Journal articles: 'Publication license'

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Simpson, Zach, and Peter Looker. "Introduction to the special issue." Scholarship of Teaching and Learning in the South 2, no. 1 (April 24, 2018): 1. http://dx.doi.org/10.36615/sotls.v2i1.52.

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Dr Zach Simpson and Prof Peter Looker, the editors of this second, special issue of SOTL in the South, contextualise the papers in the issue in relationship to one another. These articles were select for double-blind peer-review and publication after being presented at the SOTL in the South conference in July 2017 in Johannesburg, South Africa. How to cite this editorial: SIMPSON, Zach; LOOKER, Peter. Editorial: introduction to the special issue. Scholarship of Teaching and Learning in the South. v. 2, n. 1, p. 1-3, Apr. 2018. Available at: http://sotl-south-journal.net/?journal=sotls&page=article&op=view&path%5B%5D=52 This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

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Hossain, Arif. "Basic Concept of Intellectual property Rights (IPRs)." Bangladesh Journal of Bioethics 9, no. 1 (July 3, 2018): 24–28. http://dx.doi.org/10.3329/bioethics.v9i1.37219.

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Intellectual property Rights (IPRs) is protected by different systems of laws. Journals must choose a definitive form of systems. Some Blackwell journals use copyright system and some Blackwell use license from authors. Now a days online journals are using creative common licenses. Under creative common license journals are open access, allowed to download, copy, distribute, and display derivative works with proper attribution to author or owner for noncommercial purpose at a free cost. Education on IPRs will support to comprehend ones rights, professional code of conduct and the doctrine of "fair use" in publication. One cannot do anything with once writing. Researchers, academic, editors and readers must have the basic knowledge on who owns the rights in a publication and what users can do with the publication by law.

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Lyseng-Williamson, Katherine A. "Correction to: Glucagon-Like Peptide-1 Receptor Agonists in Type 2 Diabetes: Their Use and Differential Features." Clinical Drug Investigation 39, no. 10 (September 12, 2019): 1019. http://dx.doi.org/10.1007/s40261-019-00852-y.

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The article Glucagon-Like Peptide-1 Receptor Agonists in Type 2 Diabetes: Their Use and Differential Features, written by KA Lyseng-Williamson, was originally published Online First without open access. After publication in volume 39, issue 8, pages 805-819, Springer Healthcare IME requested that the article be Open Choice to make the article an open access publication. Post-publication open access was funded by an independent educational grant from Novo Nordisk A/S . The article is forthwith distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/), which permits any noncommercial use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license and indicate if changes were made.

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ZHANG, ZHI-QIANG. "Opening the door to electronic publication of zoological nomenclature and taxonomy." Zootaxa 1908, no. 1 (October 17, 2008): 68. http://dx.doi.org/10.11646/zootaxa.1908.1.6.

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On pages 57–67 of this issue of Zootaxa we publish a notice entitled “Proposed amendment of the International Code of Zoological Nomenclature to expand and refine methods of publication” by the International Commission on Zoological Nomenclature (ICZN 2008). We publish this notice under the “Creative Commons Attribution License” (for information about this license, see http://creativecommons.org/licenses/by/3.0/) to make it freely available online for everyone to read, download, copy, distribute, and use (with attribution). Zootaxa is now the most important journal in zoological taxonomy with the largest base of editors and authors (over 5000) and the highest rate of online access use. It is opportune for Zootaxa to help publicise this important notice by ICZN so that it reaches the widest readership possible.

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Gish, Robert G., Syed Abdul Basit, John Ryan, Altaf Dawood, and Ulrike Protzer. "Correction to: Hepatitis B Core Antibody: Role in Clinical Practice in 2020." Current Hepatology Reports 19, no. 4 (October 7, 2020): 499. http://dx.doi.org/10.1007/s11901-020-00544-8.

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The article “Hepatitis B Core Antibody: Role in Clinical Practice in 2020,” written by Robert G. Gish, Syed Abdul Basit, John Ryan, Altaf Dawood, and Ulrike Protzer, was originally published Online First without Open Access. After publication in volume 19, issue 3, pages 254–265, the author decided to opt for Open Choice and to make the article an Open Access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020, and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution, and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons License, and indicate if changes were made. The images or other third party materials in this article are included in the article’s Creative Commons License, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons License and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Haier, Jörg, Jonathan Sleeman, and Jürgen Schäfers. "Correction to: Assessment of incentivizing effects for cancer care frameworks." Clinical & Experimental Metastasis 38, no. 4 (June 28, 2021): 429. http://dx.doi.org/10.1007/s10585-021-10107-w.

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The article “Assessment of incentivizing effects for cancer care frameworks”, written by Jörg Haier, Jonathan Sleeman and Jürgen Schäfers, was originally published Online First without Open Access. After publication in volume 37, issue 4, page 447–450 the author decided to opt for Open Choice and to make the article an Open Access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0. Open access funding enabled and organized by Projekt DEAL.

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Lutz, Wolfgang, Brian Schwartz, Juan Martín Gómez Penedo, Kaitlyn Boyle, and Anne‑Katharina Deisenhofer. "Correction to: Working Towards the Development and Implementation of Precision Mental Healthcare: An Example." Administration and Policy in Mental Health and Mental Health Services Research 48, no. 5 (July 27, 2021): 936. http://dx.doi.org/10.1007/s10488-021-01149-z.

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The article “Working Towards the Development and Implementation of Precision Mental Healthcare: An Example” written by “Wolfgang Lutz, Brian Schwartz, Juan Martin Gomez Penedo, Kaitlyn Boyle, Anne‑Katharina Deisenhofer”, was originally published Online First without Open Access. After publication in volume 47, issue 5, pages 856–861 the author decided to opt for Open Choice and to make the article an Open Access publication. Therefore, the copyright of the article has been changed to © The Authors 2021 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0.

