Academic literature on the topic 'Watson-Crick'
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Journal articles on the topic "Watson-Crick"
Fong, Wan Heng, Aqilahfarhana Abdul Rahman, Nor Haniza Sarmin, and Sherzod Turaev. "Static Watson-Crick Context-Free Grammars." International Journal of Online and Biomedical Engineering (iJOE) 15, no. 10 (June 27, 2019): 65. http://dx.doi.org/10.3991/ijoe.v15i10.10878.
Full textAbdul Rahman, Aqilahfarhana, Wan Heng Fong, Nor Haniza Sarmin, Sherzod Turaev, and Nurul Liyana Mohamad Zulkufli. "Static Watson-Crick regular grammar." Malaysian Journal of Fundamental and Applied Sciences 14 (October 25, 2018): 457–62. http://dx.doi.org/10.11113/mjfas.v14n0.1282.
Full textFong, Wan Heng, Aqilahfarhana Abdul Rahman, Nor Haniza Sarmin, and Sherzod Turaev. "Computational Power of Static Watson-Crick Context-free Grammars." Science Proceedings Series 1, no. 2 (April 24, 2019): 82–85. http://dx.doi.org/10.31580/sps.v1i2.679.
Full textRangadurai, Atul, Eric S. Szymanski, Isaac Kimsey, Honglue Shi, and Hashim M. Al-Hashimi. "Probing conformational transitions towards mutagenic Watson–Crick-like G·T mismatches using off-resonance sugar carbon R1ρ relaxation dispersion." Journal of Biomolecular NMR 74, no. 8-9 (August 12, 2020): 457–71. http://dx.doi.org/10.1007/s10858-020-00337-7.
Full textKARI, LILA, and KALPANA MAHALINGAM. "WATSON-CRICK BORDERED WORDS AND THEIR SYNTACTIC MONOID." International Journal of Foundations of Computer Science 19, no. 05 (October 2008): 1163–79. http://dx.doi.org/10.1142/s0129054108006200.
Full textJemima, Samuel Mary, and Rajkumar Dare. "Watson-Crick Local Languages and Watson-Crick Two Dimensional Local Languages." International Journal of Mathematics and Soft Computing 5, no. 2 (July 10, 2015): 165. http://dx.doi.org/10.26708/ijmsc.2015.2.5.19.
Full textMahalingam, Kalpana, Ujjwal Kumar Mishra, and Rama Raghavan. "Watson–Crick Jumping Finite Automata." International Journal of Foundations of Computer Science 31, no. 07 (November 2020): 891–913. http://dx.doi.org/10.1142/s0129054120500331.
Full textXu, Yu, Akanksha Manghrani, Bei Liu, Honglue Shi, Uyen Pham, Amy Liu, and Hashim M. Al-Hashimi. "Hoogsteen base pairs increase the susceptibility of double-stranded DNA to cytotoxic damage." Journal of Biological Chemistry 295, no. 47 (September 10, 2020): 15933–47. http://dx.doi.org/10.1074/jbc.ra120.014530.
Full textChatterjee, Kingshuk, and Kumar Sankar Ray. "Reversible Watson–Crick automata." Acta Informatica 54, no. 5 (April 19, 2016): 487–99. http://dx.doi.org/10.1007/s00236-016-0267-0.
Full textChatterjee, Kingshuk, and Kumar Sankar Ray. "Unary Watson-Crick automata." Theoretical Computer Science 782 (August 2019): 107–12. http://dx.doi.org/10.1016/j.tcs.2019.03.009.
Full textDissertations / Theses on the topic "Watson-Crick"
Pan, Baocheng. "X-ray crystallographic studies on oligonucleotide structures containing non-watson-crick base pairs /." The Ohio State University, 1998. http://rave.ohiolink.edu/etdc/view?acc_num=osu1487951907958194.
Full textSilvester, Nicole Cherie. "Terminal Modifications of PNA and Their Use in Diagnostic and Antisense Technologies." Thesis, Griffith University, 2008. http://hdl.handle.net/10072/366991.
Full textThesis (PhD Doctorate)
Doctor of Philosophy (PhD)
School of Biomolecular and Physical Sciences
Science, Environment, Engineering and Technology
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Ke, Song-Hua. "Determination of non-watson-crick base pair stability and development of a new method for mutation detection." Diss., Georgia Institute of Technology, 1994. http://hdl.handle.net/1853/25198.
