Journal articles on the topic 'Pathogen adaptation'
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Fonville, Judith M. "Expected Effect of Deleterious Mutations on Within-Host Adaptation of Pathogens." Journal of Virology 89, no. 18 (June 24, 2015): 9242–51. http://dx.doi.org/10.1128/jvi.00832-15.
Sánchez-Vallet, Andrea, Simone Fouché, Isabelle Fudal, Fanny E. Hartmann, Jessica L. Soyer, Aurélien Tellier, and Daniel Croll. "The Genome Biology of Effector Gene Evolution in Filamentous Plant Pathogens." Annual Review of Phytopathology 56, no. 1 (August 25, 2018): 21–40. http://dx.doi.org/10.1146/annurev-phyto-080516-035303.
VanHook, Annalisa M. "Pathogen rewiring for host adaptation." Science 370, no. 6517 (November 5, 2020): 677.20–679. http://dx.doi.org/10.1126/science.370.6517.677-t.
Slev, Patricia R., and Wayne K. Potts. "Disease consequences of pathogen adaptation." Current Opinion in Immunology 14, no. 5 (October 2002): 609–14. http://dx.doi.org/10.1016/s0952-7915(02)00381-3.
Laine, Anna-Liisa, Jeremy J. Burdon, Adnane Nemri, and Peter H. Thrall. "Host ecotype generates evolutionary and epidemiological divergence across a pathogen metapopulation." Proceedings of the Royal Society B: Biological Sciences 281, no. 1787 (July 22, 2014): 20140522. http://dx.doi.org/10.1098/rspb.2014.0522.
Hanford, Hannah E., Juanita Von Dwingelo, and Yousef Abu Kwaik. "Bacterial nucleomodulins: A coevolutionary adaptation to the eukaryotic command center." PLOS Pathogens 17, no. 1 (January 21, 2021): e1009184. http://dx.doi.org/10.1371/journal.ppat.1009184.
Fedderke, Johannes W., Robert E. Klitgaard, and Valerio Napolioni. "Genetic adaptation to historical pathogen burdens." Infection, Genetics and Evolution 54 (October 2017): 299–307. http://dx.doi.org/10.1016/j.meegid.2017.07.017.
TASARA, T., and R. STEPHAN. "Cold Stress Tolerance of Listeria monocytogenes: A Review of Molecular Adaptive Mechanisms and Food Safety Implications." Journal of Food Protection 69, no. 6 (June 1, 2006): 1473–84. http://dx.doi.org/10.4315/0362-028x-69.6.1473.
Henschen, Amberleigh E., Michal Vinkler, Marissa M. Langager, Allison A. Rowley, Rami A. Dalloul, Dana M. Hawley, and James S. Adelman. "Rapid adaptation to a novel pathogen through disease tolerance in a wild songbird." PLOS Pathogens 19, no. 6 (June 9, 2023): e1011408. http://dx.doi.org/10.1371/journal.ppat.1011408.
Hoque, M. Mozammel, Parisa Noorian, Gustavo Espinoza-Vergara, Pradeep Manuneedhi Cholan, Mikael Kim, Md Hafizur Rahman, Maurizio Labbate, et al. "Adaptation to an amoeba host drives selection of virulence-associated traits in Vibrio cholerae." ISME Journal 16, no. 3 (October 15, 2021): 856–67. http://dx.doi.org/10.1038/s41396-021-01134-2.
Bidochka, Michael J., Susan Burke, and Luna Ng. "Extracellular hydrolytic enzymes in the fungal genus Verticillium: adaptations for pathogenesis." Canadian Journal of Microbiology 45, no. 10 (October 1, 1999): 856–64. http://dx.doi.org/10.1139/w99-085.
Wu, E.-Jiao, Yan-Ping Wang, Li-Na Yang, Mi-Zhen Zhao, and Jiasui Zhan. "Elevating Air Temperature may Enhance Future Epidemic Risk of the Plant Pathogen Phytophthora infestans." Journal of Fungi 8, no. 8 (July 30, 2022): 808. http://dx.doi.org/10.3390/jof8080808.
Mayer, Andreas, Thierry Mora, Olivier Rivoire, and Aleksandra M. Walczak. "Diversity of immune strategies explained by adaptation to pathogen statistics." Proceedings of the National Academy of Sciences 113, no. 31 (July 18, 2016): 8630–35. http://dx.doi.org/10.1073/pnas.1600663113.