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Sato, Takashi, Tomoharu Mochizuki, Ryota Katsumi, and Yuki Takahashi. "Correction to: Functionally Oriented Alignment of the Lower Extremity Reflecting the Direction of Gait for Healthy Elderly, Knee Osteoarthritis, and Total Knee Arthroplasty Subjects." Journal of Medical and Biological Engineering 41, no. 3 (February 17, 2021): 403. http://dx.doi.org/10.1007/s40846-021-00604-4.

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The article “Functionally Oriented Alignment of the Lower Extremity Reflecting the Direction of Gait for Healthy Elderly, Knee Osteoarthritis, and Total Knee Arthroplasty Subjects”, written by Takashi Sato · Tomoharu Mochizuki. Ryota Katsumi and Yuki Takahashi, was originally published Online First without Open Access. After publication in volume 40, issue 6, page 887–898 the author decided to opt for Open Choice and to make the article an Open Access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2021 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/), which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The original article has been corrected.

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Khamis, Tashmin, Geraldine Van Gyn, and Jane Rarieya. "Introduction to the special issue of SOTL in the South: advancing student engagement in learning – experiences from Pakistan." Scholarship of Teaching and Learning in the South 3, no. 1 (April 25, 2019): 1. http://dx.doi.org/10.36615/sotls.v3i1.102.

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Tashmin Khamis, Geraldine van Gyn and Jane Rarieya edited this special issue of SOTL in the South. This publication is one of the noteworthy outcomes of the September 2017 SoTL Conference on Active Learning Pedagogies in Higher Education, hosted by the Network of Teaching and Learning at the Aga Khan University (AKU), that was held in Karachi, Pakistan. The theme which unites all the articles in this special issue is Advancing Student Engagement in Learning. How to cite this editorial: KHAMIS, Tashmin; VAN GYN, Geraldine; RARIEYA, Jane. Editorial: Introduction to the special issue of SOTL in the South: advancing student engagement in learning – experiences from Pakistan. Scholarship of Teaching and Learning in the South. v. 3, n. 1, p. 1-5, Apr. 2019. Available at: https://sotl-south-journal.net/?journal=sotls&page=article&op=view&path%5B%5D=102&path%5B%5D=33 This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

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Takahashi, Kohji, and Reiji Masuda. "Correction to: Nurture is above nature: nursery experience determines habitat preference of red sea bream Pagrus major juveniles." Journal of Ethology 38, no. 1 (December 20, 2019): 133. http://dx.doi.org/10.1007/s10164-019-00633-2.

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The article Nurture is above nature: nursery experience determines habitat preference of red sea bream Pagrus major juveniles, written by Kohji Takahashi and Reiji Masuda, was originally published Online First without Open Access. After publication in volume 37, issue 3, page 317–323 the author decided to opt for Open Choice and to make the article an Open Access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2019 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Kaikkonen, Jukka-Pekka, Abhilash Thanniyil Sebastian, Patrik Laiho, Nan Wei, Marco Will, Yongping Liao, Esko I. Kauppinen, and Pertti J. Hakonen. "Erratum to: Suspended superconducting weak links from aerosol-synthesized single-walled carbon nanotubes." Nano Research 14, no. 3 (September 15, 2020): 894. http://dx.doi.org/10.1007/s12274-020-3110-4.

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The article “Suspended superconducting weak links from aerosol-synthesized single-walled carbon nanotubes” written by Jukka-Pekka Kaikkonen1, Abhilash Thanniyil Sebastian1, Patrik Laiho3, Nan Wei3, Marco Will1,2, Yongping Liao3, Esko I. Kauppinen3, and Pertti J. Hakonen1,2, was originally published Online First without Open Access. After publication online first, the author decided to opt for Open Choice and to make the article an Open Access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.The original article has been corrected.

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Miwa, Shuichiro, and Takashi Hibiki. "Correction to: State-of-the-art in plant component flow-induced vibration (FIV)." Experimental and Computational Multiphase Flow 3, no. 4 (January 8, 2021): 321. http://dx.doi.org/10.1007/s42757-020-0096-9.

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The article “State-of-the-art in plant component flow-induced vibration (FIV)” written by Shuichiro Miwa and Takashi Hibiki, was originally published electronically on the publisher’s internet portal (currently SpringerLink) on 20 August 2019 without open access. After publication in Volume 2, Issue 1, page 1–12, the author(s) decided to opt for Open Choice and to make the article an open access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Yeoh, Guan Heng. "Correction to: Thermal hydraulic considerations of nuclear reactor systems: Past, present and future challenges." Experimental and Computational Multiphase Flow 3, no. 4 (January 8, 2021): 318. http://dx.doi.org/10.1007/s42757-020-0093-z.

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The article “Thermal hydraulic considerations of nuclear reactor systems: Past, present and future challenges” written by Guan Heng Yeoh, was originally published electronically on the publisher’s internet portal (currently SpringerLink) on 08 April 2019 without open access. After publication in Volume 1, Issue 1, page 3–27, the author(s) decided to opt for Open Choice and to make the article an open access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Hibiki, Takashi. "Correction to: One-dimensional drift-flux correlations for two-phase flow in medium-size channels." Experimental and Computational Multiphase Flow 3, no. 4 (January 8, 2021): 319. http://dx.doi.org/10.1007/s42757-020-0094-y.

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The article “One-dimensional drift-flux correlations for two-phase flow in medium-size channels” written by Takashi Hibiki, was originally published electronically on the publisher’s internet portal (currently SpringerLink) on 17 April 2019 without open access. After publication in Volume 1, Issue 2, page 85–100, the author(s) decided to opt for Open Choice and to make the article an open access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Inthavong, Kiao. "Correction to: From indoor exposure to inhaled particle deposition: A multiphase journey of inhaled particles." Experimental and Computational Multiphase Flow 3, no. 4 (January 8, 2021): 322. http://dx.doi.org/10.1007/s42757-020-0097-8.

