Journal articles on the topic 'Soil DNA'
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Zanella, A. "Vegetation, soil, DNA and natural evolution." Forest@ - Rivista di Selvicoltura ed Ecologia Forestale 20, no. 1 (February 28, 2023): 10–12. http://dx.doi.org/10.3832/efor4285-019.
Full textMahmoudi, Nagissa, Greg F. Slater, and Roberta R. Fulthorpe. "Comparison of commercial DNA extraction kits for isolation and purification of bacterial and eukaryotic DNA from PAH-contaminated soils." Canadian Journal of Microbiology 57, no. 8 (August 2011): 623–28. http://dx.doi.org/10.1139/w11-049.
Full textRosa, Márcia Maria, Sâmia Maria Tauk-Tornisielo, and Sandra Regina Ceccato-Antonini. "EVALUATION OF DIFFERENT TECHNIQUES FOR DNA DIRECT EXTRACTION FROM BRAZILIAN AGRICULTURAL SOIL." Holos Environment 10, no. 1 (October 5, 2010): 12. http://dx.doi.org/10.14295/holos.v10i1.1842.
Full textSingh, Hina, KyungHwa Won, Hien T. T. Ngo, Juan Du, MooChang Kook, and Tae-Hoo Yi. "Phycicoccus soli sp. nov., isolated from soil." International Journal of Systematic and Evolutionary Microbiology 65, Pt_8 (August 1, 2015): 2351–56. http://dx.doi.org/10.1099/ijs.0.000265.
Full textHuang, Danqiong, Guiping Yan, Neil C. Gudmestad, and Jonathan Whitworth. "Assessment of Factors Associated with Molecular Quantification of Stubby Root Nematode Paratrichodorus allius from Field Soil DNA." Plant Disease 103, no. 12 (December 2019): 3265–73. http://dx.doi.org/10.1094/pdis-12-18-2240-re.
Full textkheyrodin, Hamid. "Soil DNA Purification and Isolation." Global Journal of Agricultural Innovation, Research & Development 2, no. 2 (July 21, 2016): 43–48. http://dx.doi.org/10.15377/2409-9813.2015.02.02.2.
Full textRobe, Patrick, Renaud Nalin, Carmela Capellano, Timothy M. Vogel, and Pascal Simonet. "Extraction of DNA from soil." European Journal of Soil Biology 39, no. 4 (October 2003): 183–90. http://dx.doi.org/10.1016/s1164-5563(03)00033-5.
Full textWoods, Angela, Maribeth Watwood, and Egbert Schwartz. "Identification of a Toluene-Degrading Bacterium from a Soil Sample through H218O DNA Stable Isotope Probing." Applied and Environmental Microbiology 77, no. 17 (July 8, 2011): 5995–99. http://dx.doi.org/10.1128/aem.05689-11.
Full textReavy, Brian, Maud M. Swanson, Peter J. A. Cock, Lorna Dawson, Thomas E. Freitag, Brajesh K. Singh, Lesley Torrance, Arcady R. Mushegian, and Michael Taliansky. "Distinct Circular Single-Stranded DNA Viruses Exist in Different Soil Types." Applied and Environmental Microbiology 81, no. 12 (April 3, 2015): 3934–45. http://dx.doi.org/10.1128/aem.03878-14.
Full textWnuk, Ewa, Adam Waśko, Anna Walkiewicz, Piotr Bartmiński, Romualda Bejger, Lilla Mielnik, and Andrzej Bieganowski. "The effects of humic substances on DNA isolation from soils." PeerJ 8 (July 24, 2020): e9378. http://dx.doi.org/10.7717/peerj.9378.
Full textTaylor-Cornejo, Elias. "Empowering Undergraduates to Fight Climate Change with Soil Microbes." DNA and Cell Biology 41, no. 1 (January 1, 2022): 58–63. http://dx.doi.org/10.1089/dna.2021.0551.
Full textSagova-Mareckova, Marketa, Ladislav Cermak, Jitka Novotna, Kamila Plhackova, Jana Forstova, and Jan Kopecky. "Innovative Methods for Soil DNA Purification Tested in Soils with Widely Differing Characteristics." Applied and Environmental Microbiology 74, no. 9 (March 14, 2008): 2902–7. http://dx.doi.org/10.1128/aem.02161-07.
Full textWu, Lin Hui, Jian Li Liu, Jing Zeng, and Ji Zhao. "Comparison of DNA Extraction and Purification Methods from Different Soils for Metagenomic Sequencing." Advanced Materials Research 955-959 (June 2014): 306–9. http://dx.doi.org/10.4028/www.scientific.net/amr.955-959.306.
