Journal articles on the topic 'T-RFLP'
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Nagashima, Koji, Takayoshi Hisada, Maremi Sato, and Jun Mochizuki. "Application of New Primer-Enzyme Combinations to Terminal Restriction Fragment Length Polymorphism Profiling of Bacterial Populations in Human Feces." Applied and Environmental Microbiology 69, no. 2 (February 2003): 1251–62. http://dx.doi.org/10.1128/aem.69.2.1251-1262.2003.
Full textStępień-Słodkowska, Marta, Krzysztof Ficek, Mariusz Kaczmarczyk, Agnieszka Maciejewska-Karłowska, Marek Sawczuk, Agata Leońska-Duniec, Miłosz Stępiński, et al. "The Variants Within the COL5A1 Gene are Associated with Reduced Risk of Anterior Cruciate Ligament Injury in Skiers." Journal of Human Kinetics 45, no. 1 (March 1, 2015): 103–11. http://dx.doi.org/10.1515/hukin-2015-0011.
Full textASHER, A. J., L. S. WALDRON, and M. L. POWER. "Rapid identification of Giardia duodenalis assemblages in NSW using terminal-restriction fragment length polymorphism." Parasitology 139, no. 8 (March 15, 2012): 1005–13. http://dx.doi.org/10.1017/s0031182012000388.
Full textRåberg, Ulrika, Nils O. S. Högberg, and Carl Johan Land. "Detection and species discrimination using rDNA T-RFLP for identification of wood decay fungi." Holzforschung 59, no. 6 (November 1, 2005): 696–702. http://dx.doi.org/10.1515/hf.2005.111.
Full textLueders, Tillmann, and Michael W. Friedrich. "Evaluation of PCR Amplification Bias by Terminal Restriction Fragment Length Polymorphism Analysis of Small-Subunit rRNA and mcrA Genes by Using Defined Template Mixtures of Methanogenic Pure Cultures and Soil DNA Extracts." Applied and Environmental Microbiology 69, no. 1 (January 2003): 320–26. http://dx.doi.org/10.1128/aem.69.1.320-326.2003.
Full textSeldin, M. F., H. C. Morse, J. P. Reeves, C. L. Scribner, R. C. LeBoeuf, and A. D. Steinberg. "Genetic analysis of autoimmune gld mice. I. Identification of a restriction fragment length polymorphism closely linked to the gld mutation within a conserved linkage group." Journal of Experimental Medicine 167, no. 2 (February 1, 1988): 688–93. http://dx.doi.org/10.1084/jem.167.2.688.
Full textDanovaro, R., G. M. Luna, A. Dell'Anno, and B. Pietrangeli. "Comparison of Two Fingerprinting Techniques, Terminal Restriction Fragment Length Polymorphism and Automated Ribosomal Intergenic Spacer Analysis, for Determination of Bacterial Diversity in Aquatic Environments." Applied and Environmental Microbiology 72, no. 9 (September 2006): 5982–89. http://dx.doi.org/10.1128/aem.01361-06.
Full textJackson, Colin J., Richard C. Barton, and E. Glyn V. Evans. "Species Identification and Strain Differentiation of Dermatophyte Fungi by Analysis of Ribosomal-DNA Intergenic Spacer Regions." Journal of Clinical Microbiology 37, no. 4 (1999): 931–36. http://dx.doi.org/10.1128/jcm.37.4.931-936.1999.
Full textPenny, Christian, Thierry Nadalig, Malek Alioua, Christelle Gruffaz, Stéphane Vuilleumier, and Françoise Bringel. "Coupling of Denaturing High-Performance Liquid Chromatography and Terminal Restriction Fragment Length Polymorphism with Precise Fragment Sizing for Microbial Community Profiling and Characterization." Applied and Environmental Microbiology 76, no. 3 (November 30, 2009): 648–51. http://dx.doi.org/10.1128/aem.01556-09.
