Academic literature on the topic 'RNA fingerprinting'
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Journal articles on the topic "RNA fingerprinting"
Gegenheimer, Peter. "Electronic fingerprinting of RNA." Nucleic Acids Research 16, no. 5 (1988): 1799–800. http://dx.doi.org/10.1093/nar/16.5.1799.
Full textGegenheimer, Peter. "Electronic fingerprinting of RNA." Nucleic Acids Research 16, no. 5 (1988): 1801–12. http://dx.doi.org/10.1093/nar/16.5.1801.
Full textKato, K. "RNA fingerprinting by molecular indexing." Nucleic Acids Research 24, no. 2 (January 15, 1996): 394–95. http://dx.doi.org/10.1093/nar/24.2.394.
Full textSingh, Ankita, Akhilesh Mishra, Ali Khosravi, Garima Khandelwal, and B. Jayaram. "Physico-chemical fingerprinting of RNA genes." Nucleic Acids Research 45, no. 7 (December 8, 2016): e47-e47. http://dx.doi.org/10.1093/nar/gkw1236.
Full textWelsh, John, Kiran Chada, Seema S. Dalal, Rita Cheng, David Relph, and Michael McClelland. "Arbitrarily primed PCR fingerprinting of RNA." Nucleic Acids Research 20, no. 19 (1992): 4965–70. http://dx.doi.org/10.1093/nar/20.19.4965.
Full textMcClelland, M., and J. Welsh. "RNA fingerprinting by arbitrarily primed PCR." Genome Research 4, no. 1 (August 1, 1994): S66—S81. http://dx.doi.org/10.1101/gr.4.1.s66.
Full textCarter, R. E., J. H. Wetton, and D. T. Parkin. "Improved gentic fingerprinting using RNA probes." Nucleic Acids Research 17, no. 14 (1989): 5867. http://dx.doi.org/10.1093/nar/17.14.5867.
Full textRymerson, R. T., R. P. Bodnaryk, S. Haber, and J. D. Procunier. "Arbitrary primed RNA fingerprinting in plants." Biotechnology Techniques 9, no. 8 (August 1995): 563–66. http://dx.doi.org/10.1007/bf00152444.
Full textAugéde Mello, P., R. C. Olascoaga, M. P. Costa Giomi, A. Alonso Fernández, E. A. Scodeller, J. L. La Torre, and I. E. Bergmann. "RNA fingerprinting of South American prototype aphthovirus strains." Vaccine 4, no. 2 (June 1986): 105–10. http://dx.doi.org/10.1016/0264-410x(86)90047-2.
Full textLozano, Gloria, Reyes Jimenez-Aparicio, Santiago Herrero, and Encarnacion Martinez-Salas. "Fingerprinting the junctions of RNA structure by an open-paddlewheel diruthenium compound." RNA 22, no. 3 (January 12, 2016): 330–38. http://dx.doi.org/10.1261/rna.054353.115.
Full textDissertations / Theses on the topic "RNA fingerprinting"
Hurtado, Ana Isabel. "Large-subunit ribosomal RNA gene of Helicobacter and Campylobacter species : its role in genotypic identification and typing." Thesis, Queen Mary, University of London, 1997. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.265831.
Full textPROCACCIANTI, CLAUDIO. "Quantitative evaluation of in vitro transformation by analysis of morphological and biochemical markers and statistical descriptors." Doctoral thesis, Università degli Studi di Milano-Bicocca, 2012. http://hdl.handle.net/10281/28450.
Full textBeatini, Salvatore J. "Using DNA fingerprinting to assess genetic structure of the vernal pool amphibian rana sylvatica." Link to electronic thesis, 2003. http://www.wpi.edu/Pubs/ETD/Available/etd-0428103-153026.
Full textKeywords: wood frog; vernal pool conservation; fragmented habitat; Rana sylvatica; DNA fingerprinting. Includes bibliographical references (p. 38-40).
Nai, YH. "Capillary electrophoresis of ribosomal RNA for characterisation of microbial communities." Thesis, 2013. https://eprints.utas.edu.au/17552/1/front-_Nai-_thesis.pdf.
