Journal articles on the topic 'Ribosomal leaky scanning'
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Smirnova, Victoria V., Ekaterina D. Shestakova, Daria S. Nogina, Polina A. Mishchenko, Tatiana A. Prikazchikova, Timofei S. Zatsepin, Ivan V. Kulakovskiy, Ivan N. Shatsky, and Ilya M. Terenin. "Ribosomal leaky scanning through a translated uORF requires eIF4G2." Nucleic Acids Research 50, no. 2 (January 8, 2022): 1111–27. http://dx.doi.org/10.1093/nar/gkab1286.
Zhou, Weihui, and Weihong Song. "Leaky Scanning and Reinitiation Regulate BACE1 Gene Expression." Molecular and Cellular Biology 26, no. 9 (May 1, 2006): 3353–64. http://dx.doi.org/10.1128/mcb.26.9.3353-3364.2006.
Pisareva, Vera P., and Andrey V. Pisarev. "DHX29 reduces leaky scanning through an upstream AUG codon regardless of its nucleotide context." Nucleic Acids Research 44, no. 9 (April 11, 2016): 4252–65. http://dx.doi.org/10.1093/nar/gkw240.
Schneider, P. A., R. Kim, and W. I. Lipkin. "Evidence for translation of the Borna disease virus G protein by leaky ribosomal scanning and ribosomal reinitiation." Journal of virology 71, no. 7 (1997): 5614–19. http://dx.doi.org/10.1128/jvi.71.7.5614-5619.1997.
de Breyne, Sylvain, and Théophile Ohlmann. "Focus on Translation Initiation of the HIV-1 mRNAs." International Journal of Molecular Sciences 20, no. 1 (December 28, 2018): 101. http://dx.doi.org/10.3390/ijms20010101.
Liu, Q., and G. Hobom. "Evidence for translation of VP3 of avian polyomavirus BFDV by leaky ribosomal scanning." Archives of Virology 145, no. 2 (February 15, 2000): 407–16. http://dx.doi.org/10.1007/s007050050032.
Smith, E. "Leaky ribosomal scanning in mammalian genomes: significance of histone H4 alternative translation in vivo." Nucleic Acids Research 33, no. 4 (February 23, 2005): 1298–308. http://dx.doi.org/10.1093/nar/gki248.
Ferreira, Joshua P., William L. Noderer, Alexander J. Diaz de Arce, and Clifford L. Wang. "Engineering ribosomal leaky scanning and upstream open reading frames for precise control of protein translation." Bioengineered 5, no. 3 (January 14, 2014): 186–92. http://dx.doi.org/10.4161/bioe.27607.
Stacey, Simon N., Deborah Jordan, Andrew J. K. Williamson, Michael Brown, Joanna H. Coote, and John R. Arrand. "Leaky Scanning Is the Predominant Mechanism for Translation of Human Papillomavirus Type 16 E7 Oncoprotein from E6/E7 Bicistronic mRNA." Journal of Virology 74, no. 16 (August 15, 2000): 7284–97. http://dx.doi.org/10.1128/jvi.74.16.7284-7297.2000.
Latorre, Patrizia, Daniel Kolakofsky, and Joseph Curran. "Sendai Virus Y Proteins Are Initiated by a Ribosomal Shunt." Molecular and Cellular Biology 18, no. 9 (September 1, 1998): 5021–31. http://dx.doi.org/10.1128/mcb.18.9.5021.
Firth, Andrew E., and Ian Brierley. "Non-canonical translation in RNA viruses." Journal of General Virology 93, no. 7 (July 1, 2012): 1385–409. http://dx.doi.org/10.1099/vir.0.042499-0.
Kirshner, Jessica R., Katherine Staskus, Ashley Haase, Michael Lagunoff, and Don Ganem. "Expression of the Open Reading Frame 74 (G-Protein-Coupled Receptor) Gene of Kaposi’s Sarcoma (KS)-Associated Herpesvirus: Implications for KS Pathogenesis." Journal of Virology 73, no. 7 (July 1, 1999): 6006–14. http://dx.doi.org/10.1128/jvi.73.7.6006-6014.1999.
Levine, Corinna G., Devarati Mitra, Ajay Sharma, Carolyn L. Smith, and Ramanujan S. Hegde. "The Efficiency of Protein Compartmentalization into the Secretory Pathway." Molecular Biology of the Cell 16, no. 1 (January 2005): 279–91. http://dx.doi.org/10.1091/mbc.e04-06-0508.
Chenik, M., K. Chebli, and D. Blondel. "Translation initiation at alternate in-frame AUG codons in the rabies virus phosphoprotein mRNA is mediated by a ribosomal leaky scanning mechanism." Journal of virology 69, no. 2 (1995): 707–12. http://dx.doi.org/10.1128/jvi.69.2.707-712.1995.
