Artículos de revistas sobre el tema "16S rRNA profiling"
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Nakayama, Jiro. "Pyrosequence-Based 16S rRNA Profiling of Gastro-Intestinal Microbiota". Bioscience and Microflora 29, n.º 2 (2010): 83–96. http://dx.doi.org/10.12938/bifidus.29.83.
Texto completoCuscó, Anna, Carlotta Catozzi, Joaquim Viñes, Armand Sanchez y Olga Francino. "Microbiota profiling with long amplicons using Nanopore sequencing: full-length 16S rRNA gene and whole rrn operon". F1000Research 7 (6 de noviembre de 2018): 1755. http://dx.doi.org/10.12688/f1000research.16817.1.
Texto completoRampelotto, Pabulo H., Aline F. R. Sereia, Luiz Felipe V. de Oliveira y Rogério Margis. "Exploring the Hospital Microbiome by High-Resolution 16S rRNA Profiling". International Journal of Molecular Sciences 20, n.º 12 (25 de junio de 2019): 3099. http://dx.doi.org/10.3390/ijms20123099.
Texto completoKim, Hyojung, Sora Kim y Sungwon Jung. "Instruction of microbiome taxonomic profiling based on 16S rRNA sequencing". Journal of Microbiology 58, n.º 3 (27 de febrero de 2020): 193–205. http://dx.doi.org/10.1007/s12275-020-9556-y.
Texto completoCuscó, Anna, Carlotta Catozzi, Joaquim Viñes, Armand Sanchez y Olga Francino. "Microbiota profiling with long amplicons using Nanopore sequencing: full-length 16S rRNA gene and the 16S-ITS-23S of the rrn operon". F1000Research 7 (1 de agosto de 2019): 1755. http://dx.doi.org/10.12688/f1000research.16817.2.
Texto completoHiibel, Sage R., Amy Pruden, Barbara Crimi y Kenneth F. Reardon. "Active community profiling via capillary electrophoresis single-strand conformation polymorphism analysis of amplified 16S rRNA and 16S rRNA genes". Journal of Microbiological Methods 83, n.º 3 (diciembre de 2010): 286–90. http://dx.doi.org/10.1016/j.mimet.2010.10.002.
Texto completoSulaiman, Imran, Benjamin G. Wu, Yonghua Li, Jun-Chieh Tsay, Maya Sauthoff, Adrienne S. Scott, Kun Ji et al. "Functional lower airways genomic profiling of the microbiome to capture active microbial metabolism". European Respiratory Journal 58, n.º 1 (14 de enero de 2021): 2003434. http://dx.doi.org/10.1183/13993003.03434-2020.
Texto completoGu, F., Y. Li, C. Zhou, D. T. W. Wong, C. M. Ho, F. Qi y W. Shi. "Bacterial 16S rRNA/rDNA Profiling in the Liquid Phase of Human Saliva". Open Dentistry Journal 3, n.º 1 (28 de abril de 2009): 80–84. http://dx.doi.org/10.2174/1874210600903010080.
Texto completoWade, W. G. y E. M. Prosdocimi. "Profiling of Oral Bacterial Communities". Journal of Dental Research 99, n.º 6 (14 de abril de 2020): 621–29. http://dx.doi.org/10.1177/0022034520914594.
Texto completovan den Bogert, Bartholomeus, Willem M. de Vos, Erwin G. Zoetendal y Michiel Kleerebezem. "Microarray Analysis and Barcoded Pyrosequencing Provide Consistent Microbial Profiles Depending on the Source of Human Intestinal Samples". Applied and Environmental Microbiology 77, n.º 6 (21 de enero de 2011): 2071–80. http://dx.doi.org/10.1128/aem.02477-10.
Texto completoMancabelli, Leonardo, Christian Milani, Gabriele Andrea Lugli, Federico Fontana, Francesca Turroni, Douwe van Sinderen y Marco Ventura. "The Impact of Primer Design on Amplicon-Based Metagenomic Profiling Accuracy: Detailed Insights into Bifidobacterial Community Structure". Microorganisms 8, n.º 1 (17 de enero de 2020): 131. http://dx.doi.org/10.3390/microorganisms8010131.