Dutta, Anik, Fanny E. Hartmann, Carolina Sardinha Francisco, Bruce A. McDonald, and Daniel Croll. "Mapping the adaptive landscape of a major agricultural pathogen reveals evolutionary constraints across heterogeneous environments." ISME Journal 15, no. 5 (January 15, 2021): 1402–19. http://dx.doi.org/10.1038/s41396-020-00859-w.
Lloyd-Smith, James O. "Vacated niches, competitive release and the community ecology of pathogen eradication." Philosophical Transactions of the Royal Society B: Biological Sciences 368, no. 1623 (August 5, 2013): 20120150. http://dx.doi.org/10.1098/rstb.2012.0150.
Råberg, Lars. "Human and pathogen genotype-by-genotype interactions in the light of coevolution theory." PLOS Genetics 19, no. 4 (April 6, 2023): e1010685. http://dx.doi.org/10.1371/journal.pgen.1010685.
Cory, Jenny S., and Judith H. Myers. "Adaptation in an insect host-plant pathogen interaction." Ecology Letters 7, no. 8 (August 2004): 632–39. http://dx.doi.org/10.1111/j.1461-0248.2004.00617.x.
Koelle, Katia, Mercedes Pascual, and Md Yunus. "Pathogen adaptation to seasonal forcing and climate change." Proceedings of the Royal Society B: Biological Sciences 272, no. 1566 (May 7, 2005): 971–77. http://dx.doi.org/10.1098/rspb.2004.3043.
van Boven, Michiel, Frits R. Mooi, Joop F. P. Schellekens, Hester E. de Melker, and Mirjam Kretzschmar. "Pathogen adaptation under imperfect vaccination: implications for pertussis." Proceedings of the Royal Society B: Biological Sciences 272, no. 1572 (July 6, 2005): 1617–24. http://dx.doi.org/10.1098/rspb.2005.3108.
Bourget, Romain, Loïc Chaumont, and Natalia Sapoukhina. "Timing of Pathogen Adaptation to a Multicomponent Treatment." PLoS ONE 8, no. 8 (August 21, 2013): e71926. http://dx.doi.org/10.1371/journal.pone.0071926.
Harkins, Kelly M., and Anne C. Stone. "Ancient pathogen genomics: insights into timing and adaptation." Journal of Human Evolution 79 (February 2015): 137–49. http://dx.doi.org/10.1016/j.jhevol.2014.11.002.
ZHAN, JIASUI, and BRUCE A. McDONALD. "Thermal adaptation in the fungal pathogen Mycosphaerella graminicola." Molecular Ecology 20, no. 8 (March 14, 2011): 1689–701. http://dx.doi.org/10.1111/j.1365-294x.2011.05023.x.
Langridge, Gemma C., Maria Fookes, Thomas R. Connor, Theresa Feltwell, Nicholas Feasey, Bryony N. Parsons, Helena M. B. Seth-Smith, et al. "Patterns of genome evolution that have accompanied host adaptation inSalmonella." Proceedings of the National Academy of Sciences 112, no. 3 (December 22, 2014): 863–68. http://dx.doi.org/10.1073/pnas.1416707112.
Wang, Liyuan, Han Chen, JiangJiang Li, Haidong Shu, Xiangxue Zhang, Yuanchao Wang, Brett M. Tyler, and Suomeng Dong. "Effector gene silencing mediated by histone methylation underpins host adaptation in an oomycete plant pathogen." Nucleic Acids Research 48, no. 4 (December 10, 2019): 1790–99. http://dx.doi.org/10.1093/nar/gkz1160.
Sacristán, Soledad, Aurora Fraile, José M. Malpica, and Fernando García-Arenal. "An Analysis of Host Adaptation and Its Relationship with Virulence in Cucumber mosaic virus." Phytopathology® 95, no. 7 (July 2005): 827–33. http://dx.doi.org/10.1094/phyto-95-0827.
Dawidziuk, A., G. Koczyk, and D. Popiel. "Adaptation and response to mycotoxin presence in pathogen-pathogen interactions within the Fusarium genus." World Mycotoxin Journal 9, no. 4 (October 24, 2016): 565–75. http://dx.doi.org/10.3920/wmj2015.2010.
