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Dissertations / Theses on the topic 'Molecular typing'

Author: Grafiati

Published: 4 June 2021

Last updated: 25 July 2025

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1

Al, Qurashi Yasir Mohammed A. "Molecular typing of adenoviruses." Thesis, University of Manchester, 2009. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.506268.

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2

Patel, Sushil. "Molecular typing and identification of mycobacteria." Thesis, University of London, 1999. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.300635.

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3

Desai, Meeta. "Molecular epidemiological typing of Streptococcus pyogenes." Thesis, Open University, 1999. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.299021.

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4

Ngan, Chi-shing, and 顏志成. "Rapid typing of mycobacterium tuberculosis in respiratory specimens using PCR-based mycobacterial interspersed repetitive units (MIRU)typing." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2009. http://hub.hku.hk/bib/B4378334X.

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5

Matsheka, Maitshwarelo Ignatius. "Molecular identification and typing of campylobacter concisus." Doctoral thesis, University of Cape Town, 2000. http://hdl.handle.net/11427/2713.

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6

Hoff, Justin Wallace. "Molecular typing of wine yeasts : evaluation of typing techniques and establishment of a database." Thesis, Stellenbosch : Stellenbosch University, 2012. http://hdl.handle.net/10019.1/19942.

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Thesis (MSc)--Stellenbosch University, 2012.<br>ENGLISH ABSTRACT: The yeast species, Saccharomyces cerevisiae and S. bayanus are well known for the key role they play during alcoholic fermentation in both wine and beer industries. These yeasts are available in pure active dried form and can be used to produce different wine styles and to manage quality. There are more than 200 commercial wine yeast strains on the market and include naturally isolated strains and hybrids. With all these commercial yeasts available, strain authenticity is very important to the manufacturer of active dried

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7

Ng, Yi-ting, and 吳依婷. "Multilocus sequence typing for streptococcus agalactiae." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2011. http://hub.hku.hk/bib/B46699569.

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8

Ngan, Chi-shing. "Rapid typing of mycobacterium tuberculosis in respiratory specimens using PCR-based mycobacterial interspersed repetitive units (MIRU) typing." Click to view the E-thesis via HKUTO, 2009. http://sunzi.lib.hku.hk/hkuto/record/B4378334X.

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9

Hielm, Sebastian. "Molecular detection, typing and epidemiology og Clostridium botulinum." Helsinki : University of Helsinki, 1999. http://ethesis.helsinki.fi/julkaisut/ela/elint/vk/hielm/.

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10

Hu, Honghua. "Molecular typing and evolution of Salmonella enterica serovar Typhimurium." Thesis, The University of Sydney, 2005. http://hdl.handle.net/2123/704.

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Salmonella enterica serovar Typhimurium is a common cause of salmonellosis among humans and animals worldwide. In Australia, Typhimurium is responsible for over half of the salmonellosis cases. The Anderson phage-typing scheme is the primary means of long-term surveillance of Typhimurium outbreak isolates, and has played an important role in epidemiology. However, there exist quite a number of strains of Typhimurium that cannot be defined by the phage-typing scheme. Furthermore, the knowledge of evolutionary relationships among isolates of different phage types is still very limited and the ge

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11

Hu, Honghua. "Molecular typing and evolution of Salmonella enterica serovar Typhimurium." University of Sydney. School of Molecular and Microbial Biosciences, 2005. http://hdl.handle.net/2123/704.

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Salmonella enterica serovar Typhimurium is a common cause of salmonellosis among humans and animals worldwide. In Australia, Typhimurium is responsible for over half of the salmonellosis cases. The Anderson phage-typing scheme is the primary means of long-term surveillance of Typhimurium outbreak isolates, and has played an important role in epidemiology. However, there exist quite a number of strains of Typhimurium that cannot be defined by the phage-typing scheme. Furthermore, the knowledge of evolutionary relationships among isolates of different phage types is still very limited and the ge

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12

Robinson, Sally Rae. "Isolation, characterisation and molecular typing of feline mycoplasma species." Connect to thesis, 2009. http://repository.unimelb.edu.au/10187/5512.

