Journal articles on the topic 'Transcriptome comparison'
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Ochsner, Scott A., Christopher M. Watkins, Apollo McOwiti, Xueping Xu, Yolanda F. Darlington, Michael D. Dehart, Austin J. Cooney, David L. Steffen, Lauren B. Becnel, and Neil J. McKenna. "Transcriptomine, a web resource for nuclear receptor signaling transcriptomes." Physiological Genomics 44, no. 17 (September 1, 2012): 853–63. http://dx.doi.org/10.1152/physiolgenomics.00033.2012.
Full textGonzalez-Ibeas, Daniel, Pedro J. Martinez-Garcia, Randi A. Famula, Annette Delfino-Mix, Kristian A. Stevens, Carol A. Loopstra, Charles H. Langley, David B. Neale, and Jill L. Wegrzyn. "Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana)." G3 Genes|Genomes|Genetics 6, no. 12 (December 1, 2016): 3787–802. http://dx.doi.org/10.1534/g3.116.032805.
Full textReznikov, Leah R., David K. Meyerholz, Mahmoud Abou Alaiwa, Shin-Ping Kuan, Yan-Shin J. Liao, Nicholas L. Bormann, Thomas B. Bair, Margaret Price, David A. Stoltz, and Michael J. Welsh. "The vagal ganglia transcriptome identifies candidate therapeutics for airway hyperreactivity." American Journal of Physiology-Lung Cellular and Molecular Physiology 315, no. 2 (August 1, 2018): L133—L148. http://dx.doi.org/10.1152/ajplung.00557.2017.
Full textQuan, Qing, Lu Zhu, Qi Zheng, Hao Wu, Jing Jing, Qing Chen, Ya Liu, et al. "Comparison of the pituitary gland transcriptome in pregnant and non-pregnant goats (Capra hircus)." Czech Journal of Animal Science 64, No. 10 (October 14, 2019): 420–30. http://dx.doi.org/10.17221/141/2019-cjas.
Full textLondin, Eric R., Eleftheria Hatzimichael, Phillipe Loher, Leonard C. Edelstein, Chad Shaw, Kathleen Delgrosso, Paolo M. Fortina, Paul F. Bray, Steven E. McKenzie, and Isidore Rigoutsos. "Towards a Reference Human Platelet Transcriptome: Evaluation Of Inter-Individual Correlations and Its Relationship With a Platelet Proteome." Blood 122, no. 21 (November 15, 2013): 2297. http://dx.doi.org/10.1182/blood.v122.21.2297.2297.
Full textZahavi, Tamar, Gil Stelzer, Lior Strauss, Asher Y. Salmon, and Mali Salmon-Divon. "VennBLAST—Whole transcriptome comparison and visualization tool." Genomics 105, no. 3 (March 2015): 131–36. http://dx.doi.org/10.1016/j.ygeno.2014.12.004.
Full textLiu, Dandan, Zhengxi Li, and Maolin Hou. "Comparison of Transcriptome Responses between Sogatella furcifera Females That Acquired Southern Rice Black-Streaked Dwarf Virus and Not." Insects 13, no. 2 (February 9, 2022): 182. http://dx.doi.org/10.3390/insects13020182.
Full textBaranwal, Vinay Kumar, Nisha Negi, and Paramjit Khurana. "Comparative transcriptomics of leaves of five mulberry accessions and cataloguing structural and expression variants for future prospects." PLOS ONE 16, no. 7 (July 14, 2021): e0252246. http://dx.doi.org/10.1371/journal.pone.0252246.
Full textSseruwagi, Peter, James Wainaina, Joseph Ndunguru, Robooni Tumuhimbise, Fred Tairo, Jian-Yang Guo, Alice Vrielink, et al. "The first transcriptomes from field-collected individual whiteflies (Bemisia tabaci, Hemiptera: Aleyrodidae)." Gates Open Research 1 (December 28, 2017): 16. http://dx.doi.org/10.12688/gatesopenres.12783.1.