Full textMahalingam, Kalpana. "Involution codes with application to DNA strand design." [Tampa, Fla.] : University of South Florida, 2004. http://purl.fcla.edu/fcla/etd/SFE0000409.
Full textKhisamutdinov, Emil. "Part I Nucleic Acid Site-Selective Binding Studies of Isomers of Dihydrodioxin-Masked Ortho-Quinones as Potential Antitumor Drugs Part II The Role of Non-Watson-Crick Base Pairs in Stabilizing Recurrent RNA Motif." Bowling Green State University / OhioLINK, 2012. http://rave.ohiolink.edu/etdc/view?acc_num=bgsu1339432575.
Full textAbu, Almakarem Amal S. "Base Triples in RNA 3D Structures: Identifying, Clustering and Classifying." Bowling Green State University / OhioLINK, 2011. http://rave.ohiolink.edu/etdc/view?acc_num=bgsu1308783522.
Full textChin, Ko-Hsin, and 秦可欣. "Deformed Watson-Crick Base Pair." Thesis, 2002. http://ndltd.ncl.edu.tw/handle/29108891764741487083.
Full text國立中興大學
生物化學研究所
90
In 1953, James Watson and Francis Crick deduced the double helical structure of DNA and immediately inferred its mechanism of replication. This brilliant accomplishment is ranked as one of the most significant stepping stone in the history of biology because it leads to the understanding of gene function at molecular level. Thus, it has been well known that Watson-Crick base pairing is very stable. However, we have found that it is not always the case; Watson-Crick pairing can sometimes form alternate conformations, i.e. the canonical Watson-Crick G/C or A/T hydrogen-bonded base pairs can be either induced to become perpendicular with the base plane or be transformed into stacked pair. Such facile manipulation of Watson-Crick pair in either trans or cis way greatly increases the repertoire for unusual nucleic acid structural motifs and for sequence-specific DNA recognitions.
Sears, David. "The Computational Power of Extended Watson-Crick L Systems." Thesis, 2010. http://hdl.handle.net/1974/6224.
Full textThesis (Master, Computing) -- Queen's University, 2010-12-06 18:29:23.584
Kimsey, Isaac Joseph. "Visualizing Rare Watson-Crick-Like Tautomeric and Anionic Mismatches in DNA and RNA." Diss., 2016. http://hdl.handle.net/10161/12885.
Full textThe central dogma of molecular biology relies on the correct Watson-Crick (WC) geometry of canonical deoxyribonucleic acid (DNA) dG•dC and dA•dT base pairs to replicate and transcribe genetic information with speed and an astonishing level of fidelity. In addition, the Watson-Crick geometry of canonical ribonucleic acid (RNA) rG•rC and rA•rU base pairs is highly conserved to ensure that proteins are translated with high fidelity. However, numerous other potential nucleobase tautomeric and ionic configurations are possible that can give rise to entirely new pairing modes between the nucleotide bases. Very early on, James Watson and Francis Crick recognized their importance and in 1953 postulated that if bases adopted one of their less energetically disfavored tautomeric forms (and later ionic forms) during replication it could lead to the formation of a mismatch with a Watson-Crick-like geometry and could give rise to “natural mutations.”
Since this time numerous studies have provided evidence in support of this hypothesis and have expanded upon it; computational studies have addressed the energetic feasibilities of different nucleobases’ tautomeric and ionic forms in siico; crystallographic studies have trapped different mismatches with WC-like geometries in polymerase or ribosome active sites. However, no direct evidence has been given for (i) the direct existence of these WC-like mismatches in canonical DNA duplex, RNA duplexes, or non-coding RNAs; (ii) which, if any, tautomeric or ionic form stabilizes the WC-like geometry. This thesis utilizes nuclear magnetic resonance (NMR) spectroscopy and rotating frame relaxation dispersion (R1ρ RD) in combination with density functional theory (DFT), biochemical assays, and targeted chemical perturbations to show that (i) dG•dT mismatches in DNA duplexes, as well as rG•rU mismatches RNA duplexes and non-coding RNAs, transiently adopt a WC-like geometry that is stabilized by (ii) an interconnected network of rapidly interconverting rare tautomers and anionic bases. These results support Watson and Crick’s tautomer hypothesis, but additionally support subsequent hypotheses invoking anionic mismatches and ultimately tie them together. This dissertation shows that a common mismatch can adopt a Watson-Crick-like geometry globally, in both DNA and RNA, and whose geometry is stabilized by a kinetically linked network of rare tautomeric and anionic bases. The studies herein also provide compelling evidence for their involvement in spontaneous replication and translation errors.
