Academic literature on the topic 'Toom model'

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Journal articles on the topic "Toom model"

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Ayyer, Arvind. "A finite variant of the Toom Model." Journal of Physics: Conference Series 638 (September 3, 2015): 012005. http://dx.doi.org/10.1088/1742-6596/638/1/012005.

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Barabási, Albert-László, Mariela Araujo, and H. Eugene Stanley. "Three-dimensional Toom model: Connection to the anisotropic Kardar-Parisi-Zhang equation." Physical Review Letters 68, no. 25 (June 22, 1992): 3729–32. http://dx.doi.org/10.1103/physrevlett.68.3729.

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Shapira, Assaf, and Kay Jörg Wiese. "Anchored advected interfaces, Oslo model, and roughness at depinning." Journal of Statistical Mechanics: Theory and Experiment 2023, no. 6 (June 1, 2023): 063202. http://dx.doi.org/10.1088/1742-5468/acd2bb.

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Abstract There is a plethora of one-dimensional advected systems with an absorbing boundary: the Toom model of anchored interfaces, the directed exclusion process where in addition to diffusion particles and holes can jump over their right neighbour, simple diffusion with advection, and Oslo sandpiles. All these models share a roughness exponent of ζ = 1 / 4 , while the dynamic exponent z varies, depending on the observable. We show that for the first three models z = 1, z = 2, and z = 1 / 2 are realized, depending on the observable. The Oslo model is apart with a conjectured dynamic exponent of z = 10 / 7 . Since the height in the latter is the gradient of the position of a disordered elastic string, this shows that ζ = 5 / 4 for a driven elastic string at depinning.
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Hutchins, M., K. Urama, E. Penning, J. Icke, C. Dilks, T. Bakken, C. Perrin, T. Saloranta, L. Candela, and J. Kämäri. "The model evaluation tool: guidance for applying benchmark criteria for models to be used in river basin management." River Systems 17, no. 1-2 (July 28, 2006): 23–48. http://dx.doi.org/10.1127/lr/17/2006/23.

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Icke, J., K. J. van Heeringen, S. Groot, and M. Ouboter. "Model Evaluation Tool experiences for the Amstel River." River Systems 17, no. 1-2 (July 28, 2006): 97–113. http://dx.doi.org/10.1127/lr/17/2006/97.

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Denpaiboon, Chaweewan, and Pornchai Jantaworn. "Structural Equation Models for Building Awareness and Acceptance of Public Participation in Thailand’s Comprehensive Urban Planning Procedures." Journal of Architectural/Planning Research and Studies (JARS) 13, no. 2 (December 30, 2016): 57–68. http://dx.doi.org/10.56261/jars.v13i2.81274.

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A comprehensive planning procedure is the key for urban development. It is considered as a highly concrete approach to enable the enforcement of a comprehensive urban plan, which indicates the future direction of urban development. This study aims to develop Structural Equation Modelling (SEM) to build perception and acceptance in civic society to participate in the comprehensive planning procedure of the SEM technique. Factors were identified that affect the perception and acceptance of public participation in urban planning procedures. The Baan Bueng District of Chonburi Province and the Khok Toom Community in Lopburi Province were selected as case studies because these areas were operating with comprehensive planning procedures at the time of the study. The study argued that planning model combines with participatory approach plays an important role in filling this gap. This method of planning procedures will need to be adapted with existing factors and influences in urban setting. A literature review of these factors was conducted to explain the empirical results that indicated most people lacked a knowledge and access to the information of urban planning to prepare for participation process. This study focuses on those residents who receive information or attitude to accept on a comprehensive urban planning procedures, which SEM is an instrument for analyzing development process in their areas and to participate in a comprehensive plan. From a preliminary analysis of the social-economic group with participation factors. The results showed that there is contras variation in negative with attitudes and accept of the urban planning procedures. In principle of a statistically significant result considering from the group’s participants in the planning procedures. The Respondents are volunteer group of community and elderly group, who had less education and unstable career prepared to the working group did not participate in any activities. Hence, people participation is the key in development of urban planning procedures, which stakeholders must participate in order to accept in the urban planning process. This forms of participation process in currently process is currently in progress, is considered at the first stages of participation concept and most abstract, affect in lower perception and acknowledgement of participation. In performing the many tasks required in this process the planning procedure is costly both in terms of processing time and budget. Local administrative agencies still need concrete decision-making tools and measures to overcome difficulties and obstacles.
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Broszkiewicz-Suwaj, Ewa, and Leszek Kuchar. "RAINFALL DERIVATIVES AS A RISK MANAGEMENT TOOL FOR GRAIN PRODUCERS: DAILY MODEL VS. INDEX MODEL." Acta Scientiarum Polonorum Formatio Circumiectus 19, no. 1 (April 20, 2020): 13–20. http://dx.doi.org/10.15576/asp.fc/2020.19.1.13.

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Jinnah, H. A., Vladimir Neychev, and Ellen J. Hess. "The Anatomical Basis for Dystonia: The Motor Network Model." Tremor and Other Hyperkinetic Movements 7 (October 23, 2017): 506. http://dx.doi.org/10.5334/tohm.383.

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Lee, Jihyun, Inyong Kim, Jeyeon Lee, Emily Knight, Lei Cheng, Shin Il Kang, Dong Pyo Jang, and Su-Youne Chang. "Development of Harmaline-induced Tremor in a Swine Model." Tremor and Other Hyperkinetic Movements 8 (March 13, 2018): 532. http://dx.doi.org/10.5334/tohm.406.

