Dissertations / Theses on the topic 'Ruthenium. Complex compounds. Azides'

Transition metal catalyzed selective nitrene insertion into C-H bonds, which allows direct incorporation of nitrogen functionality into hydrocarbons, represents an appealing methodology for C-N bond formation, a type of bond formation of great importance in organic synthesis due to the prevalence of amino groups in biologically active natural products and pharmaceuticals. Organic azides are atom-economic and an environment-benign nitrene source. This dissertation reports the use of organic azides as a nitrene source to develop a series of protocols for C-H bond functionalization by metal-catalyzed nitrene insertion, including the diimination of indoles, the phosphoramidation of aldehydes and the amination of hydrocarbons catalyzed by ruthenium porphyrins. Carbonylruthenium(II) porphyrin complex Ru(TTP)(CO) (TTP = meso-tetrakis(p-tolyl)porphyrinato dianion) is an effective catalyst for nitrene transfer to sp2 C-H bonds of indoles using aryl azides (ArN3) as a nitrene source. This “Ru(TTP)(CO) + ArN3” protocol selectively results in the diimination of indoles without the corresponding monoimination products being detected. In the presence of a catalyst Ru(TTP)(CO), the reactions of N-methylindole with ArN3 (Ar = 4-nitrophenyl; 3,5-bis(trifluoromethyl)phenyl), and reactions of a variety of N-substituted indoles with 4-nitrophenylazide, afford 2,3-diiminoindoles in good to excellent yields (up to 90%). This unique type of 2,3-diimination products was characterized by NMR spectroscopy, mass spectrometry and single crystal X-ray crystallography. The catalytic diimination product from N-methylindole and ArN3 (Ar = 3,5-bis(trifluoromethyl)phenyl) can also be obtained through stoichiometric reaction of N-methylindole with the corresponding bis(arylimido)ruthenium(VI) porphyrin, suggesting the possible involvement of RuVI(TTP)(NAr)2 intermediates in the Ru(TTP)(CO)-catalyzed diimination reactions. Dichlororuthenium(IV) porphyrin complex Ru(TTP)Cl2 efficiently catalyzes the phosphoramidation of aldehydes with phosphoryl azides (RO)2P(O)N3 via a nitrene insertion into sp2 C-H bonds of aldehydes. This represents the first study on the catalytic activity of a ruthenium(IV) porphyrin towards nitrene insertion into C-H bonds. The “Ru(TTP)Cl2 + (RO)2P(O)N3” protocol exhibits high chemoselectivity and functional group tolerability. Good to excellent product yields (up to 99%) have been obtained for the Ru(TTP)Cl2-catalyzed phosphoramidation of a wide variety of aldehydes with commercially available (PhO)2P(O)N3 (DPPA) and phosphoramidation of p-tolualdehyde with various (RO)2P(O)N3 (R = Me, Et, CCl3CH2, 4-nitrophenyl). The reaction can be scaled up by adding phosphoryl azide dropwise. The use of commercially available DPPA in this protocol offers a convenient and practical method for the synthesis of N-acylphosphoramidates. “Ru(TDCPP)Cl2 + (CCl3CH2O)2P(O)N3” (TDCPP = meso-tetrakis(2,6-dichlorophenyl)porphyrinato dianion) serves as an effective protocol for intermolecular nitrene insertion into sp3 C-H bonds of hydrocarbons. Using this protocol, a variety of hydrocarbons including cycloalkanes (such as cyclohexane) and ethylbenzenes undergo sp3 C-H amination in moderate to high yields (up to 86%). Compared with ruthenium(II) porphyrins such as Ru(TDCPP)(CO) and dirhodium carboxylates such as Rh2(OAc)4, Ru(TDCPP)Cl2 displays a markedly higher catalytic activity towards the nitrene sp3 C-H insertion with (CCl3CH2O)2P(O)N3. In addition, intramolecular nitrene insertion into sp3 C-H bond can also take place in good yields with Ru(TDCPP)Cl2 as the catalyst.
published_or_final_version
Chemistry
Doctoral
Doctor of Philosophy

A series of low band-gap conjugated polymers with intramolecular charge transfer properties were synthesized and bulk heterojunction devices based on these polymers were fabricated. The electrochemical and photophysical properties of the polymers were tuned by using different electron withdrawing molecules or ruthenium complexes as the comonomer. Preliminary results suggested that the electronic structures of the polymer were significantly altered by the incorporation of different acceptor units. The polymers also demonstrated intense absorption bands in the visible region, indicating that they are suitable photoactive materials in bulk heterojunction devices. The synthesis and characterization of a series of organic donor-acceptor copolymers were studied. All of the polymers contained alternating cyclopenta[2,1- b:3,4-b’]dithiophene (CPDT) units. The effects of the different acceptor monomers were evaluated. The electron-withdrawing carboxylate and amide functional groups of the acceptors were found to effectively stabilize the HOMO levels of the polymer, and the optical band-gaps were significantly reduced. Bulk heterojunction devices were fabricated using the polymers and 6,6-phenyl C61 butyric acid methyl ester (PCBM) as donors and acceptors respectively. These devices exhibited high open circuit voltage (Voc) up to 0.86 V. The extended photosensitizing range was confirmed by the external quantum efficiency (EQE) spectra. The device performance was further improved by optimizing the active layer thickness and applying 1,8-diiodooctane in the blend solution. A new synthetic route to novel ruthenium containing polymers was also reported. [Ru(L)(L’)Cl2] complexes (L and L’ = bidentate N^N ligands) with a dibromo-substituted ligand were found to be polymerizable by Stille cross-coupling reaction. The subsequent displacement of the chloride ligands by thiocyanate was highly effective and the structures of the target polymers were fully characterized. The main chain absorption showed a significant red-shift upon metal coordination and the metal-to-ligand charge transfer (MLCT) of the complex strengthens the photon harvesting ability of the polymer. The dual function of these Ru(II) complexes demonstrated a new avenue to develop new classes of optoelectronic materials. The extent of _-delocalization of the ancillary ligands also showed interesting effects on the electronic properties of the polymers. Bulk heterojunction devices were fabricated. Photovoltaic response was observed in these devices, and the device performance can be improved by further modifying the surface morphology of the blend films.
