Journal articles: 'Plant microbiology'

1

Boa, Eric. "Aerial Plant Surface Microbiology." Plant Pathology 47, no. 4 (August 1998): 541. http://dx.doi.org/10.1046/j.1365-3059.1998.0223f.x.

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Beczner, J., and I. Bata-Vidács. "Microbiology of plant foods and related aspects." Acta Alimentaria 38, Supplement-1 (November 1, 2009): 99–115. http://dx.doi.org/10.1556/aalim.38.suppl.7.

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Vegetables and fruits are staple food for the human mankind, and they are also considered as the symbol of healthy nutrition. They are consumed fresh and cooked, in salad mixes, freshly pressed, fermented, minimally processed form, stored under different conditions, etc. Since they are in close contact with the environment, natural or artificial, and have a natural microbiota on their surface highly variable as a function of the surrounding, they are prone to get contaminated with human pathogens, too. More attention is paid to the food-borne outbreaks in the last 10 years related to the consumption of contaminated plant foods, and it is also in the focus of our interest. The main activities of the Unit cover the following areas: microbial contamination of fruits and vegetables, also in relation to the soil, the methods of cell count reduction using also non-thermal methods, the biofilm formation and the response ofBacillus cereusto the technological stresses.

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Bunt, J. S. "Marine microbiology." Aquatic Botany 36, no. 1 (December 1989): 103–5. http://dx.doi.org/10.1016/0304-3770(89)90098-3.

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Wetzei, Robert G. "Aquatic microbiology." Aquatic Botany 44, no. 4 (February 1993): 411–12. http://dx.doi.org/10.1016/0304-3770(93)90081-7.

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Thomsen, Helge Abildhauge. "Antarctic Microbiology." Phycologia 33, no. 6 (November 1994): 479–80. http://dx.doi.org/10.2216/i0031-8884-33-6-479.1.

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Bandopadhyay, Sandip. "Application of Plant Growth Promoting Bacillus thuringiensis as Biofertilizer on Abelmoschus esculentus Plants under Field Condition." Journal of Pure and Applied Microbiology 14, no. 2 (May 7, 2020): 1287–94. http://dx.doi.org/10.22207/jpam.14.2.24.

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Jones, J. Gwynfryn, and G. Rheinheimer. "Aquatic Microbiology." Journal of Ecology 74, no. 3 (September 1986): 911. http://dx.doi.org/10.2307/2260413.

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8

Harborne, Jeffrey B. "Pigment microbiology." Phytochemistry 33, no. 4 (July 1993): 949. http://dx.doi.org/10.1016/0031-9422(93)85316-j.

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9

VAN DONKERSGOED, JOYCE, KLAUS W. F. JERICHO, HEIDI GROGAN, and BEN THORLAKSON. "Preslaughter Hide Status of Cattle and the Microbiology of Carcasses." Journal of Food Protection 60, no. 12 (December 1, 1997): 1502–8. http://dx.doi.org/10.4315/0362-028x-60.12.1502.

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An assessment was made of the association between tag (mud, bedding, and manure) attached to hides of beef cattle at slaughter and bacterial deposition on carcasses. A total of 624 carcasses from 52 lots of cattle in southern Alberta from January to June 1996 were studied at a high-line-speed abattoir (HLSP) which processed 285 carcasses per h and at a slow-line-speed abattoir (SLSP) which processed 135 carcasses per h. Tag was quantitatively assessed on the belly, legs, and sides of 12 carcasses per lot by the same project worker (lot tag score) and for each incoming lot of cattle by plant personnel (plant lot tag score). Swabs (approximately 10 by 10 cm) were taken from the medial rump and sacrum immediately after hide removal and from the brisket and top of shoulder after carcass splitting. These samples were pooled for each carcass and aerobic mesophilic bacteria, coliforms, and Escherichia coli were enumerated. The lot bacterial count was calculated by averaging the individual bacterial results of the 12 carcasses in a lot. At the HLSP, the lot side scores and the plant lot tag scores were negatively associated (P < 0.05) with the aerobic bacteria, coliforms, and E. coli. Counts were lower when tag was shaven off of the hides or when the line speed was slowed, but the reductions in counts were less than 0.5 log10/cm2. At the SLSP, the lot belly score was negatively associated (P < 0.003) with the aerobic bacterial counts. Neither the lot tag score nor the plant lot tag score were associated (P > 0.05) with the bacterial counts. Surface wetness of the hides was weakly (P < 0.05) associated with coli forms and E. coli counts. This study indicates that there is no consistent association between lot tag scores, plant lot tag scores, and bacterial contamination of carcasses. Changes in bacterial counts when associated with lot tag scores, plant lot tag scores, surface wetness of hides, line speed, or shaving off of tag were generally less than 0.5 log10/cm2. Thus, these variables are individually assessed as control points, but not critical control points of HACCP plans for the prevailing beef slaughter processes (including line speed adjustment at the HLSP) at the two plants studied.