Full textRumpler, Gerhard [Verfasser]. "Molekulare Determinanten des Melanomwachstums, der Invasion und der Metastasierung : eine Analyse basierend auf RNA-Fingerprinting und cDNA-Arrays / vorgelegt von Gerhard Rumpler." 2002. http://d-nb.info/964444968/34.
Full textHoang, Minh Tu. "WiFi fingerprinting based indoor localization with autonomous survey and machine learning." Thesis, 2020. http://hdl.handle.net/1828/12091.
Full textGraduate
cheng, chen-li, and 鄭振利. "Study of the bacterial community in a Triton X-100 bioredmediation system by 16S rDNA fingerprinting." Thesis, 2002. http://ndltd.ncl.edu.tw/handle/70834767445816533355.
Full text國立中央大學
生命科學研究所
90
Triton X-100 is a non-ionic detergent and it often used in industrial, agricultural and household area. There are 5~85% surfactants mixing in the pesticides and herbicides. It can be directly introduced into the environment by spraying the pesticides as well as the herbicides through agricultural activities. The structure of the surfactant includes both hydrophilic and hydrophobic group. In addition to the toxicity, its chemical property also has great influence on the organic contaminants fates in the soil and even impacts public health. The focal point in this study is to use 16S ribosomal DNA fingerprinting method and denaturing gradient gel electrophoresis (DGGE) to analyze the community in the surfactant-polluted soil. Besides monitoring the relationship of community and Triton X-100, we added Pseudomonas sp. SH4 to see what changed in the community and Triton X-100 biodegradation. In this study, we used the microcosm which contained surfactant-like polluted soil over a long period of time to proceed with the research of surfactant bioremediation. There were 4.35 g Triton X—100 degrading in the SH4-added groups (72.5% of the original Triton X-100 weight). We chose the sample to proceed with 16S rDNA cloning library. Then we identified 11 strains by DGGE screening. From the phylogenetic analysis we knew that they were belong to the α, β, γ-proteobacteria. (except of the Flavobacterium sp. wuba 46) In the DGGE fingerprinting we found that Pseudomonas sp. SH4, Stenotrophomonas maltophilis, and Agrobacterium tumefaciens Zutra F/1 were dominant strains in the third group. Also, Pseudomonas sp. SH4, Stenotrophomonas maltophilia, Stenotrophomonas sp., and Stenotrophomonas maltophilia were dominant in the fourth, fifth, and sixth groups. In the group with SH4 and Triton X-100 but without air, we found that Agrobacterium tumefaciens Zutra F/1 and clone 4-70 (uncultured beta proteobacterium) are also dominant strains. Two microcosms contained Pseudomonas sp. SH4 and kept pumping air, but one of them was 30℃ fixed controlled. Two months later, 6 g Triton-100 were degraded completely. Whereas, the groups without SH4 degrader still contained about 2.67 g Trioton-100. Even three months later, 1.45 g Triton-100 would still be detected. As a result, Pseudomonas sp. SH4 plays an important role in the bioremediation.
Abdennadher, Mourad. "Molecular fingerprinting, rDNA internal transcribed spacer sequence, and karyotype analysis of Ustilago hordei and related smut fungi." Thesis, 1995. http://hdl.handle.net/1957/34737.
Full textGraduation date: 1996
Martins, Cândida Filipa Gonçalves. "Caracterização fenotípica e genotípica de bactérias do ácido acético isoladas de alimentos." Master's thesis, 2014. http://hdl.handle.net/10348/3373.