published_or_final_version
Chemistry
Master
Master of Philosophy

The homogeneous hydrogenation of esters and related compounds has been achieved by a catalyst-generated in-situ from the precursors Ru(acac)(_3) and the tripodal phosphine ligand l,l,l-tris(diphenylphosphinomethyl)ethane (Triphos). The catalyst is susceptible to deactivation in the presence of primary alcohols by their dehydrogenation to an aldehyde, which is subsequently decarbonylated to produce the [Ru(Triphos)H(_2)(CO)] complex, characterised by (^1)H and (^31)P NMR spectroscopy, elemental analysis, IR and X- ray crystallography. The co-ordinated carbonyl ligand of [Ru(Triphos)H(_2)(CO)] effectively blocks the co-ordination site required by the substrate for further hydrogenation, thus deactivating the catalyst. Reactivation of the deactivated catalyst can be achieved, by introducing water to the reaction mixture, and removing the carbonyl ligand through the water gas shift reaction. The inclusion of water within the reaction solvent results in catalyst reactivation during the hydrogenation process. Investigation of the hydrogenation of alkenes, in the absence of reagents susceptible to decarbonylation, resulted in the isolation of the solid dinuclear complex [(Triphos)RuH(μ-H)(_2)HRu(Triphos)], which was characterised by X-ray crystallography and (^31)P NMR spectroscopy. Its information suggests that the active catalyst is [Ru(Triphos)H(_2)].The separation of the products from the catalyst and unconsumed reactants has been achieved by distillation of the product solution of the hydrogenation reaction. The recovered catalyst is sufficiently robust to be capable of multiple recycles, replicating the original and repeated result without loss of activity or selectivity.

This work has focussed on the preparation of a variety of tridentate ligands, designed to form ruthenium complexes as potential metathesis catalysts. Various approaches to the tridentate, malonate-tethered imidazolidine system have been investigated, and a promising route to accessing ligands of this type is discussed. A tridentate malonate-tethered pyridine ligand has been successfully prepared and its dithallium salt has been accessed by hydrolysis with thallium carbonate; approaches to a longer-chain analogue have also been investigated. A thallium pyridine-2,6- dicarboxylate ligand has been has been successfully prepared, as have a range of pyridine diamine ligands, with various alkyl and aromatic substituents on the amine donor atoms. Preliminary investigations into the potential of these compounds as ligands for alkylidene ruthenium complexes are reported using molecular modelling techniques. The geometries and steric energies of the ligands and their corresponding complexes have been analysed, and results obtained from two different software packages are compared. Finally, some preliminary complexation studies have been undertaken.

Thesis (MSc)--University of Stellenbosch, 2003.
ENGLISH ABSTRACT: Ruthenium, as one of the platinum group metals, was investigated to determine the aquation rate constant of [RuCl6]3- and the anation rate constant of [RuCl5(H2O)]2-. This two reactions represent the equilibrium reaction [RuCl6]3- + H2O ⇄ [RuCl5(H2O)]2- + Cl-. The reactions were followed, using stopped-flow injection and UV/Visible spectroscopy, at different temperatures. The aquation and anation rate constants were determined with good precision and thermodynamic values for the reactions were calculated. The pseudo first order aquation rate constant, k65, was determined by calculation from the regression line as k65 = 52.1 (±3.7) x10-3 s-1 at 25°C. The activation energy, Ea, is 90.1 (±1.2) kJ.mol-1 and the enthalpy and entropy of activation is 87.7 (±1.2) kJ.mol-1 and 24.7 (±4.3) J.K-1.mol-1, respectively. The aquation rate constant was found to be dependent on the hydrochloric acid concentration, decreasing with increasing hydrochloric acid concentration. From the regression line at 25°C the second order anation rate constant, k56, was calculated as 1.62 (±0.11) x10-3 M-1s-1. The activation energy is 88.0 (±1.4) kJ.mol-1, with the enthalpy and entropy of activation 85.6 (±1.4) kJ.mol-1 and –11.2 (±4.7) J.K-1.mol-1, respectively. The influence of the hydrochloric acid concentration of the solution on the anation rate constant was not investigated. The equilibrium constant for the reaction studied was calculated from the rate constants for the aquation and anation reactions. The equilibrium constant, K6, was calculated as 0.0311 M-1 at 25°C. The equilibrium constant, when compared to literature, was found to be dependent on the hydrochloric acid concentration. It was then used, in conjunction with data from the literature, to construct two distribution diagrams. Distribution diagrams for the Ru(III) aquachloro species show between 79.9% to 72.3% [RuCl6]3- present in 12M HCl. The two distribution diagrams were very similar and it is not possible to resolve the issue of a final distribution diagram for the aqua-chloro Ru(III) system without further investigation into the all the other rate constants of the Ru(III) aqua-chloro species. The rate constants and thermodynamic values for the Ru(III) reaction were compared to corresponding data (from literature) for Rh(III) and Ir(III) because several comparisons between these platinum group metals have been noted. It was found that for both the aquation and anation rate constants, the following trend was observed: Ru(III) > Rh(III) > Ir(III). These differences are in certain cases exploited in the refining of these platinum group metals. Crystals of diethylenetriamine hexachlororuthenate(III) was prepared and characterised by x-ray crystallography and CHN analysis. The average Cl-Ru bond length for the crystal was 2.371 Å. The crystal structure was compared to hexaaquaaluminium hexachlororuthenate(III) tetrahydrate and diethylenetriamine hexachlororhodate(III). The metal-chloride bond lengths of all the crystals were found to be similar (2.350 Å – 2.375 Å). The diethylenetriamine crystal structures compared well. The conclusion was that the crystals prepared were diethylenetriamine hexachlororuthenate(III).