Full textSseruwagi, Peter, James Wainaina, Joseph Ndunguru, Robooni Tumuhimbise, Fred Tairo, Jian-Yang Guo, Alice Vrielink, et al. "The first transcriptomes from field-collected individual whiteflies (Bemisia tabaci, Hemiptera: Aleyrodidae)." Gates Open Research 1 (February 13, 2018): 16. http://dx.doi.org/10.12688/gatesopenres.12783.2.
Full textSseruwagi, Peter, James Wainaina, Joseph Ndunguru, Robooni Tumuhimbise, Fred Tairo, Jian-Yang Guo, Alice Vrielink, et al. "The first transcriptomes from field-collected individual whiteflies (Bemisia tabaci, Hemiptera: Aleyrodidae): a case study of the endosymbiont composition." Gates Open Research 1 (March 8, 2018): 16. http://dx.doi.org/10.12688/gatesopenres.12783.3.
Full textGutierrez-Gonzalez, Juan J., Pedro García, Carlos Polanco, Ana Isabel González, Francisca Vaquero, Francisco Javier Vences, Marcelino Pérez de la Vega, and Luis E. Sáenz de Miera. "Multi-Species Transcriptome Assemblies of Cultivated and Wild Lentils (Lens sp.) Provide a First Glimpse at the Lentil Pangenome." Agronomy 12, no. 7 (July 5, 2022): 1619. http://dx.doi.org/10.3390/agronomy12071619.
Full textChen, L., J. Luo, J. X. Li, J. J. Li, D. Q. Wang, Y. Tian, and L. Z. Lu. "Transcriptome analysis of adiposity in domestic ducks by transcriptomic comparison with their wild counterparts." Animal Genetics 46, no. 3 (April 27, 2015): 299–307. http://dx.doi.org/10.1111/age.12294.
Full textMorcillo, Rafael, Juan Vílchez, Song Zhang, Richa Kaushal, Danxia He, Hailing Zi, Renyi Liu, Karsten Niehaus, Avtar Handa, and Huiming Zhang. "Plant Transcriptome Reprograming and Bacterial Extracellular Metabolites Underlying Tomato Drought Resistance Triggered by a Beneficial Soil Bacteria." Metabolites 11, no. 6 (June 9, 2021): 369. http://dx.doi.org/10.3390/metabo11060369.
Full textCordoba, Javier, Emilie Perez, Mick Van Vlierberghe, Amandine R. Bertrand, Valérian Lupo, Pierre Cardol, and Denis Baurain. "De Novo Transcriptome Meta-Assembly of the Mixotrophic Freshwater Microalga Euglena gracilis." Genes 12, no. 6 (May 29, 2021): 842. http://dx.doi.org/10.3390/genes12060842.
Full textWeirather, Jason L., Mariateresa de Cesare, Yunhao Wang, Paolo Piazza, Vittorio Sebastiano, Xiu-Jie Wang, David Buck, and Kin Fai Au. "Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis." F1000Research 6 (February 3, 2017): 100. http://dx.doi.org/10.12688/f1000research.10571.1.
Full textWeirather, Jason L., Mariateresa de Cesare, Yunhao Wang, Paolo Piazza, Vittorio Sebastiano, Xiu-Jie Wang, David Buck, and Kin Fai Au. "Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis." F1000Research 6 (June 19, 2017): 100. http://dx.doi.org/10.12688/f1000research.10571.2.
Full textPenin, Aleksey A., Anna V. Klepikova, Artem S. Kasianov, Evgeny S. Gerasimov, and Maria D. Logacheva. "Comparative Analysis of Developmental Transcriptome Maps of Arabidopsis thaliana and Solanum lycopersicum." Genes 10, no. 1 (January 15, 2019): 50. http://dx.doi.org/10.3390/genes10010050.
Full textWall, P. Kerr, Jim Leebens-Mack, André S. Chanderbali, Abdelali Barakat, Erik Wolcott, Haiying Liang, Lena Landherr, et al. "Comparison of next generation sequencing technologies for transcriptome characterization." BMC Genomics 10, no. 1 (2009): 347. http://dx.doi.org/10.1186/1471-2164-10-347.