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Matt Blois. "Wacker plans US silicone plant." C&EN Global Enterprise 100, no. 27 (August 8, 2022): 13. http://dx.doi.org/10.1021/cen-10027-buscon8.

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11

Alex Scott. "Topsoe plans largest electrolyzer plant." C&EN Global Enterprise 100, no. 19 (May 30, 2022): 11. http://dx.doi.org/10.1021/cen-10019-buscon12.

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Matt Blois. "Piedmont plans lithium chemical plant." C&EN Global Enterprise 100, no. 32 (September 12, 2022): 10. http://dx.doi.org/10.1021/cen-10032-buscon9.

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Alex Tullo. "Futerro plans French PLA plant." C&EN Global Enterprise 101, no. 1 (January 2, 2023): 10. http://dx.doi.org/10.1021/cen-10101-buscon10.

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14

Spencer-Phillips, Peter. "Phyllopshere Microbiology." Mycological Research 107, no. 7 (July 2003): 895. http://dx.doi.org/10.1017/s0953756203218335.

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15

Wanner, Leslie A., and William W. Kirk. "Streptomyces – from Basic Microbiology to Role as a Plant Pathogen." American Journal of Potato Research 92, no. 2 (March 18, 2015): 236–42. http://dx.doi.org/10.1007/s12230-015-9449-5.

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16

Whipps, J. M., P. Hand, D. Pink, and G. D. Bending. "Phyllosphere microbiology with special reference to diversity and plant genotype." Journal of Applied Microbiology 105, no. 6 (December 2008): 1744–55. http://dx.doi.org/10.1111/j.1365-2672.2008.03906.x.

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17

Montesinos, Emilio. "Plant-associated microorganisms: a view from the scope of microbiology." International Microbiology 6, no. 4 (December 1, 2003): 221–23. http://dx.doi.org/10.1007/s10123-003-0141-0.

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Alex Tullo. "World Energy plans another SAF plant." C&EN Global Enterprise 100, no. 30 (August 29, 2022): 11. http://dx.doi.org/10.1021/cen-10030-buscon7.

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19

Hirsch, Mikeal. "Future planning for capacity in plant pathology." Microbiology Australia 33, no. 1 (2012): 3. http://dx.doi.org/10.1071/ma12003.

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We are all familiar with the three constants of life: death, taxes ? and strategic planning. As professionals, we are frequently getting involved in developing vision statements, strategies for change, action plans, performance indicators, impact metrics, review processes and so on. Strategic planning goes in cycles. At the national level we are now engaged in a new exercise, setting broad directions for the future of rural research and, in particular, biosecurity science. This is likely to impact on the future of professionals in microbiology and beyond. As always with these exercises, it is the ?journey? rather than the ?destination? that is important, as it enables us to take stock and reflect on where we are heading in terms of future capacity. This paper outlines some of these planning activities and earlier findings, with a focus on future capacity in plant pathology, but the lessons apply to all readers of this journal. It is important that members of the Australian Society for Microbiology (ASM) and other professional societies engage in these strategic planning efforts to shape our own future.