Full textAs bactérias do ácido acético (BAA) são responsáveis pela produção de vários subprodutos muito utilizados na indústria alimentar. Podem atuar como agentes de transformação no caso do vinagre e como agentes de contaminação no caso do vinho. Neste trabalho, a resistência das bactérias acéticas a vários fatores de stress que ocorrem durante a produção industrial de vinagre, foi avaliada. Para tal, foram utilizadas 70 isolados provenientes de uvas sãs e podres, mostos, vinhos, sãos e alterados, e vinagres caseiros. A capacidade de resistência a diferentes condições de etanol, ácido acético, SO2 e pH e o efeito cruzado da temperatura foi avaliada por crescimento em meio de cultura sólidos. Foi observada uma grande variabilidade na resistência às diferentes condições testadas, sendo que a temperatura de incubação foi diretamente correlacionada com o aumento da sua sensibilidade. Foi observado que apenas um número reduzido destas bactérias demonstram capacidade para produzir aminas biogénicas nomeadamente a histamina (3%), e a putrescina (5%). Por outro lado, as bactérias acéticas estudadas revelaram um perfil de multiresistência a vários antibióticos o que sugere que estudos posteriores deverão ser conduzidos de forma a avaliar o seu impacto em termos de segurança alimentar. Com o objetivo de proceder à identificação dos isolados foram incluídas neste trabalho sete estirpes de referência, pertencentes à Colecção Espanhola de Culturas Tipo (CECT). A utilização da técnica de PCR fingerprinting com os primers M13, ERIC e (GTG)5 não permitiu obter a identificação credível dos isolados em estudo. Pela análise das sequências parciais do rDNA 16S foi possivel a identificação de 17 estirpes selecionadas aleatoriamente o que permitiu inferir a identificação de outros isolados. Assim, um grupo de estirpes identificados como Acetobacter pasteurianus foi caracterizado genotípicamente, tendo-se verificado uma grande variabilidade, também traduzida nos parâmetros fenotípicos avaliados.
Acetic acid bacteria (AAB) are responsible for the production of some interesting products, very useful for a variety of industries including food industry. They can have a positive role as transformation agents in vinegar production, but their growth is undesirable in the the wine industry being responsible for wine spoilage. In this work, the resistance of the acetic bacteria to some stress factors that they may encounter during production of vinegar, was evaluated. For such purpose, 70 acetic bacteria strains isolated from healthy and rotten grapes, grape-juices, wines, either spoiled or not, and vinegars, were used. The resistance of the isolates to different conditions of ethanol, acetic acid, SO2 and pH and the cross-effect of temperature was evaluated by its growth in solid culture media. A great variability in the resistance to the different tested conditions was observed, being temperature of incubation directly correlated with the increase of its sensitivity. Only a reduced number of these bacteria demonstrated capacity to produce biogenic amines, like histamine (3%) and putrescine (5%). On the other hand, acetic bacteria displayed an antibiotic multiresistance profile suggesting that further studies should be performed to assess its impact on food safety and public health. In order to identify the natural isolates used, seven reference strains belonging to the Spanish Type Culture Colection (CECT) were included in this work. PCR fingerprinting technique using M13, ERIC e (GTG)5 primers did not allow a reliable identification of the strains. Yet, 17 randomly selected strains were identified by analysis of the partial sequences of 16S rDNA which allowed us to infer the identification of some other isolates through the analysis of similarity of genotypic profiles obtained. The genotypic dissimilarity observed within the group of strains identified as Acetobacter pasteurianus was correlated with its divergence phenotypic profiles.
Books on the topic "RNA fingerprinting"
Peter, Bugert, ed. DNA and RNA profiling in human blood: Methods and protocols. New York, NY: Humana Press, 2009.
Find full textPeng, Liang, Meade Jonathan D, and Pardee Arthur B. 1921-, eds. Differential display methods and protocols. 2nd ed. Totowa, N.J: Humana Press, 2005.
Find full textDifferential display methods and protocols. Totowa, N.J: Humana Press, 1997.
Find full textPeng, Liang, and Pardee Arthur B. 1921-, eds. Differential display methods and protocols. Totowa, N.J: Humana Press, 1997.
Find full textMcClelland, Michael, ed. Expression Genetics: Differential Display (Biotechniques Update Series). EATON PUBLISHING, 1999.
Find full textPardee, Arthur B., Peng Liang, and Jonathan Meade. Differential Display Methods and Protocols. Humana Press, 2010.
Find full text(Editor), Peng Liang, Jonathan Meade (Editor), and Arthur B. Pardee (Editor), eds. Differential Display Methods and Protocols (Methods in Molecular Biology). 2nd ed. Humana Press, 2005.
Find full textAbdennadher, Mourad. Molecular fingerprinting, rDNA internal transcribed spacer sequence, and karyotype analysis of Ustilago hordei and related smut fungi. 1995.