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The article “From indoor exposure to inhaled particle deposition: A multiphase journey of inhaled particles” written by Kiao Inthavong, was originally published electronically on the publisher’s internet portal (currently SpringerLink) on 22 October 2019 without open access. After publication in Volume 2, Issue 2, page 59–78, the author(s) decided to opt for Open Choice and to make the article an open access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Zimmerman, Lindsey, David W. Lounsbury, Craig S. Rosen, Rachel Kimerling, Jodie A. Trafton, and Steven E. Lindley. "Correction to: Participatory System Dynamics Modeling: Increasing Stakeholder Engagement and Precision to Improve Implementation Planning in Systems." Administration and Policy in Mental Health and Mental Health Services Research 48, no. 2 (January 12, 2021): 377. http://dx.doi.org/10.1007/s10488-020-01105-3.

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The article “Participatory System Dynamics Modeling: Increasing Stakeholder Engagement and Precision to Improve Implementation Planning in Systems”, written by “Lindsey Zimmerman, David W. Lounsbury, Craig S. Rosen, Rachel Kimerling, Jodie A. Trafton, Steven E. Lindley”, was originally published Online First without Open Access. After publication in volume 43, issue 6, pages 834–849 the author decided to opt for Open Choice and to make the article an Open Access publication. Therefore, the copyright of the article has been changed to © The Authors 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0.

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Shen, Chien-Lung, Tzu-Hao Huang, Po-Chun Hsu, Ya-Chi Ko, Fen-Ling Chen, Wei-Chun Wang, Tsair Kao, and Chia-Tai Chan. "Correction to: Respiratory Rate Estimation by Using ECG, Impedance, and Motion Sensing in Smart Clothing." Journal of Medical and Biological Engineering 40, no. 5 (July 23, 2018): 1. http://dx.doi.org/10.1007/s40846-018-0440-8.

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The article “Respiratory Rate Estimation by Using ECG, Impedance, and Motion Sensing in Smart Clothing”, written by Chien-Lung Shen, Tzu-Hao Huang, Po-Chun Hsu, Ya-Chi Ko, Fen-Ling Chen, Wei-Chun Wang, Tsair Kao, Chia-Tai Chan was originally published electronically on the publisher’s internet portal (currently SpringerLink) on 1 July 2017 without open access. After publication in volume [37], issue [6], page [826–842] the authors decided to opt for Open Choice and to make the article an open access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2018 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Jiang, Shengyao, Jiyuan Tu, Xingtuan Yang, and Nan Gui. "Correction to: A review of pebble flow study for pebble bed high temperature gas-cooled reactor." Experimental and Computational Multiphase Flow 3, no. 4 (January 8, 2021): 320. http://dx.doi.org/10.1007/s42757-020-0095-x.

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The article “A review of pebble flow study for pebble bed high temperature gas-cooled reactor” written by Shengyao Jiang, Jiyuan Tu, Xingtuan Yang, and Nan Gui, was originally published electronically on the publisher’s internet portal (currently SpringerLink) on 11 June 2019 without open access. After publication in Volume 1, Issue 3, page 159–176, the author(s) decided to opt for Open Choice and to make the article an open access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Hibiki, Takashi, and Tetsuhiro Ozaki. "Correction to: Effect of interfacial drag force model on code prediction for upward adiabatic two-phase bubbly flow in vertical channels." Experimental and Computational Multiphase Flow 3, no. 4 (January 8, 2021): 323. http://dx.doi.org/10.1007/s42757-020-0098-7.

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The article “Effect of interfacial drag force model on code prediction for upward adiabatic two-phase bubbly flow in vertical channels” written by Takashi Hibiki and Tetsuhiro Ozaki, was originally published electronically on the publisher’s internet portal (currently SpringerLink) on 04 January 2020 without open access. After publication in Volume 2, Issue 4, page 212–224, the author(s) decided to opt for Open Choice and to make the article an open access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Oki, Yusuke, Kent Yoshikawa, Hiroshi Takeuchi, Shota Kikuchi, Hitosi Ikeda, Daniel J. Scheeres, Jay W. McMahon, et al. "Correction to: Orbit insertion strategy of Hayabusa2’s rover with large release uncertainty around the asteroid Ryugu." Astrodynamics 5, no. 2 (February 10, 2021): 183. http://dx.doi.org/10.1007/s42064-021-0100-6.

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The article “Orbit insertion strategy of Hayabusa2’s rover with large release uncertainty around the asteroid Ryugu” written by Yusuke Oki, Kent Yoshikawa, Hiroshi Takeuchi et al., was originally published electronically on the publisher’s internet portal (currently SpringerLink) on 05 November 2020 without open access. After publication in Volume 4, Issue 4, page 309–329, the author(s) decided to opt for Open Choice and to make the article an open access publication. Therefore, the copyright of the article has been changed to © The Author(s) 2020 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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ZHANG, ZHI-QIANG. "A new era in zoological nomenclature and taxonomy: ICZN accepts e-publication and launches ZooBank." Zootaxa 3450, no. 1 (September 4, 2012): 8. http://dx.doi.org/10.11646/zootaxa.3450.1.2.

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In this issue of Zootaxa, we publish the amendment of the International Code of Zoological Nomenclature, 4th edition (ICZN 1999) by the International Commission on Zoological Nomenclature (ICZN 2012: 1–7) to expand and refine methods of publication. This landmark publication not only defines the conditions for the validity of e-publications in zoological nomenclature and taxonomy, but also announces the formal transition of ZooBank (http://zoobank.org/) from being the prototype ICZN registry (started on 1 Jan. 2008; see Pyle et al. 2008) to the official ICZN registry. It should be noted that the original proposals for the amendment were also first published in Zootaxa (ICZN 2008), when we made a special effort to publish the paper for open access under the “Creative Commons Attribution License”[1] (Zhang 2008). We are doing the same here for this amendment (ICZN 2012) to ensure it reaches the widest possible readership.[1]See details http://creativecommons.org/licenses/by/3.0/

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Thursby, Jerry G., and Marie C. Thursby. "Industry Perspectives on Licensing University Technologies." Industry and Higher Education 15, no. 4 (August 2001): 289–94. http://dx.doi.org/10.5367/000000001101295786.

