Academic literature on the topic 'QSPkR'
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Journal articles on the topic "QSPkR"
Zhivkova, Zvetanka. "QUANTITATIVE STRUCTURE–PHARMACOKINETICS RELATIONSHIP FOR PLASMA PROTEIN BINDING OF NEUTRAL DRUGS." International Journal of Pharmacy and Pharmaceutical Sciences 10, no. 4 (April 1, 2018): 88. http://dx.doi.org/10.22159/ijpps.2018v10i4.24612.
Full textZhivkova, Zvetanka. "QUANTITATIVE STRUCTURE–PHARMACOKINETICS MODELING OF THE UNBOUND CLEARANCE FOR NEUTRAL DRUGS." International Journal of Current Pharmaceutical Research 10, no. 2 (March 15, 2018): 56. http://dx.doi.org/10.22159/ijcpr.2018v10i2.25849.
Full textMorris, Marilyn E., Xinning Yang, Yash A. Gandhi, Suraj G. Bhansali, and Lisa J. Benincosa. "Interspecies scaling: prediction of human biliary clearance and comparison with QSPKR." Biopharmaceutics & Drug Disposition 33, no. 1 (January 2012): 1–14. http://dx.doi.org/10.1002/bdd.1761.
Full textZhivkova, Zvetanka Dobreva. "Quantitative Structure – Pharmacokinetics Relationships for Plasma Protein Binding of Basic Drugs." Journal of Pharmacy & Pharmaceutical Sciences 20, no. 1 (September 14, 2017): 349. http://dx.doi.org/10.18433/j33633.
Full textZhivkova, Zvetanka Dobreva, Tsvetelina Mandova, and Irini Doytchinova. "Quantitative Structure – Pharmacokinetics Relationships Analysis of Basic Drugs: Volume of Distribution." Journal of Pharmacy & Pharmaceutical Sciences 18, no. 3 (October 12, 2015): 515. http://dx.doi.org/10.18433/j3xc7s.
Full textvan der Graaf, Pieter H., Jonas Nilsson, Erno A. van Schaick, and Meindert Danhof. "Multivariate Quantitative Structure–Pharmacokinetic Relationships (QSPKR) Analysis of Adenosine A1 Receptor Agonists in rat." Journal of Pharmaceutical Sciences 88, no. 3 (March 1999): 306–12. http://dx.doi.org/10.1021/js980294a.
Full textDurairaj, Chandrasekar, Jaymin C. Shah, Shruti Senapati, and Uday B. Kompella. "Prediction of Vitreal Half-Life Based on Drug Physicochemical Properties: Quantitative Structure–Pharmacokinetic Relationships (QSPKR)." Pharmaceutical Research 26, no. 5 (October 8, 2008): 1236–60. http://dx.doi.org/10.1007/s11095-008-9728-7.
Full textLouis, Bruno, and Vijay K. Agrawal. "Quantitative structure-pharmacokinetic relationship (QSPkP) analysis of the volume of distribution values of anti-infective agents from j group of the ATC classification in humans." Acta Pharmaceutica 62, no. 3 (September 1, 2012): 305–23. http://dx.doi.org/10.2478/v10007-012-0024-z.
Full textZhivkova, Zvetanka Dobreva. "Quantitative Structure – Pharmacokinetic Relationships for Plasma Clearance of Basic Drugs with Consideration of the Major Elimination Pathway." Journal of Pharmacy & Pharmaceutical Sciences 20 (May 29, 2017): 135. http://dx.doi.org/10.18433/j3mg71.
Full textHoney, Suresh Thareja, Manoj Kumar, and V. R. Sinha. "Self-organizing molecular field analysis of NSAIDs: Assessment of pharmacokinetic and physicochemical properties using 3D-QSPkR approach." European Journal of Medicinal Chemistry 53 (July 2012): 76–82. http://dx.doi.org/10.1016/j.ejmech.2012.03.037.