Texto completoGirija, D., P. K. Rajeevan, Swathi Balakrishnan, P. S. Panchami y Mahesh Mohan. "16S rRNA gene taxonomic profiling of endophytic bacteria associated with phylaenopsis roots". Journal of Horticultural Sciences 13, n.º 1 (30 de junio de 2018): 103–7. http://dx.doi.org/10.24154/jhs.2018.v13i01.012.
Texto completoKim, J. Y., M. H. Yi, Y. Hwang, J. Y. Lee, I. Y. Lee, D. Yong y T. S. Yong. "16S rRNA profiling of the Dermatophagoides farinae core microbiome: Enterococcus and Bartonella". Clinical & Experimental Allergy 48, n.º 5 (25 de marzo de 2018): 607–10. http://dx.doi.org/10.1111/cea.13104.
Texto completoLangille, Morgan G. I., Jesse Zaneveld, J. Gregory Caporaso, Daniel McDonald, Dan Knights, Joshua A. Reyes, Jose C. Clemente et al. "Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences". Nature Biotechnology 31, n.º 9 (25 de agosto de 2013): 814–21. http://dx.doi.org/10.1038/nbt.2676.
Texto completoMerkel, A. Yu, I. Yu Tarnovetskii, O. A. Podosokorskaya y S. V. Toshchakov. "Analysis of 16S rRNA Primer Systems for Profiling of Thermophilic Microbial Communities". Microbiology 88, n.º 6 (noviembre de 2019): 671–80. http://dx.doi.org/10.1134/s0026261719060110.
Texto completoGupta, Ayushi y Suresh Nair. "Pseudomonas-specific 16S rRNA insect gut-microbiome profiling using next-generation sequencing". STAR Protocols 4, n.º 1 (marzo de 2023): 101941. http://dx.doi.org/10.1016/j.xpro.2022.101941.
Texto completoBonfantine, Krista L., Stacey M. Trevathan-Tackett, Ty G. Matthews, Ana Neckovic y Han Ming Gan. "Dumpster diving for diatom plastid 16S rRNA genes". PeerJ 9 (1 de julio de 2021): e11576. http://dx.doi.org/10.7717/peerj.11576.
Texto completoLiu, B. Y., Z. Y. Wang, H. R. Wang, P. Hu, D. Xu y Q. Wang. "Molecular profiling of bacterial species in the geese cecum". Czech Journal of Animal Science 56, No. 4 (5 de abril de 2011): 192–203. http://dx.doi.org/10.17221/1433-cjas.
Texto completoCallahan, Benjamin J., Joan Wong, Cheryl Heiner, Steve Oh, Casey M. Theriot, Ajay S. Gulati, Sarah K. McGill y Michael K. Dougherty. "High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution". Nucleic Acids Research 47, n.º 18 (3 de julio de 2019): e103-e103. http://dx.doi.org/10.1093/nar/gkz569.
Texto completoZhang, Hui, Xiangdan Yu, Zhe Zhang, Zhenhua Liu, Cong Tang, Kun Zhao, Shiyan Liu et al. "Nanoliter-scale next-generation sequencing library-mediated high-throughput 16S rRNA microbial community profiling". BioTechniques 68, n.º 4 (abril de 2020): 204–10. http://dx.doi.org/10.2144/btn-2019-0102.
Texto completoLee, Se-Hui, Hye-Jin Ku, Min-Ju Ahn, Ji-Sang Hong, Se Hee Lee, Hakdong Shin, Keun Chul Lee et al. "Weissella jogaejeotgali sp. nov., isolated from jogae jeotgal, a traditional Korean fermented seafood". International Journal of Systematic and Evolutionary Microbiology 65, Pt_12 (1 de diciembre de 2015): 4674–81. http://dx.doi.org/10.1099/ijsem.0.000631.