Chatterji, Udayan, Aymeric de Parseval, and John H. Elder. "Feline Immunodeficiency Virus OrfA Is Distinct from Other Lentivirus Transactivators." Journal of Virology 76, no. 19 (October 1, 2002): 9624–34. http://dx.doi.org/10.1128/jvi.76.19.9624-9634.2002.
Lin, Ching-Gong, and Szecheng J. Lo. "Evidence for involvement of a ribosomal leaky scanning mechanism in the translation of the hepatitis B virus Pol gene from the viral pregenome RNA." Virology 188, no. 1 (May 1992): 342–52. http://dx.doi.org/10.1016/0042-6822(92)90763-f.
Singh, Chingakham Ranjit, Cynthia Curtis, Yasufumi Yamamoto, Nathan S. Hall, Dustin S. Kruse, Hui He, Ernest M. Hannig, and Katsura Asano. "Eukaryotic Translation Initiation Factor 5 Is Critical for Integrity of the Scanning Preinitiation Complex and Accurate Control of GCN4 Translation." Molecular and Cellular Biology 25, no. 13 (July 1, 2005): 5480–91. http://dx.doi.org/10.1128/mcb.25.13.5480-5491.2005.
Hinton, Tracey M., Feng Li, and Brendan S. Crabb. "Internal Ribosomal Entry Site-Mediated Translation Initiation in Equine Rhinitis A Virus: Similarities to and Differences from That of Foot-and-Mouth Disease Virus." Journal of Virology 74, no. 24 (December 15, 2000): 11708–16. http://dx.doi.org/10.1128/jvi.74.24.11708-11716.2000.
Kumar, Amod, Asaf V. N. Muhasin, Ashwin Ashok Raut, Richa Sood, and Anamika Mishra. "Identification of Chicken Pulmonary miRNAs Targeting PB1, PB1-F2, and N40 Genes of Highly Pathogenic Avian Influenza Virus H5N1 in Silico." Bioinformatics and Biology Insights 8 (January 2014): BBI.S14631. http://dx.doi.org/10.4137/bbi.s14631.
Hsieh, Ching-Chyuan, Wei Xiong, Qizhi Xie, Jeffrey P. Rabek, Sheen G. Scott, Mi Ra An, Peter D. Reisner, David T. Kuninger, and John Papaconstantinou. "Effects of Age on the Posttranscriptional Regulation of CCAAT/Enhancer Binding Protein α and CCAAT/Enhancer Binding Protein β Isoform Synthesis in Control and LPS-Treated Livers." Molecular Biology of the Cell 9, no. 6 (June 1998): 1479–94. http://dx.doi.org/10.1091/mbc.9.6.1479.
Tauber, Sandra, Yvonne Ligertwood, Marlynne Quigg-Nicol, Bernadette M. Dutia, and Richard M. Elliott. "Behaviour of influenza A viruses differentially expressing segment 2 gene products in vitro and in vivo." Journal of General Virology 93, no. 4 (April 1, 2012): 840–49. http://dx.doi.org/10.1099/vir.0.039966-0.
Hogan, Michael J., Nikita Maheshwari, Annalisa Nicastri, Nicola Ternette, and Laurence C. Eisenlohr. "Immunodominant, Qa-1-restricted CD8 T cell response elicited against a non-canonical translation product in influenza A virus." Journal of Immunology 206, no. 1_Supplement (May 1, 2021): 103.05. http://dx.doi.org/10.4049/jimmunol.206.supp.103.05.
Shestakova, Ekaterina D., Roman S. Tumbinsky, Dmitri E. Andreev, Fedor N. Rozov, Ivan N. Shatsky, and Ilya M. Terenin. "The Roles of eIF4G2 in Leaky Scanning and Reinitiation on the Human Dual-Coding POLG mRNA." International Journal of Molecular Sciences 24, no. 24 (December 5, 2023): 17149. http://dx.doi.org/10.3390/ijms242417149.
Matsuda, Daiki, Lisa Bauer, Kathryn Tinnesand, and Theo W. Dreher. "Expression of the Two Nested Overlapping Reading Frames of Turnip Yellow Mosaic Virus RNA Is Enhanced by a 5′ Cap and by 5′ and 3′ Viral Sequences." Journal of Virology 78, no. 17 (September 1, 2004): 9325–35. http://dx.doi.org/10.1128/jvi.78.17.9325-9335.2004.
Firth, Andrew E., Jessika C. Zevenhoven-Dobbe, Norma M. Wills, Yun Young Go, Udeni B. R. Balasuriya, John F. Atkins, Eric J. Snijder, and Clara C. Posthuma. "Discovery of a small arterivirus gene that overlaps the GP5 coding sequence and is important for virus production." Journal of General Virology 92, no. 5 (May 1, 2011): 1097–106. http://dx.doi.org/10.1099/vir.0.029264-0.