AFRIKAANSE OPSOMMING: Ruthenium(III), een van die platinum groep metaal-ione, is in hierdie studie ondersoek om die akwasie tempo konstante van [RuCl6]3- en die anasie tempo konstante van [RuCl5(H2O)]2- te bepaal. Dié twee reaksies verteenwoordig die ewewigsreaksie [RuCl6]3- + H2O ⇄ [RuCl5(H2O)]2- + Cl-. Die verloop van die reaksies is met behulp van UV/Sigbare spektroskopie by verskillende temperature gevolg. Die akwasie en anasie tempo konstantes is bepaal met goeie presisie en die termodinamiese konstantes van die reaksies is bereken. Die pseudo-eerste orde akwasie tempo konstante, k65, is bepaal deur middel van regressie, as 52.1 (±3.7) x10-3 s-1 by 25°C. Die aktiverings energie, Ea, is bereken as 90.1 (±1.2) kJ.mol-1 en die entalpie en entropie van aktivering is onderskeidelik 87.7 (±1.2) kJ.mol-1 en 24.7 (±4.3) J.K-1.mol-1. Daar is gevind dat die akwasie reaksie konstante afhanklik was van die soutsuur konsentrasie: dit neem af soos die soutsuur konsentrasie toeneem. Met behulp van die regressie lyn is die anasie tempo konstante bepaal by 25°C as 1.62 (±0.11) x10-3 M-1s-1. Die aktiveringsenergie is bepaal as 88.0 (±1.4) kJ.mol-1 en die entalpie en entropie van aktivering, onderskeidelik as 85.6 (±1.4) kJ.mol-1 en –11.2 (±4.7) J.K-1.mol-1. Die invloed van die soutsuur konsentrasie op die anasie tempo konstante is nie bepaal nie. Die ewewigskonstante vir die reaksie wat ondersoek is, is bereken met die tempo konstantes vir die akwasie en anasie reaksies. Die ewewigskonstante, K6, is bereken as 0.0311 M-1 by 25°C. Toe die ewewigskonstante vergelyk is met die literatuur waardes, is gevind dat die ewewigskonstante afhanklik is van die soutsuur konsentrasie. Saam met die waardes wat in die literatuur gevind is, is die ewewigskonstante gebruik om twee distribusie diagramme te bereken. Die distribusie diagramme vir die Ru(III) spesies toon onderskeidelik 79.9% en 72.3% [RuCl6]3- in 12M HCl. Die twee distribusie diagramme is baie eenders en dit is nie moontlik om ‘n finale distribusie diagram op te trek totdat die uitstaande tempo konstantes tussen die akwachloro Ru(III) spesies bepaal word nie. Die tempo konstantes en termodinamiese waardes wat bepaal is vir die Ru(III) reaksie is vergelyk met gelyksoortige waardes in die literatuur van Rh(III) en Ir(III) omdat daar ooreenkomste tussen die platinum groep metale opgemerk is. Daar is bevind dat die akwasie én anasie reaksies die volgende patroon volg: Ru(III) > Rh(III) > Ir(III). Die verskille word in sekere gevalle benut in die raffinering van hierdie metale. Kristalle van dietileentriamien heksachlororuthenaat(III) is berei en gekarakteriseer met behulp van CHN analise en x-straal kristallografie. Die gemiddelde Cl-Ru bindingsafstand vir die kristal was 2.371 Å. Die kristalstruktuur is vergelyk met dié van heksaäkwaäluminium hexachlororuthenaat(III) tetrahidraat en diëtileentriamien heksachlororhodaat(III). Die chloried-metaal bindingsafstand vir die kristalle was soortgelyk (2.350 Å – 2.375 Å). Die diëtileentriamien kristalstrukture stem goed ooreen. Die gevolgtrekking was dat die kristalle wat voorberei is wel diëtileentriamien heksachlororuthenaat(III) was.

L’objectif de cette thèse est de préparer et caractériser de nouveaux agents théranostiques potentiels à base de complexes de ruthénium portant des molécules biologiquement actives. Pour évaluer potentiel théranostique des nouveaux composés les propriétés de luminescence et la cytotoxicité ont été considérées. Quatre nouveaux ligands portant des substituants a activité biologique: 5-(4-4’-methyl-[2,2’-bipyridine]-4-ylbut-1-yn-1-yl)pyridine-2-carbaldehyde semicarbazone (L1), 3-(5-4’-methyl-[2,2’-bipyridine]-4-ylpentyl)imidazolidine-2,4-dione (L2), 5,5-dimethyl-3-(5-4’-methyl-[2,2’-bipyridine]-4-ylpentyl)imidazolidine-2,4-dione (L3) and [1-(5-4’-methyl-[2,2’-bipyridine]-4-ylpentyl)-2,5-dioxoimidazolidin-4-yl]urea (L4) ont été prepares, caractérisés et engagés dans la synthese des complexes de ruthénium correspondants. Six complexes ont été obtenus a partir du ligand L1 ([Ru(bpy)2(L1)]2+, [Ru(Mebpy)2(L1)]2+, [Ru(tBubpy)2(L1)]2+, [Ru(Phbpy)2(L1)]2+, [Ru(dip)2(L1)]2+, [Ru(SO3dip)2(L1)]2-) et trios a partir de L2, L3 and L4 ([Ru(bpy)2(L2)]2+, [Ru(bpy)2(L3)]2+, [Ru(bpy)2(L4)]2+) (bpy = 2,2’-bipyridine, Mebpy = 4,4’-dimethyl-2,2-bipyridine, tBubpy = 4,4’-tert-butyl-2,2’-bipyridine, Phbpy = 4,4’-diphenyl-2,2-bipyridine, dip = 4,7-diphenyl-1,10-phenantroline and SO3dip = 4,7-di-(4-sulfonatophenyl)-1,10-phenantroline). Les propriétés spectroscopiques et photophysiques des composés ont été étudiées. La présence des ligands L1-L4 conduit a une décroissance du rendement quantique et de la durée de vie de l’état excité en comparaison des complexes non substitués [Ru(bpy)3]2+. Des calculs DFT montrent que les ligands L1-L4 n’influencent pas la géométrie du complexe mais accroissent le niveau énergétique de la HOMO induisant des band gap HOMO-LUMO plus faibles. Les interactions entre les complexes et l’human serum albumin (HSA) ont été étudiées. Tous les complexes préparaés montrent une tres forte affinité pour HSA – La constante d’association 105 M-1s-1 témoigne de la formation d’adduits Ru-HSA stables. Il a aussi été démontré que les complexes de ruthénium se lient préférentiellement a la poche hydrophobe des protéine, située dans le site 1 de Sudlow dans le sous domaine II A. Des études préliminaires ont montré que les complexes de ruthénium préparés presentent une activité cytotoxique vis-à-vis de diverses lignées de cellules cancéreuses. Cette activité associée aux bonnes propriétés de luminescence (rendement quantique, durée de vie) fait des nouveaux complexes des candidats potentiels pour les applications théranostiques