Full textEgert, Markus, and Michael W. Friedrich. "Formation of Pseudo-Terminal Restriction Fragments, a PCR-Related Bias Affecting Terminal Restriction Fragment Length Polymorphism Analysis of Microbial Community Structure." Applied and Environmental Microbiology 69, no. 5 (May 2003): 2555–62. http://dx.doi.org/10.1128/aem.69.5.2555-2562.2003.
Full textJernberg, Cecilia, �sa Sullivan, Charlotta Edlund, and Janet K. Jansson. "Monitoring of Antibiotic-Induced Alterations in the Human Intestinal Microflora and Detection of Probiotic Strains by Use of Terminal Restriction Fragment Length Polymorphism." Applied and Environmental Microbiology 71, no. 1 (January 2005): 501–6. http://dx.doi.org/10.1128/aem.71.1.501-506.2005.
Full textYu, Chang-Ping, Rajiv Ahuja, Gary Sayler, and Kung-Hui Chu. "Quantitative Molecular Assay for Fingerprinting Microbial Communities of Wastewater and Estrogen-Degrading Consortia." Applied and Environmental Microbiology 71, no. 3 (March 2005): 1433–44. http://dx.doi.org/10.1128/aem.71.3.1433-1444.2005.
Full textBraker, Gesche, Héctor L. Ayala-del-Rı́o, Allan H. Devol, Andreas Fesefeldt, and James M. Tiedje. "Community Structure of Denitrifiers, Bacteria, and Archaea along Redox Gradients in Pacific Northwest Marine Sediments by Terminal Restriction Fragment Length Polymorphism Analysis of Amplified Nitrite Reductase (nirS) and 16S rRNA Genes." Applied and Environmental Microbiology 67, no. 4 (April 1, 2001): 1893–901. http://dx.doi.org/10.1128/aem.67.4.1893-1901.2001.
Full textJunier, Pilar, Thomas Junier, and Karl-Paul Witzel. "TRiFLe, a Program for In Silico Terminal Restriction Fragment Length Polymorphism Analysis with User-Defined Sequence Sets." Applied and Environmental Microbiology 74, no. 20 (August 29, 2008): 6452–56. http://dx.doi.org/10.1128/aem.01394-08.
Full textAwaluddin, Awaluddin, Rizalinda Sjahrir, and Farida Ilyas. "PENGGUNAAN METODE PCR – RFLP (POLYMERASE CHAIN REACTION – RESTRICTION FRAGMENT LENGTH POLYMORFISM) DALAM MENDETEKSI JAMUR DERMATOFIT." JURNAL MEDIA KESEHATAN 14, no. 1 (June 30, 2021): 96–102. http://dx.doi.org/10.33088/jmk.v14i1.615.
Full textEngebretson, Jeff J., and Craig L. Moyer. "Fidelity of Select Restriction Endonucleases in Determining Microbial Diversity by Terminal-Restriction Fragment Length Polymorphism." Applied and Environmental Microbiology 69, no. 8 (August 2003): 4823–29. http://dx.doi.org/10.1128/aem.69.8.4823-4829.2003.
Full textHartmann, Martin, and Franco Widmer. "Community Structure Analyses Are More Sensitive to Differences in Soil Bacterial Communities than Anonymous Diversity Indices." Applied and Environmental Microbiology 72, no. 12 (October 13, 2006): 7804–12. http://dx.doi.org/10.1128/aem.01464-06.
Full textBlackwood, Christopher B., Deborah Hudleston, Donald R. Zak, and Jeffrey S. Buyer. "Interpreting Ecological Diversity Indices Applied to Terminal Restriction Fragment Length Polymorphism Data: Insights from Simulated Microbial Communities." Applied and Environmental Microbiology 73, no. 16 (June 29, 2007): 5276–83. http://dx.doi.org/10.1128/aem.00514-07.
Full textStankovic, Srdjan, Ivana Moric, Aleksandar Pavic, Branka Vasiljevic, Barrie Johnson, and Vladica Cvetkovic. "Investigation of the microbial diversity of an extremely acidic, metal-rich water body (Lake Robule, Bor, Serbia)." Journal of the Serbian Chemical Society 79, no. 6 (2014): 729–41. http://dx.doi.org/10.2298/jsc130605071s.