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The authors report results of a survey of industry licensing executives who identified personal contacts between their R&D staff and university personnel as the most important source of university technologies. Journal publications and presentations at professional meetings were also important. While the least important sources were marketing efforts by universities and canvassing of universities, a number of executives did indicate that they were important. For those who do not license-in from universities, the most important reasons for not licensing-in (other than limited overall license-in activities) were reasons related to the nature of university research. A number cited university policies regarding delay of publication and ownership.

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Forrest, Jamie I., Craig R. Rayner, Jay J. H. Park, and Edward J. Mills. "Correction to: Early Treatment of COVID-19 Disease: A Missed Opportunity." Infectious Diseases and Therapy 9, no. 4 (November 9, 2020): 721. http://dx.doi.org/10.1007/s40121-020-00366-7.

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Tadesse, Melkie Getnet, Yan Chen, Lichuan Wang, Vincent Nierstrasz, and Carmen Loghin. "Correction to: Tactile Comfort Prediction of Functional Fabrics from Instrumental Data Using Intelligence Systems." Fibers and Polymers 20, no. 1 (January 2019): 199. http://dx.doi.org/10.1007/s12221-019-2000-1.

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The article Tactile Comfort Prediction of Functional Fabrics from Instrumental Data Using Intelligence Systems, written by Melkie Getnet Tadesse, Yan Chen, Lichuan Wang, Vincent Nierstrasz, and Carmen Loghin, was erroneously originally published electronically on the publisher’s internet portal (currently SpringerLink) on 15 February 2019 without open access. After publication this was corrected and the copyright of the article changed in April 2019 to © The Author(s) 2019 and the article is forthwith distributed under the terms of the Creative Commons Attribution 4.0 International License (http://http://creativecommons.org/licenses/by/4.0/), which permits use, duplication, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license and indicate if changes were made. The original article has been corrected.

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Polilova, T. A. "About the license agreement for the work-for-hire publication." Russian Digital Libraries Journal 22, no. 2 (2019): 119–41. http://dx.doi.org/10.26907/1562-5419-2019-22-2-119-141.

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Simpson, Zachary. "Reimagining higher education in the wake of COVID-19." Scholarship of Teaching and Learning in the South 4, no. 1 (April 28, 2020): 1. http://dx.doi.org/10.36615/sotls.v4i1.145.

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In this editorial, journal editor-in-chief, Zach Simpson, introduces the peer-reviewed articles and reflections in Volume 4, Issue 2 of the SOTL in the South journal. These papers, Zach argues, each reimagine aspects of higher education: the classroom, the curriculum, the role of SOTL and so on. In addition, the editorial addresses the current (at the time of publication) coronavirus pandemic afflicting the world, arguing that COVID-19 is not only deepening inequalities between the global North and South, but also rendering SOTL ever more important.Keywords: SOTL in the South, teaching and learning, higher educaiton, special issueHow to cite this article: Simpson, S. 2020. Reimagining higher education in the wake of COVID-19. Scholarship of Teaching and Learning in the South. v. 4, n. 1, p. 1-3. April 2020. Available at: https://sotl-south-journal.net/?journal=sotls&page=article&op=view&path%5B%5D=145This work is licensed under the Creative Commons Attribution 4.0 International License.To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

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Masaiti, Gift, Kennedy Mwila, Cecilia Kulyambanino, and Tommie Njobvu. "Faculty productivity in Zambian higher education in the face of internationalization: Unpacking research, publication and citation at the University of Zambia." Scholarship of Teaching and Learning in the South 5, no. 1 (April 28, 2021): 66. http://dx.doi.org/10.36615/sotls.v5i1.153.

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This paper is based on a study that aimed at examining and interrogating the extent of faculty productivity in Zambia in terms of research, publication and citation with specific reference to the University of Zambia (UNZA). The paper invokes the Network Theory of Internationalisation of Higher Education founded by Johanson & Mattsson (1988).The research design used in this article is a convergent parallel mixed-methods design. The sample size total was 254, of which 244 were academic staff and 10 were key informants from management. Qualitative data was analysed according to emerging themes, while quantitative data was analysed using descriptive and inferential statistics. The findings of this paper seem to suggest that faculties at UNZA were highly involved in research (applied and basic) at 75%, but with poor incidences of transforming research into publication and innovation. Only 38% of respondents published articles annually (increasing to 62% within two years) in local and international journals. While respondents who had published books in the last two years was as low as 19.5%. UNZA productivity output in terms of citation was relatively poor, below the expected standard of h-index and citation index of a flagship university which has a track record of more than 40 years of operation as a fully-fledged comprehensive university. Results primarily showed that the UNZA had an average h-index of 4.50 and a citation index of 156.87 which are significantly lower than the world averages of 17.50 and 971, respectively. The paper finally argues that, UNZA like most of the flagship and comprehensive universities in Africa, are quickly transforming from a teaching university into a research university based on the influence of the global North whose research agenda is central – at the expense of teaching. In order to improve on research productivity, this paper recommends that UNZA deliberately identify relevant industries, and global and regional partners to genuinely collaborate with as a way of leveraging resources and expertise. There is also a growing desire by universities in the global South to work closely together as way of improving their own productivity capacity in terms of research, publication, citation and redefine the concept of internationalization to fit the global South. Key words: Faculty, Productivity, Research, Publication, Citations, University of Zambia How to cite this article: Masaiti, G., Mwila, K., Kulyambanino, C. & Njobvu, T. 2021. Faculty productivity in Zambian higher education in the face of internationalization: unpacking research, publication and citation at the University of Zambia. Scholarship of Teaching and Learning in the South. 5(1): 66-86. DOI: 10.36615/sotls.v5i1.153. This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

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Hill, Emma, and Mike Rossner. "You wrote it; you own it!" Journal of Experimental Medicine 205, no. 5 (April 30, 2008): 996–97. http://dx.doi.org/10.1084/jem.20080744.