Full textDimitrov, Mauricio R., Annelies J. Veraart, Mattias de Hollander, Hauke Smidt, Johannes A. van Veen, and Eiko E. Kuramae. "Successive DNA extractions improve characterization of soil microbial communities." PeerJ 5 (February 1, 2017): e2915. http://dx.doi.org/10.7717/peerj.2915.
Full textMoon, Ji-Young, Soo-Jin Kim, Moriyuki Hamada, Jae-Hyung Ahn, Hang-Yeon Weon, Ken-ichiro Suzuki, Jung-Hoon Yoon, and Soon-Wo Kwon. "Gryllotalpicola soli sp. nov., isolated from soil." International Journal of Systematic and Evolutionary Microbiology 64, Pt_12 (December 1, 2014): 4079–83. http://dx.doi.org/10.1099/ijs.0.067710-0.
Full textSchloss, Patrick D., Heather K. Allen, Amy K. Klimowicz, Christine Mlot, Jessica A. Gross, Sarah Savengsuksa, Jennifer McEllin, Jon Clardy, Roger W. Ruess, and Jo Handelsman. "Psychrotrophic Strain ofJanthinobacterium lividumfrom a Cold Alaskan Soil Produces Prodigiosin." DNA and Cell Biology 29, no. 9 (September 2010): 533–41. http://dx.doi.org/10.1089/dna.2010.1020.
Full textFrostegård, Åsa, Sophie Courtois, Vincent Ramisse, Sylvie Clerc, Dominique Bernillon, Francoise Le Gall, Pascale Jeannin, Xavier Nesme, and Pascal Simonet. "Quantification of Bias Related to the Extraction of DNA Directly from Soils." Applied and Environmental Microbiology 65, no. 12 (December 1, 1999): 5409–20. http://dx.doi.org/10.1128/aem.65.12.5409-5420.1999.
Full textSrinivasiah, Sharath, Jacqueline Lovett, Shawn Polson, Jaysheel Bhavsar, Dhritiman Ghosh, Krishnakali Roy, Jeffry J. Fuhrmann, Mark Radosevich, and K. Eric Wommack. "Direct Assessment of Viral Diversity in Soils by Random PCR Amplification of Polymorphic DNA." Applied and Environmental Microbiology 79, no. 18 (June 21, 2013): 5450–57. http://dx.doi.org/10.1128/aem.00268-13.
Full textOmer, Zahra Saad, Ann-Charlotte Wallenhammar, and Maria Viketoft. "Development of Loop-Mediated Isothermal Amplification Assay for Rapid Detection and Analysis of the Root-Knot Nematode Meloidogyne hapla in Soil." Horticulturae 8, no. 2 (January 19, 2022): 87. http://dx.doi.org/10.3390/horticulturae8020087.
Full textYoon, Jung-Hoon, So-Jung Kang, Hwe-Su Yi, Tae-Kwang Oh, and Choong-Min Ryu. "Rhizobium soli sp. nov., isolated from soil." International Journal of Systematic and Evolutionary Microbiology 60, no. 6 (June 1, 2010): 1387–93. http://dx.doi.org/10.1099/ijs.0.013094-0.
Full textChoi, Jung-Hye, Min-Soo Kim, Seong Woon Roh, and Jin-Woo Bae. "Acidovorax soli sp. nov., isolated from landfill soil." International Journal of Systematic and Evolutionary Microbiology 60, no. 12 (December 1, 2010): 2715–18. http://dx.doi.org/10.1099/ijs.0.019661-0.
Full textPhilippot, Laurent, Cristina Abbate, Antonio Bispo, Thierry Chesnot, Sara Hallin, Philippe Lemanceau, Kristina Lindström, et al. "Soil microbial diversity: an ISO standard for soil DNA extraction." Journal of Soils and Sediments 10, no. 7 (July 6, 2010): 1344–45. http://dx.doi.org/10.1007/s11368-010-0265-8.
Full textLiles, Mark R., Lynn L. Williamson, Jitsupang Rodbumrer, Vigdis Torsvik, Robert M. Goodman, and Jo Handelsman. "Recovery, Purification, and Cloning of High-Molecular-Weight DNA from Soil Microorganisms." Applied and Environmental Microbiology 74, no. 10 (March 21, 2008): 3302–5. http://dx.doi.org/10.1128/aem.02630-07.
Full textWolinska, Agnieszka, Zofia Stępniewska, and Anna Pytlak. "The effect of environmental factors on total soil DNA content and dehydrogenase activity." Archives of Biological Sciences 67, no. 2 (2015): 493–501. http://dx.doi.org/10.2298/abs140120013w.
Full textZwolinski, Michele D. "DNA Sequencing: Strategies for Soil Microbiology." Soil Science Society of America Journal 71, no. 2 (March 2007): 592–600. http://dx.doi.org/10.2136/sssaj2006.0125.