Full textLAUN, P., L. RAMACHANDRAN, S. JAROLIM, E. HERKER, P. LIANG, J. WANG, M. WEINBERGER, D. BURHANS, B. SUTER, and F. MADEO. "A comparison of the aging and apoptotic transcriptome of." FEMS Yeast Research 5, no. 12 (December 2005): 1261–72. http://dx.doi.org/10.1016/j.femsyr.2005.07.006.
Full textBeisser, Daniela, Nadine Graupner, Christina Bock, Sabina Wodniok, Lars Grossmann, Matthijs Vos, Bernd Sures, Sven Rahmann, and Jens Boenigk. "Comprehensive transcriptome analysis provides new insights into nutritional strategies and phylogenetic relationships of chrysophytes." PeerJ 5 (January 10, 2017): e2832. http://dx.doi.org/10.7717/peerj.2832.
Full textAlamri, Ahmad M., Keunsoo Kang, Svenja Groeneveld, Weisheng Wang, Xiaogang Zhong, Bhaskar Kallakury, Lothar Hennighausen, Xuefeng Liu, and Priscilla A. Furth. "Primary cancer cell culture: mammary-optimized vs conditional reprogramming." Endocrine-Related Cancer 23, no. 7 (July 2016): 535–54. http://dx.doi.org/10.1530/erc-16-0071.
Full textKim, Tae Kyoo, Sangjoon Lee, and Heh-In Im. "Quantitative Sequencing Analysis of the Striatal Transcriptome in a Mouse Model of Alzheimer Disease." International Neurourology Journal 26, Suppl 2 (November 30, 2022): S117–125. http://dx.doi.org/10.5213/inj.2244256.128.
Full textZheng, Yi, and Fangqing Zhao. "Visualization of circular RNAs and their internal splicing events from transcriptomic data." Bioinformatics 36, no. 9 (January 17, 2020): 2934–35. http://dx.doi.org/10.1093/bioinformatics/btaa033.
Full textArakelyan, Arsen, Lilit Nersisyan, Maria Nikoghosyan, Siras Hakobyan, Arman Simonyan, Lydia Hopp, Henry Loeffler-Wirth, and Hans Binder. "Transcriptome-Guided Drug Repositioning." Pharmaceutics 11, no. 12 (December 12, 2019): 677. http://dx.doi.org/10.3390/pharmaceutics11120677.
Full textMcGettigan, P. A., J. A. Browne, S. D. Carrington, M. A. Crowe, T. Fair, N. Forde, B. J. Loftus, et al. "Fertility and genomics: comparison of gene expression in contrasting reproductive tissues of female cattle." Reproduction, Fertility and Development 28, no. 2 (2016): 11. http://dx.doi.org/10.1071/rd15354.
Full textNührenberg, Thomas G., Jasmin Stöckle, Federico Marini, Mark Zurek, Björn A. Grüning, Vladimir Benes, Lutz Hein, et al. "Impact of high platelet turnover on the platelet transcriptome: Results from platelet RNA-sequencing in patients with sepsis." PLOS ONE 17, no. 1 (January 27, 2022): e0260222. http://dx.doi.org/10.1371/journal.pone.0260222.
Full textHuang, Xiaohua, Zhongshi Huang, Zhongheng Wei, Yun Feng, Xuebin Li, Anding Xu, and Chongdong Jian. "Transcriptome Comparison of Brain and Kidney Endothelial Cells in Homeostasis." BioMed Research International 2022 (January 28, 2022): 1–10. http://dx.doi.org/10.1155/2022/5239255.
Full textLiu, Yanan, Baoju Wang, Lu Wang, Vikash Vikash, Qin Wang, Michael Roggendorf, Mengji Lu, Dongliang Yang, and Jia Liu. "Transcriptome Analysis and Comparison of Marmota monax and Marmota himalayana." PLOS ONE 11, no. 11 (November 2, 2016): e0165875. http://dx.doi.org/10.1371/journal.pone.0165875.