Dissertation
Liou, Shih-Jhang, and 劉仕章. "Biosensor development based on non-Watson-Crick base pairings combing with signal amplification strategy." Thesis, 2018. http://ndltd.ncl.edu.tw/handle/kdw7x3.
Full textBooks on the topic "Watson-Crick"
Crick, Watson & DNA. London: Arrow, 1997.
Find full textCrick, Watson, and DNA. New York: Anchor Books, 1999.
Find full textAnniss, Matt. James Watson and Francis Crick. New York, NY: Gareth Stevens Publishing, 2015.
Find full textSherrow, Victoria. James Watson & Francis Crick: Decoding the secrets of DNA. Woodbridge, Conn: Blackbirch Press Book, 1995.
Find full textSherrow, Victoria. James Watson & Francis Crick: Decoding the secrets of DNA. Woodbridge, Conn: Blackbirch Press Book, 1995.
Find full textGallardo-Cabello, Manuel. Atrapados en la doble hélice: James Watson y Francis Crick. México: Consejo Nacional para la Cultura y las Artes, 1991.
Find full textGallardo-Cabello, Manuel. Atrapados en la doble hélice: James Watson y Francis Crick. México: Consejo Nacional para la Cultura y las Artes, 1991.
Find full textGallardo-Cabello, Manuel. Atrapados en la doble he lice: James Watson, Francis Crick. Me xico, D.F: Editorial Pax Me xico, 2007.
Find full textFrancis Crick and James Watson and the building blocks of life. New York: Oxford University Press, 2000.
Find full textNewton, David E. James Watson & Francis Crick: Discovery of the double Helix and behond. New York: Facts on File, 1992.
Find full textBook chapters on the topic "Watson-Crick"
Cleaves, Henderson James. "Watson–Crick Pairing." In Encyclopedia of Astrobiology, 1775–76. Berlin, Heidelberg: Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-11274-4_1683.
Full textCleaves, Henderson James. "Watson-Crick Pairing." In Encyclopedia of Astrobiology, 2650. Berlin, Heidelberg: Springer Berlin Heidelberg, 2015. http://dx.doi.org/10.1007/978-3-662-44185-5_1683.
Full textPăun, Gheorghe, Grzegorz Rozenberg, and Arto Salomaa. "Watson—Crick Automata." In DNA Computing, 151–86. Berlin, Heidelberg: Springer Berlin Heidelberg, 1998. http://dx.doi.org/10.1007/978-3-662-03563-4_6.
Full textCleaves, Henderson James. "Watson-Crick Pairing." In Encyclopedia of Astrobiology, 1. Berlin, Heidelberg: Springer Berlin Heidelberg, 2014. http://dx.doi.org/10.1007/978-3-642-27833-4_1683-4.
Full textCleaves, Henderson James. "Watson-Crick Pairing." In Encyclopedia of Astrobiology, 1. Berlin, Heidelberg: Springer Berlin Heidelberg, 2022. http://dx.doi.org/10.1007/978-3-642-27833-4_1683-5.
Full textKulkarni, Manasi S., Kalpana Mahalingam, and Ananda Chandra Nayak. "Watson-Crick Partial Words." In Theory and Practice of Natural Computing, 190–202. Cham: Springer International Publishing, 2017. http://dx.doi.org/10.1007/978-3-319-71069-3_15.
Full textFreund, R., Gh Păun, G. Rozenberg, and A. Salomaa. "Watson-Crick finite automata." In DNA Based Computers III, 297–327. Providence, Rhode Island: American Mathematical Society, 1999. http://dx.doi.org/10.1090/dimacs/048/22.