The main goal of this thesis was synthesis and preliminary characterization of novel ruthenium(II) polypyridyl complexes bearing biologically active molecules as potential theranostic agents. Luminescence for the diagnostic applications, and cytotoxicity for the anticancer, therapeutic applications are considered as the theranostic properties. Four new ligands containing biologically active moieties - 5-(4-4’-methyl-[2,2’-bipyridine]-4-ylbut-1-yn-1-yl)pyridine-2-carbaldehyde semicarbazone (L1), 3-(5-4’-methyl-[2,2’-bipyridine]-4-ylpentyl)imidazolidine-2,4-dione (L2), 5,5-dimethyl-3-(5-4’-methyl-[2,2’-bipyridine]-4-ylpentyl)imidazolidine-2,4-dione (L3) and [1-(5-4’-methyl-[2,2’-bipyridine]-4-ylpentyl)-2,5-dioxoimidazolidin-4-yl]urea (L4) were synthesized and characterized. The ligands were used to obtain nine novel ruthenium(II) polypyridyl complexes. Six complexes were synthesized with ligand L1 ([Ru(bpy)2(L1)]2+, [Ru(Mebpy)2(L1)]2+, [Ru(tBubpy)2(L1)]2+, [Ru(Phbpy)2(L1)]2+, [Ru(dip)2(L1)]2+, [Ru(SO3dip)2(L1)]2-) and three with ligands L2, L3 and L4 ([Ru(bpy)2(L2)]2+, [Ru(bpy)2(L3)]2+, [Ru(bpy)2(L4)]2+) (bpy = 2,2’-bipyridine, Mebpy = 4,4’-dimethyl-2,2-bipyridine, tBubpy = 4,4’-tert-butyl-2,2’-bipyridine, Phbpy = 4,4’-diphenyl-2,2-bipyridine, dip = 4,7-diphenyl-1,10-phenantroline and SO3dip = 4,7-di-(4-sulfonatophenyl)-1,10-phenantroline). The spectroscopic and photophysical properties of those complexes were determined. The presence of ligands L1-L4 in the structure of the complex decreased luminescence quantum yield and luminescence lifetime in comparison with unmodified [Ru(bpy)3]2+ complex. The theoretical calculations have shown that ligands L1-L4 do not have influence on ruthenium core geometry. However, they increased the energy of the HOMO that resulted in a shorter band gap. The simulated electronic absorption spectra were in a good agreement with the experimental data. The interactions between the studied ruthenium complexes and human serum albumin (HSA) were investigated. All studied Ru(II) complexes exhibited strong affinity to HSA with the association constant 105 M-1s-1, which suggests formation of Ru complex-HSA adducts. It was also determined that ruthenium complexes most likely bind to the hydrophobic pocket of protein, located in Sudlow’s site I in the subdomain II A. Preliminary cytotoxicity evaluation for the studied ruthenium complexes showed their cytotoxic activity towards cancer cell lines. Those results, together with good luminescence properties of the studied ruthenium complexes (luminescence lifetimes and luminescence quantum yield) make them interesting candidates for potential theranostic applications

Submitted by Ana Maria Fiscina Sampaio (fiscina@bahia.fiocruz.br) on 2015-04-10T17:04:35Z No. of bitstreams: 1 Rafael AraujoGomes Junior Efeitos....pdf: 34966477 bytes, checksum: 15df6dc2a7def6eca56bbb84930c6ae3 (MD5)
Approved for entry into archive by Ana Maria Fiscina Sampaio (fiscina@bahia.fiocruz.br) on 2015-04-10T17:04:46Z (GMT) No. of bitstreams: 1 Rafael AraujoGomes Junior Efeitos....pdf: 34966477 bytes, checksum: 15df6dc2a7def6eca56bbb84930c6ae3 (MD5)
Made available in DSpace on 2015-04-10T17:04:46Z (GMT). No. of bitstreams: 1 Rafael AraujoGomes Junior Efeitos....pdf: 34966477 bytes, checksum: 15df6dc2a7def6eca56bbb84930c6ae3 (MD5) Previous issue date: 2014
Fundação Oswaldo Cruz. Centro de Pesquisas Gonçalo Moniz. Salvador, BA, Brasil
A candidíase é uma infecção oportunista provocada por diversas espécies de fungos do gênero Candida, frequentemente encontrados integrando a microbiota, da superfície cutânea, no trato gastrointestinal e cavidades mucosas do ser humano desde o seu nascimento. A incidência das infecções fúngicas sistêmicas têm aumentado consideravelmente nas últimas décadas em função do grande número de pacientes com SIDA, a grande quantidade de transplantes e condições crônicas como o câncer, a terapia prolongada com imunossupressores e o uso de agentes corticosteroides. Além disso, a exposição prolongada aos antifúngicos azólicos promove a seleção de patógenos resistentes. No presente estudo avaliou-se a atividade antifúngica do complexo Rutênio-pirocatecol (RPC) frente a um isolado clinico de Candida tropicalis resistente ao fluconazol. A metodologia empregada para os testes de susceptibilidade foi de acordo com o documento M27-A3 do National Committee for Clinical Laboratory Standards (NCCLS, 2008). Esplenócitos de camundongos Balb/c foram obtidos de forma asséptica para avaliar a citotoxicidade do composto para células de mamíferos. O estresse oxidativo promovido pelo composto foi avaliado através da reação ao ácido tiobarbitúrico (TBARS) e ensaios de fluorescência com a sonda diclorodihidrofluoresceína diacetato (DCFH2DA). O Calcofluor White foi empregado para avaliar a integridade da parede celular. A análise ultraestrutural foi realizada através da microscopia eletrônica de varredura e transmissão. Os resultados encontrados para os testes de atividade antifúngica foram analisados através do teste estatístico ANOVA e pós-teste Dunnett. Os resultados encontrados para os testes de atividade antifúngica do RPC mostraram uma Concentração Inibitória de 50% (IC50) de 20,3 μM, enquanto em esplesnócitos a concentração efetiva de 50% foi de 325 μM mostrando um índice de seletividade igual a 16. O referido composto também mostrou um elevado efeito pró-oxidante quando avaliamos os níveis de estresse oxidativo através da TBARS e por meio da sonda DCFH2DA. Quando as leveduras foram tratadas por 24 h com o referido composto, observamos na microscopia de varredura o desenvolvimento de pseudo-hifas com 9 μM, a formação de fissuras em sua parede e uma forte agregação das células com 18 μM, além disso, encontramos uma intensa redução na quantidade de células e muito debris celular com 38 μM. Na microscopia de transmissão observamos estruturas vesiculares no espaço periplasmático associado a grânulos eletrondensos, os quais também foram vistos associados a parede celular, quando tratadas por 3h com 40 μM. No tratamento por 24h com 60 μM observamos a referida estrutura granular eletrondensa no citoplasma envolta por membrana, uma grande quantidade destas estruturas no espaço citoplasmático e associado a parede da célula, além disso, também observamos trechos de membrana associado a estas estruturas no espaço extracelular. Em conclusão, a atividade antifúngica e o índice de seletividade do RPC contra uma cepa resistente é consideravelmente interessante devido as suas possibilidades de aplicações na descoberta de novos antifúngicos