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20

Tehrani, Neda, and Raka M. Mitra. "Plant pathogens and symbionts target the plant nucleus." Current Opinion in Microbiology 72 (April 2023): 102284. http://dx.doi.org/10.1016/j.mib.2023.102284.

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21

Hawksworth, David L. "New microbiology texts." Mycological Research 110, no. 12 (December 2006): 1482. http://dx.doi.org/10.1016/j.mycres.2006.11.001.

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22

Zhai, Zhengli, David L. Ehret, Tom Forge, Tom Helmer, Wei Lin, Martine Dorais, and Athanasios P. Papadopoulos. "Organic Fertilizers for Greenhouse Tomatoes: Productivity and Substrate Microbiology." HortScience 44, no. 3 (June 2009): 800–809. http://dx.doi.org/10.21273/hortsci.44.3.800.

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Organic fertilizer regimens consisting of combinations of composts (yard waste, swine manure, or spent mushroom substrate) and liquid fertilizers (fish- or plant-based) were evaluated against conventional hydroponic fertilizers in two experiments with greenhouse tomatoes grown in peat-based substrate. Crop yield and fruit quality were evaluated and several assays of substrate microbial activity and community profiles (fluorescein diacetate analysis and EcoLog, values, nematode counts) were conducted. Crops grown in 20% to 40% compost (yard waste or yard waste plus swine manure) plus a continuously applied liquid source of organic potassium (K), calcium (Ca), magnesium (Mg), and sulphate (SO4) could not be sustained more than 1 month before nutrient deficiencies became visible. Supplementation with a nitrogen (N)- and phosphorus (P)-containing plant-based liquid fertilizer at the point when plant deficiencies became apparent subsequently produced yields ≈80% that of the hydroponic control. In a second experiment, the proportion of mushroom or yard waste compost was increased to 50% of the mix, and liquid delivery of K, Ca, Mg and SO4 plus either plant-based or fish-based N- and P-containing liquid feeds was started at the date of transplanting. In this case, organic yields equal to that of the hydroponic control (8.5 kg/plant) were observed in some treatments. The most productive organic treatment was the mushroom compost supplemented with a low concentration of the plant-based liquid fertilizer. In general, organic tomatoes had a lower postharvest decay index (better shelf life) than did the hydroponic controls, possibly as an indirect consequence of overall reduced yield in those treatments. High concentrations of both organic liquid feeds resulted in lower yields as a result of treatment-induced fusarium crown and root rot. In contrast to some previous studies, those treatments showing fusarium crown and root rot also had the highest gross microbial activity. Measures of gross microbial activity and numbers of microbivorous nematodes were higher (average of 37% and 6.7 times, respectively) in compost/organic feed treatments than in the hydroponic control. Community physiological profiles of the bacterial populations, on the other hand, did not differ between organic and hydroponic treatments. Nematode populations were significantly correlated with gross microbial activity in the organic treatments.

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23

Chumakov, M. I., and E. M. Moiseeva. "Technologies of Agrobacterium plant transformation In planta." Applied Biochemistry and Microbiology 48, no. 8 (November 5, 2012): 657–66. http://dx.doi.org/10.1134/s0003683812080017.

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24

Mitchell, James K., Kathy M. Orsted, and Carl E. Warnes. "Fun Microbiology: Using a Plant Pathogenic Fungus to Demonstrate Koch's Postulates." American Biology Teacher 59, no. 9 (November 1, 1997): 574–77. http://dx.doi.org/10.2307/4450385.

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25

IKEDA, Seishi, Hirohito TSURUMARU, Takashi OKOBO, Kazuyuki OKAZAKI, and Kiwamu MINAMISAWA. "New Waves in Plant Microbiology and Paradigm Shifts of Agricultural Research." KAGAKU TO SEIBUTSU 51, no. 7 (2013): 462–70. http://dx.doi.org/10.1271/kagakutoseibutsu.51.462.