Full textBIENERT, FRIEDERIKE, SÉBASTIEN DE DANIELI, CHRISTIAN MIQUEL, ERIC COISSAC, CAROLE POILLOT, JEAN-JACQUES BRUN, and PIERRE TABERLET. "Tracking earthworm communities from soil DNA." Molecular Ecology 21, no. 8 (January 17, 2012): 2017–30. http://dx.doi.org/10.1111/j.1365-294x.2011.05407.x.
Full textRougerie, Rodolphe, Thibaud Decaëns, Louis Deharveng, David Porco, Sam W. James, Chih-Han Chang, Benoit Richard, Mikhail Potapov, Yayuk Suhardjono, and Paul D. N. Hebert. "DNA barcodes for soil animal taxonomy." Pesquisa Agropecuária Brasileira 44, no. 8 (August 2009): 789–802. http://dx.doi.org/10.1590/s0100-204x2009000800002.
Full textBrierley, Jennie L., Jennifer A. Stewart, and Alison K. Lees. "Quantifying potato pathogen DNA in soil." Applied Soil Ecology 41, no. 2 (February 2009): 234–38. http://dx.doi.org/10.1016/j.apsoil.2008.11.004.
Full textLuo, Xiaonan, Jianli Zhang, Dai Li, Yuhua Xin, Di Xin, and Lei Fan. "Planomicrobium soli sp. nov., isolated from soil." International Journal of Systematic and Evolutionary Microbiology 64, Pt_8 (August 1, 2014): 2700–2705. http://dx.doi.org/10.1099/ijs.0.055426-0.
Full textKuske, Cheryl R., Kaysie L. Banton, Dante L. Adorada, Peter C. Stark, Karen K. Hill, and Paul J. Jackson. "Small-Scale DNA Sample Preparation Method for Field PCR Detection of Microbial Cells and Spores in Soil." Applied and Environmental Microbiology 64, no. 7 (July 1, 1998): 2463–72. http://dx.doi.org/10.1128/aem.64.7.2463-2472.1998.
Full textKim, Byung-Yong, Hang-Yeon Weon, Seung-Hee Yoo, Seon-Young Lee, Soon-Wo Kwon, Seung-Joo Go, and Erko Stackebrandt. "Variovorax soli sp. nov., isolated from greenhouse soil." International Journal of Systematic and Evolutionary Microbiology 56, no. 12 (December 1, 2006): 2899–901. http://dx.doi.org/10.1099/ijs.0.64390-0.
Full textPark, Min-Ju, Ho-Bin Kim, Dong-Shan An, Hee-Chan Yang, Seok-Tae Oh, Hae-Jung Chung, and Deok-Chun Yang. "Paenibacillus soli sp. nov., a xylanolytic bacterium isolated from soil." International Journal of Systematic and Evolutionary Microbiology 57, no. 1 (January 1, 2007): 146–50. http://dx.doi.org/10.1099/ijs.0.64533-0.
Full textChoi, Jung-Hye, Min-Soo Kim, Mi-Ja Jung, Seong Woon Roh, Kee-Sun Shin, and Jin-Woo Bae. "Sphingopyxis soli sp. nov., isolated from landfill soil." International Journal of Systematic and Evolutionary Microbiology 60, no. 7 (July 1, 2010): 1682–86. http://dx.doi.org/10.1099/ijs.0.013128-0.
Full textWang, Xiang, Hong-Xing Yang, Ying-Kun Zhang, Shi-Jun Zhu, Xiao-Wei Liu, Hao Zhang, Chen-Fei Zhang, Chao-Ran Zhao, Gang Hu, and Qing Hong. "Luteimonas soli sp. nov., isolated from farmland soil." International Journal of Systematic and Evolutionary Microbiology 65, Pt_12 (December 1, 2015): 4809–15. http://dx.doi.org/10.1099/ijsem.0.000652.
Full textYoung, Monica R., and Paul D. N. Hebert. "Unearthing soil arthropod diversity through DNA metabarcoding." PeerJ 10 (February 1, 2022): e12845. http://dx.doi.org/10.7717/peerj.12845.
Full textJiang, Wan-Kui, Qin-Qin Gao, Lu Zhang, Gao-Jie Sun, Ming-Liang Zhang, Xiao-An Liu, Hui Wang, Yi-Dong Zhou, Zhi-Jian Ke, and Qing Hong. "Ornithinicoccus soli sp. nov., isolated from farmland soil." International Journal of Systematic and Evolutionary Microbiology 70, no. 3 (March 1, 2020): 1793–99. http://dx.doi.org/10.1099/ijsem.0.003972.
