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1

Bininda-Emonds, Olaf R. P., ed. Phylogenetic Supertrees. Dordrecht: Springer Netherlands, 2004. http://dx.doi.org/10.1007/978-1-4020-2330-9.

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2

Scherson, Rosa A., and Daniel P. Faith, eds. Phylogenetic Diversity. Cham: Springer International Publishing, 2018. http://dx.doi.org/10.1007/978-3-319-93145-6.

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3

Wiley, E. O., and Bruce S. Lieberman. Phylogenetics. Hoboken, NJ, USA: John Wiley & Sons, Inc., 2011. http://dx.doi.org/10.1002/9781118017883.

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4

Lemey, Philippe, Marco Salemi, and Anne-Mieke Vandamme, eds. The Phylogenetic Handbook. Cambridge: Cambridge University Press, 2009. http://dx.doi.org/10.1017/cbo9780511819049.

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5

Basic phylogenetic combinatorics. New York: Cambridge University Press, 2011.

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6

Inc, ebrary, ed. Phylogenetics: Theory and practice of phylogenetics systematics. 2nd ed. Hoboken, N.J: Wiley-Blackwell, 2011.

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7

Mendoza Straffon, Larissa, ed. Cultural Phylogenetics. Cham: Springer International Publishing, 2016. http://dx.doi.org/10.1007/978-3-319-25928-4.

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8

Bakker, Peter, Finn Borchsenius, Carsten Levisen, and Eeva Sippola, eds. Creole Studies – Phylogenetic Approaches. Amsterdam: John Benjamins Publishing Company, 2017. http://dx.doi.org/10.1075/z.211.

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9

Wägele, Johann Wolfgang. Foundations of phylogenetic systematics. München: Pfeil, 2005.

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10

1968-, Salemi Marco, Vandamme Anne-Mieke 1960-, and Lemey Philippe, eds. The phylogenetic handbook: A practical approach to phylogenetic analysis and hypothesis testing. 2nd ed. Cambridge, UK: Cambridge University Press, 2009.

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11

1968-, Salemi Marco, Vandamme Anne-Mieke 1960-, and Lemey Philippe, eds. The phylogenetic handbook: A practical approach to phylogenetic analysis and hypothesis testing. 2nd ed. Cambridge, UK: Cambridge University Press, 2009.

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12

Warnow, Tandy, ed. Bioinformatics and Phylogenetics. Cham: Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-10837-3.

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13

Jennings, W. Bryan. Phylogenomic Data Acquisition. Boca Raton: Taylor & Francis, 2017.: CRC Press, 2016. http://dx.doi.org/10.1201/9781315181431.

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14

W, Martin Joel, Crandall Keith A, and Felder Darryl L, eds. Decapod crustacean phylogenetics. Boca Raton: Taylor & Francis, 2009.

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15

C, Holmes Edward, ed. Molecular evolution: A phylogenetic approach. Oxford: Blackwell Science, 1998.

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16

Bickel, David R. Phylogenetic Trees and Molecular Evolution. Cham: Springer International Publishing, 2022. http://dx.doi.org/10.1007/978-3-031-11958-3.

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17

Williams, David, Michael Schmitt, and Quentin Wheeler, eds. The Future of Phylogenetic Systematics. Cambridge: Cambridge University Press, 2016. http://dx.doi.org/10.1017/cbo9781316338797.

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18

Kluge, Nikita. The Phylogenetic System of Ephemeroptera. Dordrecht: Springer Netherlands, 2004. http://dx.doi.org/10.1007/978-94-007-0872-3.

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19

Pellens, Roseli, and Philippe Grandcolas, eds. Biodiversity Conservation and Phylogenetic Systematics. Cham: Springer International Publishing, 2016. http://dx.doi.org/10.1007/978-3-319-22461-9.

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20

M, Miyamoto Michael, and Cracraft Joel, eds. Phylogenetic analysis of DNA sequences. New York: Oxford University Press, 1991.

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21

Kli͡uge, N. I͡U. The phylogenetic system of Ephemeroptera. Dodrecht: Kluwer Academic, 2004.

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22

S, Judd Walter, ed. Plant systematics: A phylogenetic approach. 3rd ed. Sunderland, MA: Sinauer Associates, Inc., 2007.

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23

J, Wiens John, ed. Phylogenetic analysis of morphological data. Washington, D.C: Smithsonian Institution Press, 2000.

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24

Wiley, E. O., and Bruce S. Lieberman. Phylogenetics: Theory and Practice of Phylogenetic Systematics. Wiley & Sons, Incorporated, John, 2011.