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26

Hayward, A. C., N. Fegan, M. Fegan, and G. R. Stirling. "StenotrophomonasandLysobacter: ubiquitous plant-associatedgamma-proteobacteria of developing significance in applied microbiology." Journal of Applied Microbiology 108, no. 3 (March 2010): 756–70. http://dx.doi.org/10.1111/j.1365-2672.2009.04471.x.

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27

Doan, Hung K., and Johan H. J. Leveau. "Artificial Surfaces in Phyllosphere Microbiology." Phytopathology® 105, no. 8 (August 2015): 1036–42. http://dx.doi.org/10.1094/phyto-02-15-0050-rvw.

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The study of microorganisms that reside on plant leaf surfaces, or phyllosphere microbiology, greatly benefits from the availability of artificial surfaces that mimic in one or more ways the complexity of foliage as a microbial habitat. These leaf surface proxies range from very simple, such as nutrient agars that can reveal the metabolic versatility or antagonistic properties of leaf-associated microorganisms, to the very complex, such as silicon-based casts that replicate leaf surface topography down to nanometer resolution. In this review, we summarize the various uses of artificial surfaces in experimental phyllosphere microbiology and discuss how these have advanced our understanding of the biology of leaf-associated microorganisms and the habitat they live in. We also provide an outlook into future uses of artificial leaf surfaces, foretelling a greater role for microfluidics to introduce biological and chemical gradients into artificial leaf environments, stressing the importance of artificial surfaces to generate quantitative data that support computational models of microbial life on real leaves, and rethinking the leaf surface (‘phyllosphere’) as a habitat that features two intimately connected but very different compartments, i.e., the leaf surface landscape (‘phylloplane’) and the leaf surface waterscape (‘phyllotelma’).

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28

E., Montesinos, Bonaterra A., Badosa E., Francés J., Alemany J., Llorente I., and Moragrega C. "Plant-microbe interactions and the new biotechnological methods of plant disease control." International Microbiology 5, no. 4 (December 1, 2002): 169–75. http://dx.doi.org/10.1007/s10123-002-0085-9.

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29

Rick Mullin. "Evonik plans $220 million US lipids plant." C&EN Global Enterprise 100, no. 21 (June 13, 2022): 10. http://dx.doi.org/10.1021/cen-10021-buscon1.

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30

Gleeson, Deirdre, and James Baldini. "Society for General Microbiology 154th Meeting. Joint Environmental Microbiology Group and the British Mycological Society session, Bath, March 31-April 1 2004." Mycologist 18, no. 4 (November 2004): 169. http://dx.doi.org/10.1016/s0269-915x(07)60047-0.

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31

Choi, Kihyuck, Raees Khan, and Seon-Woo Lee. "Dissection of plant microbiota and plant-microbiome interactions." Journal of Microbiology 59, no. 3 (February 23, 2021): 281–91. http://dx.doi.org/10.1007/s12275-021-0619-5.

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32

Martínez-Romero, Esperanza, José Luis Aguirre-Noyola, Nataly Taco-Taype, Julio Martínez-Romero, and Doris Zuñiga-Dávila. "Plant microbiota modified by plant domestication." Systematic and Applied Microbiology 43, no. 5 (September 2020): 126106. http://dx.doi.org/10.1016/j.syapm.2020.126106.

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33

Lugtenberg, Ben, and Faina Kamilova. "Plant-Growth-Promoting Rhizobacteria." Annual Review of Microbiology 63, no. 1 (October 2009): 541–56. http://dx.doi.org/10.1146/annurev.micro.62.081307.162918.

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34

KANESHIRO, EDNA S. "Is Pneumocystis a Plant?" Journal of Eukaryotic Microbiology 49, no. 5 (September 2002): 367–73. http://dx.doi.org/10.1111/j.1550-7408.2002.tb00214.x.

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35

Fagorzi, Camilla, and Alessio Mengoni. "Endophytes: Improving Plant Performance." Microorganisms 10, no. 9 (September 3, 2022): 1777. http://dx.doi.org/10.3390/microorganisms10091777.