Find full textBook chapters on the topic "RNA fingerprinting"
Stone, B. "Targeted RNA Fingerprinting." In Fingerprinting Methods Based on Arbitrarily Primed PCR, 371–87. Berlin, Heidelberg: Springer Berlin Heidelberg, 1997. http://dx.doi.org/10.1007/978-3-642-60441-6_38.
Full textRicote, M., J. Welsh, and M. McClelland. "RNA Arbitrarily Primed PCR." In Fingerprinting Methods Based on Arbitrarily Primed PCR, 283–93. Berlin, Heidelberg: Springer Berlin Heidelberg, 1997. http://dx.doi.org/10.1007/978-3-642-60441-6_29.
Full textBosch, T. C. G., and J. Lohmann. "Nonradioactive Differential Display of Messenger RNA." In Fingerprinting Methods Based on Arbitrarily Primed PCR, 295–304. Berlin, Heidelberg: Springer Berlin Heidelberg, 1997. http://dx.doi.org/10.1007/978-3-642-60441-6_30.
Full textVaughan, Robert C., and C. Cheng Kao. "Mapping Protein–RNA Interactions by RCAP, RNA-Cross-Linking and Peptide Fingerprinting." In Methods in Molecular Biology, 225–36. New York, NY: Springer New York, 2015. http://dx.doi.org/10.1007/978-1-4939-2562-9_16.
Full textMcClelland, M., K. Chada, J. Welsh, and D. Ralph. "Arbitrary primed PCR fingerprinting of RNA applied to mapping differentially expressed genes." In DNA Fingerprinting: State of the Science, 103–15. Basel: Birkhäuser Basel, 1993. http://dx.doi.org/10.1007/978-3-0348-8583-6_10.
Full textValinsky, Lea, Alexandra J. Scupham, Gianluca Delia Vedova, Zheng Liu, Andres Figueroa, Katechan Jampachaisri, Bei Yin, et al. "Section 3 update: Oligonucleotide Fingerprinting of Ribosomal RNA Genes (OFRG)." In Molecular Microbial Ecology Manual, 2471–87. Dordrecht: Springer Netherlands, 2008. http://dx.doi.org/10.1007/978-1-4020-2177-0_304.
Full textMathieu-Daudé, Françoise, Karen Evans, Frank Kullmann, Rhonda Honeycutt, Thomas Vogt, John Welsh, and Michael McClelland. "Applications of DNA and RNA Fingerprinting by the Arbitrarily Primed Polymerase Chain Reaction." In Bacterial Genomes, 414–36. Boston, MA: Springer US, 1998. http://dx.doi.org/10.1007/978-1-4615-6369-3_33.
Full textYacobi, Yacov. "Improved Boneh-Shaw Content Fingerprinting." In Topics in Cryptology — CT-RSA 2001, 378–91. Berlin, Heidelberg: Springer Berlin Heidelberg, 2001. http://dx.doi.org/10.1007/3-540-45353-9_28.
Full textGellert, Kai, Tibor Jager, Lin Lyu, and Tom Neuschulten. "On Fingerprinting Attacks and Length-Hiding Encryption." In Topics in Cryptology – CT-RSA 2022, 345–69. Cham: Springer International Publishing, 2022. http://dx.doi.org/10.1007/978-3-030-95312-6_15.
Full textFang, Zhenghan, Yong Chen, Dong Nie, Weili Lin, and Dinggang Shen. "RCA-U-Net: Residual Channel Attention U-Net for Fast Tissue Quantification in Magnetic Resonance Fingerprinting." In Lecture Notes in Computer Science, 101–9. Cham: Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-32248-9_12.
Full textConference papers on the topic "RNA fingerprinting"
Zou, Pengfei, Ang Li, Kevin Barker, and Rong Ge. "Fingerprinting Anomalous Computation with RNN for GPU-accelerated HPC Machines*." In 2019 IEEE International Symposium on Workload Characterization (IISWC). IEEE, 2019. http://dx.doi.org/10.1109/iiswc47752.2019.9042165.
Full textKromer-Edwards, Cory, Mariana Castanheira, and Suely Oliveira. "K-Mer Fingerprinting with RNN to predict MICs for K. pneumoniae." In 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, 2022. http://dx.doi.org/10.1109/bibm55620.2022.9995374.
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