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25

Nairn, Campbell Joseph. Small subunit ribosomal RNA sequences from Ginkgo biloba and phylogentic inferences from seed plant small subunit ribosomal RNA data. 1990.

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26

WILEY. Phylogenetics: The Theory and Practice of Phylogenetic Systematics, Second Edition. John Wiley & Sons Inc, 2007.

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27

Hennig, Willi, Rainer Zangerl, and D. Dwight Davis. Phylogenetic Systematics. University of Illinois Press, 1999.

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28

Lipscomb, Diana. Phylogenetic Systematics. Elsevier Science & Technology Books, 2019.

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29

Collin, Rachel, and Amy Moran, eds. Evolutionary Transitions in Mode of Development. Oxford University Press, 2018. http://dx.doi.org/10.1093/oso/9780198786962.003.0004.

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In the large body of literature on ecological and evolutionary mechanisms underlying transitions between planktotrophy and lecithotrophy, the focus has typically covered long evolutionary timescales; that is, evolution of complex larval traits is generally discussed in the context of phylogenetic patterns detectable at the level of families, classes, or phyla. An analytical approach incorporating comparative phylogenetics is increasingly used to address these long-view questions. Here, we discuss what has been learned from taking a comparative phylogenetic approach and the limitations of this approach. We propose that approaches based on a closer view—that is, analyses that focus on genetic, morphological, and functional variation among individuals, populations, or closely related congeners—have greater potential to answer questions about mechanisms underlying the loss and regain of major complex characters such as feeding larvae.
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30

Abdurakhmonov, Ibrokhim Y., ed. Phylogenetics. InTech, 2017. http://dx.doi.org/10.5772/63115.

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31

Goloboff, Pablo A. Refining Phylogenetic Analyses. Taylor & Francis Group, 2022.

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32

The Phylogenetic Handbook. Cambridge University Press, 2008.

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33

Spillner, Andreas, Andreas Dress, Katharina T. Huber, Jacobus Koolen, and Vincent Moulton. Basic Phylogenetic Combinatorics. Cambridge University Press, 2011.

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34

Spillner, Andreas, Andreas Dress, Katharina T. Huber, Jacobus Koolen, and Vincent Moulton. Basic Phylogenetic Combinatorics. Cambridge University Press, 2012.

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35

Spillner, Andreas, Andreas Dress, Katharina T. Huber, Jacobus Koolen, and Vincent Moulton. Basic Phylogenetic Combinatorics. Cambridge University Press, 2012.

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36

Goloboff, Pablo A. Refining Phylogenetic Analyses : Phylogenetic Analysis of Morphological Data: Volume 2. Taylor & Francis Group, 2022.

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37

Goloboff, Pablo A. Refining Phylogenetic Analyses : Phylogenetic Analysis of Morphological Data: Volume 2. Taylor & Francis Group, 2022.

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38

Goloboff, Pablo A. Refining Phylogenetic Analyses : Phylogenetic Analysis of Morphological Data: Volume 2. Taylor & Francis Group, 2022.

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39

Huelsenbeck. Stastical Phylogenetics. Sinauer Associates Inc, 2008.

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40

Lemey, Philippe. Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing. Cambridge University Press, 2009.

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41

Goloboff, Pablo A. From Observations to Optimal Phylogenetic Trees: Phylogenetic Analysis of Morphological Data. CRC Press LLC, 2022.

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42

Salemi, Marco, Philippe Lemey, and Anne-Mieke Vandamme. Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing. Cambridge University Press, 2012.

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43

Salemi, Marco, Philippe Lemey, and Anne-Mieke Vandamme. Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing. Cambridge University Press, 2009.

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44

Goloboff, Pablo A. From Observations to Optimal Phylogenetic Trees: Phylogenetic Analysis of Morphological Data. CRC Press LLC, 2022.

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45

Phylogenetic and biochemical perspectives. Elsevier, 1991. http://dx.doi.org/10.1016/c2009-0-01031-9.

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46

Hamilton, Andrew, ed. Evolution of Phylogenetic Systematics. University of California Press, 2013. http://dx.doi.org/10.1525/california/9780520276581.001.0001.

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47

Hamilton, Andrew. Evolution of Phylogenetic Systematics. University of California Press, 2013.

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48

Phylogenetic Tree of Life. ETC Montessori, 2022.

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49

Hamilton, Andrew. Evolution of Phylogenetic Systematics. University of California Press, 2013.

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50

Kluge, Nikita. Phylogenetic System of Ephemeroptera. Springer, 2013.

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