Journal articles on the topic 'Transposable elements; repeats; evolution'
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Hartley, Gabrielle, and Rachel O’Neill. "Centromere Repeats: Hidden Gems of the Genome." Genes 10, no. 3 (March 16, 2019): 223. http://dx.doi.org/10.3390/genes10030223.
Full textWarren, William D., Peter W. Atkinson, and David A. O'Brochta. "The Hermes transposable element from the house fly, Musca domestica, is a short inverted repeat-type element of the hobo, Ac, and Tam3 (hAT) element family." Genetical Research 64, no. 2 (October 1994): 87–97. http://dx.doi.org/10.1017/s0016672300032699.
Full textLower, Sarah E., Anne-Marie Dion-Côté, Andrew G. Clark, and Daniel A. Barbash. "Special Issue: Repetitive DNA Sequences." Genes 10, no. 11 (November 6, 2019): 896. http://dx.doi.org/10.3390/genes10110896.
Full textZhang, Peng, Wanlong Li, Bernd Friebe, and Bikram S. Gill. "Simultaneous painting of three genomes in hexaploid wheat by BAC-FISH." Genome 47, no. 5 (October 1, 2004): 979–87. http://dx.doi.org/10.1139/g04-042.
Full textAhmad, Syed Farhan, Worapong Singchat, Thitipong Panthum, and Kornsorn Srikulnath. "Impact of Repetitive DNA Elements on Snake Genome Biology and Evolution." Cells 10, no. 7 (July 6, 2021): 1707. http://dx.doi.org/10.3390/cells10071707.
Full textSessegolo, Camille, Nelly Burlet, and Annabelle Haudry. "Strong phylogenetic inertia on genome size and transposable element content among 26 species of flies." Biology Letters 12, no. 8 (August 2016): 20160407. http://dx.doi.org/10.1098/rsbl.2016.0407.
Full textFattash, Isam, Rebecca Rooke, Amy Wong, Caleb Hui, Tina Luu, Priyanka Bhardwaj, and Guojun Yang. "Miniature inverted-repeat transposable elements: discovery, distribution, and activity." Genome 56, no. 9 (September 2013): 475–86. http://dx.doi.org/10.1139/gen-2012-0174.
Full textWu, Changcheng, and Jian Lu. "Diversification of Transposable Elements in Arthropods and Its Impact on Genome Evolution." Genes 10, no. 5 (May 6, 2019): 338. http://dx.doi.org/10.3390/genes10050338.
Full textYu, Zhihui, Stephen I. Wright, and Thomas E. Bureau. "Mutator-like Elements in Arabidopsis thaliana: Structure, Diversity and Evolution." Genetics 156, no. 4 (December 1, 2000): 2019–31. http://dx.doi.org/10.1093/genetics/156.4.2019.
Full textHertweck, Kate L. "Assembly and comparative analysis of transposable elements from low coverage genomic sequence data in Asparagales." Genome 56, no. 9 (September 2013): 487–94. http://dx.doi.org/10.1139/gen-2013-0042.
Full textJeon, Young-Ji, Yun-Hee Shin, Su-Jeong Cheon, and Young-Doo Park. "Identification and Characterization of PTE-2, a Stowaway-like MITE Activated in Transgenic Chinese Cabbage Lines." Genes 13, no. 7 (July 8, 2022): 1222. http://dx.doi.org/10.3390/genes13071222.
Full textZhang, Xiaoyu, Ning Jiang, Cédric Feschotte, and Susan R. Wessler. "PIF- andPong-Like Transposable Elements: Distribution, Evolution and Relationship WithTourist-Like Miniature Inverted-Repeat Transposable Elements." Genetics 166, no. 2 (February 2004): 971–86. http://dx.doi.org/10.1534/genetics.166.2.971.
Full textHloušková, Petra, Terezie Mandáková, Milan Pouch, Pavel Trávníček, and Martin A. Lysak. "The large genome size variation in the Hesperis clade was shaped by the prevalent proliferation of DNA repeats and rarer genome downsizing." Annals of Botany 124, no. 1 (April 11, 2019): 103–20. http://dx.doi.org/10.1093/aob/mcz036.
Full textJACINTO, DANIELE S., HELOISA DOS SANTOS MUNIZ, THIAGO M. VENANCIO, R. ALAN WILSON, SERGIO VERJOVSKI-ALMEIDA, and RICARDO DEMARCO. "Curupira-1 and Curupira-2, two novel Mutator-like DNA transposons from the genomes of human parasites Schistosoma mansoni and Schistosoma japonicum." Parasitology 138, no. 9 (July 15, 2011): 1124–33. http://dx.doi.org/10.1017/s0031182011000886.
