Journal articles on the topic 'TurboID'
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Cho, Kelvin F., Tess C. Branon, Sanjana Rajeev, Tanya Svinkina, Namrata D. Udeshi, Themis Thoudam, Chulhwan Kwak, et al. "Split-TurboID enables contact-dependent proximity labeling in cells." Proceedings of the National Academy of Sciences 117, no. 22 (May 18, 2020): 12143–54. http://dx.doi.org/10.1073/pnas.1919528117.
Full textCho, Kelvin F., Tess C. Branon, Namrata D. Udeshi, Samuel A. Myers, Steven A. Carr, and Alice Y. Ting. "Proximity labeling in mammalian cells with TurboID and split-TurboID." Nature Protocols 15, no. 12 (November 2, 2020): 3971–99. http://dx.doi.org/10.1038/s41596-020-0399-0.
Full textMay, Danielle G., Kelsey L. Scott, Alexandre R. Campos, and Kyle J. Roux. "Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation." Cells 9, no. 5 (April 25, 2020): 1070. http://dx.doi.org/10.3390/cells9051070.
Full textDoerr, Allison. "Proximity labeling with TurboID." Nature Methods 15, no. 10 (October 2018): 764. http://dx.doi.org/10.1038/s41592-018-0158-0.
Full textGarloff, Vera, and Ignacio Rubio. "Schneller, weiter, TurboID – Modulation einer übereifrigen Biotin-Ligase." BIOspektrum 29, no. 3 (May 2023): 273–75. http://dx.doi.org/10.1007/s12268-023-1943-6.
Full textMakhsatova, S. A., A. B. Kurmanbay, I. A. Akhmetollayev, and A. T. Kulyyassov. "ASSEMBLING THE TURBOID-CONTAINING PLASMID CONSTRUCT FOR INVESTIGATING THE IN VIVO PROTEIN-PROTEIN INTERACTIONS." Eurasian Journal of Applied Biotechnology, no. 3S (September 12, 2024): 47. http://dx.doi.org/10.11134/btp.3s.2024.35.
Full textTakano, Tetsuya. "Comprehensive identification of molecules at synapses and non-synaptic cell-adhesion structure." Impact 2023, no. 3 (September 21, 2023): 46–48. http://dx.doi.org/10.21820/23987073.2023.3.46.
Full textRabinovich-Ernst, Orna, Clinton Bradfield, SungHwan Yoon, Anthony Armstrong, Samuel Katz, Aleksandra Nita-Lazar, and Iain Fraser. "TurboID biotin-tagging mass spectrometry identifies specific caspase-11-associated proteins regulating non-canonical inflammasome activation." Journal of Immunology 206, no. 1_Supplement (May 1, 2021): 15.06. http://dx.doi.org/10.4049/jimmunol.206.supp.15.06.
Full textKim, Han Byeol, and Kwang-eun Kim. "Precision proteomics with TurboID: mapping the suborganelle landscape." Korean Journal of Physiology & Pharmacology 28, no. 6 (November 1, 2024): 495–501. http://dx.doi.org/10.4196/kjpp.2024.28.6.495.
Full textGurung, Sadeechya. "Abstract 998: Extracellular proximity labeling (ePL) as a tool to identify protein-protein interactions in the tumor microenvironment." Cancer Research 82, no. 12_Supplement (June 15, 2022): 998. http://dx.doi.org/10.1158/1538-7445.am2022-998.
Full textTeplova, Anastasia D., Marina V. Serebryakova, Raisa A. Galiullina, Nina V. Chichkova, and Andrey B. Vartapetian. "Identification of Phytaspase Interactors via the Proximity-Dependent Biotin-Based Identification Approach." International Journal of Molecular Sciences 22, no. 23 (December 4, 2021): 13123. http://dx.doi.org/10.3390/ijms222313123.
Full textHolzer, Elisabeth, Cornelia Rumpf-Kienzl, Sebastian Falk, and Alexander Dammermann. "A modified TurboID approach identifies tissue-specific centriolar components in C. elegans." PLOS Genetics 18, no. 4 (April 20, 2022): e1010150. http://dx.doi.org/10.1371/journal.pgen.1010150.
Full textBranon, Tess C., Justin A. Bosch, Ariana D. Sanchez, Namrata D. Udeshi, Tanya Svinkina, Steven A. Carr, Jessica L. Feldman, Norbert Perrimon, and Alice Y. Ting. "Efficient proximity labeling in living cells and organisms with TurboID." Nature Biotechnology 36, no. 9 (October 2018): 880–87. http://dx.doi.org/10.1038/nbt.4201.