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Endophytes represent microorganisms that reside within plant tissues, without typically causing adverse effects to the plants, for a substantial part of their life cycle, and are primarily known for their beneficial role to their host plant [...]

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36

Narváez-Barragán, Delia A., Omar E. Tovar-Herrera, Lorenzo Segovia, Mario Serrano, and Claudia Martinez-Anaya. "Expansin-related proteins: biology, microbe–plant interactions and associated plant-defense responses." Microbiology 166, no. 11 (December 1, 2020): 1007–18. http://dx.doi.org/10.1099/mic.0.000984.

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Expansins, cerato-platanins and swollenins (which we will henceforth refer to as expansin-related proteins) are a group of microbial proteins involved in microbe-plant interactions. Although they share very low sequence similarity, some of their composing domains are near-identical at the structural level. Expansin-related proteins have their target in the plant cell wall, in which they act through a non-enzymatic, but still uncharacterized, mechanism. In most cases, mutagenesis of expansin-related genes affects plant colonization or plant pathogenesis of different bacterial and fungal species, and thus, in many cases they are considered virulence factors. Additionally, plant treatment with expansin-related proteins activate several plant defenses resulting in the priming and protection towards subsequent pathogen encounters. Plant-defence responses induced by these proteins are reminiscent of pattern-triggered immunity or hypersensitive response in some cases. Plant immunity to expansin-related proteins could be caused by the following: (i) protein detection by specific host-cell receptors, (ii) alterations to the cell-wall-barrier properties sensed by the host, (iii) displacement of cell-wall polysaccharides detected by the host. Expansin-related proteins may also target polysaccharides on the wall of the microbes that produced them under certain physiological instances. Here, we review biochemical, evolutionary and biological aspects of these relatively understudied proteins and different immune responses they induce in plant hosts.

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37

Remus-Emsermann, Mitja N. P., and Rudolf O. Schlechter. "Phyllosphere microbiology: at the interface between microbial individuals and the plant host." New Phytologist 218, no. 4 (March 5, 2018): 1327–33. http://dx.doi.org/10.1111/nph.15054.

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38

Hsiang, Tom, and Paul H. Goodwin. "Distinguishing plant and fungal sequences in ESTs from infected plant tissues." Journal of Microbiological Methods 54, no. 3 (September 2003): 339–51. http://dx.doi.org/10.1016/s0167-7012(03)00067-8.

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39

Kandar, Mamat, Sony Suhandono, and I. Nyoman Pugeg Aryantha. "Growth Promotion of Rice Plant by Endophytic Fungi." Journal of Pure and Applied Microbiology 12, no. 3 (September 30, 2018): 1569–77. http://dx.doi.org/10.22207/jpam.12.3.62.

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40

Alex Scott. "UK firm plans Li-ion battery recycling plant." C&EN Global Enterprise 100, no. 6 (February 14, 2022): 10. http://dx.doi.org/10.1021/cen-10006-buscon10.

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41

Birch, A. Nicholas E., Walter M. Robertson, and Linda E. Fellows. "Plant products to control plant parasitic nematodes." Pesticide Science 39, no. 2 (1993): 141–45. http://dx.doi.org/10.1002/ps.2780390207.

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42

Campbell, R., and B. N. Richards. "The Microbiology of Terrestrial Ecosystems." Journal of Ecology 75, no. 4 (December 1987): 1211. http://dx.doi.org/10.2307/2260337.

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43

Roossinck, Marilyn J. "Plant RNA virus evolution." Current Opinion in Microbiology 6, no. 4 (August 2003): 406–9. http://dx.doi.org/10.1016/s1369-5274(03)00087-0.

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44

Dodd, J. C. "The Role of Arbuscular Mycorrhizal Fungi in Agro- and Natural Ecosystems." Outlook on Agriculture 29, no. 1 (March 2000): 55–62. http://dx.doi.org/10.5367/000000000101293059.