Full textDissertations / Theses on the topic "QSPkR"
Gottipati, Gopichand. "PREDICTION OF HUMAN SYSTEMIC, BIOLOGICALLY RELEVANT PHARMACOKINETIC (PK) PROPERTIES USING QUANTITATIVE STRUCTURE PHARMACOKINETIC RELATIONSHIPS (QSPKR) AND INTERSPECIES PHARMACOKINETIC ALLOMETRIC SCALING (PK-AS) APPROACHES FOR FOUR DIFFERENT PHARMACOLOGICAL CLASSES OF COMPOUNDS." VCU Scholars Compass, 2014. http://scholarscompass.vcu.edu/etd/3525.
Full textTurner, Joseph Vernon. "Application of Artificial Neural Networks in Pharmacokinetics." Thesis, The University of Sydney, 2003. http://hdl.handle.net/2123/488.
Full textTurner, Joseph Vernon. "Application of Artificial Neural Networks in Pharmacokinetics." University of Sydney, 2003. http://hdl.handle.net/2123/488.
Full textDavor, Lončar. "Definisanje lipofilnosti, farmakokinetičkih parametara i antikancerogenog potencijala novosintetisane serije stiril laktona." Phd thesis, Univerzitet u Novom Sadu, Tehnološki fakultet Novi Sad, 2018. https://www.cris.uns.ac.rs/record.jsf?recordId=107622&source=NDLTD&language=en.
Full textThe behavior and the chromatographic lipophilicity natural styryl lactone 7-(+)-goniofufurone, 7-epi-(+)-goniofufurone, crassalactones B and C and twenty of their newlysynthesized derivatives and analogs were examined using reverse-phase high performance liquid chromatography in the two solvent systems. In previous studies it has been shown that these compounds have great biological potential toward several human tumor cell lines. Chromatographic behavior of the compounds is generally in accordance with their structure. The relationships between the chromatographic retention constants and the majority of their in silico lipophilicity parameters are linear. The application of chemometric QSRR analysis determined very good multiple linear regression predictive models of quantitative correlation between experimentally obtained chromatographic retention constant, which determines the retention of the compound in pure water and in silico molecular descriptors, i.e. the structure of the compound. The lipophilicity of the compounds has a major influence on their pharmacokinetics, i.e. ADME (absorption, distribution, metabolism, elimination) properties. The best multi-linear regression models depending on the pharmacokinetic parameters of styryl lactone and other molecular descriptors have been defined and statistically validated. In vitro cytotoxic activity of the compounds was evaluated according to four novel human malignant cell lines: prostate cancer (PC3), colon cancer (HT-29), melanoma (Hs294T), lung adenocarcinom (A549). The most active compound was tricyclic 4-fluorocinnamic analog, which exhibits a nanomolar activity (IC50 2,1 nM) toward melanoma cells. This compound is over 2250 times more active than commercial antitumor agent doxorubicin (DOX). SAR analysis has revealed a correlation between the structure and the biological activity of the compounds. Using the molecular docking the relationship of the styryl lactone and the target protein important for prostate cancer was examined. The compounds with high inhibitory activity against prostate cancer cells have a high docking score and are capable to form a coordinative-covalent bond with a Fe2+ ion present in the active centre of the enzyme. 3DQSAR analysis, which was performed by methods of comparative CoMFA and CoMSIA fields, has formed a good predictive model between chemical structure and biological activity of the styryl lactone.
Al, Tafif Abdullah. "PREDICTION OF HUMAN SYSTEMIC, BIOLOGICALLY RELEVANT PHARMACOKINETIC PROPERTIES BASED ON PHYSICOCHEMICAL PROPERTIES OF CALCIUM CHANNEL BLOCKERS." VCU Scholars Compass, 2012. http://scholarscompass.vcu.edu/etd/2868.
Full textBadri, Prajakta. "PREDICTION OF HUMAN SYSTEMIC, BIOLOGICALLY RELEVANT PHARMACOKINETIC (PK) PROPERTIES BASED ON QUANTITATIVE STRUCTURE PHARMACOKINETIC RELATIONSHIPS (QSPKR) AND INTERSPECIES PHARMACOKINETIC ALLOMETRIC SCALING (PK-AS)." VCU Scholars Compass, 2010. http://scholarscompass.vcu.edu/etd/124.
Full textTämm, Kaido. "QSPR modeling of some properties of organic compounds /." Online version, 2006. http://dspace.utlib.ee/dspace/bitstream/10062/475/5/tammkaido.pdf.