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Sciandra, M., and A. Plaia. "A graphical model selection tool for mixed models." Communications in Statistics - Simulation and Computation 47, no. 9 (August 23, 2017): 2624–38. http://dx.doi.org/10.1080/03610918.2017.1353617.

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Dissertations / Theses on the topic "Toom model"

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Jones, Thomas Carroll Jr. "JigCell Model Connector: Building Large Molecular Network Models from Components." Thesis, Virginia Tech, 2017. http://hdl.handle.net/10919/78277.

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The ever-growing size and complexity of molecular network models makes them difficult to construct and understand. Modifying a model that consists of tens of reactions is no easy task. Attempting the same on a model containing hundreds of reactions can seem nearly impossible. We present the JigCell Model Connector, a software tool that supports large-scale molecular network modeling. Our approach to developing large models is to combine together smaller models, making the result easier to comprehend. At the base, the smaller models (called modules) are defined by small collections of reactions. Modules connect together to form larger modules through clearly defined interfaces, called ports. In this work, we enhance the port concept by defining different types of ports. Not all modules connect together the same way, therefore multiple connection options need to exist.
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Carmona, Bardella Ana. "Combining Discrete Element and Process-based sedimentary models: a new tool to model syntectonic sedimentation." Doctoral thesis, Universitat de Barcelona, 2016. http://hdl.handle.net/10803/401652.

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In order to understand the current state of the natural rocky environment and its heterogeneity, we require to study the interaction and time evolution of the numerous geological processes that have contributed to the geological reality we observe today. Given this, the thesis presented here concerns itself with numerical modelling of geological processes. The forward numerical model developed during this thesis is able to simulate deformation and sedimentation in one single setting. To do this, the model uses a novel approach that combines a Discrete Element Model (DEM) and a process- based sedimentary model, Simsafadim (SFM) to link both processes, deformation and sedimentation. The discrete element model (DEM) deals with the simulation of deformation in different materials in 2D and 3D. It is primarily used to investigate the propagation and evolution of deformation in the upper crust caused by tectonic movements. Simsafadim (SFM) is a process-based numerical forward model, which simulates subaqueous clastic transport and sedimentation in three dimensions, including processes of carbonate interaction, production, transport and sedimentation. It can model efficiently the distribution of facies and the depositional architectures in a sedimentary basin and it is a powerful tool for the 3D prediction of stratigraphic structures. Merging both codes provides a new tool for geological modelling in which deformation is influenced by the presence of syntectonic sediment dispersal and deposition. In addition, the tectonic processes change the topographic surface, which influences fluid flow, transport and, consequently, sedimentation in the process-based sedimentary model. The interaction of tectonic and sedimentary processes allows us to study the propagation of deformation in the syntectonic materials as well as how these new sediments influence the propagation of deformation in the pretectonic unit. The model is applied in two different cases studies, in order to test the viability of the new model, as well as to achieve new insight in the respective themes treated: 1) First case study: the effect of normal faulting and a relay ramp on sediment dispersal. The model is used to study the sedimentary infill in an extensional basin, specifically related to a relay ramp system. To perform the test study two configurations are designed: with one normal fault, and with two overlapping normal faults linked by a relay ramp. The different results show that the source area location in relation to the available accommodation space plays the major role in the distribution of different sediment types into the basin. Nonetheless, when the source area for water and sediment is defined as regional and parallel to the fault, the grain size distribution obtained by the two overlapping faults linked by a relay ramp have clear asymmetries when compared with the ones obtained by one-fault configurations. Therefore, the different extensional experiments allow us to conclude that the configuration with a relay ramp can play an important role in the distribution of the sediments into the basin. 2) Second case study: The effect of syntectonic sedimentation on fold geometry The numerical is used to investigate the effect of syntectonic sedimentation on fold geometry and specifically related to a delta progradation surrounded by two growing anticlines. To the initial tectonic configuration that reproduces the growth of two faults, two different cases of the sedimentary model are considered: without sediments, and considering syntectonic sedimentation. Summing up, the main results obtained for these experiments conclude that the syntectonic sedimentation is controlling the mechanism of fold growth and the final fold geometry: the left-side fold shows a left-vergent asymmetric anticline. Moreover, the strain suggests that this anticline is passing from a detachment fold (without sediments) to a fault propagation fold basinwards (with sediments). As a consequence, the inner syncline and the related sedimentary basin are also changing in transversal and longitudinal direction, being wider with syntectonic sedimentation.
El objectiu principal d'aquesta tesi és donar un pas endavant en el coneixement dels processos geològics que intervenen en la formació de les conques sedimentàries mitjançant la creació d'un model numèric per modelitzar la sedimentació sintectònica en un ambient subaquàtic. El model numèric desenvolupat en aquesta tesi és capaç de modelitzar la sedimentació clàstica subaquàtica i la deformació de la unitat pretectònica en una sola configuració. Per fer això, el model combina dos models ja existents: un model d'elements discrets per simular la deformació de la unitat pretectònica (DEM) i un model sedimentari basat en processos, per modelitzar la sedimentació clàstica subaquàtica Simsafadim (SFM). La unió d'aquest dos models, DEM i SFM, proporciona una nova eina per a la modelització geològica. En el nou model, l’evolució de deformació en la unitat pretectònica canviarà la topografia de la conca, que afectarà directament la batimetria, influenciant així els processos de transport i sedimentació que hi tenen lloc. Alhora, aquesta evolució de la deformació de la unitat pretectònica estarà influenciada per la presència dels nous materials sintectònics. Amb aquesta doble interacció tectònica-sedimentària del nou model, també es pot estudiar la deformació en els materials sintectònics. Aquesta nova eina de modelització permet simular i analitzar diferents arquitectures deposicionals sintectòniques i escenaris geològics més complexos. Tant per ampliar el coneixement de com els processos de sedimentació-deformació interactuen en alguns ambients tectònics, com per comprovar l'eficàcia del model, la nova eina s'aplica a dos casos diferents: 1) En primer lloc s'utilitza el model numèric en un ambient extensional per estudiar l'impacte que té la presència de falles normals i les corresponents zones de relleu en la distribució del sediment a la conca. Quan es compara la distribució de sediment obtinguda amb una configuració de dos falles amb una rapa de relleu, amb la distribució de sediment obtinguda amb una configuració d'una sola falla, els resultats mostren asimetries, tant longitudinals com perpendiculars a les estructures. 2) En el segon cas s'estudia l'efecte de la sedimentació sintectònica sobre la geometria final d'un plec. Els resultats, obtinguts a partir de la comparació de l'evolució de les estructures considerant o no considerant sedimentació sintectònica, estableixen que la sedimentació sintectònica pot afectar tant al mecanisme de formació del plec com a la seva geometria final.
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Sarrazin, Pierre. "Reengineering a process model generalisation tool." Thesis, National Library of Canada = Bibliothèque nationale du Canada, 1997. http://www.collectionscanada.ca/obj/s4/f2/dsk2/ftp04/mq29777.pdf.