Full textMoeseneder, Markus M., Jesús M. Arrieta, Gerard Muyzer, Christian Winter, and Gerhard J. Herndl. "Optimization of Terminal-Restriction Fragment Length Polymorphism Analysis for Complex Marine Bacterioplankton Communities and Comparison with Denaturing Gradient Gel Electrophoresis." Applied and Environmental Microbiology 65, no. 8 (August 1, 1999): 3518–25. http://dx.doi.org/10.1128/aem.65.8.3518-3525.1999.
Full textSzékely, Anna J., Rita Sipos, Brigitta Berta, Balázs Vajna, Csaba Hajdú, and Károly Márialigeti. "DGGE and T-RFLP Analysis of Bacterial Succession during Mushroom Compost Production and Sequence-aided T-RFLP Profile of Mature Compost." Microbial Ecology 57, no. 3 (July 25, 2008): 522–33. http://dx.doi.org/10.1007/s00248-008-9424-5.
Full textFrey, Julie C., Jessica M. Rothman, Alice N. Pell, John Bosco Nizeyi, Michael R. Cranfield, and Esther R. Angert. "Fecal Bacterial Diversity in a Wild Gorilla." Applied and Environmental Microbiology 72, no. 5 (May 2006): 3788–92. http://dx.doi.org/10.1128/aem.72.5.3788-3792.2006.
Full textTsao, Kimberly, Stephen J. Bent, and Durland Fish. "Identification ofBorrelia burgdorferi ospCGenotypes in Host Tissue and Feeding Ticks by Terminal Restriction Fragment Length Polymorphisms." Applied and Environmental Microbiology 79, no. 3 (November 26, 2012): 958–64. http://dx.doi.org/10.1128/aem.03106-12.
Full textWang, Jia Jia, Yu Mei Li, Zhi Wen Zhao, Qiang Li, Ying Zi Liu, Chun Jiang Ye, Da Ke Hao, Yan Hong Qu, Qing Qing Zhang, and Jun Fa Li. "T-RFLP Analysis of Soil Microbial Community from Shandong Province for Forensic Science." Advanced Materials Research 599 (November 2012): 250–53. http://dx.doi.org/10.4028/www.scientific.net/amr.599.250.
Full textSavichtcheva, O., and S. Okabe. "Qualitative and quantitative estimation of host-specific fecal pollution using Bacteroides–Prevotella 16S rRNA genetic markers by T-RFLP and real-time PCR analyses." Water Science and Technology 59, no. 9 (May 1, 2009): 1831–40. http://dx.doi.org/10.2166/wst.2009.213.
Full textKasuga, I., D. Shimazaki, and S. Kunikane. "Influence of backwashing on the microbial community in a biofilm developed on biological activated carbon used in a drinking water treatment plant." Water Science and Technology 55, no. 8-9 (April 1, 2007): 173–80. http://dx.doi.org/10.2166/wst.2007.256.
Full textMengoni, Alessio, Eva Grassi, and Marco Bazzicalupo. "Cloning Method for Taxonomic Interpretation of T-RFLP Patterns." BioTechniques 33, no. 5 (November 2002): 990–92. http://dx.doi.org/10.2144/02335bm04.
Full textCoolen, Marco J. L., Eduard Post, Catherine C. Davis, and Larry J. Forney. "Characterization of Microbial Communities Found in the Human Vagina by Analysis of Terminal Restriction Fragment Length Polymorphisms of 16S rRNA Genes." Applied and Environmental Microbiology 71, no. 12 (December 2005): 8729–37. http://dx.doi.org/10.1128/aem.71.12.8729-8737.2005.
Full textZerba, K. E., A. M. Kessling, J. Davignon, and C. F. Sing. "Genetic structure and the search for genotype-phenotype relationships: an example from disequilibrium in the Apo B gene region." Genetics 129, no. 2 (October 1, 1991): 525–33. http://dx.doi.org/10.1093/genetics/129.2.525.