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The exact role of mycoplasma in feline ocular and respiratory disease is not yet understood. The results of previous studies are contradictory in this regard. There is some evidence to suggest that M. felis has a pathogenic role in such diseases, but it is inconclusive.<br>The aim of this study was to investigate the prevalence and anatomical distribution of mycoplasmas in a population of shelter cats, to determine which species were present, and establish the association of their presence with ocular or respiratory disease.<br>The prevalence of mycoplasma in the 110 cats examined was 71.8%, a

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13

Gracias, Kiev S. "Molecular typing of virulence genes in enterotoxigenic Bacillus cereus." Virtual Press, 2007. http://liblink.bsu.edu/uhtbin/catkey/1378147.

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Bacillus cereus causes emesis and/or diarrhea following ingestion of contaminated food due to the production of emetic toxins and enterotoxins. SYBR Green I is used as an intercalating dye and its florescence increases as a result of DNA amplification during real-time PCR. A second-derivative plot is obtained at the end of the PCR run, where amplicons are differentiated based on their DNA melting temperature (Tm). DNA was extracted from Tryptic Soy Broth (TSB) and 2.5% Nonfat Dry Milk (NFDM)-grown B. cereus at cell densities of 10',106,105,104,0,102, and 101 cfu/ml. In order to detect the mult

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14

Sharma, Naresh Kumar. "Development of novel molecular typing methods for Staphylococcus aureus." Thesis, University of Nottingham, 1997. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.361470.

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15

Abdullah, Saleh Mohammed S. "Blood group typing by molecular techniques : application to immunohaematology." Thesis, University of Aberdeen, 2004. http://digitool.abdn.ac.uk/R?func=search-advanced-go&find_code1=WSN&request1=AAIU486962.

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The initial aim was to establish conventional DNA typing technology for blood group typing using cell derived genomic DNA material from donors. Accordingly, blood samples were collected from 200 healthy, randomly selected, Aberdeen Regional blood donors. The DNA extracted from these samples was used to develop and validate PCR assays for RHD, RHDPsi, RHC/c, KEL1 and KEL2, Fya and Fyb and ABO blood group alleles. All samples were also phenotyped serologically for RH, KEL, Duffy and ABO blood groups. Complete concordance was observed between phenotype and genotype. The developed RHD, RHDPsi and

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16

Zhao, Shuai. "Studies on molecular typing and pathogenicity of Xanthomonas oryzae." Thesis, Montpellier 2, 2012. http://www.theses.fr/2012MON20043/document.

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La bactériose vasculaire du riz (BLB) et bactériose non-vasculaire du riz (BLS), causées respectivement par Xanthomonas oryzae pv. oryzae (Xoo) et X. oryzae pv. oryzicola (Xoc), sont les deux plus importantes maladies bactériennes du riz. Ces maladies limitent le rendement de la production de riz dans les zones rizicoles en Asie et dans certaines régions d'Afrique. L'infection et la multiplication bactérienne dans les tissus de l'hôte dépendent souvent des facteurs de virulence de ces bactéries dont le type le système de sécrétion de type III (T3SS) et ses substrats. Dans cette thèse, nous avo

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17

Hadi, Syed Sibte. "A molecular study of Pakistani populations using short tandem repeat markers." Thesis, University of Glasgow, 2001. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.341966.

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18

Kan, Man-yee Elsie. "Application of neisseria gonorrhoeae molecular typing techniques in forensic medicine." Click to view the E-thesis via HKUTO, 2004. http://sunzi.lib.hku.hk/hkuto/record/B31971854.

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19

Octavia, Sophie Biotechnology &amp Biomolecular Sciences Faculty of Science UNSW. "Molecular typing and evolutionary relationships of Salmonella enterica serovar Typhi." Publisher:University of New South Wales. Biotechnology & Biomolecular Sciences, 2008. http://handle.unsw.edu.au/1959.4/43115.