Full textAl-Fahemi, Jabir Hamad. "Momentum-space descriptors for QSPR and QSAR studies." Thesis, University of Liverpool, 2006. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.439465.
Full textEspinosa, Porragas Gabriela. "Modelos QSPR/QSAR/QSTR basados en sistemas neuronales cognitivos." Doctoral thesis, Universitat Rovira i Virgili, 2002. http://hdl.handle.net/10803/8505.
Full textLas redes neuronales (ANN) constituyen una alternativa para el desarrollo de algoritmos predictivos aplicados en diversos campos como: análisis masivo de bases de datos, para subsanar los obstáculos derivados de la selección o la multicolinealidad de variables, así como la sensibilidad de los modelos a la presencia de ruido en los datos de entrada al sistema neuronal. En la mayoría de los casos, las redes neuronales han dado mejores resultados que los métodos de regresión multilineal (MLR), el análisis de componentes principales (PCA), o los métodos de mínimos cuadrados parciales (PLS) debido a la no linealidad inherente en los modelos de redes.
En los últimos años el interés por los modelos QSPR/QSAR basados en redes neuronales se ha incrementado. La principal ventaja de los modelos de redes recae en el hecho que un modelo QSAR/QSPR puede desarrollarse sin especificar a priori la forma analítica del modelo. Las redes neuronales son especialmente útiles para establecer las complejas relaciones existentes entre la salida del modelo (propiedades físico químicas o biológicas) y la entrada del modelo (descriptores moleculares). Además, permiten clasificar los compuestos de acuerdo a sus descriptores moleculares y usar esta información para seleccionar el conjunto de índices capaz de caracterizar mejor al conjunto de moléculas. Los modelos QSPR basados en redes usan principalmente algoritmos del tipo backpropagation. Backpropagation es un sistema basado en un aprendizaje por minimización del error. Sin embargo, ya que los compuestos químicos pueden clasificarse en grupos de acuerdo a su similitud molecular, es factible usar un clasificador cognitivo como fuzzy ARTMAP para crear una representación simultánea de la estructura y de la propiedad objetivo. Este tipo de sistema cognitivo usa un aprendizaje competitivo, en el cual hay una activa búsqueda de la categoría o la hipótesis cuyos prototipos provean una mejor representación de los datos de entrada (estructura química).
En el presente trabajo se propone y se estudia una metodología que integra dos sistemas cognitivos SOM y fuzzy ARTMAP para obtener modelos QSAR/QSPR. Los modelos estiman diferentes propiedades como las temperaturas de transición de fase (temperatura de ebullición, temperatura de fusión) y propiedades críticas (temperatura y presión), así como la actividad biológica de compuestos orgánicos diversos (indicadores de toxicidad). Dentro de este contexto, se comparan la selección de variables realizados por métodos tradicionales (PCA, o métodos combinatorios) con la realizada usando mapas auto-organizados (SOM).
El conjunto de descriptores moleculares más factible se obtiene escogiendo un representante de cada categoría de índices, en particular aquel índice con la correlación más alta con respecto a la propiedad objetivo. El proceso continúa añadiendo índices en orden decreciente de correlación. Este proceso concluye cuando una medida de disimilitud entre mapas para los diferentes conjuntos de descriptores alcanza un valor mínimo, lo cual indica que el añadir descriptores adicionales no provee información complementaria a la clasificación de los compuestos estudiados. El conjunto de descriptores seleccionados se usa como vector de entrada a la red fuzzy ARTMAP modificada para poder predecir.
Los modelos propuestos QSPR/QSAR para predecir propiedades tanto físico químicas como actividades biológicas predice mejor que los modelos obtenidos con métodos como backpropagation o métodos de contribución de grupos en los casos en los que se apliquen dichos métodos.
One of the most attractive applications of computer-aided techniques in molecular modeling stands on the possibility of assessing certain molecular properties before the molecule is synthesized. The field of Quantitative Structure Activity/Property Relationships (QSAR/QSPR) has demonstrated that the biological activity and the physical properties of a set of compounds can be mathematically related to some "simple" molecular structure parameters.