Texto completoOyewusi, Habeebat Adekilekun, Roswanira Abdul Wahab, Mohamed Faraj Edbeib, Mohd Azrul Naim Mohamad, Azzmer Azzar Abdul Hamid, Yilmaz Kaya y Fahrul Huyop. "Functional profiling of bacterial communities in Lake Tuz using 16S rRNA gene sequences". Biotechnology & Biotechnological Equipment 35, n.º 1 (31 de octubre de 2020): 1–10. http://dx.doi.org/10.1080/13102818.2020.1840437.
Texto completoLimayem, Alya, Andrew Micciche, Bina Nayak y Shyam Mohapatra. "Prokaryotic community profiling of local algae wastewaters using advanced 16S rRNA gene sequencing". Environmental Science and Pollution Research 25, n.º 1 (23 de octubre de 2017): 704–11. http://dx.doi.org/10.1007/s11356-017-0078-z.
Texto completoKorenori, Yuki, Jiahui Jiang y Jiro Nakayama. "Current status and problems of 16S rRNA pyrosequencing- based profiling of gastro-intestinal microbiota". Japanese Journal of Lactic Acid Bacteria 23, n.º 1 (2012): 24–34. http://dx.doi.org/10.4109/jslab.23.24.
Texto completoAbundo, Michael E. C., John M. Ngunjiri, Kara J. M. Taylor, Hana Ji, Amir Ghorbani, Mahesh K. C., Bonnie P. Weber, Timothy J. Johnson y Chang-Won Lee. "Assessment of two DNA extraction kits for profiling poultry respiratory microbiota from multiple sample types". PLOS ONE 16, n.º 1 (6 de enero de 2021): e0241732. http://dx.doi.org/10.1371/journal.pone.0241732.
Texto completoWang, Yin, Rudong Li, Yuhua Zhou, Zongxin Ling, Xiaokui Guo, Lu Xie y Lei Liu. "Motif-Based Text Mining of Microbial Metagenome Redundancy Profiling Data for Disease Classification". BioMed Research International 2016 (2016): 1–11. http://dx.doi.org/10.1155/2016/6598307.
Texto completoRamlal, P. S., J. Lin, C. A. Buckley, T. A. Stenström, I. D. Amoah, M. Okpeku, A. Kanzi y V. Ramsuran. "16S rRNA-based metagenomic profiling of microbes on contact surfaces within shared sanitation facilities". Ecological Genetics and Genomics 21 (diciembre de 2021): 100095. http://dx.doi.org/10.1016/j.egg.2021.100095.
Texto completoChen, Wei, Yongmei Cheng, Clarence Zhang, Shaowu Zhang y Hongyu Zhao. "MSClust: A Multi-Seeds based Clustering algorithm for microbiome profiling using 16S rRNA sequence". Journal of Microbiological Methods 94, n.º 3 (septiembre de 2013): 347–55. http://dx.doi.org/10.1016/j.mimet.2013.07.004.
Texto completoDe Filippis, Francesca, Eugenio Parente, Teresa Zotta y Danilo Ercolini. "A comparison of bioinformatic approaches for 16S rRNA gene profiling of food bacterial microbiota". International Journal of Food Microbiology 265 (enero de 2018): 9–17. http://dx.doi.org/10.1016/j.ijfoodmicro.2017.10.028.
Texto completoKim, Minseok y Zhongtang Yu. "Variations in 16S rRNA-based microbiome profiling between pyrosequencing runs and between pyrosequencing facilities". Journal of Microbiology 52, n.º 5 (11 de abril de 2014): 355–65. http://dx.doi.org/10.1007/s12275-014-3443-3.
Texto completoSong, Yun Gyu, Sang Gun Shim, Kwang Min Kim, Dong-Hae Lee, Dae-Soo Kim, Sang-Haeng Choi, Jae-Young Song et al. "Profiling of the bacteria responsible for pyogenic liver abscess by 16S rRNA gene pyrosequencing". Journal of Microbiology 52, n.º 6 (29 de mayo de 2014): 504–9. http://dx.doi.org/10.1007/s12275-014-4241-7.