Full textFogarty, Lisa R., and Mary A. Voytek. "Comparison of Bacteroides-Prevotella 16S rRNA Genetic Markers for Fecal Samples from Different Animal Species." Applied and Environmental Microbiology 71, no. 10 (October 2005): 5999–6007. http://dx.doi.org/10.1128/aem.71.10.5999-6007.2005.
Full textVillanueva da Fonseca, Luisa Andrea, Maria Anilda Santos Araújo, Denise Maria Wanderlei Silva, and Fernanda Cristina De Albuquerque Maranhão. "ITS-RFLP optimization for dermatophyte identification from clinical sources in Alagoas (Brazil) versus phenotypic methods." Journal of Infection in Developing Countries 16, no. 11 (November 29, 2022): 1773–77. http://dx.doi.org/10.3855/jidc.17077.
Full textDinoto, Achmad, Akarat Suksomcheep, Satoshi Ishizuka, Hanae Kimura, Satoshi Hanada, Yoichi Kamagata, Kozo Asano, Fusao Tomita, and Atsushi Yokota. "Modulation of Rat Cecal Microbiota by Administration of Raffinose and Encapsulated Bifidobacterium breve." Applied and Environmental Microbiology 72, no. 1 (January 2006): 784–92. http://dx.doi.org/10.1128/aem.72.1.784-792.2006.
Full textCampbell, M. A., D. Chen, and P. C. Ronald. "Development of Co-Dominant Amplified Polymorphic Sequence Markers in Rice that Flank the Magnaporthe grisea Resistance Gene Pi7(t) in Recombinant Inbred Line 29." Phytopathology® 94, no. 3 (March 2004): 302–7. http://dx.doi.org/10.1094/phyto.2004.94.3.302.
Full textJärve, K., H. O. Peusha, J. Tsymbalova, S. Tamm, K. M. Devos, and T. M. Enno. "Chromosomal location of a Triticum timopheevii - derived powdery mildew resistance gene transferred to common wheat." Genome 43, no. 2 (March 15, 2000): 377–81. http://dx.doi.org/10.1139/g99-141.
Full textOndreičková, Katarína, Andrej Ficek, Daniel Mihálik, Marcela Gubišová, Martina Hudcovicová, Hana Drahovská, and Ján Kraic. "Bacterial Communities in Rhizosphere of Maize Studied by T-RFLP." Agriculture (Pol'nohospodárstvo) 60, no. 3 (December 10, 2014): 98–104. http://dx.doi.org/10.2478/agri-2014-0011.
Full textRüger, M., and U. Reichl. "Charakterisierung medizinisch relevanter bakterieller Mischkulturen mittels t-RFLP und Durchflusszytometrie." Chemie Ingenieur Technik 84, no. 8 (July 25, 2012): 1292. http://dx.doi.org/10.1002/cite.201250246.
Full textVaccino, P., M. Accerbi, and M. Corbellini. "Cultivar identification in T. aestivum using highly polymorphic RFLP probes." Theoretical and Applied Genetics 86, no. 7 (August 1993): 833–36. http://dx.doi.org/10.1007/bf00212609.
Full textGalal-Khallaf, Asmaa, Khaled Mohammed-Geba, Alaa G. M. Osman, Khaled Y. AbouelFadl, Yaisel J. Borrell, and Eva Garcia-Vazquez. "SNP-based PCR-RFLP, T-RFLP and FINS methodologies for the identification of commercial fish species in Egypt." Fisheries Research 185 (January 2017): 34–42. http://dx.doi.org/10.1016/j.fishres.2016.09.031.
Full textWaldron, L. S., B. C. Ferrari, M. R. Gillings, and M. L. Power. "Terminal Restriction Fragment Length Polymorphism for Identification of Cryptosporidium Species in Human Feces." Applied and Environmental Microbiology 75, no. 1 (October 31, 2008): 108–12. http://dx.doi.org/10.1128/aem.01341-08.