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Symbionts called ‘mycorrhizal fungi’ occur in most biomes on earth, and are a fundamental reason for plant growth and development on the planet. The most common group of mycorrhizal fungi is that of the arbuscular mycorrhizal fungi (AMF), which colonize the roots of over 80% of land plant families, but they cannot as yet be cultured away from the host plant. AMF are primarily responsible for nutrient transfer from soil to plant, but have other roles such as soil aggregation, protection of plants against drought stress and soil pathogens, and increasing plant diversity. This is achieved by the growth of their fungal mycelium within a host root and out into the soil beyond. There is an urgent need to study the below-ground microbiology of soils in agro-and natural ecosystems, as AMF are pivotal in closing nutrient cycles and have a proven multifunctional role in soil–plant interactions. More information is also needed on the biodiversity and functional diversity of these microbes and their interactions with crops and plants.

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45

Liot, F., A. Colin, and S. Mabeau. "Microbiology and storage life of fresh edible seaweeds." Journal of Applied Phycology 5, no. 2 (April 1993): 243–47. http://dx.doi.org/10.1007/bf00004025.

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46

Santoyo, Gustavo, Gabriel Moreno-Hagelsieb, Ma del Carmen Orozco-Mosqueda, and Bernard R. Glick. "Plant growth-promoting bacterial endophytes." Microbiological Research 183 (February 2016): 92–99. http://dx.doi.org/10.1016/j.micres.2015.11.008.

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47

Bever, James D., Thomas G. Platt, and Elise R. Morton. "Microbial Population and Community Dynamics on Plant Roots and Their Feedbacks on Plant Communities." Annual Review of Microbiology 66, no. 1 (October 13, 2012): 265–83. http://dx.doi.org/10.1146/annurev-micro-092611-150107.

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48

Makino, Ayaka, Ryosuke Nakai, Yasuko Yoneda, Tadashi Toyama, Yasuhiro Tanaka, Xian-Ying Meng, Kazuhiro Mori, et al. "Isolation of Aquatic Plant Growth-Promoting Bacteria for the Floating Plant Duckweed (Lemna minor)." Microorganisms 10, no. 8 (August 3, 2022): 1564. http://dx.doi.org/10.3390/microorganisms10081564.

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Plant growth-promoting bacteria (PGPB) can exert beneficial growth effects on their host plants. Little is known about the phylogeny and growth-promoting mechanisms of PGPB associated with aquatic plants, although those of terrestrial PGPB have been well-studied. Here, we report four novel aquatic PGPB strains, MRB1–4 (NITE P-01645–P-01648), for duckweed Lemna minor from our rhizobacterial collection isolated from Lythrum anceps. The number of L. minor fronds during 14 days co-culture with the strains MRB1–4 increased by 2.1–3.8-fold, compared with an uninoculated control; the plant biomass and chlorophyll content in co-cultures also increased. Moreover, all strains possessed an indole-3-acetic acid production trait in common with a plant growth-promoting trait of terrestrial PGPB. Phylogenetic analysis showed that three strains, MRB-1, -3, and -4, were affiliated with known proteobacterial genera (Bradyrhizobium and Pelomonas); this report is the first to describe a plant-growth promoting activity of Pelomonas members. The gammaproteobacterial strain MRB2 was suggested to be phylogenetically novel at the genus level. Under microscopic observation, the Pelomonas strain MRB3 was epiphytic and adhered to both the root surfaces and fronds of duckweed. The duckweed PGPB obtained here could serve as a new model for understanding unforeseen mechanisms behind aquatic plant-microbe interactions.

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49

Illg, Rolf Dieter. "Plant tissue culture techniques." Memórias do Instituto Oswaldo Cruz 86, suppl 2 (1991): 21–24. http://dx.doi.org/10.1590/s0074-02761991000600008.

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Vargas, Vera M. F., Régis R. Guidobono, and João A. P. Henriques. "Genotoxicity of plant extracts." Memórias do Instituto Oswaldo Cruz 86, suppl 2 (1991): 67–70. http://dx.doi.org/10.1590/s0074-02761991000600017.

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Journal articles on the topic 'Plant microbiology'

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