Texto completoNold, Stephen C., Joseph B. Pangborn, Heidi A. Zajack, Scott T. Kendall, Richard R. Rediske y Bopaiah A. Biddanda. "Benthic Bacterial Diversity in Submerged Sinkhole Ecosystems". Applied and Environmental Microbiology 76, n.º 1 (30 de octubre de 2009): 347–51. http://dx.doi.org/10.1128/aem.01186-09.
Texto completoSong, Ying, Dongze Lu, Honggang Wang, Zhenyi Zhou, Xian Luo, Manjing Ma, Songze Ke, Hong Wang, Yanlei Yu y Bin Wei. "Metagenomic Insights into the Anti-Obesity Effect of a Polysaccharide from Saccharina japonica". Foods 12, n.º 3 (3 de febrero de 2023): 665. http://dx.doi.org/10.3390/foods12030665.
Texto completoFisunov, G. Yu, D. V. Evsyutina, A. A. Arzamasov, I. O. Butenko y V. M. Govorun. "Profiling of Mycoplasma gallisepticum Ribosomes". Acta Naturae 7, n.º 4 (15 de diciembre de 2015): 107–12. http://dx.doi.org/10.32607/20758251-2015-7-4-107-112.
Texto completoOng, Seeu Si, Jia Xu, Choon Kiat Sim, Alexis Jiaying Khng, Peh Joo Ho, Philip Kam Weng Kwan, Aarthi Ravikrishnan et al. "Profiling Microbial Communities in Idiopathic Granulomatous Mastitis". International Journal of Molecular Sciences 24, n.º 2 (5 de enero de 2023): 1042. http://dx.doi.org/10.3390/ijms24021042.
Texto completoDitz, Benedikt, Stephanie Christenson, John Rossen, Chris Brightling, Huib A. M. Kerstjens, Maarten van den Berge y Alen Faiz. "Sputum microbiome profiling in COPD: beyond singular pathogen detection". Thorax 75, n.º 4 (29 de enero de 2020): 338–44. http://dx.doi.org/10.1136/thoraxjnl-2019-214168.
Texto completoHu, Anyi, Nianzhi Jiao, Rui Zhang y Zao Yang. "Niche Partitioning of Marine Group I Crenarchaeota in the Euphotic and Upper Mesopelagic Zones of the East China Sea". Applied and Environmental Microbiology 77, n.º 21 (26 de agosto de 2011): 7469–78. http://dx.doi.org/10.1128/aem.00294-11.
Texto completoEzeoke, Ifeoma, Hans-Peter Klenk, Gabriele Pötter, Peter Schumann, Ben D. Moser, Brent A. Lasker, Ainsley Nicholson y June M. Brown. "Nocardia amikacinitolerans sp. nov., an amikacin-resistant human pathogen". International Journal of Systematic and Evolutionary Microbiology 63, Pt_3 (1 de marzo de 2013): 1056–61. http://dx.doi.org/10.1099/ijs.0.039990-0.
Texto completoMarkusková, Barbora, Jana Minarovičová, Adriana Véghová, Hana Drahovská y Eva Kaclíková. "Impact of DNA extraction methods on 16S rRNA-based profiling of bacterial communities in cheese". Journal of Microbiological Methods 184 (mayo de 2021): 106210. http://dx.doi.org/10.1016/j.mimet.2021.106210.
Texto completoHan, Dongsheng, Peng Gao, Rui Li, Ping Tan, Jiehong Xie, Rui Zhang y Jinming Li. "Multicenter assessment of microbial community profiling using 16S rRNA gene sequencing and shotgun metagenomic sequencing". Journal of Advanced Research 26 (noviembre de 2020): 111–21. http://dx.doi.org/10.1016/j.jare.2020.07.010.
Texto completoFrolov, Evgenii N., Alexandra V. Gololobova, Alexandra A. Klyukina, Elizaveta A. Bonch-Osmolovskaya, Nikolay V. Pimenov, Nikolay A. Chernyh y Alexander Y. Merkel. "Diversity and Activity of Sulfate-Reducing Prokaryotes in Kamchatka Hot Springs". Microorganisms 9, n.º 10 (1 de octubre de 2021): 2072. http://dx.doi.org/10.3390/microorganisms9102072.