Full textDagar, Sumit S., Sanjay Kumar, Priti Mudgil, Rameshwar Singh, and Anil K. Puniya. "D1/D2 Domain of Large-Subunit Ribosomal DNA for Differentiation of Orpinomyces spp." Applied and Environmental Microbiology 77, no. 18 (July 22, 2011): 6722–25. http://dx.doi.org/10.1128/aem.05441-11.
Full textConn, Vanessa M., and Christopher M. M. Franco. "Analysis of the Endophytic Actinobacterial Population in the Roots of Wheat (Triticum aestivum L.) by Terminal Restriction Fragment Length Polymorphism and Sequencing of 16S rRNA Clones." Applied and Environmental Microbiology 70, no. 3 (March 2004): 1787–94. http://dx.doi.org/10.1128/aem.70.3.1787-1794.2004.
Full textKent, Angela D., Dan J. Smith, Barbara J. Benson, and Eric W. Triplett. "Web-Based Phylogenetic Assignment Tool for Analysis of Terminal Restriction Fragment Length Polymorphism Profiles of Microbial Communities." Applied and Environmental Microbiology 69, no. 11 (November 2003): 6768–76. http://dx.doi.org/10.1128/aem.69.11.6768-6776.2003.
Full textBae, H., Y. C. Chung, and J. Y. Jung. "Microbial community structure and occurrence of diverse autotrophic ammonium oxidizing microorganisms in the anammox process." Water Science and Technology 61, no. 11 (June 1, 2010): 2723–32. http://dx.doi.org/10.2166/wst.2010.075.
Full textHayes, Dawn C., Rebecca R. Anderson, and Richard L. Walker. "Identification of Trichomonadid Protozoa from the Bovine Preputial Cavity by Polymerase Chain Reaction and Restriction Fragment Length Polymorphism Typing." Journal of Veterinary Diagnostic Investigation 15, no. 4 (July 2003): 390–94. http://dx.doi.org/10.1177/104063870301500417.
Full textDopheide, Andrew, Gavin Lear, Rebecca Stott, and Gillian Lewis. "Relative Diversity and Community Structure of Ciliates in Stream Biofilms According to Molecular and Microscopy Methods." Applied and Environmental Microbiology 75, no. 16 (June 26, 2009): 5261–72. http://dx.doi.org/10.1128/aem.00412-09.
Full textMatsuda, M., D. Inoue, Y. Anami, H. Tsutsui, K. Sei, S. Soda, and M. Ike. "Comparative analysis of DNA-based microbial community composition and substrate utilisation patterns of activated sludge microorganisms from wastewater treatment plants operated under different conditions." Water Science and Technology 61, no. 11 (June 1, 2010): 2843–51. http://dx.doi.org/10.2166/wst.2010.212.
Full textThies, Frank L., Wolfgang König, and Brigitte König. "Rapid characterization of the normal and disturbed vaginal microbiota by application of 16S rRNA gene terminal RFLP fingerprinting." Journal of Medical Microbiology 56, no. 6 (June 1, 2007): 755–61. http://dx.doi.org/10.1099/jmm.0.46562-0.
Full textAnderson, J. A., and S. S. Maan. "Interspecific nuclear–cytoplasmic compatibility controlled by genes on group 1 chromosomes in durum wheat." Genome 38, no. 4 (August 1, 1995): 803–8. http://dx.doi.org/10.1139/g95-102.
Full textSegonds, Christine, Thierry Heulin, Nicole Marty, and Gerard Chabanon. "Differentiation of Burkholderia Species by PCR-Restriction Fragment Length Polymorphism Analysis of the 16S rRNA Gene and Application to Cystic Fibrosis Isolates." Journal of Clinical Microbiology 37, no. 7 (1999): 2201–8. http://dx.doi.org/10.1128/jcm.37.7.2201-2208.1999.
Full textPandey, J., S. S. Sood, and R. K. Jain. "Terminal restriction fragment length polymorphism (T-RFLP) analysis: Characterizing the unseen." Indian Journal of Microbiology 47, no. 1 (March 2007): 90–91. http://dx.doi.org/10.1007/s12088-007-0017-7.
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