Full textZhang, Xiaoyu, Ning Jiang, Cédric Feschotte, and Susan R. Wessler. "PIF- and Pong-Like Transposable Elements: Distribution, Evolution and Relationship With Tourist-Like Miniature Inverted-Repeat Transposable Elements." Genetics 166, no. 2 (February 1, 2004): 971–86. http://dx.doi.org/10.1093/genetics/166.2.971.
Full textCarducci, Federica, Marco Barucca, Adriana Canapa, and Maria Biscotti. "Rex Retroelements and Teleost Genomes: An Overview." International Journal of Molecular Sciences 19, no. 11 (November 20, 2018): 3653. http://dx.doi.org/10.3390/ijms19113653.
Full textJudelson, Howard S., and Thomas A. Randall. "Families of repeated DNA in the oomycete Phytophthora infestans and their distribution within the genus." Genome 41, no. 4 (August 1, 1998): 605–15. http://dx.doi.org/10.1139/g98-060.
Full textCerbin, Stefan, Ching Man Wai, Robert VanBuren, and Ning Jiang. "GingerRoot: A Novel DNA Transposon Encoding Integrase-Related Transposase in Plants and Animals." Genome Biology and Evolution 11, no. 11 (October 21, 2019): 3181–93. http://dx.doi.org/10.1093/gbe/evz230.
Full textCasacuberta, Elena, and Mary-Lou Pardue. "Coevolution of the Telomeric Retrotransposons Across Drosophila Species." Genetics 161, no. 3 (July 1, 2002): 1113–24. http://dx.doi.org/10.1093/genetics/161.3.1113.
Full textRobillard, Émilie, Arnaud Le Rouzic, Zheng Zhang, Pierre Capy, and Aurélie Hua-Van. "Experimental evolution reveals hyperparasitic interactions among transposable elements." Proceedings of the National Academy of Sciences 113, no. 51 (December 5, 2016): 14763–68. http://dx.doi.org/10.1073/pnas.1524143113.
Full textSultana, Nusrat, Gerhard Menzel, Tony Heitkam, Kenji K. Kojima, Weidong Bao, and Sedat Serçe. "Bioinformatic and Molecular Analysis of Satellite Repeat Diversity in Vaccinium Genomes." Genes 11, no. 5 (May 9, 2020): 527. http://dx.doi.org/10.3390/genes11050527.
Full textMuyle, Aline, Doris Bachtrog, Gabriel A. B. Marais, and James M. A. Turner. "Epigenetics drive the evolution of sex chromosomes in animals and plants." Philosophical Transactions of the Royal Society B: Biological Sciences 376, no. 1826 (April 19, 2021): 20200124. http://dx.doi.org/10.1098/rstb.2020.0124.
Full textGao, Bo, Yatong Sang, Wencheng Zong, Mohamed Diaby, Dan Shen, Saisai Wang, Yali Wang, Cai Chen, and Chengyi Song. "Evolution and domestication of Tc1/mariner transposons in the genome of African coelacanth (Latimeria chalumnae)." Genome 63, no. 8 (August 2020): 375–86. http://dx.doi.org/10.1139/gen-2019-0216.
Full textPaço, Ana, Renata Freitas, and Ana Vieira-da-Silva. "Conversion of DNA Sequences: From a Transposable Element to a Tandem Repeat or to a Gene." Genes 10, no. 12 (December 5, 2019): 1014. http://dx.doi.org/10.3390/genes10121014.
Full textLiu, Yun-Hua, Meiping Zhang, Chengcang Wu, James J. Huang, and Hong-Bin Zhang. "DNA is structured as a linear “jigsaw puzzle” in the genomes of Arabidopsis, rice, and budding yeast." Genome 57, no. 1 (January 2014): 9–19. http://dx.doi.org/10.1139/gen-2013-0099.
Full textFeliciello, Isidoro, Željka Pezer, Dušan Kordiš, Branka Bruvo Mađarić, and Đurđica Ugarković. "Evolutionary History of Alpha Satellite DNA Repeats Dispersed within Human Genome Euchromatin." Genome Biology and Evolution 12, no. 11 (October 20, 2020): 2125–38. http://dx.doi.org/10.1093/gbe/evaa224.