Précigout, Pierre-Antoine, Corinne Robert, and David Claessen. "Adaptation of Biotrophic Leaf Pathogens to Fertilization-Mediated Changes in Plant Traits: A Comparison of the Optimization Principle to Invasion Fitness." Phytopathology® 110, no. 5 (May 2020): 1039–48. http://dx.doi.org/10.1094/phyto-08-19-0317-r.
Baxter, Laura, Sucheta Tripathy, Naveed Ishaque, Nico Boot, Adriana Cabral, Eric Kemen, Marco Thines, et al. "Signatures of Adaptation to Obligate Biotrophy in the Hyaloperonospora arabidopsidis Genome." Science 330, no. 6010 (December 9, 2010): 1549–51. http://dx.doi.org/10.1126/science.1195203.
Goel, Ajay K., Derek Lundberg, Miguel A. Torres, Ryan Matthews, Chiharu Akimoto-Tomiyama, Lisa Farmer, Jeffery L. Dangl, and Sarah R. Grant. "The Pseudomonas syringae Type III Effector HopAM1 Enhances Virulence on Water-Stressed Plants." Molecular Plant-Microbe Interactions® 21, no. 3 (March 2008): 361–70. http://dx.doi.org/10.1094/mpmi-21-3-0361.
Keon, John, John Antoniw, Raffaella Carzaniga, Siân Deller, Jane L. Ward, John M. Baker, Michael H. Beale, Kim Hammond-Kosack, and Jason J. Rudd. "Transcriptional Adaptation of Mycosphaerella graminicola to Programmed Cell Death (PCD) of Its Susceptible Wheat Host." Molecular Plant-Microbe Interactions® 20, no. 2 (February 2007): 178–93. http://dx.doi.org/10.1094/mpmi-20-2-0178.
Ginger, Michael, and Mark C. Field. "Making the pathogen: Evolution and adaptation in parasitic protists." Molecular and Biochemical Parasitology 209, no. 1-2 (September 2016): 1–2. http://dx.doi.org/10.1016/j.molbiopara.2016.11.002.
Zhabokritsky, Alice, Meherzad Kutky, Lydia A. Burns, Rajita A. Karran, and Katalin A. Hudak. "RNA toxins: mediators of stress adaptation and pathogen defense." Wiley Interdisciplinary Reviews: RNA 2, no. 6 (August 1, 2011): 890–903. http://dx.doi.org/10.1002/wrna.99.
Bauer, Michael, Sebastian Weis, Mihai G. Netea, and Reinhard Wetzker. "Remembering Pathogen Dose: Long-Term Adaptation in Innate Immunity." Trends in Immunology 39, no. 6 (June 2018): 438–45. http://dx.doi.org/10.1016/j.it.2018.04.001.
Fones, H. N., H. McCurrach, A. Mithani, J. A. C. Smith, and G. M. Preston. "Local adaptation is associated with zinc tolerance in Pseudomonas endophytes of the metal-hyperaccumulator plant Noccaea caerulescens." Proceedings of the Royal Society B: Biological Sciences 283, no. 1830 (May 11, 2016): 20160648. http://dx.doi.org/10.1098/rspb.2016.0648.
Dutta, Anik, Bruce A. McDonald, and Daniel Croll. "Combined reference-free and multi-reference based GWAS uncover cryptic variation underlying rapid adaptation in a fungal plant pathogen." PLOS Pathogens 19, no. 11 (November 16, 2023): e1011801. http://dx.doi.org/10.1371/journal.ppat.1011801.
Kupfer, Tom R., and Daniel M. T. Fessler. "Ectoparasite defence in humans: relationships to pathogen avoidance and clinical implications." Philosophical Transactions of the Royal Society B: Biological Sciences 373, no. 1751 (June 4, 2018): 20170207. http://dx.doi.org/10.1098/rstb.2017.0207.
TINSLEY, M. C., S. BLANFORD, and F. M. JIGGINS. "Genetic variation in Drosophila melanogaster pathogen susceptibility." Parasitology 132, no. 6 (February 24, 2006): 767–73. http://dx.doi.org/10.1017/s0031182006009929.
Geoghegan, Jemma L., Alistair M. Senior, and Edward C. Holmes. "Pathogen population bottlenecks and adaptive landscapes: overcoming the barriers to disease emergence." Proceedings of the Royal Society B: Biological Sciences 283, no. 1837 (August 31, 2016): 20160727. http://dx.doi.org/10.1098/rspb.2016.0727.