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Authors of papers published in Rockefeller University Press journals (The Journal of Cell Biology, The Journal of Experimental Medicine, or The Journal of General Physiology) now retain copyright to their published work. This permits authors to reuse their own work in any way, as long as they attribute it to the original publication. Third parties may use our published materials under a Creative Commons license, six months after publication.

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Hill, Emma, and Mike Rossner. "You wrote it; you own it!" Journal of Cell Biology 181, no. 3 (April 30, 2008): 405–6. http://dx.doi.org/10.1083/jcb.200804037.

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Authors of papers published in Rockefeller University Press journals (The Journal of Cell Biology, The Journal of Experimental Medicine, or The Journal of General Physiology) now retain copyright to their published work. This permits authors to reuse their own work in any way, as long as they attribute it to the original publication. Third parties may use our published materials under a Creative Commons license, six months after publication.

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Hill, Emma, and Mike Rossner. "You Wrote It; You Own It!" Journal of General Physiology 131, no. 6 (May 1, 2008): 521–22. http://dx.doi.org/10.1085/jgp.200810020.

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Authors of papers published in Rockefeller University Press journals (The Journal of Cell Biology, The Journal of Experimental Medicine, or The Journal of General Physiology) now retain copyright to their published work. This permits authors to reuse their own work in any way, as long as they attribute it to the original publication. Third parties may use our published materials under a Creative Commons license, six months after publication.

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TSVETKOVA, Marina S., and Vladimir M. KIRYUKHIN. "Training in Writing the Simplest Programs from Early Ages." Olympiads in Informatics 13 (July 13, 2019): 237–40. http://dx.doi.org/10.15388/ioi.2019.17.

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This article is the announcement of a chapter “Advanced digital competence of teachers” in the new scientific publication “Teacher Education in the 21st Century” (IntechOpen, London, 2019, academic edition Reginald Monyai,). This chapter is distributed under the terms of the Creative Commons Attribution License.

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Railean, Elena. "THE GLOBAL CONTEXT OF OPEN ACCESS TO SCIENTIFIC PUBLICATIONS." Akademos 60, no. 1 (June 2021): 23–28. http://dx.doi.org/10.52673/18570461.21.1-60.02.

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Scientific publications are migrating to the digital environment. This phenomenon is characterized by universal norms determined by specifics of the global context ensuring open access to scientific publications. To investigate these norms in this article the ideal type method is applied, and the research data are extracted with the on-line search engine Google Books Ngram Viewer. The results obtained are: a) the study of dynamics of open science is a priority concerning the topics of open access and license of using open information; b) in the area of open science, the importance of studying the forms of access to pre-published works is prioritized; c) “the green access” is the most investigated model of the open access to scientific publications. The publication of scientific results in open access requires regular adjustment to the global norms of open science.

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Carroll, Peter G., and John S. Roberts. "Research Tool Patents — Rumours of Their Death are Greatly Exaggerated." Industry and Higher Education 20, no. 3 (June 2006): 189–93. http://dx.doi.org/10.5367/000000006777691025.

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Using a patented drug during clinical trials is not infringement [35 U.S.C. 271(e)(1)]. Merck v Integra enlarged this ‘safe harbour’ to accommodate preclinical use of drugs and patented ‘research tools' if ‘reasonably related’ to FDA approval. The decision allowed lower courts, should they wish, to find any use of a research tool, except for exploratory research, ‘reasonably related’. But Third Wave v Stratagene, decided on 5 August 2005 by a Federal District Court, will inhibit any such judicial impulse. Research tool patents, therefore, should retain value. Users will license rather than pay to test enforceability. Accordingly, universities should seek out emerging research tools and evaluate their potential utility before and after FDA approval (for example, for quality control). Finally, the article stresses protecting tools by contract instead of by patent (for example, an exclusive, pre-publication licence to screen compound libraries).

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Bolshakov, Denis Yu. "Analytics in the publication of a scientific journal." Science Editor and Publisher 5, no. 2 (January 26, 2021): 102–12. http://dx.doi.org/10.24069/2542-0267-2020-2-102-112.

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It is shown that the analysis of editorial and publishing processes helps to estimate the time of passing manuscripts in the editorial office of a scientific journal and to control the contractor when performing technical work on literary editing and layout of articles in the journal. For analytics, the apparatus of probability theory and mathematical statistics is used, as well as time series for predicting the dynamics of incoming articles and predicting the prospects for their publication. Based on the results obtained, it is shown that the study of time indicators of the processes of arrival and acceptance of articles for publication, reviewing, literary editing, layout and distribution and receipt of license agreements allows you to plan the work on the filling of articles in journal issues for the year ahead, monitor the work of reviewers on the examination of articles sent to them and manage the contractor preparing issues for publication, when performing technical work. All the considered analytical methods are available for use by the editors of the scientific journal. To simplify the compilation and work with the proposed analytics tools, we recommend software for working with spreadsheets.

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Górska, Małgorzata, and Jarosław Molendowski. "Experimental use of selected steganographic and crypto-graphic algorithms - laboratory workstation." AUTOBUSY – Technika, Eksploatacja, Systemy Transportowe 24, no. 6 (June 30, 2019): 168–73. http://dx.doi.org/10.24136/atest.2019.145.

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The main task discussed in this publication was to prepare a laboratory stand to investigate the confidentiality of information processed. The first part of the article presents a comparison of the possibilities of two open license programs - encryption tools that implement encryption with the use of AES block cipher. The second part describes the operation of two programs created in C++ for the needs of the laboratory workstation. The first one performs classic, changeable encryption, the second one uses XOR operation for encryption.