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Sarrazin, Pierre 1971. "Reengineering a process model generalisation tool." Thesis, McGill University, 1996. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=27402.

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A large organization that has many projects to manage may want to build a model that gives an overview of the common and variable parts of its projects' processes. This action is process model generalisation. The McGill Software Engineering Laboratory has developed a technique and a tool to achieve that. The work described in this thesis consisted of reengineering the tool to give it a longer life expectancy and to make it part of a future client-server architecture suitable for developing a suite of process management tools. The tool was effectively reengineered and this helped the laboratory define the architecture better. Also, some lessons about software maintenance were learned.
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SILVA, THAIS ROSA DA. "A SUPPLY CHAIN MATURITY MODEL TOOL." PONTIFÍCIA UNIVERSIDADE CATÓLICA DO RIO DE JANEIRO, 2018. http://www.maxwell.vrac.puc-rio.br/Busca_etds.php?strSecao=resultado&nrSeq=36265@1.

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O mercado competitivo exige sistematicamente custos reduzidos e mais flexibilidade das organizações contemporâneas que, por sua vez, podem alcançar melhores resultados ao focarem no desenvolvimento de suas cadeias de suprimento. Sendo assim, os modelos de maturidade em supply chain se apresentam como aliados no processo de alavancagem das organizações. Apesar do crescente número de modelos neste campo de conhecimento, a literatura aponta para uma lacuna na criação de modelos híbridos, adaptativos e que se predispõem a medir a cadeia de suprimentos de forma ampla. A partir desta carência, o objetivo desta dissertação foi desenvolver um modelo de maturidade em gestão de cadeias de suprimentos com uma ferramenta de medição associada. Para isso, foi desenvolvida uma metodologia subdividida em três fases, abrangendo: os estudos introdutórios, a pesquisa bibliográfica e o desenvolvimento efetivo do modelo e ferramenta. O resultado desta pesquisa foi a criação do produto tecnológico, com registro no Instituto Nacional da Propriedade Industrial (INPI), Supply Chain Management Maturity Model (SCM3). SCM3 é um modelo de caráter interdisciplinar, multidimensional e composto por 6 dimensões de aplicação: gestão de fornecedores, gestão da operação e clientes, gestão das atividades logísticas, recursos humanos, sistemas tecnológicos e sistema de medição de performance. O SCM3 utiliza o conceito de pontos chave de transição para mudança de nível de maturidade, o que confere maior pragmatismo ao modelo. A operacionalização deste modelo exigiu também o desenvolvimento de um método de apoio às organizações para sua implantação. O protótipo de ferramenta computacional associada ao SCM3 gera resultados compatíveis e comparáveis, reunindo 153 questões e 5 funcionalidades. A etapa de validação do modelo contou com a participação de especialista tanto do mercado, quanto da academia, que avaliaram aspectos inerentes à interface, conteúdo, encadeamento lógico, viabilidade e aceitabilidade do modelo. O modelo foi aplicado em ambiente organizacional em duas grandes empresas, líderes do setor de telecomunicações brasileiro, contando com a participação da camada gerencial das companhias. A aplicação se demonstrou relevante para organizações e acadêmicos, sendo capaz de realizar inúmeras análises para organizações alavancarem suas cadeias e apoiar estudo futuros de benchmarking em maturidade em supply chain.
The competitive marketplace systematically demands reduced costs and more flexibility from contemporary organizations which, in turn, can achieve better results by focusing on the development of their supply chains. Thus, supply chain maturity models present themselves as allies in the leverage process of organizations. Despite the increasing number of models in this field of knowledge, the literature points to a gap in the creation of hybrid, adaptive models that are predisposed to measure the supply chain in a broad way. From this gap, the objective of this dissertation was to develop a maturity model in supply chain management with an associated measurement tool. For this, a methodology was developed subdivided in three phases, covering: the introductory studies, the bibliographical research and the effective development of the model and tool. The result of this research was the creation of the technological product, with registration in the National Institute of Industrial Property (INPI), Supply Chain Management Maturity Model (SCM3). SCM3 is interdisciplinary, multidimensional and composed of 6 application dimensions: supplier management, operation and customer management, logistic activities management, human resources, technological systems and performance measurement system. The SCM3 uses the concept of turning points to change maturity level, which confers greater pragmatism to the model. The operationalization of this model also required the development of a method to support organizations for the implementation. The computational tool prototype associated to SCM3 generates compatible and comparable results, gathering 153 questions and 5 functionalities. The validation stage of the model was attended by specialists from both the market and academy, who evaluated aspects inherent to the interface, content, logical linkage, viability and acceptability of the model. The model was applied in an organizational environment in two large companies, leaders of the Brazilian telecommunications sector, counting with the participation of the managerial layer of the companies. The application has proved to be relevant for organizations and academics, being able to perform numerous analyzes for organizations to leverage their chains and support future benchmarking studies in supply chain maturity.
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Buscaroli, Nicolò. "Il tool PRISM+." Bachelor's thesis, Alma Mater Studiorum - Università di Bologna, 2022.