Full textPeeney, David, Sadeechya Gurung, Josh Rich, Sasha Coates-Park, Yueqin Liu, and William G. Stetler-Stevenson. "Abstract 2348: Mapping the interactome of matrisome targets using extracellular proximity labeling (ePL)." Cancer Research 83, no. 7_Supplement (April 4, 2023): 2348. http://dx.doi.org/10.1158/1538-7445.am2023-2348.
Full textArtan, Murat, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, and Mario de Bono. "Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling." Journal of Biological Chemistry 297, no. 3 (September 2021): 101094. http://dx.doi.org/10.1016/j.jbc.2021.101094.
Full textSmirnova, Evgeniya V., Tatiana V. Rakitina, Rustam H. Ziganshin, George A. Saratov, Georgij P. Arapidi, Alexey A. Belogurov, and Anna A. Kudriaeva. "Identification of Myelin Basic Protein Proximity Interactome Using TurboID Labeling Proteomics." Cells 12, no. 6 (March 20, 2023): 944. http://dx.doi.org/10.3390/cells12060944.
Full textFujimoto, Shintaro, Shinya Tashiro, and Yasushi Tamura. "Complementation Assay Using Fusion of Split-GFP and TurboID (CsFiND) Enables Simultaneous Visualization and Proximity Labeling of Organelle Contact Sites in Yeast." Contact 6 (January 2023): 251525642311536. http://dx.doi.org/10.1177/25152564231153621.
Full textArtan, Murat, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, and Mario de Bono. "Correction: Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling." Journal of Biological Chemistry 298, no. 6 (June 2022): 102081. http://dx.doi.org/10.1016/j.jbc.2022.102081.
Full textBranon, Tess C., Justin A. Bosch, Ariana D. Sanchez, Namrata D. Udeshi, Tanya Svinkina, Steven A. Carr, Jessica L. Feldman, Norbert Perrimon, and Alice Y. Ting. "Author Correction: Efficient proximity labeling in living cells and organisms with TurboID." Nature Biotechnology 38, no. 1 (November 20, 2019): 108. http://dx.doi.org/10.1038/s41587-019-0355-0.
Full textWang, Chenyu, and Laidong Yu. "TurboID Proximity Labeling of a Protocadherin Protein to Characterize Interacting Protein Complex." American Journal of Molecular Biology 13, no. 04 (2023): 213–26. http://dx.doi.org/10.4236/ajmb.2023.134015.
Full textWei, Xia-fei, Shan Li, and Jie-li Hu. "A TurboID-based proximity labelling approach for identifying the DNA-binding proteins." STAR Protocols 4, no. 1 (March 2023): 102139. http://dx.doi.org/10.1016/j.xpro.2023.102139.
Full textSchaan Profes, Marcos, Araven Tiroumalechetty, Neel Patel, Stephanie S. Lauar, Simone Sidoli, and Peri T. Kurshan. "Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly." PLOS Biology 22, no. 1 (January 22, 2024): e3002466. http://dx.doi.org/10.1371/journal.pbio.3002466.
Full textKanzler, Charlotte R., Michael Donohue, Megan E. Dowdle, and Michael D. Sheets. "TurboID functions as an efficient biotin ligase for BioID applications in Xenopus embryos." Developmental Biology 492 (December 2022): 133–38. http://dx.doi.org/10.1016/j.ydbio.2022.10.005.
Full textHolzer, Elisabeth, Cornelia Rumpf-Kienzl, Sebastian Falk, and Alexander Dammermann. "Correction: A modified TurboID approach identifies tissue-specific centriolar components in C. elegans." PLOS Genetics 19, no. 2 (February 13, 2023): e1010645. http://dx.doi.org/10.1371/journal.pgen.1010645.
Full textLarochelle, Marc, Danny Bergeron, Bruno Arcand, and François Bachand. "Proximity-dependent biotinylation mediated by TurboID to identify protein–protein interaction networks in yeast." Journal of Cell Science 132, no. 11 (May 7, 2019): jcs232249. http://dx.doi.org/10.1242/jcs.232249.
Full textGottschalk, Robert, Leah Wachsmuth, Dingyin Tao, Sandeep Rana, Tino Sanchez, Yi-Han Lin, Ganesha Rai, Juan Marugan, and Mark Henderson. "Abstract 2657: SNAP-TurboID: A Proximity-based Intracellular Tool for Small Molecule Target Identification." Journal of Biological Chemistry 299, no. 3 (2023): S156. http://dx.doi.org/10.1016/j.jbc.2023.103345.
