDunham, Brandan y Madhavi K. Ganapathiraju. "Benchmark Evaluation of Protein–Protein Interaction Prediction Algorithms". Molecules 27, n.º 1 (22 de diciembre de 2021): 41. http://dx.doi.org/10.3390/molecules27010041.
Texto completoVreven, Thom, Howook Hwang y Zhiping Weng. "Exploring Angular Distance in Protein-Protein Docking Algorithms". PLoS ONE 8, n.º 2 (21 de febrero de 2013): e56645. http://dx.doi.org/10.1371/journal.pone.0056645.
Texto completoHallen, Mark A. y Bruce R. Donald. "Protein design by provable algorithms". Communications of the ACM 62, n.º 10 (24 de septiembre de 2019): 76–84. http://dx.doi.org/10.1145/3338124.
Texto completoArriagada, Mauricio y Aleksandar Poleksic. "On the Difference in Quality between Current Heuristic and Optimal Solutions to the Protein Structure Alignment Problem". BioMed Research International 2013 (2013): 1–8. http://dx.doi.org/10.1155/2013/459248.
Texto completoSánchez-Hernández, Juan P., Juan Frausto-Solís, Juan J. González-Barbosa, Diego A. Soto-Monterrubio, Fanny G. Maldonado-Nava y Guadalupe Castilla-Valdez. "A Peptides Prediction Methodology for Tertiary Structure Based on Simulated Annealing". Mathematical and Computational Applications 26, n.º 2 (29 de abril de 2021): 39. http://dx.doi.org/10.3390/mca26020039.
Texto completoSOHAEE, NASSIM y CHRISTIAN V. FORST. "IDENTIFICATION OF FUNCTIONAL MODULES IN A PPI NETWORK BY BOUNDED DIAMETER CLUSTERING". Journal of Bioinformatics and Computational Biology 08, n.º 06 (diciembre de 2010): 929–43. http://dx.doi.org/10.1142/s0219720010005221.
Texto completoWang, Fengjuan, Cheng Xu, Shufeng Jiang y Fengxia Xu. "Application of improved intelligent ant colony algorithm in protein folding prediction". Journal of Algorithms & Computational Technology 14 (enero de 2020): 174830262094141. http://dx.doi.org/10.1177/1748302620941411.
Texto completoKumar, Ashish, Roheet Bhatnagar, Sumit Srivastava y Arjun Chauhan. "Comparative Prediction of Wine Quality and Protein Synthesis Using ARSkNN". International Journal of Information Technology Project Management 11, n.º 4 (octubre de 2020): 31–41. http://dx.doi.org/10.4018/ijitpm.2020100103.
Texto completoWu, Hongjie, Haiou Li, Min Jiang, Cheng Chen, Qiang Lv y Chuang Wu. "Identify High-Quality Protein Structural Models by EnhancedK-Means". BioMed Research International 2017 (2017): 1–9. http://dx.doi.org/10.1155/2017/7294519.
Texto completoYE, JIEPING, RAVI JANARDAN y SONGTAO LIU. "PAIRWISE PROTEIN STRUCTURE ALIGNMENT BASED ON AN ORIENTATION-INDEPENDENT BACKBONE REPRESENTATION". Journal of Bioinformatics and Computational Biology 02, n.º 04 (diciembre de 2004): 699–717. http://dx.doi.org/10.1142/s021972000400082x.
Texto completoKotelnikova, Ekaterina, Klaus M. Frahm, Dima L. Shepelyansky y Oksana Kunduzova. "Fibrosis Protein-Protein Interactions from Google Matrix Analysis of MetaCore Network". International Journal of Molecular Sciences 23, n.º 1 (22 de diciembre de 2021): 67. http://dx.doi.org/10.3390/ijms23010067.