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La blockchain è una delle tecnologie più innovative e importanti comparse negli ultimi tempi nel campo dell’informatica. Prism+ è uno strumento che permette di fare analisi probabilistiche ed analizzare il comportamento di modelli di protocolli blockchain. Dopo una breve introduzione, per prima cosa si espone in generale l’argomento della blockchain, enunciando le caratteristiche e gli utilizzi più importanti di questa tecnologia. In seguito viene trattato Prism, strumento che permette di fare analisi su modelli probabilistici, utilizzato per sistemi di diversi campi d’applicazione. Questa sezione si divide in diverse parti: nella descrizione del linguaggio PRISM, che serve per costruire un modello probabilistico analizzabile dal tool; nella spiegazione del linguaggio di specifica delle proprietà necessario per far sì che Prism possa valutare diverse proprietà del modello creato; nella descrizione di un esempio di utilizzo dello strumento Prism, utile per una comprensione diretta del funzionamento del tool. Successivamente si passa alla discussione su Prism+, evoluzione di Prism il cui scopo principale è permettere l’analisi probabilistica di modelli di protocolli blockchain. Questa sezione si divide in due parti: esposizione delle strutture dati aggiunte in Prism+ rispetto a Prism; descrizione delle operazioni possibili tra queste nuove strutture dati. In seguito si riporta un esempio di utilizzo di Prism+. Una breve conclusione pone fine allo scritto.
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CIRILO, ELDER JOSE REIOLI. "GENARCH: A MODEL-BASED PRODUCT DERIVATION TOOL." PONTIFÍCIA UNIVERSIDADE CATÓLICA DO RIO DE JANEIRO, 2008. http://www.maxwell.vrac.puc-rio.br/Busca_etds.php?strSecao=resultado&nrSeq=12424@1.

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PONTIFÍCIA UNIVERSIDADE CATÓLICA DO RIO DE JANEIRO
COORDENAÇÃO DE APERFEIÇOAMENTO DO PESSOAL DE ENSINO SUPERIOR
Este trabalho apresenta uma ferramenta baseada em modelos para derivação de produtos de LPSs, denominada GenArch. O objetivo principal da ferramenta é permitir que a comunidade de desenvolvimento de software tradicional, utilize conceitos e fundamentos de abordagens de LPSs na produção de seus sistemas ou partes de seus sistemas sem a necessidade do entendimento de modelos e conceitos complexos. A abordagem implementada pela ferramenta foi elaborada com base em fundamentos do desenvolvimento dirigido por modelos. Centrada na definição de três modelos (características, implementação e configuração), a ferramenta permite a derivação automática de produtos ou frameworks existentes. O trabalho também define um conjunto específico de anotações Java que possibilitam a geração automática dos modelos de derivação a partir dos elementos de implementação da arquitetura de uma LPS. A plataforma Eclipse e as tecnologia EMF e openArchitectureWare foram utilizadas como base para a implementação da ferramenta. Uma extensão da ferramenta que atende especificamente aos modelos de componente Spring e OSGi, também é proposta nessa dissertação. Tal extensão permite a instanciação automática da LPS e aplicações através de diferentes tipos de customizações, variando da configuração fina de propriedades de componentes até a seleção automática de quais componentes irão compor o produto final. Como parte de validação da abordagem, a ferramenta foi utilizada na derivação automática de três diferentes estudos de caso: (i) o framework JUnit; (ii) uma LPS de jogos J2ME; e (iii) uma aplicação web baseada em serviços. Diversas lições aprendidas e resultados do uso da ferramenta nestes três diferentes cenários são também apresentadas.
This work presents a model-based tool for product derivation, called GenArch, which aims to enable the mainstream software developer community to use the concepts and foundations of the SPL approach, without the need to understand complex concepts or models. The tool approach is build on top of model-driven development techniques. It is centered on the definition of three models (feature, implementation and configuration models), which enable the automatic instantiation of software product lines (SPLs) or frameworks. A set of specific Java annotations are also defined to allow generating automatically many of the models, based on existing implementations elements of SPL architectures. The Eclipse platform, and EMF and openArchitectureWare technologies are used as the base for the implementation of the tool. The dissertation also presents a GenArch extension that addresses the new abstractions provided by the Spring and OSGi component models. Different kinds of customizations are provided by this extension varying from fine-grained configuration of component properties to the automatic selection of components that will compose the final product. As part of the approach validation, the tool was used in the derivation of three case studies: (i) JUnit framework; (ii) a J2ME games SPL; (iii) a service oriented Web application. Several lessons learned and discussions resulting from the use of the tool also are described.
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Newby, Christopher. "Tool for Physics Beyond the Standard Model." Thesis, University of Oregon, 2016. http://hdl.handle.net/1794/20472.