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Thavamani, Kotti. "Directory of Open Access Journals: A Bibliometric Study of Library and Information Science." Collaborative Librarianship 5, no. 4 (2013): 246–55. http://dx.doi.org/10.29087/2013.5.4.03.

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This paper presents a bibliometric study of library-focused journals represented in the Directory of Open Access Journals (DOAJ). A total of 151 library and information science journals were examined related to a number of issues: subject-specific distribution of library journals, interdisciplinary aspects, country of origin, language-used and other language characteristics, numbers of titles first appearing in given years, publication fees, the existence of license agreements, and the types of organizations having journals in the Directory that focus on libraries or librarianship.

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Heise, Christian, and Joshua M. Pearce. "From Open Access to Open Science: The Path From Scientific Reality to Open Scientific Communication." SAGE Open 10, no. 2 (April 2020): 215824402091590. http://dx.doi.org/10.1177/2158244020915900.

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Although opening up of research is considered an appropriate and trend-setting model for future scientific communication, it can still be difficult to put open science into practice. How open and transparent can a scientific work be? This article investigates the potential to make all information and the whole work process of a qualification project such as a doctoral thesis comprehensively and freely accessible on the internet with an open free license both in the final form and completely traceable in development. The answer to the initial question, the self-experiment and the associated demand for openness, posed several challenges for a doctoral student, the institution, and the examination regulations, which are still based on the publication of an individually written and completed work that cannot be viewed by the public during the creation process. In the case of data and other documents, publication is usually not planned even after completion. This state of affairs in the use of open science in the humanities will be compared with open science best practices in the physical sciences. The reasons and influencing factors for open developments in science and research are presented, empirically and experimentally tested in the development of the first completely open humanities-based PhD thesis. The results of this two-part study show that it is possible to publish everything related to the doctoral study, qualification, and research process as soon as possible, as comprehensively as possible, and under an open license.

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Maziarz, Aleksander. "Nadużycie pozycji dominującej przez wykonywanie praw własności intelektualnej w prawie konkurencji Unii Europejskiej." Przegląd Prawa i Administracji 114 (August 10, 2018): 569–80. http://dx.doi.org/10.19195/0137-1134.114.37.

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ABUSE OF DOMINANT POSITION IN RELATION TO INTELLECTUAL PROPERTY RIGHTS IN EU COMPETITION LAWThe exercise of intellectual property rights may be contrary to the competition law. The role of first mentioned law is to protect the interests of their owners from unauthorized use by competitors, which naturally leads to the creation form of monopoly. Competition law is aimed at countering monopolies and thereby responding to the restriction of competition, which may also be a result of exercise of intellectual property rights. The publication analyses in what way such rights can abuse dominant position. In particular it will focus on such practices as refusing to grant a license, denying access to a key device or abusing collective management of intellectual property rights. The publication will try to determine conditions which qualify exercise of intellectual property rights as abuse of dominant position.

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Barański, Michał. "Informacja jako przedmiot zobowiązania umownego." Studia Iuridica 72 (April 17, 2018): 41–69. http://dx.doi.org/10.5604/01.3001.0011.7587.

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Information as a matter of contractual obligation, thus far has not been subject to complex considerations of civil law science. In this respect, judicature either, does not provide plausible material for analysis. The basic aims of the author`s publication were focused on an attempt to systematize knowledge concerning information within civil law aspect together with highlighting still multiplying classification and interpretative difficulties which stem from certain legal solutions (possibly lack of them), having influence on the main subject of this article. The publication deals with acknowledging information as a matter of a service. Besides, there were presented regulating concepts of the above mentioned services in the new Civil Law Code and Draft Common Frame of Reference. The article was dedicated to considering the possibility of acknowledging information, among others, as a matter of a specific-task contract, license contract, know-how contract.

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Jusoh, Zuraini, Noristisarah Abd Shattar, Hayati Adilin Mohd Abd Majid, and Nur Dalila Adenan. "Determination of Hazard in Captive Hotel." Asian Journal of Quality of Life 3, no. 10 (March 18, 2018): 31. http://dx.doi.org/10.21834/ajqol.v3i10.96.

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This study is to identify the critical risk in cleaning process at the laundry area by using Semi-Quantitative Risk Assessment Matrix. In the identification of hazard, observation at the workplace, semi-structure interviewed four workers who are an expert in the respective area and reviewed for publication report from authorities’ bodies used as an input in risk assessment. The possibility of fingers caught into the flatwork iron (risk value: 9) has been identified the most critical risk. The appropriate risk control was isolation, engineering controls, administrative controls and personal protective equipment. This study may help employer be more proactive in ensuring the safety and health of workers.Keywords: Semi-Quantitative Risk Assessment, Hazard, Risk Control, Captive Hotel eISSN 2398-4279 © 2018. The Authors. Published for AMER ABRA cE-Bs by e-International Publishing House, Ltd., UK. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Peer–review under responsibility of AMER (Association of Malaysian Environment-Behaviour Researchers), ABRA (Association of Behavioural Researchers on Asians) and cE-Bs (Centre for Environment-Behaviour Studies), Faculty of Architecture, Planning & Surveying, Universiti Teknologi MARA, Malaysia.

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Cho, Ken Ying, Filzani Illia Ibrahim, and Zahari Zubir. "Analyzing Spaces for Social Interaction in Coworking Space: A case study on Common Ground Damansara Heights." Environment-Behaviour Proceedings Journal 5, no. 13 (March 24, 2020): 379–86. http://dx.doi.org/10.21834/e-bpj.v5i13.2068.