Andreev, D. E., P. V. Baranov, A. Milogorodskii, and D. Rachinskii. "A deterministic model for non-monotone relationship between translation of upstream and downstream open reading frames." Mathematical Medicine and Biology: A Journal of the IMA 38, no. 4 (October 29, 2021): 490–515. http://dx.doi.org/10.1093/imammb/dqab015.
Racine, Trina, Chris Barry, Kenneth Roy, Sandra J. Dawe, Maya Shmulevitz, and Roy Duncan. "Leaky Scanning and Scanning-independent Ribosome Migration on the Tricistronic S1 mRNA of Avian Reovirus." Journal of Biological Chemistry 282, no. 35 (June 29, 2007): 25613–22. http://dx.doi.org/10.1074/jbc.m703708200.
Sun, Tony, Yingpu Yu, Xianfang Wu, Ashley Acevedo, Ji-Dung Luo, Jiayi Wang, William M. Schneider, et al. "Decoupling expression and editing preferences of ADAR1 p150 and p110 isoforms." Proceedings of the National Academy of Sciences 118, no. 12 (March 15, 2021): e2021757118. http://dx.doi.org/10.1073/pnas.2021757118.
Schwartz, S., B. K. Felber, and G. N. Pavlakis. "Mechanism of translation of monocistronic and multicistronic human immunodeficiency virus type 1 mRNAs." Molecular and Cellular Biology 12, no. 1 (January 1992): 207–19. http://dx.doi.org/10.1128/mcb.12.1.207-219.1992.
Schwartz, S., B. K. Felber, and G. N. Pavlakis. "Mechanism of translation of monocistronic and multicistronic human immunodeficiency virus type 1 mRNAs." Molecular and Cellular Biology 12, no. 1 (January 1992): 207–19. http://dx.doi.org/10.1128/mcb.12.1.207.
Verchot, Jeanmarie, Susan M. Angell, and David C. Baulcombe. "In Vivo Translation of the Triple Gene Block of Potato Virus X Requires Two Subgenomic mRNAs." Journal of Virology 72, no. 10 (October 1, 1998): 8316–20. http://dx.doi.org/10.1128/jvi.72.10.8316-8320.1998.
Frederiks, Floor, Guus J. J. E. Heynen, Sjoerd J. van Deventer, Hans Janssen, and Fred van Leeuwen. "Two Dot1 isoforms in Saccharomyces cerevisiae as a result of leaky scanning by the ribosome." Nucleic Acids Research 37, no. 21 (September 24, 2009): 7047–58. http://dx.doi.org/10.1093/nar/gkp765.
Wamboldt, Yashitola, Saleem Mohammed, Christian Elowsky, Chris Wittgren, Wilson B. M. de Paula, and Sally A. Mackenzie. "Participation of Leaky Ribosome Scanning in Protein Dual Targeting by Alternative Translation Initiation in Higher Plants." Plant Cell 21, no. 1 (January 2009): 157–67. http://dx.doi.org/10.1105/tpc.108.063644.
Anderson, Jenny L., Adam T. Johnson, Jane L. Howard, and Damian F. J. Purcell. "Both Linear and Discontinuous Ribosome Scanning Are Used for Translation Initiation from Bicistronic Human Immunodeficiency Virus Type 1 env mRNAs." Journal of Virology 81, no. 9 (February 28, 2007): 4664–76. http://dx.doi.org/10.1128/jvi.01028-06.
Sears, R. C., and L. Sealy. "Multiple forms of C/EBP beta bind the EFII enhancer sequence in the Rous sarcoma virus long terminal repeat." Molecular and Cellular Biology 14, no. 7 (July 1994): 4855–71. http://dx.doi.org/10.1128/mcb.14.7.4855-4871.1994.
Sears, R. C., and L. Sealy. "Multiple forms of C/EBP beta bind the EFII enhancer sequence in the Rous sarcoma virus long terminal repeat." Molecular and Cellular Biology 14, no. 7 (July 1994): 4855–71. http://dx.doi.org/10.1128/mcb.14.7.4855.
Racine, T., and R. Duncan. "Facilitated leaky scanning and atypical ribosome shunting direct downstream translation initiation on the tricistronic S1 mRNA of avian reovirus." Nucleic Acids Research 38, no. 20 (July 7, 2010): 7260–72. http://dx.doi.org/10.1093/nar/gkq611.
Carroll, R., and D. Derse. "Translation of equine infectious anemia virus bicistronic tat-rev mRNA requires leaky ribosome scanning of the tat CTG initiation codon." Journal of Virology 67, no. 3 (1993): 1433–40. http://dx.doi.org/10.1128/jvi.67.3.1433-1440.1993.