Full textZattera, Michelle Louise, and Daniel Pacheco Bruschi. "Transposable Elements as a Source of Novel Repetitive DNA in the Eukaryote Genome." Cells 11, no. 21 (October 26, 2022): 3373. http://dx.doi.org/10.3390/cells11213373.
Full textWang, Shi, Lingling Zhang, Eli Meyer, and Zhenmin Bao. "Genome-wide analysis of transposable elements and tandem repeats in the compact placozoan genome." Biology Direct 5, no. 1 (2010): 18. http://dx.doi.org/10.1186/1745-6150-5-18.
Full textSchwarzacher, Trude. "DNA, chromosomes, and in situ hybridization." Genome 46, no. 6 (December 1, 2003): 953–62. http://dx.doi.org/10.1139/g03-119.
Full textChak, Solomon T. C., Stephen E. Harris, Kristin M. Hultgren, Nicholas W. Jeffery, and Dustin R. Rubenstein. "Eusociality in snapping shrimps is associated with larger genomes and an accumulation of transposable elements." Proceedings of the National Academy of Sciences 118, no. 24 (June 7, 2021): e2025051118. http://dx.doi.org/10.1073/pnas.2025051118.
Full textSanz-Alferez, Soledad, Phillip SanMiguel, Young-Kwan Jin, Patricia S. Springer, and Jeffrey L. Bennetzen. "Structure and evolution of the Cinful retrotransposon family of maize." Genome 46, no. 5 (October 1, 2003): 745–52. http://dx.doi.org/10.1139/g03-061.
Full textWang, Lei, Yan Wang, Jing Zhang, Yan Feng, Qing Chen, Zhen-Shan Liu, Cong-Li Liu, et al. "Comparative Analysis of Transposable Elements and the Identification of Candidate Centromeric Elements in the Prunus Subgenus Cerasus and Its Relatives." Genes 13, no. 4 (April 2, 2022): 641. http://dx.doi.org/10.3390/genes13040641.
Full textAli, Arsala, Kyudong Han, and Ping Liang. "Role of Transposable Elements in Gene Regulation in the Human Genome." Life 11, no. 2 (February 4, 2021): 118. http://dx.doi.org/10.3390/life11020118.
Full textWiley, Graham, and Matthew J. Miller. "A Highly Contiguous Genome for the Golden-Fronted Woodpecker (Melanerpes aurifrons) via Hybrid Oxford Nanopore and Short Read Assembly." G3: Genes|Genomes|Genetics 10, no. 6 (April 21, 2020): 1829–36. http://dx.doi.org/10.1534/g3.120.401059.
Full textLe, Quang Hien, Kime Turcotte, and Thomas Bureau. "Tc8, a Tourist-like Transposon in Caenorhabditis elegans." Genetics 158, no. 3 (July 1, 2001): 1081–88. http://dx.doi.org/10.1093/genetics/158.3.1081.
Full textBiswas, Manosh Kumar, Dhiman Biswas, Mita Bagchi, Ganjun Yi, and Guiming Deng. "A Comprehensive Plant microRNA Simple Sequence Repeat Marker Database to Accelerate Genetic Improvements in Crops." Agronomy 11, no. 11 (November 13, 2021): 2298. http://dx.doi.org/10.3390/agronomy11112298.
Full textYaakov, Beery, Elif Ceylan, Katherine Domb, and Khalil Kashkush. "Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution." Theoretical and Applied Genetics 124, no. 7 (January 28, 2012): 1365–73. http://dx.doi.org/10.1007/s00122-012-1793-y.
Full textUsai, Gabriele, Alberto Vangelisti, Samuel Simoni, Tommaso Giordani, Lucia Natali, Andrea Cavallini, and Flavia Mascagni. "DNA Modification Patterns within the Transposable Elements of the Fig (Ficus carica L.) Genome." Plants 10, no. 3 (February 27, 2021): 451. http://dx.doi.org/10.3390/plants10030451.
Full textKirov, Ilya, Elizaveta Kolganova, Maxim Dudnikov, Olga Yu Yurkevich, Alexandra V. Amosova, and Olga V. Muravenko. "A Pipeline NanoTRF as a New Tool for De Novo Satellite DNA Identification in the Raw Nanopore Sequencing Reads of Plant Genomes." Plants 11, no. 16 (August 12, 2022): 2103. http://dx.doi.org/10.3390/plants11162103.