Candidiasis is an opportunistic infection caused by several species of fungi of the genus Candida, often found is the microbiota, on the skin, gastrointestinal tract and mucous cavities of the human beings birth. The incidence of systemic fungal infections have increased considerably in recent decades due to the large number of AIDS patients, the large number of transplants and chronic conditions such as cancer, prolonged therapy promotes the selection of resistant pathogen with immunosuppressant and corticosteroid agents. Also prolonged exposure azole antifungals to make them strong candidates for patients resistance. In the present study we evaluated the antifungal activity of Ruthenium-pyrocatechol complex (RPC) against a clinical isolate of Candida tropicalis resistant to fluconazole. The methodology for susceptibility testing was in accordance with the M27-A3 document of there National Committee for Clinical Laboratory Standards (NCCLS, 2008). Splenocytes from Balb/c mice were obtained aseptically to evaluate the cytotoxicity of the compound to mammalian cells. Oxidative stress caused by the compound was assessed by reaction to thiobarbituric acid (TBARS) and fluorescence assays with the probe diclorodihidrofluoresceína diacetate (DCFH2DA). The Calcofluor White was used to evaluate the integrity of the cell wall. The ultrastructural analysis was performed by scanning and transmission electron microscopy. The results for the antifungal activity tests were analyzed using ANOVA and pos-test Dunnett test statistic. The results for the tests of antifungal activity of the RPC showed a 50% inhibitory concentration (IC50) of 20.3 μM while in splenocytes the 50% effective concentration was 325 μM showing a selectivity index of 16. The compound also showed that a high pro-oxidant effect when evaluated levels of oxidative stress by TBARS and through DCFH2DA staining. When yeast cells were treated for 24 h with this probe, in scanning microscopy we observed the development of pseudohyphae 9 μM, the formation of cracks on their fungal walls and in these cell aggregation with 18 μM furthermore found a remarkable reduction in the number of cells, and cell debris with 38 μM. In transmission microscopy vesicular structures observed in the periplasmic space associated with electrondense granules, which were also seen associated with the cell wall, when there cells were treated for 3 h with 40 μM. In the treatment for 24h with 60 μM observed that the grain structure in the clusters in periplasmic, a large amount of these structures in the cytoplasmic space and associated with the cell wall, moreover, we also observe membrane portions associated with these structures in the extracellular space. In conclusion, the antifungal activity and the selectivity index RPC against a resistant strain is pretty interesting because of its possible applications in the discovery of new antifungal agents.

On etudie la reactivite chimique de complexes polyhudrures de ruthenium apres activation thermique ou photochimique. Certains complexes pentamethylcyclopentadienyl sont egalement prepares et etudies en spectroscopie rmn du proton

Na busca por novos materiais doadores de óxido nítrico (NO), o presente trabalho descreve o desenvolvimento de um filme à base de amido de mandioca, no qual foi incorporado um nitrosilo complexo de rutênio, e o estudo da liberação de NO nesse material. O nitrosilo complexo trans-[Ru(NH3)4(isn)NO](BF4)3 (RuNOisn; isn = isonicotinamida) apresenta a propriedade de liberar NO de forma controlada, por meio de fotólise (λirr = 310-370 nm) e de redução química. A incorporação desse complexo em filmes de amido foi realizada em condições brandas, resultando em um novo material para o armazenamento e liberação de NO, designado como CSx-RuNOisn. Os ensaios espectroscópicos indicaram que a esfera de coordenação do complexo RuNOisn permaneceu inalterada durante a produção dos filmes. A exposição de CSx-RuNOisn à luz (λirr = 355 nm) levou à liberação de NO e provavelmente à formação do fotoproduto trans [RuIII(NH3)4isn(H2O)]3+ no filme. A reação desse aquocomplexo de rutênio(III) com solução aquosa contendo nitrito de sódio regenerou o complexo de partida, RuNOisn. A identificação e quantificação do NO liberado durante a fotólise foi efetuada por meio da reação com oximioglobina. Durante o tempo de irradiação de 17 minutos, foram liberados 5,02 ± 0,12 μM de NO (10, 04 ± 0,24 nmol NO em 2 mL). Os ensaios de liberação de NO desencadeada por redução foram realizados utilizando-se L-cisteína como redutor. O fluxo de NO liberado a partir da reação com cisteína perdurou por mais de 7 horas, alcançando-se concentrações fisiologicamente relevantes, com fluxo médio de 1,9 pmol NO s-1 cm-2 de filme. Esse valor é comparável àquele produzido por células endoteliais, em que o fluxo de NO é de 1,67 pmol s-1 cm-2. Os resultados preliminares de degradação dos filmes in vivo sugerem que o material foi degradado pelo organismo em 30 dias. Todos os resultados alcançados sugerem que o filme CSx-RuNOisn é um candidato promissor para aplicações em meio biológico. Um novo complexo de rutênio contendo o ligante nitrosilsulfito (N(O)SO3 -) foi isolado, trans [Ru(NH3)4(isn)(N(O)SO3)](X) (isn = isonicotinamida, X = PF6- ou SiPF6 2-), e a sua estrutura cristalina determinada por difração de raio-X. A síntese desse complexo foi realizada por meio da reação entre trans-[Ru(NH3)4(isn)(NO)]3+ e íons sulfito (SO32-). O ataque nucleofílico do SO32- ocorreu no nitrogênio do ligante nitrosônio (NO) coordenado ao centro metálico de rutênio ([Ru-NO+]), originando o ligante O=N-SO3-: [RuNO+]3+ + SO32- →[Ru(N(O)SO3)]+. Observou-se que em meio aquoso, no intervalo de pH de 7,4 a 5,2 o complexo trans [Ru(NH3)4(isn)(N(O)SO3)]+ é estável, e a velocidade de decomposição (labilização do ligante isn) variou de k = 0,86 a 3,07 × 10-5 s-1. Em soluções mais ácidas (tampão ácido acético/acetato pH 4,2, 3,9, ou 1,0 M ácido trifluoroacético) o complexo trans-[Ru(NH3)4(isn)(N(O)SO3)]+ decompõe-se formando o respectivo nitrosilo complexo trans- [RuII(NH3)4(isn)NO+]3+. A reação do íon trans-[Ru(NH3)4(isn)(N(O)SO3)]+ com íons hidróxido (OH-) dá origem ao respectivo nitro complexo trans-[Ru(NH3)4(isn)(NO2)]+, que foi caracterizado por RMN de 15N e por espectroscopia eletrônica. As constantes de velocidade para essa reação são k = 6,16 ± 0,22 M-1 s-1 à T = 25oC, e k = 2,15 ± 0,07 M-1 s-1 à T = 15oC. A reação entre o nitrosilo complexo trans [RuII(NH3)4(isn)NO+]3+ e íons OH- também resulta na formação do nitro complexo trans-[Ru(NH3)4(isn)(NO2)]+. Neste caso, a constante de velocidade foi estimada entre k = 47-58 M-1 s-1 à T = 25oC, e o valor obtido experimentalmente à T = 15oC foi de k = 10,53 ± 0,29 M-1 s-1. O espectro eletrônico do íon complexo trans [Ru(NH3)4(isn)(N(O)SO3)]+ em meio aquoso apresentou uma banda larga com λ max = 362 nm (ε ∼6000 M-1 cm-1), atribuída por cálculos teóricos às seguintes transições: transferência de carga do metal para o ligante (TCML) Ru → N(O)SO3 e Ru → isn, e também d → d. Os ensaios preliminares de fotólise (λ irrad = 355 nm) do complexo trans[Ru(NH3)4(isn)(N(O)SO3)](PF6) em solução de tampão fosfato (pH 7,4) sugerem a formação das seguintes espécies nos intervalos iniciais de fotólise: i) NO, ii) SO3 •-, e iii) isn (labilizado do complexo). O mecanismo para a formação desses produtos ainda está sob investigação.
Aiming the production of new nitric oxide releasing materials (NORM), this work reports the development of a cassava starch based film, in which a ruthenium nitrosyl complex was impregnated, and evaluate the NO release from this film. Ruthenium nitrosyl complex trans-[Ru(NH3)4(isn)NO](BF4)3 (RuNOisn; isn = isonicotinamide) is able to release NO in a controlled manner through both photolysis (λirr = 310-370 nm) and chemical reduction. The incorporation of such complex into the starch-based films was performed under mild conditions, yielding a new material able to store and release NO, abbreviated as CSx-RuNOisn. Spectroscopic analysis of CSx-RuNOisn indicated that the coordination sphere of RuNOisn remained intact during film production. Exposure of CSx-RuNOisn to long wave UV-light (λirr = 355 nm) leads to NO release and likely to the formation of the paramagnetic photoproduct trans-[RuIII(NH3)4isn(H2O)]3+ in the film. Reaction of this aquoruthenium(III) complex with aqueous nitrite regenerates RuNOisn in the film. Delivery of NO upon photolysis of CSx-RuNO isn was verified and quantified by trapping with oxymyoglobin. The calculated concentration of NO released from the film was 5.02 ± 0.12 μM (10.04 ± 0.24 nmol NO in a 2 mL) after approximately 17 min of irradiation (500 laser pulses at 2 s intervals). Moreover, NO release upon chemical reduction was carried out using L-cysteine as a reductant. Cysteine-mediated NO delivery from CSx-RuNOisn persisted for more than 7 h, during which physiologically relevant NO concentrations were liberated (average flux of 1.9 pmol NO s-1 cm-2 of film). This value is comparable to that produced by endothelial cells (1.67 pmol s-1 cm-2). Preliminary results about the biodegradation of the films in vivo suggest that the films were completely absorbed by the organism in a period of 30 days. These results suggest that CSx-RuNOisn is a promising candidate for use in biological applications. A new nitrosylsulphito complex bearing the ligand (N(O)SO3-) was isolated, trans-[Ru(NH3)4(isn)(N(O)SO3)](X) (isn = isonicotinamide, X = PF6- or SiPF6-), and its structure was determined by X-Ray crystallography. This complex was obtained by the reaction between trans-[Ru(NH3)4(isn)(NO)]3+ and sulfite ions (SO32-). X-Ray results confirmed that the nucleophilic attack of the sulphite anion (SO32-) was on the nitrogen atom of the nitrosyl ligand (NO) coordinated to the ruthenium center ([Ru-NO+]), yielding the ligand O=N-SO3-: [RuNO+]3+ + SO32- → [Ru(N(O)SO3)]+. Complex trans- [Ru(NH3)4(isn)(N(O)SO3)]+ is stable in aqueous solution from pH 7.4 to 5.2, and the decomposition rates (k) (due to the isn labilization) are in the range of k = 0.86-3.07 × 10-5 s-1. In more acidic conditions, (acetate buffer pH 4.2, 3.9, and trifluoroacetic acid solution 1.0 M) complex trans-[Ru(NH3)4(isn)(N(O)SO3)]+ is converted into the respective nitrosyl trans-[RuII(NH3)4(isn)NO+]3+. Reaction of trans-[Ru(NH3)4(isn)(N(O)SO3)]+ and hydroxide ions (OH-) yielded the nitro complex trans-[Ru(NH3)4(isn)(NO2)]+, which was characterized by 15N NMR and electronic spectroscopy. Rate constants for such reaction are k = 6.16 ± 0.22 M-1 s-1 at 25oC, and k = 2.15 ± 0.07 M-1 s-1 at 15oC. In the case of complex trans-[RuII(NH3)4(isn)NO+]3+, its reaction with OH- also yield the nitro complex trans-[Ru(NH3)4(isn)(NO2)]+. The estimated rate constant for such reaction was k = 46.9-57.6 M-1 s-1 at 25oC, and the experimental value obtained at 15oC was k = 10.53 ± 0.29 M-1 s-1. The ion complex trans-[Ru(NH3)4(isn)(N(O)SO3)]+ showed an intense and broad band at 362 nm (ε∼6000 M-1 cm-1) in aqueous solutions, which was assigned by DFT calculations to the following transitions: metal to ligand charge transfer (MLCT) Ru→N(O)SO3 and Ru→isn, and d→d as well. Preliminary photolysis assays (λirrad = 355 nm) performed with complex trans-[Ru(NH3)4(isn)(N(O)SO3)](PF6) in phosphate buffer solution (pH 7,4) suggests that the following species have been formed (in the initial photolysis period): i) NO, ii) SO3•-, and iii) isn (labilized). The whole mechanism to yield such products is still under investigation.