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The standard model (SM) of particle physics is a well studied theory, but there are hints that the SM is not the final story. What the full picture is, no one knows, but this thesis looks into three methods useful for exploring a few of the possibilities. To begin I present a paper by Spencer Chang, Nirmal Raj, Chaowaroj Wanotayaroj, and me, that studies the Higgs boson. The scalar particle first seen in 2012 may be the vanilla SM version, but there is some evidence that its couplings are different than predicted. By means of increasing the Higgs' coupling to vector bosons and fermions, we can be more consistent with the data. Next, in a paper by Spencer Chang, Gabriel Barello, and me, we elaborate on a tool created to study dark matter (DM) direct detection. The original work by Anand. {\em et al.} focused on elastic dark matter, whereas we extended this work to include the inelastic case, where different DM mass states enter and leave the collision. We also examine several direct detection experiments with our new framework to see if DAMA's modulation can be explained while avoiding the strong constraints imposed by the other experiments. We find that there are several operators that can do this. Finally, in a paper by Spencer Chang, Gabriel Barello, and me, we study an interesting phenomenon know as kinetic mixing, where two gauge bosons can share interactions with particles even though these particles aren't charged under both gauge groups. This, in and of itself, is not new, but we discuss a different method of obtaining this mixing where instead of mixing between two Abelian groups one of the groups is Nonabelian. Using this we then see that there is an inherent mass scale in the mixing strength; something that is absent in the Abelian-Abelian case. Furthermore, if the Nonabelian symmetry is the SU$(2)_L$ of the SM then the mass scale of the physics responsible for the mixing is about 1 TeV, right around the sweet spot for detection at the LHC. This dissertation includes previously published and unpublished co-authored material.
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Gu, Wenqing. "Tool Integration: Model-based Tool Adapter Construction and Discovery Conforming to OSLC." Thesis, Uppsala universitet, Institutionen för informationsteknologi, 2012. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-169430.

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Tool Integration is a vital part in the modern IT industry. With the ever increasing complexity in reality, more tools in different domains are needed in research and development process. However, currently no vendor has a complete solution for the whole process, and no mature solution to integrate different tools together, thus tools are still used separately in the industry. Due to this separation, the same information is created more than once for different tools, which is both time wasting and error prone.This thesis is part of the research to deliver a model-based tool integration framework that helps the end user design their own scenario of tool integration and implement it with less effort by generating most common parts automatically. This thesis itself is mainly focused on tool adapters, including the model-based tool adapter construction and discovery. In the first part, a model-based tool adapter construction platform conforming to OSLC is designed and implemented, based on which, the construction process of a tool adapter is presented with an example. With this platform, most of the codes and configuration files can be generated, with the exemption of the tool specific functionalities. The tool adapter is constructed as a separate SCA component, and can be included in the SCA based tool chain with minor configuration. With SCA, the deployment of the tool adapter and future management can be largely eased. In the second part, the model-based discovery process of an unknown tool adapter conforming to OSLC and our assumptions is presented in detail. With the discovery tool, the sharing of the tool adapter is made possible, and the integration of the different tools are largely eased. An example of discover an unknown tool adapter is also included for a more clear explanation. Finally, in the meanwhile of the design and implementation of the construction platform and the discovery process, the existing Matlab/Simulink tool adapter is extended and refined to make it full compatible to the standard and our tool chain.
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Naswa, Sudhir. "Representation of Biochemical Pathway Models : Issues relating conversion of model representation from SBML to a commercial tool." Thesis, University of Skövde, School of Humanities and Informatics, 2005. http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-28.

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Background: Computational simulation of complex biological networks lies at the heart of systems biology since it can confirm the conclusions drawn by experimental studies of biological networks and guide researchers to produce fresh hypotheses for further experimental validation. Since this iterative process helps in development of more realistic system models a variety of computational tools have been developed. In the absence of a common format for representation of models these tools were developed in different formats. As a result these tools became unable to exchange models amongst them, leading to development of SBML, a standard exchange format for computational models of biochemical networks. Here the formats of SBML and one of the commercial tools of systems biology are being compared to study the issues which may arise during conversion between their respective formats. A tool StoP has been developed to convert the format of SBML to the format of the selected tool.

Results: The basic format of SBML representation which is in the form of listings of various elements of a biochemical reaction system differs from the representation of the selected tool which is location oriented. In spite of this difference the various components of biochemical pathways including multiple compartments, global parameters, reactants, products, modifiers, reactions, kinetic formulas and reaction parameters could be converted from the SBML representation to the representation of the selected tool. The MathML representation of the kinetic formula in an SBML model can be converted to the string format of the selected tool. Some features of the SBML are not present in the selected tool. Similarly, the ability of the selected tool to declare parameters for locations, which are global to those locations and their children, is not present in the SBML.

Conclusions: Differences in representations of pathway models may include differences in terminologies, basic architecture, differences in capabilities of software’s, and adoption of different standards for similar things. But the overall similarity of domain of pathway models enables us to interconvert these representations. The selected tool should develop support for unit definitions, events and rules. Development of facility for parameter declaration at compartment level by SBML and facility for function declaration by the selected tool is recommended.

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Books on the topic "Toom model"

1

Architekturmuseum, Deutsches, ed. Das Architektur Modell: Werkzeug, Fetisch, kleine Utopie = The architectural model : tool, fetish, small utopia. Frankfurt am Main: DAM, Deutsches Architekturmuseum, 2012.

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Merilinna, Janne. A tool for quality-driven architecture model transformation. [Espoo, Finland]: VTT Technical Research Centre of Finland, 2005.

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Clark, John J. Sustainable corporate growth: A model and management planning tool. New York: Quorum Books, 1989.

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Wiscombe, Tom. Objects models worlds: Tom Wiscombe Architecture. Beijing: AADCU Publishers, 2021.

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Campbell, Kit. Facilities planning model: A planning tool for developing sports facilities. London: English Sports Council, 1998.