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Coworking is defined as people work and share the same facilities; creating social interaction to form a community. Through literature publication in Asia, most of the studies are focusing on market value and revenue; lack study on social interaction topic. This study aims to analyse spaces for user social interaction in coworking space in Common Ground Damansara Heights. To achieve the aim, it identifies types of social interaction in coworking space. Site observation and data are analysed to determine the availability of spaces for social interaction. This conclusion informs suggestion to designers and academics on consideration in coworking spaces for user to socialise.Keywords: Coworking; social interactioneISSN: 2398-4287 © 2020. The Authors. Published for AMER ABRA cE-Bs by e-International Publishing House, Ltd., UK. This is an open access article under the CC BYNC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Peer–review under responsibility of AMER (Association of Malaysian Environment-Behaviour Researchers), ABRA (Association of Behavioural Researchers on Asians) and cE-Bs (Centre for Environment-Behaviour Studies), Faculty of Architecture, Planning & Surveying, Universiti Teknologi MARA, Malaysia.DOI: https://doi.org/10.21834/e-bpj.v5i13.2068

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Mohamad Hashim, Haswira Nor, Anida Mahmood, Fazlin Mohamed Zain, and Nurul Shuhada Suhaimi. "Modalities to Address Legal Impediments to the Citizens’Right to Impart Public Sector Information." Environment-Behaviour Proceedings Journal 5, SI1 (June 1, 2020): 211–17. http://dx.doi.org/10.21834/ebpj.v5isi1.2322.

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This paper conducts a comparative analysis of various modalities currently being adopted in selected countries to address legal impediments to the citizens’ rights to impart public sector information (PSI). Previous studies have identified a myriad of laws currently in force in Malaysia which impede the citizens’ rights to impart PSI. In the absence of sui generis law on the right to information, disclosure, publication, communication and distribution of PSI is subject to these laws. This paper surveyed to identify the most appropriate modalities for adaptation in Malaysia and later suggested the appropriate modalities to address the legal impediments. Keywords: Legal impediment; Right to information; Modalities; Citizens. eISSN: 2398-4287 © 2020. The Authors. Published for AMER ABRA cE-Bs by e-International Publishing House, Ltd., UK. This is an open access article under the CC BYNC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Peer–review under responsibility of AMER (Association of Malaysian Environment-Behaviour Researchers), ABRA (Association of Behavioural Researchers on Asians) and cE-Bs (Centre for Environment-Behaviour Studies), Faculty of Architecture, Planning & Surveying, Universiti Teknologi MARA, Malaysia. DOI: https://doi.org/10.21834/ebpj.v5iSI1.2322

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Zainuddin, Nasa’ie, Asliza Aris, Najua Tulos, and Muhammad Hisyam Zakaria. "The Evolution of Malay Bride’s Traditional Wedding Attire in Peninsular Malaysia." Environment-Behaviour Proceedings Journal 5, SI1 (June 1, 2020): 239–47. http://dx.doi.org/10.21834/ebpj.v5isi1.2326.

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A Malay wedding ceremony is still preserved until now despite several changes that took place in the custom. Publication and comprehensive documentation on the Malay traditional attire is still not widely produced, and less attention in recording this type of clothing. The main objective of this research was to identify the styles of Malay bride’s traditional wedding as well as to categorize the styles from the year 1960 until 2016. The present study, which used the qualitative research approach. This research will be beneficial to the upcoming nation for their future references, especially to preserve the Malay traditional wedding culture. Keywords: attire; evolution; Malay; traditional; wedding. eISSN: 2398-4287 © 2020. The Authors. Published for AMER ABRA cE-Bs by e-International Publishing House, Ltd., UK. This is an open access article under the CC BYNC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Peer–review under responsibility of AMER (Association of Malaysian Environment-Behaviour Researchers), ABRA (Association of Behavioural Researchers on Asians) and cE-Bs (Centre for Environment-Behaviour Studies), Faculty of Architecture, Planning & Surveying, Universiti Teknologi MARA, Malaysia. DOI: https://doi.org/10.21834/ebpj.v5iSI1.2326

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Vejnar, Charles E., and Antonio J. Giraldez. "LabxDB: versatile databases for genomic sequencing and lab management." Bioinformatics 36, no. 16 (June 5, 2020): 4530–31. http://dx.doi.org/10.1093/bioinformatics/btaa557.

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Abstract Summary Experimental laboratory management and data-driven science require centralized software for sharing information, such as lab collections or genomic sequencing datasets. Although database servers such as PostgreSQL can store such information with multiple-user access, they lack user-friendly graphical and programmatic interfaces for easy data access and inputting. We developed LabxDB, a versatile open-source solution for organizing and sharing structured data. We provide several out-of-the-box databases for deployment in the cloud including simple mutant or plasmid collections and purchase-tracking databases. We also developed a high-throughput sequencing (HTS) database, LabxDB seq, dedicated to storage of hierarchical sample annotations. Scientists can import their own or publicly available HTS data into LabxDB seq to manage them from production to publication. Using LabxDB’s programmatic access (REST API), annotations can be easily integrated into bioinformatics pipelines. LabxDB is modular, offering a flexible framework that scientists can leverage to build new database interfaces adapted to their needs. Availability and implementation LabxDB is available at https://gitlab.com/vejnar/labxdb and https://labxdb.vejnar.org for documentation. LabxDB is licensed under the terms of the Mozilla Public License 2.0. Supplementary information Supplementary data are available at Bioinformatics online.

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Moshontz, Hannah, Grace Binion, Haley Walton, Benjamin T. Brown, and Moin Syed. "A Guide to Posting and Managing Preprints." Advances in Methods and Practices in Psychological Science 4, no. 2 (April 2021): 251524592110199. http://dx.doi.org/10.1177/25152459211019948.