Schaecher, Scott R., Jason M. Mackenzie, and Andrew Pekosz. "The ORF7b Protein of Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) Is Expressed in Virus-Infected Cells and Incorporated into SARS-CoV Particles." Journal of Virology 81, no. 2 (November 1, 2006): 718–31. http://dx.doi.org/10.1128/jvi.01691-06.
Zajakina, Anna, Tatyana Kozlovska, Ruta Bruvere, Jekaterina Aleksejeva, Paul Pumpens, and Henrik Garoff. "Translation of hepatitis B virus (HBV) surface proteins from the HBV pregenome and precore RNAs in Semliki Forest virus-driven expression." Journal of General Virology 85, no. 11 (November 1, 2004): 3343–51. http://dx.doi.org/10.1099/vir.0.80388-0.
Lin, Changyi A., Steven R. Ellis, and Heather L. True. "The Sua5 Protein Is Essential for Normal Translational Regulation in Yeast." Molecular and Cellular Biology 30, no. 1 (November 2, 2009): 354–63. http://dx.doi.org/10.1128/mcb.00754-09.
Wu, Yang, Zengpeng Han, Mingzhu Duan, Liangyu Jiang, Tiantian Tian, Dingyu Jin, Qitian Wang, and Fuqiang Xu. "Popularizing Recombinant Baculovirus-derived OneBac System for Laboratory Production of all Recombinant Adeno-associated Virus Vector Serotypes." Current Gene Therapy 21, no. 2 (April 19, 2021): 167–76. http://dx.doi.org/10.2174/1566523221666210118111657.
Haimov, Ora, Urmila Sehrawat, Ana Tamarkin-Ben Harush, Anat Bahat, Anna Uzonyi, Alexander Will, Hiroyuki Hiraishi, Katsura Asano, and Rivka Dikstein. "Dynamic Interaction of Eukaryotic Initiation Factor 4G1 (eIF4G1) with eIF4E and eIF1 Underlies Scanning-Dependent and -Independent Translation." Molecular and Cellular Biology 38, no. 18 (July 9, 2018). http://dx.doi.org/10.1128/mcb.00139-18.
Havkin-Solomon, Tal, Elad Itzhaki, Nir Joffe, Nina Reuven, Yosef Shaul, and Rivka Dikstein. "Selective translational control of cellular and viral mRNAs by RPS3 mRNA binding." Nucleic Acids Research, April 18, 2023. http://dx.doi.org/10.1093/nar/gkad269.
Ghosh, Sayan, Haitao Liu, Meysam Yazdankhah, Nadezda Stepicheva, Peng Shang, Tanuja Vaidya, Stacey Hose, et al. "βA1-crystallin regulates glucose metabolism and mitochondrial function in mouse retinal astrocytes by modulating PTP1B activity." Communications Biology 4, no. 1 (February 24, 2021). http://dx.doi.org/10.1038/s42003-021-01763-5.
Kim, Myung-Hwi, Boram Choi, Seok-Yeong Jang, Ji-Soo Choi, Sora Kim, Yubin Lee, Suejin Park, Sun-Jung Kwon, Jin-Ho Kang, and Jang-Kyun Seo. "The VP53 protein encoded by RNA2 of a fabavirus, broad bean wilt virus 2, is essential for viral systemic infection." Communications Biology 7, no. 1 (April 16, 2024). http://dx.doi.org/10.1038/s42003-024-06170-0.
David, Maya, Tsviya Olender, Orel Mizrahi, Shira Weingarten-Gabbay, Gilgi Friedlander, Sara Meril, Nadav Goldberg, et al. "DAP5 drives translation of specific mRNA targets with upstream ORFs in human embryonic stem cells." RNA, August 12, 2022, rna.079194.122. http://dx.doi.org/10.1261/rna.079194.122.
Yeckes, Alyson R., Aaron R. Victor, Zheng Zhu, Meena Narayanan, Bharani Srinivasan, Bethany Bruce, and Jonathan Kaye. "The Tox Gene Encodes Two Proteins with Distinct and Shared Roles in Gene Regulation." Journal of Immunology, April 28, 2023. http://dx.doi.org/10.4049/jimmunol.2200659.
Bohlen, Jonathan, Mykola Roiuk, Marilena Neff, and Aurelio A. Teleman. "PRRC2 proteins impact translation initiation by promoting leaky scanning." Nucleic Acids Research, March 3, 2023. http://dx.doi.org/10.1093/nar/gkad135.
Shestakova, Ekaterina D., Victoria V. Smirnova, Ivan N. Shatsky, and Ilya M. Terenin. "Specific Mechanisms of Translation Initiation in Higher Eukaryotes: The eIF4G2 Story." RNA, December 14, 2022, rna.079462.122. http://dx.doi.org/10.1261/rna.079462.122.