Texto completoWesthead, D. R., V. P. Collura, M. D. Eldridge, M. A. Firth, J. Li y C. W. Murray. "Protein fold recognition by threading: comparison of algorithms and analysis of results". "Protein Engineering, Design and Selection" 8, n.º 12 (1995): 1197–204. http://dx.doi.org/10.1093/protein/8.12.1197.
Texto completoDUKKA BAHADUR, K. C., ETSUJI TOMITA, JUN'ICHI SUZUKI y TATSUYA AKUTSU. "PROTEIN SIDE-CHAIN PACKING PROBLEM: A MAXIMUM EDGE-WEIGHT CLIQUE ALGORITHMIC APPROACH". Journal of Bioinformatics and Computational Biology 03, n.º 01 (febrero de 2005): 103–26. http://dx.doi.org/10.1142/s0219720005000904.
Texto completoLin, Guohui, Dong Xu, Zhi-Zhong Chen, Tao Jiang, Jianjun Wen y Ying Xu. "Computational Assignment of Protein Backbone NMR Peaks by Efficient Bounding and Filtering". Journal of Bioinformatics and Computational Biology 01, n.º 02 (julio de 2003): 387–409. http://dx.doi.org/10.1142/s0219720003000083.
Texto completoSunny, Sharon y P. B. Jayaraj. "A Geometric Complementarity-Based Tool for Protein–Protein Docking". Journal of Computational Biophysics and Chemistry 21, n.º 01 (9 de diciembre de 2021): 35–46. http://dx.doi.org/10.1142/s273741652250003x.
Texto completoLo, Victor L., Richard L. Kingston y Rick P. Millane. "Iterative projection algorithms in protein crystallography. II. Application". Acta Crystallographica Section A Foundations and Advances 71, n.º 4 (6 de junio de 2015): 451–59. http://dx.doi.org/10.1107/s2053273315005574.
Texto completoPatrick, W. M., A. E. Firth y J. M. Blackburn. "User-friendly algorithms for estimating completeness and diversity in randomized protein-encoding libraries". Protein Engineering Design and Selection 16, n.º 6 (1 de junio de 2003): 451–57. http://dx.doi.org/10.1093/protein/gzg057.
Texto completoShen, Li, Jian Zhang, Fang Wang y Kai Liu. "Predicting Essential Proteins Based on Integration of Local Fuzzy Fractal Dimension and Subcellular Location Information". Genes 13, n.º 2 (19 de enero de 2022): 173. http://dx.doi.org/10.3390/genes13020173.
Texto completoHuang, Chien-Hung, Huai-Shun Peng y Ka-Lok Ng. "Prediction of Cancer Proteins by Integrating Protein Interaction, Domain Frequency, and Domain Interaction Data Using Machine Learning Algorithms". BioMed Research International 2015 (2015): 1–15. http://dx.doi.org/10.1155/2015/312047.
Texto completoHelles, Glennie. "A comparative study of the reported performance of ab initio protein structure prediction algorithms". Journal of The Royal Society Interface 5, n.º 21 (11 de diciembre de 2007): 387–96. http://dx.doi.org/10.1098/rsif.2007.1278.
Texto completoHung, Che-Lun y Yaw-Ling Lin. "Implementation of a Parallel Protein Structure Alignment Service on Cloud". International Journal of Genomics 2013 (2013): 1–8. http://dx.doi.org/10.1155/2013/439681.
Texto completoBERGER, BONNIE. "Algorithms for Protein Structural Motif Recognition". Journal of Computational Biology 2, n.º 1 (enero de 1995): 125–38. http://dx.doi.org/10.1089/cmb.1995.2.125.
Texto completoCherfils, Jacqueline y Joël Janin. "Protein docking algorithms: simulating molecular recognition". Current Opinion in Structural Biology 3, n.º 2 (abril de 1993): 265–69. http://dx.doi.org/10.1016/s0959-440x(05)80162-9.