Full textJohnsen, Anders R., Anne Winding, Ulrich Karlson, and Peter Roslev. "Linking of Microorganisms to Phenanthrene Metabolism in Soil by Analysis of 13C-Labeled Cell Lipids." Applied and Environmental Microbiology 68, no. 12 (December 2002): 6106–13. http://dx.doi.org/10.1128/aem.68.12.6106-6113.2002.
Full textLee, Myungjin, Sung-Geun Woo, Myoungsoo Chae, and Leonid N. Ten. "Pusillimonas soli sp. nov., isolated from farm soil." International Journal of Systematic and Evolutionary Microbiology 60, no. 10 (October 1, 2010): 2326–30. http://dx.doi.org/10.1099/ijs.0.020404-0.
Full textAliche, Ernest B., Warner Talsma, Teun Munnik, and Harro J. Bouwmeester. "Characterization of maize root microbiome in two different soils by minimizing plant DNA contamination in metabarcoding analysis." Biology and Fertility of Soils 57, no. 5 (April 9, 2021): 731–37. http://dx.doi.org/10.1007/s00374-021-01555-3.
Full textHirano, Takeshi, and Kazuyoshi Tamae. "Heavy Metal-Induced Oxidative DNA Damage in Earthworms: A Review." Applied and Environmental Soil Science 2010 (2010): 1–7. http://dx.doi.org/10.1155/2010/726946.
Full textJauhani, Muhammad Afiful, and Sheilla Rachmania. "DNA Quality and Quantity on Blood Spot Post Soil and Ultraviolet-C Exposure." Journal of Agromedicine and Medical Sciences 6, no. 3 (October 12, 2020): 181. http://dx.doi.org/10.19184/ams.v6i3.19937.
Full textLee, Myungjin, Leonid N. Ten, Sung-Geun Woo, and Joonhong Park. "Agromyces soli sp. nov., isolated from farm soil." International Journal of Systematic and Evolutionary Microbiology 61, no. 6 (June 1, 2011): 1286–92. http://dx.doi.org/10.1099/ijs.0.021568-0.
Full textBoggs, Laura M., Melissa K. R. Scheible, Gustavo Machado, and Kelly A. Meiklejohn. "Single Fragment or Bulk Soil DNA Metabarcoding: Which is Better for Characterizing Biological Taxa Found in Surface Soils for Sample Separation?" Genes 10, no. 6 (June 6, 2019): 431. http://dx.doi.org/10.3390/genes10060431.
Full textTorsvik, V., J. Goksøyr, and F. L. Daae. "High diversity in DNA of soil bacteria." Applied and Environmental Microbiology 56, no. 3 (1990): 782–87. http://dx.doi.org/10.1128/aem.56.3.782-787.1990.
Full textBonadei, Martina, Alma Balestrazzi, Barbara Frigerio, and Daniela Carbonera. "Soil persistence of DNA from transgenic poplar." Environmental Biosafety Research 8, no. 2 (April 2009): 79–86. http://dx.doi.org/10.1051/ebr/2009005.
Full textPettit, Robin K. "Soil DNA libraries for anticancer drug discovery." Cancer Chemotherapy and Pharmacology 54, no. 1 (April 8, 2004): 1–6. http://dx.doi.org/10.1007/s00280-004-0771-8.
Full textLartey, R. T., T. C. Caesar-TonThat, A. W. Lenssen, J. Eckhoff, S. L. Hanson, and R. G. Evans. "Direct Polymerase Chain Reaction-Based Detection of Cercospora beticola in Field Soils." Plant Disease 94, no. 9 (September 2010): 1100–1104. http://dx.doi.org/10.1094/pdis-94-9-1100.
Full textYoo, Seung-Hee, Hang-Yeon Weon, Byung-Yong Kim, Seung-Beom Hong, Soon-Wo Kwon, Yang-Hee Cho, Seung-Joo Go, and Erko Stackebrandt. "Devosia soli sp. nov., isolated from greenhouse soil in Korea." International Journal of Systematic and Evolutionary Microbiology 56, no. 11 (November 1, 2006): 2689–92. http://dx.doi.org/10.1099/ijs.0.64214-0.
Full textGorny, Adrienne M., Frank S. Hay, Xiaohong Wang, and Sarah J. Pethybridge. "Isolation of nematode DNA from 100 g of soil using Fe3O4 super paramagnetic nanoparticles." Nematology 20, no. 3 (2018): 271–83. http://dx.doi.org/10.1163/15685411-00003140.
Full textBaidoo, Richard, Guiping Yan, Berlin Nelson, Andrea M. Skantar, and Senyu Chen. "Use of Chemical Flocculation and Nested PCR for Heterodera glycines Detection in DNA Extracts from Field Soils with Low Population Densities." Plant Disease 101, no. 7 (July 2017): 1153–61. http://dx.doi.org/10.1094/pdis-08-16-1163-re.
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