Artificial neural network (ANN) approaches provide an alternative to established predictive algorithms for analyzing massive chemical databases, potentially overcoming obstacles arising from variable selection, multicollinearity, specification of important parameters, and sensitivy to erroneous values. In most instances, ANN's have proven to be better than MLR, PCA or PLS because of their ability to handle non-linear associations.
In the last years there has been a growing interest in the application of neural networks to the development of QSAR/QSPR. The mayor advantage of ANN lies in the fact QSAR/QSPR can be developed without having to a priori specify an analytical form for the correlation model. The NN approach is especially suited for mapping complex non-linear relationships that exists between model output (physicochemical or biological properties) and input model (molecular descriptors). The NN approach could also be used to classify chemicals according to their chemical descriptors and used this information to select the most suitable indices capable of characterize the set of molecules. Existing neural networks based QSAR/QSPR for estimating properties of chemicals have relied primarily on backpropagation architecture. Backpropagation are an error based learning system in which adaptive weights are dynamically revised so as to minimize estimation errors of target values. However, since chemical compounds can be classified into various structural categories, it is also feasible to use cognitive classifiers such as fuzzy ARTMAP cognitive system, for unsupervised learning of categories, which represent structure and properties simultaneously. This class of neural networks uses a match-based learning, in that it actively searches for recognition categories or hypotheses whose prototype provides an acceptable match to input data.
The current study have been proposed a new QSAR/QSPR fuzzy ARTMAP neural network based models for predicting diverse physical properties such as phase transition temperatures (boiling and melting points) and critical properties (temperature and pressure) and the biological activities (toxicity indicators) of diverse set of compounds. In addition, traditional pre-screening methods to determine de minimum set of inputs parameters have been compared with novel methodology based in self organized maps algorithms.
The most suitable set of molecular descriptor was obtained by choosing a representative from each cluster, in particular the index that presented the highest correlation with the target variable, and additional indices afterwards in order of decreasing correlation. The selection process ended when a dissimilarity measure between the maps for the different sets of descriptors reached a minimum valued, indicating that the inclusion of more descriptors did not add supplementary information. The optimal subset of descriptors was finally used as input to a fuzzy ARTMAP architecture modified to effect predictive capabilities.
The proposed QSPR/QSAR model predicted physicochemical or biological activities significantly better than backpropagation neural networks or traditional approaches such as group contribution methods when they applied.
Aguado, Ullate Sonia. "Modeling of homogeneous catalysis: from dft to qspr approaches." Doctoral thesis, Universitat Rovira i Virgili, 2012. http://hdl.handle.net/10803/79119.
Full textCatalysis is a field of science that explores solutions to environmental problems such as pollution, elimination of waste generated in the process of materials synthesis or regeneration of natural resources. In the present Thesis, we have reported a DFT study on the N-H σ-bond activation of ammonia by the µ3-alkylidyne titanium species using the [{Ti(η5-C5H5)(µ-O)}3(µ3-CH)] model complex. Afterwards, we have combined the TS-based approach and qualitative analysis through a newly defined molecular descriptor (distance-weighted volume, VW), in order to analyze the asymmetric hydroformylation of styrene catalyzed by Rh-binaphos complexes. Using our previous mechanistic knowledge, we have presented a QSPR study to predict the activity and the enantioselectivity in the hydroformylation of styrene catalyzed by Rh-diphosphane complexes. We have also developed a new methodology to predict enantioselectivity based on the quantitative quadrant-diagram representation of the catalysts and 3D-QSSR modeling; and we have applied it in the asymmetric cyclopropanation of alkenes catalyzed by copper complexes.
Books on the topic "QSPkR"
Roy, Kunal, Supratik Kar, and Rudra Narayan Das. A Primer on QSAR/QSPR Modeling. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17281-1.
Full textDehmer, Matthias, Kurt Varmuza, and Danail Bonchev, eds. Statistical Modelling of Molecular Descriptors in QSAR/QSPR. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA, 2012. http://dx.doi.org/10.1002/9783527645121.
Full textV, Diudea Mircea, ed. QSPR/QSAR studies by molecular descriptors. Huntington, N.Y: Nova Science Publishers, 2001.