Full textMohamad Zulkufli, N. L., S. Turaev, M. I. Mohd Tamrin, and A. Messikh. "Watson-Crick Linear Grammars." In Proceedings of the International Conference on Data Engineering 2015 (DaEng-2015), 403–12. Singapore: Springer Singapore, 2019. http://dx.doi.org/10.1007/978-981-13-1799-6_42.
Full textKutrib, Martin, and Andreas Malcher. "Two-Party Watson-Crick Computations." In Implementation and Application of Automata, 191–200. Berlin, Heidelberg: Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-18098-9_21.
Full textMahalingam, Kalpana, Rama Raghavan, and Ujjwal Kumar Mishra. "Watson-Crick Jumping Finite Automata." In Lecture Notes in Computer Science, 467–80. Cham: Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-14812-6_29.
Full textConference papers on the topic "Watson-Crick"
Samuel, Mary Jemima, and V. R. Daret. "Watson-Crick online tessellation automaton and timed Watson-Crick ω-automaton." In 2010 IEEE Fifth International Conference on Bio-Inspired Computing: Theories and Applications (BIC-TA). IEEE, 2010. http://dx.doi.org/10.1109/bicta.2010.5645070.
Full textTamrin, Mohd Izzuddin Mohd, Sherzod Turaev, and Tengku Mohd Tengku Sembok. "Weighted Watson-Crick automata." In PROCEEDINGS OF THE 21ST NATIONAL SYMPOSIUM ON MATHEMATICAL SCIENCES (SKSM21): Germination of Mathematical Sciences Education and Research towards Global Sustainability. AIP Publishing LLC, 2014. http://dx.doi.org/10.1063/1.4887606.
Full textSubramanian, K. G., S. Hemalatha, and Ibrahim Venkat. "On Watson-Crick automata." In the Second International Conference. New York, New York, USA: ACM Press, 2012. http://dx.doi.org/10.1145/2393216.2393242.
Full textCarell, T. "DNA bases beyond Watson and Crick." In XVIth Symposium on Chemistry of Nucleic Acid Components. Prague: Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 2014. http://dx.doi.org/10.1135/css201414175.
Full textCsuhaj-Varjú, Erzsébet, and Arto Salomaa. "Networks of Watson-Crick D0L systems." In Proceedings of the International Colloquium. WORLD SCIENTIFIC, 2003. http://dx.doi.org/10.1142/9789812704979_0009.
Full textZulkufli, Nurul Liyana binti Mohamad, Sherzod Turaev, Mohd Izzuddin Mohd Tamrin, and Messikh Azeddine. "Closure properties of Watson-Crick grammars." In INNOVATION AND ANALYTICS CONFERENCE AND EXHIBITION (IACE 2015): Proceedings of the 2nd Innovation and Analytics Conference & Exhibition. AIP Publishing LLC, 2015. http://dx.doi.org/10.1063/1.4937082.
Full textJan, Nurhidaya Mohamad, Fong Wan Heng, Nor Haniza Sarmin, and Sherzod Turaev. "Closure properties of Watson-Crick Petri net." In PROCEEDING OF THE 25TH NATIONAL SYMPOSIUM ON MATHEMATICAL SCIENCES (SKSM25): Mathematical Sciences as the Core of Intellectual Excellence. Author(s), 2018. http://dx.doi.org/10.1063/1.5041659.
Full textBinti Mohamad Zulkufli, Nurul Liyana, Sherzod Turaev, Mohd Izzuddin Mohd Tamrin, Azeddine Messikh, and Imad Fakhri Taha Alshaikhli. "Computational Properties of Watson-Crick Context-Free Grammars." In 2015 4th International Conference on Advanced Computer Science Applications and Technologies (ACSAT). IEEE, 2015. http://dx.doi.org/10.1109/acsat.2015.19.
Full textCojocaru, Liliana. "Watson-Crick automata and PCFAS with two components." In the first conference on computing frontiers. New York, New York, USA: ACM Press, 2004. http://dx.doi.org/10.1145/977091.977113.
Full textRothemund, Paul W. K. "Beyond Watson and Crick: Programming DNA self-assembly for nanofabrication." In 2012 7th IEEE International Conference on Nano/Micro Engineered and Molecular Systems (NEMS). IEEE, 2012. http://dx.doi.org/10.1109/nems.2012.6196703.
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