Full textNascari, David, Ryan Eghlimi, Angad Beniwal, Drake Alton, John Fryer, and Nhan L. Tran. "Abstract 5562: Altered tumor microenvironment in animal model of concomitant GBM and Alzheimer's pathology." Cancer Research 84, no. 6_Supplement (March 22, 2024): 5562. http://dx.doi.org/10.1158/1538-7445.am2024-5562.
Full textKalkan, Batuhan, Can Ozcan, Enes Cicek, and Ceyda Acilan. "Nek2A Prevents Centrosome Clustering and Induces Cell Death in Cancer Cells Via KIF2C Interaction." JCO Global Oncology 10, Supplement_1 (July 2024): 133. http://dx.doi.org/10.1200/go-24-10800.
Full textLi, Haorong, Ashley M. Frankenfield, Ryan Houston, Shiori Sekine, and Ling Hao. "Thiol-Cleavable Biotin for Chemical and Enzymatic Biotinylation and Its Application to Mitochondrial TurboID Proteomics." Journal of the American Society for Mass Spectrometry 32, no. 9 (April 28, 2021): 2358–65. http://dx.doi.org/10.1021/jasms.1c00079.
Full textYan, Biao, Ting Zeng, Xiaoshan Liu, Yuanyuan Guo, Hongguang Chen, Shuang Guo, and Wu Liu. "Study on the interaction protein of transcription factor Smad3 based on TurboID proximity labeling technology." Genomics 116, no. 3 (May 2024): 110839. http://dx.doi.org/10.1016/j.ygeno.2024.110839.
Full textChevalier, Benoît, Nesrine Baatallah, Matthieu Najm, Solène Castanier, Vincent Jung, Iwona Pranke, Anita Golec, et al. "Differential CFTR-Interactome Proximity Labeling Procedures Identify Enrichment in Multiple SLC Transporters." International Journal of Molecular Sciences 23, no. 16 (August 11, 2022): 8937. http://dx.doi.org/10.3390/ijms23168937.
Full textCiesla, Jessica, Kai-Lieh Huang, Eric J. Wagner, and Joshua Munger. "A UL26-PIAS1 complex antagonizes anti-viral gene expression during Human Cytomegalovirus infection." PLOS Pathogens 20, no. 5 (May 20, 2024): e1012058. http://dx.doi.org/10.1371/journal.ppat.1012058.
Full textShioya, Ryouhei, Kohdai Yamada, Kohki Kido, Hirotaka Takahashi, Akira Nozawa, Hidetaka Kosako, and Tatsuya Sawasaki. "A simple method for labeling proteins and antibodies with biotin using the proximity biotinylation enzyme TurboID." Biochemical and Biophysical Research Communications 592 (February 2022): 54–59. http://dx.doi.org/10.1016/j.bbrc.2021.12.109.
Full textHu, Yaofang, Changsheng Jiang, Yueqiao Zhao, Hua Cao, Jingping Ren, Wei Zeng, Mengjia Zhang, Yongtao Li, Qigai He, and Wentao Li. "TurboID screening of ApxI toxin interactants identifies host proteins involved in Actinobacillus pleuropneumoniae-induced apoptosis of immortalized porcine alveolar macrophages." Veterinary Research 54, no. 1 (July 20, 2023). http://dx.doi.org/10.1186/s13567-023-01194-6.
Full textWang, Bo, Fan Yang, Wuqian Wang, Fei Zhao, and Xiaofang Sun. "TurboID-mediated proximity labeling technologies to identify virus co-receptors." Frontiers in Cellular and Infection Microbiology 14 (June 27, 2024). http://dx.doi.org/10.3389/fcimb.2024.1371837.
Full textMair, Andrea, Shou-Ling Xu, Tess C. Branon, Alice Y. Ting, and Dominique C. Bergmann. "Proximity labeling of protein complexes and cell-type-specific organellar proteomes in Arabidopsis enabled by TurboID." eLife 8 (September 19, 2019). http://dx.doi.org/10.7554/elife.47864.
Full textShafraz, Omer, Carolyn Marie Orduno Davis, and Sanjeevi Sivasankar. "Light Activated BioID (LAB): an optically activated proximity labeling system to study protein-protein interactions." Journal of Cell Science, September 27, 2023. http://dx.doi.org/10.1242/jcs.261430.