Texto completoMutignani, Massimiliano, Roberto Penagini, Giorgio Gargari, Simone Guglielmetti, Marcello Cintolo, Aldo Airoldi, Pierfrancesco Leone et al. "Blood Bacterial DNA Load and Profiling Differ in Colorectal Cancer Patients Compared to Tumor-Free Controls". Cancers 13, n.º 24 (18 de diciembre de 2021): 6363. http://dx.doi.org/10.3390/cancers13246363.
Texto completoSantiago-Rodriguez, Tasha M., Aaron Garoutte, Emmase Adams, Waleed Nasser, Matthew C. Ross, Alex La Reau, Zachariah Henseler et al. "Metagenomic Information Recovery from Human Stool Samples Is Influenced by Sequencing Depth and Profiling Method". Genes 11, n.º 11 (21 de noviembre de 2020): 1380. http://dx.doi.org/10.3390/genes11111380.
Texto completoMurovec, Boštjan, Leon Deutsch y Blaž Stres. "General Unified Microbiome Profiling Pipeline (GUMPP) for Large Scale, Streamlined and Reproducible Analysis of Bacterial 16S rRNA Data to Predicted Microbial Metagenomes, Enzymatic Reactions and Metabolic Pathways". Metabolites 11, n.º 6 (24 de mayo de 2021): 336. http://dx.doi.org/10.3390/metabo11060336.
Texto completoPesapane, Risa, Andrea Chaves, Janet Foley, Nadia Javeed, Samantha Barnum, Katherine Greenwald, Erin Dodd et al. "Nasopulmonary mites (Acari: Halarachnidae) as potential vectors of bacterial pathogens, including Streptococcus phocae, in marine mammals". PLOS ONE 17, n.º 6 (16 de junio de 2022): e0270009. http://dx.doi.org/10.1371/journal.pone.0270009.
Texto completoNishizawa, Tomoyasu, Yasuko Neagari, Takamasa Miura, Munehiko Asayama, Koichi Murata, Ken-Ichi Harada y Makoto Shirai. "Molecular Analysis of the Cyanobacterial Community in Gastric Contents of Egrets with Symptoms of Steatitis". Open Microbiology Journal 9, n.º 1 (3 de noviembre de 2015): 160–66. http://dx.doi.org/10.2174/1874285801509010160.
Texto completoThomas, Pious y Christopher M. M. Franco. "Intracellular Bacteria in Plants: Elucidation of Abundant and Diverse Cytoplasmic Bacteria in Healthy Plant Cells Using In Vitro Cell and Callus Cultures". Microorganisms 9, n.º 2 (28 de enero de 2021): 269. http://dx.doi.org/10.3390/microorganisms9020269.
Texto completoYen, Sandi, Jethro Johnson y Nicholas E. Ilott. "Streamlined processing and analysis of 16S rRNA amplicon sequencing data with OCMS_16S and OCMSlooksy". Wellcome Open Research 7 (23 de febrero de 2022): 68. http://dx.doi.org/10.12688/wellcomeopenres.17632.1.
Texto completoDing, N. S., J. A. K. McDonald, A. Perdones-Montero, Douglas N. Rees, S. O. Adegbola, R. Misra, P. Hendy et al. "Metabonomics and the Gut Microbiome Associated With Primary Response to Anti-TNF Therapy in Crohn’s Disease". Journal of Crohn's and Colitis 14, n.º 8 (2 de marzo de 2020): 1090–102. http://dx.doi.org/10.1093/ecco-jcc/jjaa039.
Texto completoLagkouvardos, Ilias, Sandra Fischer, Neeraj Kumar y Thomas Clavel. "Rhea: a transparent and modular R pipeline for microbial profiling based on 16S rRNA gene amplicons". PeerJ 5 (11 de enero de 2017): e2836. http://dx.doi.org/10.7717/peerj.2836.
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