"December 2003"
Bibliography: leaves 229-240.
x, 240 leaves : ill. (some col.) ; 30 cm.
Title page, contents and abstract only. The complete thesis in print form is available from the University Library.
Thesis (Ph.D.)--University of Adelaide, School of Chemistry and Physics, Discipline of Chemistry, 2004

One microfiche--`Data from crystal structures solved by the author`--in pocket
Bibliography: leaves 172-174
174 leaves : ill ; 30 cm.
Title page, contents and abstract only. The complete thesis in print form is available from the University Library.
Thesis (Ph.D.)--University of Adelaide, Dept. of Physical and Inorganic Chemistry, 1987

One microfiche--`Data from crystal structures solved by the author`--in pocket
Bibliography: leaves 172-174
174 leaves : ill ; 30 cm.
Thesis (Ph.D.)--University of Adelaide, Dept. of Physical and Inorganic Chemistry, 1987

Ruthenium carbene complexes, with the general structure, [LL’Ru=CHR], are commonly known as Grubbs type catalysts, named after the discoverer of these metathesis catalysts. The discovery was quite revolutionary, since the catalysts proved to be easy to handle, tolerant towards various functional groups and more stable with regard to air and water than previous transition metal catalysts. Another important advantage was that all types of olefin metathesis reactions could be initiated without the help of co-catalysts or promoters. Today Grubbs type catalysts find wide application in especially organic and synthetic chemistry. A well-known example is the SHOP-process which produces long chain -olefins, while other important applications include the synthesis of macro-cyclic and cyclic olefins. The current study involved experimental and theoretical work to investigate various aspects comprising synthetic procedures, reactivity, kinetics, geometry and electronic properties of the complexes. Results are discussed briefly in the following paragraphs. The first aim of the project was to synthesise a Grubbs type catalyst. Initial efforts were focused on the preparation of a first generation catalyst through various methods. This included modifying the reported method for the synthesis of [(PPh3)2Cl2Ru=CH-CH=CMe2] to yield [(PPh2Cy)2Cl2Ru=CHCH= CMe2] instead; a phosphine exchange reaction with the complex [(PPh3)2Cl2Ru=CH-CH=CMe2] and free phosphine PPh2Cy; and utilising the analogue arsine ligand, AsPh3, to synthesise [(AsPh3)2Cl2Ru=CHCH=CMe2]; but unfortunately no success was achieved. However, it was possible to synthesise a novel second generation Grubbs type catalyst, [(IMesH2)(PPh2Cy)Cl2Ru=CHPh], through the phosphine exchange reaction of [(IMesH2)(NC5H5)2Cl2Ru=CHPh] and PPh2Cy. The new complex was tested in kinetic reaction studies and phosphine exchange reactions. Results showed that [(IMesH2)(PPh2Cy)Cl2Ru=CHPh] was catalytically active for the ring closing metathesis of commercial diethyl diallylmalonate. The reaction was first order with regard to the olefin, contrary to the second order kinetic results reported for similar reactions catalysed by first generation Grubbs catalysts. The phosphine exchange reactions were very successful and a rate constant could be determined. The rate constant was independent of the free phosphine concentration and activation parameters had relatively large, positive values; results indicative of a dissociative mechanism. These findings are in correlation with literature reports. A kinetic investigation was done on the catalyst-olefin coordination involving the functionalized olefins vinyl acetate, allyl acetate and allyl cyanide; and the first generation Grubbs catalyst, [(PCy3)2Cl2Ru=CHPh]. A two-step rate law, similar to an interchange mechanism, was determined. Phobcat, [(PhobCy)2Cl2Ru=CHPh], is modified first generation Grubbs type catalyst with rigid bicyclic phosphine rings which was recently developed by the Sasol Homogeneous Metathesis Group. In the current study Phobcat was compared to Grubbs1-PCy3 in the cross metathesis reaction of 1-octene. Results showed that Phobcat was up to 60% more active and had a 5 hour longer lifetime than Grubbs 1-PCy3. Theoretical studies were done on the three functionalized olefins of the earlier experimental study to gain fundamental understanding of steric and electronic influences on these catalyst-olefin systems. Without exception, coordination via the heteroatom of the olefin was significantly more favourable than coordination via the double bond functionality. This result indicates that metathesis of these olefins is highly unlikely, since the stable heteroatom coordination will suppress the parallel Ru=C/C=C interaction which is compulsory for the metathesis reaction. Orbital studies highlighted the difference between coordination of acetate and cyanide, but no trend of an electronic nature could be recognised.