Full textBrophy, R. H., B. Zhang, L. Cai, R. W. Wright, L. J. Sandell, and M. F. Rai. "Transcriptome comparison of meniscus from patients with and without osteoarthritis." Osteoarthritis and Cartilage 26, no. 3 (March 2018): 422–32. http://dx.doi.org/10.1016/j.joca.2017.12.004.
Full textNa, Hye-Won, Kyu Han Kim, Changjo Jung, Tae Ryong Lee, and Hyoung-June Kim. "Transcriptome comparison of air pollutants-induced effects on human keratinocytes." Toxicology Letters 280 (October 2017): S159. http://dx.doi.org/10.1016/j.toxlet.2017.07.446.
Full textChen, Xuan, Yang Hu, Huoqing Zheng, Lianfei Cao, Defang Niu, Dongliang Yu, Yongqiao Sun, Songnian Hu, and Fuliang Hu. "Transcriptome comparison between honey bee queen- and worker-destined larvae." Insect Biochemistry and Molecular Biology 42, no. 9 (September 2012): 665–73. http://dx.doi.org/10.1016/j.ibmb.2012.05.004.
Full textLiu, Sian, Hanyue Zhang, and Yingdan Yuan. "A Comparison of the Flavonoid Biosynthesis Mechanisms of Dendrobium Species by Analyzing the Transcriptome and Metabolome." International Journal of Molecular Sciences 23, no. 19 (October 9, 2022): 11980. http://dx.doi.org/10.3390/ijms231911980.
Full textAmbrosino, Luca, and Maria Luisa Chiusano. "Transcriptologs: A Transcriptome-Based Approach to Predict Orthology Relationships." Bioinformatics and Biology Insights 11 (January 1, 2017): 117793221769013. http://dx.doi.org/10.1177/1177932217690136.
Full textMaster, Adam, Apostolos Kontzias, Liqun Huang, Wei Huang, Anna Tsioulias, Samaneh Zarabi, Michael Wolek, Brian M. Wollocko, Robert Honkanen, and Basil Rigas. "The transcriptome of rabbit conjunctiva in dry eye disease: Large-scale changes and similarity to the human dry eye." PLOS ONE 16, no. 7 (July 29, 2021): e0254036. http://dx.doi.org/10.1371/journal.pone.0254036.
Full textŠķipars, Vilnis, and Dainis Ruņģis. "Transcript Dynamics in Wounded and Inoculated Scots Pine." International Journal of Molecular Sciences 22, no. 4 (February 3, 2021): 1505. http://dx.doi.org/10.3390/ijms22041505.
Full textHuang, Lan, Yaodong Hu, Qixin Guo, Guobin Chang, and Hao Bai. "Time-Course Transcriptome Landscape of Bursa of Fabricius Development and Degeneration in Chickens." Agriculture 12, no. 8 (August 10, 2022): 1194. http://dx.doi.org/10.3390/agriculture12081194.
Full textZhang, Yin, Khor Waiho, Mhd Ikhwanuddin, and Hongyu Ma. "Identification of Sex-Related Genes from the Three-Spot Swimming Crab Portunus sanguinolentus and Comparative Analysis with the Crucifix Crab Charybdis feriatus." Animals 11, no. 7 (June 29, 2021): 1946. http://dx.doi.org/10.3390/ani11071946.
Full textTakami, Hirokazu, Asmaa Elzawahry, Yasin Mamatjan, Mamoru Kato, Natsuko Hama, Tatsuhiro Shibata, Yoichi Nakazato, Ryo Nishikawa, Masao Matsutani, and Koichi Ichimura. "GCT-09. Transcriptome and methylome profiles of CNS germ cell tumors and their comparison with testicular counterpart." Neuro-Oncology 24, Supplement_1 (June 1, 2022): i56. http://dx.doi.org/10.1093/neuonc/noac079.203.