Find full textDiudea, Mircea V. QSPR / QSAR Studies by Molecular Descriptors. Nova Science Publishers, 2001.
Find full textRoy, Kunal, Supratik Kar, and Rudra Narayan Das. Primer on QSAR/QSPR Modeling: Fundamental Concepts. Springer, 2015.
Find full text(Editor), James Devillers, and Alexandru T. Balaban (Editor), eds. Topological Indices and Related Descriptors in QSAR and QSPAR. CRC, 2000.
Find full textBonchev, Danail, Frank Emmert-Streib, Matthias Dehmer, and Kurt Varmuza. Statistical Modelling of Molecular Descriptors in QSAR/QSPR. Wiley & Sons, Incorporated, John, 2012.
Find full textBonchev, Danail, Frank Emmert-Streib, Matthias Dehmer, and Kurt Varmuza. Statistical Modelling of Molecular Descriptors in QSAR/QSPR. Wiley & Sons, Incorporated, John, 2012.
Find full textDickenson, Eric. Evaluation of QSPR Techniques for Wastewater Treatment Processes. IWA Publishing, 2010.
Find full textBonchev, Danail, Frank Emmert-Streib, Matthias Dehmer, and Kurt Varmuza. Statistical Modelling of Molecular Descriptors in QSAR/QSPR. Wiley & Sons, Incorporated, John, 2012.
Find full textBook chapters on the topic "QSPkR"
Sippl, Wolfgang, and Dina Robaa. "QSAR/QSPR." In Applied Chemoinformatics, 9–52. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA, 2018. http://dx.doi.org/10.1002/9783527806539.ch2.
Full textRoy, Kunal, Supratik Kar, and Rudra Narayan Das. "QSAR/QSPR Methods." In SpringerBriefs in Molecular Science, 61–103. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17281-1_3.
Full textGolbraikh, Alexander, and Alexander Tropsha. "QSAR/QSPR Revisited." In Chemoinformatics, 465–95. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA, 2018. http://dx.doi.org/10.1002/9783527816880.ch12.
Full textRoy, Kunal, Supratik Kar, and Rudra Narayan Das. "QSAR/QSPR Modeling: Introduction." In SpringerBriefs in Molecular Science, 1–36. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17281-1_1.
Full textRoy, Kunal, Supratik Kar, and Rudra Narayan Das. "Statistical Methods in QSAR/QSPR." In SpringerBriefs in Molecular Science, 37–59. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17281-1_2.
Full textRoy, Kunal, Supratik Kar, and Rudra Narayan Das. "Newer Directions in QSAR/QSPR." In SpringerBriefs in Molecular Science, 105–21. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17281-1_4.
Full textRuby-Figueroa, René. "Quantitative Structure-Property Relationships (QSPR)." In Encyclopedia of Membranes, 1705–6. Berlin, Heidelberg: Springer Berlin Heidelberg, 2016. http://dx.doi.org/10.1007/978-3-662-44324-8_2001.
Full textSolov'ev, Vitaly, and Alexandre Varnek. "QSPR Models on Fragment Descriptors." In Tutorials in Chemoinformatics, 135–62. Chichester, UK: John Wiley & Sons, Ltd, 2017. http://dx.doi.org/10.1002/9781119161110.ch9.
Full textRuby-Figueroa, René. "Quantitative Structure-Property Relationships (QSPR)." In Encyclopedia of Membranes, 1–2. Berlin, Heidelberg: Springer Berlin Heidelberg, 2015. http://dx.doi.org/10.1007/978-3-642-40872-4_2001-1.
Full textTalevi, Alan. "In Silico ADME: QSPR/QSAR." In The ADME Encyclopedia, 525–31. Cham: Springer International Publishing, 2022. http://dx.doi.org/10.1007/978-3-030-84860-6_149.
Full textConference papers on the topic "QSPkR"
Duprat, A., J. L. Ploix, F. Dioury, and G. Dreyfus. "Toward big data in QSAR/QSPR." In 2014 IEEE 24th International Workshop on Machine Learning for Signal Processing (MLSP). IEEE, 2014. http://dx.doi.org/10.1109/mlsp.2014.6958884.