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Metrowich, Thomas P. A model for training teachers in the TOAM-CAI innovation. [Johannesburg]: University of the Witwatersrand, 1985.

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White, Carole. Have I said too much?: My life in and out of the model agency. London: Century, 2013.

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Dede, Christopher. Designing a training tool for imaging mental models. [Houston, Tex.?]: Research Institute for Computing and Information Systems, University of Houston, Clear Lake, 1990.

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Introduction to quantitative finance: A math tool kit. Cambridge, MA: MIT Press, 2010.

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1931-, Young Robert A., and United States. Agricultural Research Service., eds. AGNPS, Agricultural Non-Point-Source Pollution Model: A watershed analysis tool. [Washington, D.C.?]: U.S. Dept. of Agriculture, Agricultural Research Service, 1987.

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Book chapters on the topic "Toom model"

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Lund, Mass Soldal, Bjørnar Solhaug, and Ketil Stølen. "The CORAS Tool." In Model-Driven Risk Analysis, 339–46. Berlin, Heidelberg: Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-12323-8_18.

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Karadag, Zekeriya, and Douglas McDougall. "Geogebra as a Cognitive Tool." In Model-Centered Learning, 169–81. Rotterdam: SensePublishers, 2011. http://dx.doi.org/10.1007/978-94-6091-618-2_12.

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Giannakopoulou, Dimitra, and Corina S. Păsăreanu. "Learning-Based Assume-Guarantee Verification (Tool Paper)." In Model Checking Software, 282–87. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005. http://dx.doi.org/10.1007/11537328_24.

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Pelánek, Radek, and Václav Rosecký. "EMMA: Explicit Model Checking Manager (Tool Presentation)." In Model Checking Software, 169–73. Berlin, Heidelberg: Springer Berlin Heidelberg, 2009. http://dx.doi.org/10.1007/978-3-642-02652-2_15.

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Ben-Ari, Mordechai. "Tool Presentation: Teaching Concurrency and Model Checking." In Model Checking Software, 6–11. Berlin, Heidelberg: Springer Berlin Heidelberg, 2009. http://dx.doi.org/10.1007/978-3-642-02652-2_5.

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Aljazzar, Husain, Florian Leitner-Fischer, Stefan Leue, and Dimitar Simeonov. "DiPro - A Tool for Probabilistic Counterexample Generation." In Model Checking Software, 183–87. Berlin, Heidelberg: Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-22306-8_13.

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Dal, Giso H., Alfons Laarman, and Peter J. F. Lucas. "ParaGnosis: A Tool for Parallel Knowledge Compilation." In Model Checking Software, 22–37. Cham: Springer Nature Switzerland, 2023. http://dx.doi.org/10.1007/978-3-031-32157-3_2.

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Gerth, Christian. "Tool Support." In Business Process Models. Change Management, 177–87. Berlin, Heidelberg: Springer Berlin Heidelberg, 2013. http://dx.doi.org/10.1007/978-3-642-38604-6_11.

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Donaldson, Alastair F., and Simon J. Gay. "Etch: An Enhanced Type Checking Tool for Promela." In Model Checking Software, 266–71. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005. http://dx.doi.org/10.1007/11537328_21.

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Garavel, Hubert, and Radu Mateescu. "SEQ.OPEN: A Tool for Efficient Trace-Based Verification." In Model Checking Software, 151–57. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004. http://dx.doi.org/10.1007/978-3-540-24732-6_11.

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Conference papers on the topic "Toom model"

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Aravantinos, Vincent, and Sudeep Kanav. "Tool Support for Live Formal Verification." In 2017 ACM/IEEE 20th International Conference on Model-Driven Engineering Languages and Systems (MODELS). IEEE, 2017. http://dx.doi.org/10.1109/models.2017.6.

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Cano-Genoves, Carlos, Emilio Insfran, and Silvia Abrahão. "A value-based goal model analysis tool." In MODELS '22: ACM/IEEE 25th International Conference on Model Driven Engineering Languages and Systems. New York, NY, USA: ACM, 2022. http://dx.doi.org/10.1145/3550356.3559089.

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Agner, Luciane T. W., and Timothy C. Lethbridge. "A Survey of Tool Use in Modeling Education." In 2017 ACM/IEEE 20th International Conference on Model-Driven Engineering Languages and Systems (MODELS). IEEE, 2017. http://dx.doi.org/10.1109/models.2017.1.

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Pasquier, Matthias, Frédéric Jouault, Matthias Brun, and Julien Pérochon. "Evaluating tool support for embedded operating system security." In MODELS '20: ACM/IEEE 23rd International Conference on Model Driven Engineering Languages and Systems. New York, NY, USA: ACM, 2020. http://dx.doi.org/10.1145/3417990.3420048.

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Basciani, Francesco, Davide Di Ruscio, Mattia D'Emidio, Daniele Frigioni, Alfonso Pierantonio, and Ludovico Iovino. "A tool for automatically selecting optimal model transformation chains." In MODELS '18: ACM/IEEE 21th International Conference on Model Driven Engineering Languages and Systems. New York, NY, USA: ACM, 2018. http://dx.doi.org/10.1145/3270112.3270123.

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Barriga, Angela, Davide Di Ruscio, Ludovico Iovino, Phuong T. Nguyen, and Alfonso Pierantonio. "An extensible tool-chain for analyzing datasets of metamodels." In MODELS '20: ACM/IEEE 23rd International Conference on Model Driven Engineering Languages and Systems. New York, NY, USA: ACM, 2020. http://dx.doi.org/10.1145/3417990.3419626.