Full textHou, Chen, Richard M. K. Saunders, Nan Deng, Tao Wan, and Yingjuan Su. "Pollination Drop Proteome and Reproductive Organ Transcriptome Comparison in Gnetum Reveals Entomophilous Adaptation." Genes 10, no. 10 (October 12, 2019): 800. http://dx.doi.org/10.3390/genes10100800.
Full textBelenchia, Anthony M., Madhavi P. Gavini, Ryan G. Toedebusch, Vincent G. DeMarco, and Lakshmi Pulakat. "Comparison of Cardiac miRNA Transcriptomes Induced by Diabetes and Rapamycin Treatment and Identification of a Rapamycin-Associated Cardiac MicroRNA Signature." Oxidative Medicine and Cellular Longevity 2018 (December 17, 2018): 1–18. http://dx.doi.org/10.1155/2018/8364608.
Full textAlloisio, Nicole, Clothilde Queiroux, Pascale Fournier, Petar Pujic, Philippe Normand, David Vallenet, Claudine Médigue, Masatoshi Yamaura, Kentaro Kakoi, and Ken-ichi Kucho. "The Frankia alni Symbiotic Transcriptome." Molecular Plant-Microbe Interactions® 23, no. 5 (May 2010): 593–607. http://dx.doi.org/10.1094/mpmi-23-5-0593.
Full textYang, Yong, Chunfang Zheng, Cairong Zhong, Tianxi Lu, Juma Gul, Xiang Jin, Ying Zhang, and Qiang Liu. "Transcriptome analysis of Sonneratia caseolaris seedlings under chilling stress." PeerJ 9 (June 3, 2021): e11506. http://dx.doi.org/10.7717/peerj.11506.
Full textWU, M., S. FU, W. JIN, W. Z. XIANG, W. C. ZHANG, and L. CHEN. "Transcriptome comparison of physiological divergence between two ecotypes of Portulaca oleracea." Biologia plantarum 65 (July 29, 2021): 212–20. http://dx.doi.org/10.32615/bp.2021.012.
Full textSingleton, Sarah A., Gessica Franco-Johannsen, Gabriela Dalmaso, M. Sofia Ortega, and Ky G. Pohler. "27 Transcriptome Comparison of Parthenogenetic vs. Biparental Embryos in Beef Cattle." Journal of Animal Science 100, Supplement_1 (March 8, 2022): 9. http://dx.doi.org/10.1093/jas/skac028.016.
Full textGulick, Patrick J., Simon Drouin, Zhihua Yu, Jean Danyluk, Guylaine Poisson, Antonio F. Monroy, and Fathey Sarhan. "Transcriptome comparison of winter and spring wheat responding to low temperature." Genome 48, no. 5 (October 1, 2005): 913–23. http://dx.doi.org/10.1139/g05-039.
Full textMao, B., X. Xu, G. Sheng, W. Qian, and H. Q. Li. "Transcriptome comparison among patients, PDX, PDO, PDXO, PDXC and cell lines." European Journal of Cancer 138 (October 2020): S31. http://dx.doi.org/10.1016/s0959-8049(20)31151-5.
Full textJeong, Jaesik, Robert Audet, Jenny Chang, Helen Wong, Scooter Willis, Brandon Young, Susan Edgerton, et al. "A comparison between DASL and Affymetrix on probing the whole-transcriptome." Journal of the Korean Statistical Society 45, no. 1 (March 2016): 149–55. http://dx.doi.org/10.1016/j.jkss.2015.09.001.
Full textVinogradov, Alexander E., and Olga V. Anatskaya. "Cell‐cycle dependence of transcriptome gene modules: comparison of regression lines." FEBS Journal 287, no. 20 (March 5, 2020): 4427–39. http://dx.doi.org/10.1111/febs.15257.
Full textBell, Achim H., Franco DeMonte, Shaan M. Raza, Laurence D. Rhines, Claudio E. Tatsui, Victor G. Prieto, Gregory N. Fuller, and Diana Bell. "Transcriptome comparison identifies potential biomarkers of spine and skull base chordomas." Virchows Archiv 472, no. 3 (August 27, 2017): 489–97. http://dx.doi.org/10.1007/s00428-017-2224-x.
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