Texto completoPedersen, Jan T. y John Moult. "Genetic algorithms for protein structure prediction". Current Opinion in Structural Biology 6, n.º 2 (abril de 1996): 227–31. http://dx.doi.org/10.1016/s0959-440x(96)80079-0.
Texto completoPoleksic, Aleksandar. "Algorithms for optimal protein structure alignment". Bioinformatics 25, n.º 21 (4 de septiembre de 2009): 2751–56. http://dx.doi.org/10.1093/bioinformatics/btp530.
Texto completoUnger, Ron y John Moult. "Genetic Algorithms for Protein Folding Simulations". Journal of Molecular Biology 231, n.º 1 (mayo de 1993): 75–81. http://dx.doi.org/10.1006/jmbi.1993.1258.
Texto completoOakley, Aaron J. "Hidden Glutathione Transferases in the Human Genome". Biomolecules 13, n.º 8 (12 de agosto de 2023): 1240. http://dx.doi.org/10.3390/biom13081240.
Texto completoCaliandro, Rocco, Benedetta Carrozzini, Giovanni Luca Cascarano, Giuliana Comunale, Carmelo Giacovazzo y Annamaria Mazzone. "Protein phasing at non-atomic resolution by combining Patterson andVLDtechniques". Acta Crystallographica Section D Biological Crystallography 70, n.º 7 (29 de junio de 2014): 1994–2006. http://dx.doi.org/10.1107/s139900471401013x.
Texto completoKumar, Nilesh y M. Shahid Mukhtar. "Ranking Plant Network Nodes Based on Their Centrality Measures". Entropy 25, n.º 4 (18 de abril de 2023): 676. http://dx.doi.org/10.3390/e25040676.
Texto completoLiang, Zhengping, Rui Guo, Jiangtao Sun, Zhong Ming y Zexuan Zhu. "Orderly Roulette Selection Based Ant Colony Algorithm for Hierarchical Multilabel Protein Function Prediction". Mathematical Problems in Engineering 2017 (2017): 1–15. http://dx.doi.org/10.1155/2017/6320273.
Texto completoZahiri, Javad, Joseph Bozorgmehr y Ali Masoudi-Nejad. "Computational Prediction of Protein–Protein Interaction Networks: Algorithms and Resources". Current Genomics 14, n.º 6 (1 de septiembre de 2013): 397–414. http://dx.doi.org/10.2174/1389202911314060004.
Texto completoCHANG, DARBY TIEN-HAO, JUNG-HSIN LIN, CHIH-HUNG HSIEH y YEN-JENG OYANG. "ON THE DESIGN OF OPTIMIZATION ALGORITHMS FOR PREDICTION OF MOLECULAR INTERACTIONS". International Journal on Artificial Intelligence Tools 19, n.º 03 (junio de 2010): 267–80. http://dx.doi.org/10.1142/s0218213010000182.
Texto completoAl-hussaniy, Hany Akeel. "The development of molecular docking and molecular dynamics and their application in the field of chemistry and computer simulation". Journal of medical pharmaceutical and allied sciences 12, n.º 1 (31 de enero de 2023): 5552–62. http://dx.doi.org/10.55522/jmpas.v12i1.4137.
Texto completoSerackis, Artūras, Dalius Matuzevičius, Dalius Navakauskas, Eldar Šabanovič, Andrius Katkevičius y Darius Plonis. "A Robust Identification of the Protein Standard Bands in Two-Dimensional Electrophoresis Gel Images". Electrical, Control and Communication Engineering 13, n.º 1 (1 de diciembre de 2017): 63–68. http://dx.doi.org/10.1515/ecce-2017-0009.
Texto completoMin, Seonwoo, HyunGi Kim, Byunghan Lee y Sungroh Yoon. "Protein transfer learning improves identification of heat shock protein families". PLOS ONE 16, n.º 5 (18 de mayo de 2021): e0251865. http://dx.doi.org/10.1371/journal.pone.0251865.
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