Full textMirajkar, K. G., A. V. Deshpande, and H. H. Budihal. "QSPR analysis of KCD coindices for some Chemical compounds." In INTERNATIONAL CONFERENCE ON ADVANCES IN MATERIALS, COMPUTING AND COMMUNICATION TECHNOLOGIES: (ICAMCCT 2021). AIP Publishing, 2022. http://dx.doi.org/10.1063/5.0070749.
Full textMirajkar, K. G., A. Morajkar, and H. H. Budihal. "QSPR analysis of some chemical structures using KCD indices." In INTERNATIONAL CONFERENCE ON ADVANCES IN MATERIALS, COMPUTING AND COMMUNICATION TECHNOLOGIES: (ICAMCCT 2021). AIP Publishing, 2022. http://dx.doi.org/10.1063/5.0070746.
Full textSkvortsova, M. I., I. I. Baskin, V. A. Palyulin, O. L. Slovokhotova, and N. S. Zefirov. "Structural design inverse problems for topological indices in QSAR/QSPR studies." In The first European conference on computational chemistry (E.C.C.C.1). AIP, 1995. http://dx.doi.org/10.1063/1.47751.
Full textOukhemanou, F., A. Maldonado, P. Moreau, and B. Creton. "Application of Quantitative Structure-property Relationship (QSPR) Method for Chemical EOR." In IOR 2013 - 17th European Symposium on Improved Oil Recovery. Netherlands: EAGE Publications BV, 2013. http://dx.doi.org/10.3997/2214-4609.20142620.
Full textLaghridat, Charifa, Ilham Mounir, and Mohamed Essalih. "Understanding changes in the structure of complex networks using QSAR/QSPR." In 2022 11th International Symposium on Signal, Image, Video and Communications (ISIVC). IEEE, 2022. http://dx.doi.org/10.1109/isivc54825.2022.9800741.
Full textJack, Kevin, Heping Liu, Idriss Blakey, David Hill, Wang Yueh, Heidi Cao, Michael Leeson, Greg Denbeaux, Justin Waterman, and Andrew Whittaker. "The rational design of polymeric EUV resist materials by QSPR modelling." In Advanced Lithography, edited by Qinghuang Lin. SPIE, 2007. http://dx.doi.org/10.1117/12.716213.
Full textVladimirova, Nadezhda, Julia Ashina, and Dmitry Kirsanov. "QSPR Modelling of Potentiometric HCO3−/Cl− Selectivity for Polymeric Membrane Sensors." In CSAC2021. Basel Switzerland: MDPI, 2021. http://dx.doi.org/10.3390/csac2021-10621.
Full textDavronov, Rifkat, Bakhtiyor Rasulev, and Fatima Adilova. "Mathematical modeling of refractive index based on machine learning (kNN-QSPR) method." In 2020 IEEE 14th International Conference on Application of Information and Communication Technologies (AICT). IEEE, 2020. http://dx.doi.org/10.1109/aict50176.2020.9368648.
Full textPham-The, Hai, Huong Le-Thi-Thu, Teresa Garrigues, Marival Bermejo, Isabel González-Álvarez, and Miguel Cabrera-Pérez. "Towards computational prediction of Biopharmaceutics Classification System: a QSPR approach." In MOL2NET, International Conference on Multidisciplinary Sciences. Basel, Switzerland: MDPI, 2015. http://dx.doi.org/10.3390/mol2net-1-b008.
Full textReports on the topic "QSPkR"
Mills, Jeffrey D. IL QC QSPR - Preliminary Results. Fort Belvoir, VA: Defense Technical Information Center, February 2004. http://dx.doi.org/10.21236/ada422511.
Full textKatritzky, Alan R. Detoxification of Military Wastes by Nearcritical and Supercritical Water and QSPR Investigations. Fort Belvoir, VA: Defense Technical Information Center, September 1998. http://dx.doi.org/10.21236/ada357837.
Full textLeszczynski, Jerzy. Development of efficient solar cells using combination of QSPR and DFT approaches. Office of Scientific and Technical Information (OSTI), May 2021. http://dx.doi.org/10.2172/1785077.
Full text