Full textKushner, Jared S., Aaron Rodriques, Sergey Zakharov, Alexander Katchman, STAVROS FANOURAKIS, and Steven Marx. "Abstract 12045: Mapping the CaV1.2 Interactome in Rat Heart in vivo." Circulation 146, Suppl_1 (November 8, 2022). http://dx.doi.org/10.1161/circ.146.suppl_1.12045.
Full textZhang, Bo, Yuanbing Zhang, and Ji-Long Liu. "Highly effective proximate labeling in Drosophila." G3 Genes|Genomes|Genetics 11, no. 5 (March 16, 2021). http://dx.doi.org/10.1093/g3journal/jkab077.
Full textSu, Yanting, Yuanyuan Guo, Jieyu Guo, Ting Zeng, Ting Wang, and Wu Liu. "Study of FOXO1-interacting proteins using TurboID-based proximity labeling technology." BMC Genomics 24, no. 1 (March 24, 2023). http://dx.doi.org/10.1186/s12864-023-09238-z.
Full textSzczesniak, Laura M., Caden G. Bonzerato, and Richard J. H. Wojcikiewicz. "Identification of the Bok Interactome Using Proximity Labeling." Frontiers in Cell and Developmental Biology 9 (May 31, 2021). http://dx.doi.org/10.3389/fcell.2021.689951.
Full textLau, Chun Sing, Adam Dowle, Gavin H. Thomas, Philipp Girr, and Luke C. M. Mackinder. "A phase-separated CO2-fixing pyrenoid proteome determined by TurboID in Chlamydomonas reinhardtii." Plant Cell, May 17, 2023. http://dx.doi.org/10.1093/plcell/koad131.
Full textLi, Xiaofang, Yanping Wei, Qili Fei, Guilin Fu, Yu Gan, and Chuanlin Shi. "TurboID‐mediated proximity labeling for screening interacting proteins of FIP37 in Arabidopsis." Plant Direct 7, no. 12 (December 2023). http://dx.doi.org/10.1002/pld3.555.
Full textYheskel, Matanel, Simone Sidoli, and Julie Secombe. "Proximity labeling reveals a new in vivo network of interactors for the histone demethylase KDM5." Epigenetics & Chromatin 16, no. 1 (February 18, 2023). http://dx.doi.org/10.1186/s13072-023-00481-y.
Full textHaidar-Ahmad, Nathaline, Kyle Tomaro, Mathieu Lavallée-Adam, and François-Xavier Campbell-Valois. "The promiscuous biotin ligase TurboID reveals the proxisome of the T3SS chaperone IpgC in Shigella flexneri." mSphere, October 31, 2024. http://dx.doi.org/10.1128/msphere.00553-24.
Full textZhang, Kaixin, Yinyin Li, Tengbo Huang, and Ziwei Li. "Potential application of TurboID-based proximity labeling in studying the protein interaction network in plant response to abiotic stress." Frontiers in Plant Science 13 (August 16, 2022). http://dx.doi.org/10.3389/fpls.2022.974598.
Full textZhang, Qianshen, Zhiyan Wen, Xin Zhang, Jiajie She, Xiaoling Wang, Zongyu Gao, Ruiqi Wang, et al. "RETICULON-LIKE PROTEIN B2 is a pro-viral factor co-opted for the biogenesis of viral replication organelles in plants." Plant Cell, May 22, 2023. http://dx.doi.org/10.1093/plcell/koad146.
Full textPark, Sohyeon, Xiaorong Wang, Yajin Mo, Sicheng Zhang, Xiangpeng Li, Katie C. Fong, Clinton Yu, et al. "Proximity Labeling Expansion Microscopy (PL-ExM) Evaluates Interactome Labeling Techniques." Journal of Materials Chemistry B, 2024. http://dx.doi.org/10.1039/d4tb00516c.
Full textChen, Rui, Ningxia Zhang, Yubin Zhou, and Ji Jing. "Optical Sensors and Actuators for Probing Proximity-Dependent Biotinylation in Living Cells." Frontiers in Cellular Neuroscience 16 (February 16, 2022). http://dx.doi.org/10.3389/fncel.2022.801644.
Full textKreis, Elena, Katharina König, Melissa Misir, Justus Niemeyer, Frederik Sommer, and Michael Schroda. "TurboID reveals the proxiomes of Chlamydomonas proteins involved in thylakoid biogenesis and stress response." Plant Physiology, June 13, 2023. http://dx.doi.org/10.1093/plphys/kiad335.
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