Full textChénais, Benoît. "Transposable Elements and Human Diseases: Mechanisms and Implication in the Response to Environmental Pollutants." International Journal of Molecular Sciences 23, no. 5 (February 25, 2022): 2551. http://dx.doi.org/10.3390/ijms23052551.
Full textPucci, Marcela B., Patricia Barbosa, Viviane Nogaroto, Mara C. Almeida, Roberto F. Artoni, Priscila C. Scacchetti, José C. Pansonato-Alves, Fausto Foresti, Orlando Moreira-Filho, and Marcelo R. Vicari. "Chromosomal Spreading of Microsatellites and (TTAGGG)n Sequences in the Characidium zebra and C. gomesi Genomes (Characiformes: Crenuchidae)." Cytogenetic and Genome Research 149, no. 3 (2016): 182–90. http://dx.doi.org/10.1159/000447959.
Full textDanilevskaya, O., A. Lofsky, E. V. Kurenova, and M. L. Pardue. "The Y chromosome of Drosophila melanogaster contains a distinctive subclass of Het-A-related repeats." Genetics 134, no. 2 (June 1, 1993): 531–43. http://dx.doi.org/10.1093/genetics/134.2.531.
Full textLerat, Emmanuelle, Josep Casacuberta, Cristian Chaparro, and Cristina Vieira. "On the Importance to Acknowledge Transposable Elements in Epigenomic Analyses." Genes 10, no. 4 (March 31, 2019): 258. http://dx.doi.org/10.3390/genes10040258.
Full textMiskey, Csaba, Balázs Papp, Lajos Mátés, Ludivine Sinzelle, Heiko Keller, Zsuzsanna Izsvák, and Zoltán Ivics. "The Ancient mariner Sails Again: Transposition of the Human Hsmar1 Element by a Reconstructed Transposase and Activities of the SETMAR Protein on Transposon Ends." Molecular and Cellular Biology 27, no. 12 (April 2, 2007): 4589–600. http://dx.doi.org/10.1128/mcb.02027-06.
Full textDi Franco, Carmen, Alessandro Terrinoni, Patrizio Dimitri, and Nikolaj Junakovic. "Intragenomic Distribution and Stability of Transposable Elements in Euchromatin and Heterochromatin of Drosophila melanogaster: Elements with Inverted Repeats Bari 1, hobo, and pogo." Journal of Molecular Evolution 45, no. 3 (September 1997): 247–52. http://dx.doi.org/10.1007/pl00006227.
Full textBartosik, Dariusz, Mateusz Putyrski, Lukasz Dziewit, Edyta Malewska, Michal Szymanik, Ewa Jagiello, Jacek Lukasik, and Jadwiga Baj. "Transposable Modules Generated by a Single Copy of Insertion Sequence ISPme1 and Their Influence on Structure and Evolution of Natural Plasmids of Paracoccus methylutens DM12." Journal of Bacteriology 190, no. 9 (February 22, 2008): 3306–13. http://dx.doi.org/10.1128/jb.01878-07.
Full textHikosaka, Akira, and Akira Kawahara. "Lineage-Specific Tandem Repeats Riding on a Transposable Element of MITE in Xenopus Evolution: A New Mechanism for Creating Simple Sequence Repeats." Journal of Molecular Evolution 59, no. 6 (December 2004): 738–46. http://dx.doi.org/10.1007/s00239-004-2664-1.
Full textLuchetti, Andrea, Mariana Lomiento, and Barbara Mantovani. "Riding the Wave: The SINE-Specific V Highly-Conserved Domain Spread into Mammalian Genomes Exploiting the Replication Burst of the MER6 DNA Transposon." International Journal of Molecular Sciences 20, no. 22 (November 9, 2019): 5607. http://dx.doi.org/10.3390/ijms20225607.
Full textCuello, Clément, Emily Amor Stander, Hans J. Jansen, Thomas Dugé De Bernonville, Audrey Oudin, Caroline Birer Williams, Arnaud Lanoue, et al. "An updated version of the Madagascar periwinkle genome." F1000Research 11 (December 21, 2022): 1541. http://dx.doi.org/10.12688/f1000research.129212.1.
Full textZeng, Tie-Bo, Nicholas Pierce, Ji Liao, Purnima Singh, Kin Lau, Wanding Zhou, and Piroska E. Szabó. "EHMT2 suppresses the variation of transcriptional switches in the mouse embryo." PLOS Genetics 17, no. 11 (November 18, 2021): e1009908. http://dx.doi.org/10.1371/journal.pgen.1009908.
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