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Harbo, Sean Kristian Remond, Emil Palmelund Voldby, Jonas Madsen, and Michele Albano. "A diagram-centric modeling tool for systems of systems." In MODELS '22: ACM/IEEE 25th International Conference on Model Driven Engineering Languages and Systems. New York, NY, USA: ACM, 2022. http://dx.doi.org/10.1145/3550356.3559093.

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Zöllner, Christian, Christian M. Adriano, Simon Wietheger, Leen Lambers, and Holger Giese. "Tool support for the teaching of state-based behavior modeling." In MODELS '22: ACM/IEEE 25th International Conference on Model Driven Engineering Languages and Systems. New York, NY, USA: ACM, 2022. http://dx.doi.org/10.1145/3550356.3556501.

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Fouche, Alexis, Florian Noyrit, Sebastien Gerard, and Maged Elaasar. "Systematic generation of standard compliant tool support of diagrammatic modeling languages." In 2015 ACM/IEEE 18th International Conference on Model Driven Engineering Languages and Systems (MODELS). IEEE, 2015. http://dx.doi.org/10.1109/models.2015.7338266.

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Kalantari, Reyhaneh, and Timothy C. Lethbridge. "Preliminary results of measuring flow experience in a software modeling tool." In MODELS '22: ACM/IEEE 25th International Conference on Model Driven Engineering Languages and Systems. New York, NY, USA: ACM, 2022. http://dx.doi.org/10.1145/3550356.3559099.

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Reports on the topic "Toom model"

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Sriraj, P. S., Kazuya Kawamura, Paul Metaxatos, Joseph Fazio, Chaitanya Pujari, Nahid Parvez Farazi, and Pooria Choobchian. Railroad-Highway Crossing Safety Improvement Evaluation and Prioritization Tool. Illinois Center for Transportation, June 2023. http://dx.doi.org/10.36501/0197-9191/23-009.

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The expected crash frequency model of Illinois Department of Transportation’s Bureau of Design and Environment needed improvement to incorporate track circuitry as well as pedestrian exposure at railroad-highway grade crossings to make the model more comprehensive. The researchers developed, calibrated, and validated three models to predict collision rates at public, at-grade railroad-highway crossings in Illinois’ six-county northeast region for prioritizing railroad-highway crossings for safety improvements. The first model updated B-factors in the existing Illinois model, which was last validated with data from 1968. The second model modified B-factors to include circuitry types given the active maximum traffic control device at the crossing and added another factor (i.e., P-factor) to account for pedestrian daily traffic using the crossing. The third model added a P-factor to the existing US Department of Transportation’s web accident prediction system model to account for daily pedestrian traffic. Using year 2018 validation data, the first model had an r2 of 0.20 with reported collision rates. The second model had an r2 of 0.58 with reported collision rates, while the existing BDE model had an r2 of 0.17 with year 2018 reported collision rates. The third model had an r2 of 0.70 with reported collision rates using 2018 validation data whereas the existing US Department of Transportation’s web-based accident prediction system model had an r2 of 0.50 using year 2018 validation data. The three models are presented in this report along with a digital tool using the second model for illustrative purposes.
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Wang, Limang, Joseph Broach, and Huajie Yang. Incorporate Emerging Travel Modes in the Regional Strategic Planning Model (RSPM) Tool. Transportation Research and Education Center (TREC), 2018. http://dx.doi.org/10.15760/trec.209.

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Lee, Y. Tina, Johannes A. Soons, and M. Alkan Donmez. Information model for machine-tool-performance tests. Gaithersburg, MD: National Institute of Standards and Technology, 2000. http://dx.doi.org/10.6028/nist.ir.6580.

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Busch, Ingrid Karin, and Rob L. Howard. Transportation Operations Model (TOM) Technical Manual. Office of Scientific and Technical Information (OSTI), November 2012. http://dx.doi.org/10.2172/1136359.

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Lasko, Kristofer, and Elena Sava. Semi-automated land cover mapping using an ensemble of support vector machines with moderate resolution imagery integrated into a custom decision support tool. Engineer Research and Development Center (U.S.), November 2021. http://dx.doi.org/10.21079/11681/42402.

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Land cover type is a fundamental remote sensing-derived variable for terrain analysis and environmental mapping applications. The currently available products are produced only for a single season or a specific year. Some of these products have a coarse resolution and quickly become outdated, as land cover type can undergo significant change over a short time period. In order to enable on-demand generation of timely and accurate land cover type products, we developed a sensor-agnostic framework leveraging pre-trained machine learning models. We also generated land cover models for Sentinel-2 (20m) and Landsat 8 imagery (30m) using either a single date of imagery or two dates of imagery for mapping land cover type. The two-date model includes 11 land cover type classes, whereas the single-date model contains 6 classes. The models’ overall accuracies were 84% (Sentinel-2 single date), 82% (Sentinel-2 two date), and 86% (Landsat 8 two date) across the continental United States. The three different models were built into an ArcGIS Pro Python toolbox to enable a semi-automated workflow for end users to generate their own land cover type maps on demand. The toolboxes were built using parallel processing and image-splitting techniques to enable faster computation and for use on less-powerful machines.
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Blundell, S. Micro-terrain and canopy feature extraction by breakline and differencing analysis of gridded elevation models : identifying terrain model discontinuities with application to off-road mobility modeling. Engineer Research and Development Center (U.S.), April 2021. http://dx.doi.org/10.21079/11681/40185.