Prof. A. Roodt

Nucleophilic additions are an important class of reactions in the preparation of several organic compounds. Metals facilitate nucleophilic additions in many cases. The present work Mechanistic Investigation of Metal Promoted Nucleophilic additions is an attempt to understand the mechanism of nucleophilic additions to imines and carbonyl compounds mediated by the transition metal complexes. Understanding the mechanism of metal promoted nucleophilic additions can facilitate the design and synthesis of more efficient catalysts. Chapter 1 provides a brief introduction to nucleophilic addition. A few named reactions that involve nucleophilic addition are described. An overview of the metal promoted nucleophilic addition reactions and their mechanisms are presented. A short note on the importance of understanding the mechanism of metal promoted nucleophilic addition is included. This section ends with the scope of the present work. Chapter 2 “Mechanistic Investigation of Titanium Mediated Reactions of Imines” deals with two reactions. The first reaction is the formation of reduced amines on reduction of imines. Amines and diamines are synthesized often from imines. A convenient route to such nitrogen containing compounds is through reduction of imines and through reductive coupling of imines respectively. Since both reactions occur in a parallel fashion, during the synthesis of diamines, amines are obtained as side products and vice versa. This problem is acute in the case of titanium based reducing agents. These reducing agents are called low valent titanium reagents because low valent titanium species are generated in situ either from titanium(IV) or titanium(III) reagents. There is no clear understanding of the nature of the low valent titanium involved in the reaction. To rectify this, a mechanistic understanding of this reaction is essential. An attempt was made to probe the mechanism of formation of amines using low valent titanium formed by using two different reducing agents namely phenylsilane and zinc. With the help of isotopic labelling studies, it was found that the mechanism of formation of an amine with phenylsilane involves a direct hydrogen transfer from phenylsilane to an imine. This was verified using deuterium labelled phenylsilane. With zinc, it follows a traditional titanacycle pathway which was verified by quenching with the deuterium oxide. A second reaction that has been probed is the alkylation of imines by Grignard reagents using chiral titanium complexes. Alkylation of imines is one of the suitable routes to prepare chiral amines. Alkylation of imines employing a Grignard reagent with Ti(OiPr)4 can proceed through two different pathways depending on the amount of the Grignard reagent used. Alkylation reaction with one equivalent of Grignard reagent can proceed through a Ti(IV) species and the alkylation reaction with two equivalents of the Grignard reagent can proceed through a Ti(II) species. The reaction proceeding through Ti(IV) is less wasteful as it only requires one equivalent of the Grignard reagent. The two pathways differ from each other in the nature of the transition state where the C-C bond is formed. To verify the favourable pathway, chiral titanium complexes were prepared and alkylation carried out. The alkylation results suggest that one equivalent of Grignard is sufficient to give good yields of the alkylated product and the reaction may proceed through a Ti(IV) promoted path. It was reported in the literature that at least three equivalents of Grignard reagent are required to get good yields of the alkylated product with zirconium complexes. This work suggests a greener alternate to alkylation of imines. Chapter 3 “Asymmetric Transfer Hydrogenation Reaction of Ketones in Water” deals with the synthesis of chiral ruthenium half-sandwich complexes employing a proline diamine ligand which has phenyl, ethyl, benzyl, or hydrogen as a substituent. These complexes were characterized by X-ray diffraction. In addition, all these complexes were obtained as single diastereoisomers. These complexes were used as catalysts for the reduction of a variety of ketones to chiral alcohols in water using sodium formate as a hydride source. Stoichiometric reaction between sodium formate and the catalysts showed the formation of hydride complexes as the active species. Based on the electronic effects observed, the key step is found to be a nucleophilic attack of hydride on the carbonyl carbon of ketones. In the transfer hydrogenation reaction with DCOONa, more of 1-phenylethanol- 1-2H1 was observed with all the ruthenium catalysts suggesting that the hydrogen from sodium formate is transformed into a metal hydride which is subsequently transferred to the ketones to form chiral alcohols. The catalysts were optimized with acetophenone as a model substrate. Only in the case of a catalyst which has a phenyl substituent, silver nitrate was found to enhance the formation of aqua complex which in turn resulted in good yields of the chiral alcohols. Among all the complexes studied, the catalyst bearing a phenyl group induces greatest enantioselectivity. It can also be recycled. Chapter 4 “On the Formation of a Ruthenium-PPh2H Complex Using 1- Phenylethane-1,2-diol” deals with the mechanism of formation of PPh2H from PPh2Cl. This unique transformation involves a ruthenium-cymene dimer, PPh2Cl and 1-phenylethane-1,2- diol. In the attempted synthesis of a ruthenium bisphosphinite complex, using the ruthenium-cymene dimer, chlorodiphenylphosphine and 1-phenylethane-1,2-diol, the formation of [Ru(η6-cymene)Cl2PPh2H] was observed in good yield. Formation of the expected ruthenium bisphosphinite complex was not observed. The reaction was carried out in the absence of 1-phenylethane-1,2-diol resulted in the formation of [Ru(η6- cymene)Cl2PPh2Cl] suggests that the diol acts as a reducing agent. To verify the source of hydrogen in the 1-phenylethane-1,2-diol, deuterated diols were prepared. The reactions with the deuterated diols revealed several interesting aspects of the formation of the Ru-PPh2H complex. Chapter 5 “Mechanistic Studies on the Diazo Transfer Reaction” deals with the synthesis of labelled azides and the labelled azidating reagent to probe the mechanism of the diazo transfer reaction. Azides are important precursors used for a variety of chemical transformations including the celebrated Cu(I) catalyzed click reaction. Azides are also used as protecting groups for amines as they can be conveniently reduced to amines. Azidation of amines usually yield azides, with retention of stereochemistry. There is a possibility that the azide formation can occur through the SNi mechanism with retention of configuration where nitrogen in the starting material will not be retained after forming an azide. The reaction was carried out with 13C and 15N labelled L-valine and L-isoleucine to probe this possibility. The resultant labelled azide has 15N retained in its position. This excluded the SNi pathway. To show where the nucleophilic amine group is attacking the azide, labelled imidazole-1¬sulfonyl azide was synthesized from NaN215N. Reactions were carried out with L-valine (labelled and unlabelled) in the presence of a metal catalyst and with unlabelled L-valine in the absence of catalyst. These results confirm the postulated pathways described in the literature.