Wendling, Carolin C., and K. Mathias Wegner. "Adaptation to enemy shifts: rapid resistance evolution to local Vibrio spp. in invasive Pacific oysters." Proceedings of the Royal Society B: Biological Sciences 282, no. 1804 (April 7, 2015): 20142244. http://dx.doi.org/10.1098/rspb.2014.2244.
Dhillon, Braham, Nicolas Feau, Andrea L. Aerts, Stéphanie Beauseigle, Louis Bernier, Alex Copeland, Adam Foster, et al. "Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen." Proceedings of the National Academy of Sciences 112, no. 11 (March 2, 2015): 3451–56. http://dx.doi.org/10.1073/pnas.1424293112.
Liu, Wei, Shu-Hui Yu, Hong-Ping Zhang, Zuo-Yi Fu, Jia-Qi An, Jin-Yang Zhang, and Pu Yang. "Two Cladosporium Fungi with Opposite Functions to the Chinese White Wax Scale Insect Have Different Genome Characters." Journal of Fungi 8, no. 3 (March 11, 2022): 286. http://dx.doi.org/10.3390/jof8030286.
Gutiérrez, Saray, Julia Fischer, Raja Ganesan, Nina Judith Hos, Gökhan Cildir, Martina Wolke, Alberto Pessia, et al. "Salmonella Typhimurium impairs glycolysis-mediated acidification of phagosomes to evade macrophage defense." PLOS Pathogens 17, no. 9 (September 23, 2021): e1009943. http://dx.doi.org/10.1371/journal.ppat.1009943.
Taliadoros, Demetris, Alice Feurtey, Nathan Wyatt, Benoit Barrès, Pierre Gladieux, Timothy Friesen, and Eva H. Stukenbrock. "Emergence and spread of the barley net blotch pathogen coincided with crop domestication and cultivation history." PLOS Genetics 20, no. 1 (January 29, 2024): e1010884. http://dx.doi.org/10.1371/journal.pgen.1010884.
Levy, Hila, Steven R. Fiddaman, Juliana A. Vianna, Daly Noll, Gemma V. Clucas, Jasmine K. H. Sidhu, Michael J. Polito, et al. "Evidence of Pathogen-Induced Immunogenetic Selection across the Large Geographic Range of a Wild Seabird." Molecular Biology and Evolution 37, no. 6 (February 25, 2020): 1708–26. http://dx.doi.org/10.1093/molbev/msaa040.
LAINE, A. L. "Spatial scale of local adaptation in a plant-pathogen metapopulation." Journal of Evolutionary Biology 18, no. 4 (July 2005): 930–38. http://dx.doi.org/10.1111/j.1420-9101.2005.00933.x.
Ultee, Annemieke, Edwin P. W. Kets, Mark Alberda, Folkert A. Hoekstra, and Eddy J. Smid. "Adaptation of the food-borne pathogen Bacillus cereus to carvacrol." Archives of Microbiology 174, no. 4 (September 25, 2000): 233–38. http://dx.doi.org/10.1007/s002030000199.
Bernier, Steve P., Matthew L. Workentine, and Michael G. Surette. "Genetic signature of bacterial pathogen adaptation during chronic pulmonary infections." Nature Genetics 46, no. 1 (December 27, 2013): 5–6. http://dx.doi.org/10.1038/ng.2859.
Siddle, Katherine J., and Lluis Quintana-Murci. "The Red Queen's long race: human adaptation to pathogen pressure." Current Opinion in Genetics & Development 29 (December 2014): 31–38. http://dx.doi.org/10.1016/j.gde.2014.07.004.
Nair, Tripti, Brandy Weathers, Nicole Stuhr, James Nhan, Vandita Gorla, and Sean Curran. "PATHOGEN APATHY RESULTING FROM SKN-1 ACTIVATION: A MARK OF RESILIENCE OR A RATTLED GUT FEELING?" Innovation in Aging 7, Supplement_1 (December 1, 2023): 1094. http://dx.doi.org/10.1093/geroni/igad104.3514.
Mourkas, Evangelos, Aidan J. Taylor, Guillaume Méric, Sion C. Bayliss, Ben Pascoe, Leonardos Mageiros, Jessica K. Calland, et al. "Agricultural intensification and the evolution of host specialism in the enteric pathogen Campylobacter jejuni." Proceedings of the National Academy of Sciences 117, no. 20 (May 4, 2020): 11018–28. http://dx.doi.org/10.1073/pnas.1917168117.