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Elevation models derived from high-resolution airborne lidar scanners provide an added dimension for identification and extraction of micro-terrain features characterized by topographic discontinuities or breaklines. Gridded digital surface models created from first-return lidar pulses are often combined with lidar-derived bare-earth models to extract vegetation features by model differencing. However, vegetative canopy can also be extracted from the digital surface model alone through breakline analysis by taking advantage of the fine-scale changes in slope that are detectable in high-resolution elevation models of canopy. The identification and mapping of canopy cover and micro-terrain features in areas of sparse vegetation is demonstrated with an elevation model for a region of western Montana, using algorithms for breaklines, elevation differencing, slope, terrain ruggedness, and breakline gradient direction. These algorithms were created at the U.S. Army Engineer Research Center – Geospatial Research Laboratory (ERDC-GRL) and can be accessed through an in-house tool constructed in the ENVI/IDL environment. After breakline processing, products from these algorithms are brought into a Geographic Information System as analytical layers and applied to a mobility routing model, demonstrating the effect of breaklines as obstacles in the calculation of optimal, off-road routes. Elevation model breakline analysis can serve as significant added value to micro-terrain feature and canopy mapping, obstacle identification, and route planning.
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Paolinelli, Luciano, and Srdjan Nesic. PR646-173609-Z01 Water Wetting Prediction Tool for Pipeline Integrity. Chantilly, Virginia: Pipeline Research Council International, Inc. (PRCI), July 2021. http://dx.doi.org/10.55274/r0012111.

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Current approaches for pipeline integrity management, as related to internal corrosion, largely depend on Internal Corrosion Direct Assessment (ICDA) type approach. An essential part of these assessments is to predict if corrosive water phase is in direct contact with the internal pipe wall, a phenomenon commonly called "water wetting". In general, water wetting prediction models currently used by pipe integrity engineers are lagging behind the current level understanding. The Institute for Corrosion and Multiphase Technology (ICMT) at Ohio University has developed and validated a mechanistic model that combines multiphase flow and wetting physics of oil and water on steel surfaces. This work that is the outcome of many years of focused industrially sponsored research is published in the open literature. However, its implementation into an integrity management tool has not been done yet. This PRCI project is devoted to developing a tool to predict water wetting for product pipelines as well as for crude oil pipelines and flow lines, based on Ohio University's work.
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Narayanan, Badri, Thomas Hertel, and Mark Horridge. Disaggregated Data and Trade Policy Analysis: The Value of Linking Partial and General Equilibrium Models. GTAP Working Paper, July 2009. http://dx.doi.org/10.21642/gtap.wp56.

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Computable General Equilibrium (CGE) models are now routinely utilized for the evaluation of trade policy reforms, yet they are typically quite highly aggregated, which limits their usefulness to trade negotiators who are often interested in impacts at the tariff line. On the other hand, Partial Equilibrium (PE) models, which are typically used for analysis at disaggregate levels, deprive the researcher of the benefits of an economy-wide analysis, which is required to examine the overall impact of broad-based trade policy reforms. Therefore, a PE-GE, nested modeling framework has the prospect of offering an ideal tool for trade policy analysis. In this paper, we develop a PE model that captures international trade, domestic consumption and output, using Constant Elasticity of Transformation (CET) and Constant Elasticity of Substitution (CES) structures, market clearing conditions and price linkages, nested within the standard GTAP Model. In particular, we extend the welfare decomposition of Huff and Hertel (2001) to this PE-GE model in order to contrast the sources of welfare gain in PE and GE analyses. To illustrate the usefulness of this model, we examine the contentious issue of tariff liberalization in the Indian auto sector, using PE, GE and PE-GE models. Both the PE and PE-GE models show that the imports of Motorcycles and Automobiles change drastically with both unilateral and bilateral tariff liberalization by India, but the PE model does a poor job predicting the overall size and price level in the industry, post-liberalization. On the other hand, the GE model overestimates substitution between regional suppliers due to “false competition” and underestimates the welfare gain, due to the problem of tariff averaging in the aggregated model. These findings are shown to be robust to wide variation in model parameters. We conclude that the linked model is superior to both the GE and PE counterparts.
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Ansari, S. M., E. M. Schetselaar, and J. A. Craven. Three-dimensional magnetotelluric modelling of the Lalor volcanogenic massive-sulfide deposit, Manitoba. Natural Resources Canada/CMSS/Information Management, 2022. http://dx.doi.org/10.4095/328003.

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Unconstrained magnetotelluric inversion commonly produces insufficient inherent resolution to image ore-system fluid pathways that were structurally thinned during post-emplacement tectonic activity. To improve the resolution in these complex environments, we synthesized the 3-D magnetotelluric (MT) response for geologically realistic models using a finite-element-based forward-modelling tool with unstructured meshes and applied it to the Lalor volcanogenic massive-sulfide deposit in the Snow Lake mining camp, Manitoba. This new tool is based on mapping interpolated or simulated resistivity values from wireline logs onto unstructured tetrahedral meshes to reflect, with the help of 3-D models obtained from lithostratigraphic and lithofacies drillhole logs, the complexity of the host-rock geological structure. The resulting stochastic model provides a more realistic representation of the heterogeneous spatial distribution of the electric resistivity values around the massive, stringer, and disseminated sulfide ore zones. Both models were combined into one seamless tetrahedral mesh of the resistivity field. To capture the complex resistivity distribution in the geophysical forward model, a finite-element code was developed. Comparative analyses of the forward models with MT data acquired at the Earth's surface show a reasonable agreement that explains the regional variations associated with the host rock geological structure and detects the local anomalies associated with the MT response of the ore zones.
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Zhang, Yongfeng, Ian Greenquist, and Michael Tonks. Development of a UO2 Densification Model in the MARMOT Tool. Office of Scientific and Technical Information (OSTI), September 2017. http://dx.doi.org/10.2172/1473590.

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