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Posting preprints online allows psychological scientists to get feedback, speed dissemination, and ensure public access to their work. This guide is designed to help psychological scientists post preprints and manage them across the publication pipeline. We review terminology, provide a historical and legal overview of preprints, and give guidance on posting and managing preprints before, during, or after the peer-review process to achieve different aims (e.g., get feedback, speed dissemination, achieve open access). We offer concrete recommendations to authors, such as post preprints that are complete and carefully proofread; post preprints in a dedicated preprint server that assigns DOIs, provides editable metadata, is indexed by GoogleScholar, supports review and endorsements, and supports version control; include a draft date and information about the paper’s status on the cover page; license preprints with CC BY licenses that permit public use with attribution; and keep preprints up to date after major revisions. Although our focus is on preprints (unpublished versions of a work), we also offer information relevant to postprints (author-formatted, post-peer-review versions of a work) and work that will not otherwise be published (e.g., theses and dissertations).

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Thomson, Jessica L., and Alicia S. Landry. "Three datasets for nutrition environment measures of food outlets located in the Lower Mississippi Delta region of the United States." F1000Research 9 (November 9, 2020): 1307. http://dx.doi.org/10.12688/f1000research.27192.1.

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This data note provides details of a research database containing 266 food outlets located in five rural towns in the Lower Mississippi Delta region of Mississippi, whose nutrition environments were measured from 2016 to 2018. The food outlet types include grocery stores, convenience stores, full-service restaurants, and fast food restaurants. The purpose of this publication is to describe the three datasets for external researchers who may be interested in making use of them. The datasets are available from the USDA National Agricultural Library’s Ag Data Commons under a CC0 1.0 Universal License: https://doi.org/10.15482/USDA.ADC/1503704.

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Murakami, Yu, Tomohisa Horibe, and Masato Kinoshita. "Correction to: Development of an efficient bioreactor system for delivering foreign proteins secreted from liver into eggs with a vitellogenin signal in medaka Oryzias latipes." Fisheries Science 86, no. 3 (April 4, 2020): 599. http://dx.doi.org/10.1007/s12562-020-01412-6.

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The article "Development of an efficient bioreactor system for delivering foreign proteins secreted from liver into eggs with a vitellogenin signal in medaka Oryzias latipes", written by Yu Murakami, Tomohisa Horibe and Masato Kinoshita was originally published electronically on the publisher's internet portal on 21 May 2019 without open access. After publication in volume [85], issue [4], page [677-685] with the author(s)' decision to opt for Open Choice the copyright of the article changed on 31st March 2020 to The Author(s) 2020 and the article is forthwith distributed under a Creative Commons Attribution 4.0 International License

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Thomson, Jessica L., and Alicia S. Landry. "Three datasets for nutrition environment measures of food outlets located in the Lower Mississippi Delta region of the United States." F1000Research 9 (May 24, 2021): 1307. http://dx.doi.org/10.12688/f1000research.27192.2.

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This data note provides details of a research database containing 266 food outlets located in five rural towns in the Lower Mississippi Delta region of Mississippi, whose nutrition environments were measured from 2016 to 2018. The food outlet types include grocery stores, convenience stores, full-service restaurants, and fast food restaurants. The purpose of this publication is to describe the three datasets for external researchers who may be interested in making use of them. The datasets are available from the USDA National Agricultural Library’s Ag Data Commons under a CC0 1.0 Universal License: https://doi.org/10.15482/USDA.ADC/1503704.

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Bateman, Alex, Maria-Jesus Martin, Sandra Orchard, Michele Magrane, Rahat Agivetova, Shadab Ahmad, Emanuele Alpi, et al. "UniProt: the universal protein knowledgebase in 2021." Nucleic Acids Research 49, no. D1 (November 25, 2020): D480—D489. http://dx.doi.org/10.1093/nar/gkaa1100.

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Abstract The aim of the UniProt Knowledgebase is to provide users with a comprehensive, high-quality and freely accessible set of protein sequences annotated with functional information. In this article, we describe significant updates that we have made over the last two years to the resource. The number of sequences in UniProtKB has risen to approximately 190 million, despite continued work to reduce sequence redundancy at the proteome level. We have adopted new methods of assessing proteome completeness and quality. We continue to extract detailed annotations from the literature to add to reviewed entries and supplement these in unreviewed entries with annotations provided by automated systems such as the newly implemented Association-Rule-Based Annotator (ARBA). We have developed a credit-based publication submission interface to allow the community to contribute publications and annotations to UniProt entries. We describe how UniProtKB responded to the COVID-19 pandemic through expert curation of relevant entries that were rapidly made available to the research community through a dedicated portal. UniProt resources are available under a CC-BY (4.0) license via the web at https://www.uniprot.org/.

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Bouyssié, David, Anne-Marie Hesse, Emmanuelle Mouton-Barbosa, Magali Rompais, Charlotte Macron, Christine Carapito, Anne Gonzalez de Peredo, et al. "Proline: an efficient and user-friendly software suite for large-scale proteomics." Bioinformatics 36, no. 10 (February 25, 2020): 3148–55. http://dx.doi.org/10.1093/bioinformatics/btaa118.

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Abstract Motivation The proteomics field requires the production and publication of reliable mass spectrometry-based identification and quantification results. Although many tools or algorithms exist, very few consider the importance of combining, in a unique software environment, efficient processing algorithms and a data management system to process and curate hundreds of datasets associated with a single proteomics study. Results Here, we present Proline, a robust software suite for analysis of MS-based proteomics data, which collects, processes and allows visualization and publication of proteomics datasets. We illustrate its ease of use for various steps in the validation and quantification workflow, its data curation capabilities and its computational efficiency. The DDA label-free quantification workflow efficiency was assessed by comparing results obtained with Proline to those obtained with a widely used software using a spiked-in sample. This assessment demonstrated Proline’s ability to provide high quantification accuracy in a user-friendly interface for datasets of any size. Availability and implementation Proline is available for Windows and Linux under CECILL open-source license. It can be deployed in client–server mode or in standalone mode at http://proline.profiproteomics.fr/#downloads. Supplementary information Supplementary data are available at Bioinformatics online.

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Journal articles on the topic 'Publication license'

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