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The evolutionary relationship between Salmonella enterica serovar Typhi, other typhoid-like enteric fever causing serovars and 10 non-Typhoid serovars from S. enterica subspecies I, could not be determined by comparative nucleotide sequences of six genes. Phylogenetic analyses of the dataset showed that the genes of interest underwent frequent recombination, suggesting a low level of clonality within subspecies I of S. enterica. To establish the evolutionary relationships within serovar Typhi, genome-wide Single Nucleotide Polymorphism (SNP) was explored as a marker for both typing purposes an

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20

Kan, Man-yee Elsie, and 簡文意. "Application of neisseria gonorrhoeae molecular typing techniques in forensic medicine." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2004. http://hub.hku.hk/bib/B31971854.

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21

Thomas, Prasad [Verfasser]. "Genome sequencing and molecular typing of Clostridium chauvoei / Prasad Thomas." Berlin : Freie Universität Berlin, 2018. http://d-nb.info/1153769794/34.

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22

Sims, Catriona Margaret. "Molecular typing of bacteria from poultry and poultry processing environments." Thesis, University of Nottingham, 1996. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.319674.

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23

Anthony, Richard Michael. "Molecular typing methods applied to yeasts from the genus Malassezia." Thesis, King's College London (University of London), 1995. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.338779.

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24

Magalhães, Bárbara Gomes. "Evaluation of a new molecular typing strategy of Pseudomonas aeruginosa." Master's thesis, Universidade de Aveiro, 2014. http://hdl.handle.net/10773/13861.

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Mestrado em Microbiologia<br>Pseudomonas aeruginosa is the third leading cause of hospital acquired infection in intensive care unit (ICU) patients. This microorganism holds responsibility in a high number of nosocomial infections and their severity. Because it is ubiquitous in the environment and also constitutes the endogenous microbiota of hospitalized patients, there is a need to use powerful molecular typing methods to establish clonal relationships between individual isolates. Double Locus Sequence Typing (DLST) has recently been used in the analysis of P. aeruginosa strains relatedness,

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25

Ip, Ka-fai, and 葉嘉輝. "Molecular epidemiological study of mycobacterium tuberculosis using IS6110-RFLP and MIRU typing." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2005. http://hub.hku.hk/bib/B45010092.

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26

Klint, Markus. "Chlamydia trachomatis: Development of molecular typing methods and applications in epidemiology." Doctoral thesis, Uppsala universitet, Klinisk bakteriologi, 2009. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-108930.

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A general aim was to combine molecular typing methods with clinical background information to increase epidemiological knowledge about Chlamydia trachomatis infections. An outbreak of Lymfogranuloma venereum (LGV), caused by a more invasive variant of C. trachomatis, was reported from the Netherlands in 2003 among men who have sex with men (MSM). All Chlamydia positive specimens from a venereal disease clinic for MSM in Stockholm during one year were genotyped. No spread of LGV was found, apart from three symptomatic cases. The same ompA genotypes were found among MSM in Melbourne, but the gen

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27

de, Jong Anton. "Detection and molecular typing of Cryptosporidium in South African wastewater plants." Thesis, Uppsala universitet, Institutionen för medicinsk biokemi och mikrobiologi, 2017. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-338855.

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Cryptosporidium is a protozoan parasite infecting the intestines of its hosts, leading to acute diarrheal disease. Out of 26 recognized species, 14 are known to infect humans. Of most importance, from a human perspective are Cryptosporidium parvum and Cryptosporidium hominis, of which the former is known to have zoonotic potential. Globally, cryptosporidiosis affect people with lowered immune status particularly hard; among children under five it is the most important parasitic cause of gastroenteritis. In the region of KwaZulu-Natal, on the east coast of South Africa, Cryptosporidium is consi

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28

Owen, Jonathan Paul. "Molecular strain typing and environmental persistence of ruminant transmissible spongiform encephalopathies." Thesis, University of Leicester, 2012. http://hdl.handle.net/2381/10186.

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A novel thermolysin digestion method for the molecular strain-typing of ruminant TSEs has been developed which resulted in the clearance of cellular prion protein (PrPc) from healthy sheep or cattle brain homogenates, while digestion of scrapie or BSE infected samples resulted in the generation of the full-length disease-related isoform, PrPSc. Using antibodies against the amino terminal region of PrP it was possible to distinguish ovine scrapie from ovine BSE, permitting the potential identification of BSE infected sheep within the UK flock. The identification of a disease-associated, endogen

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29

Baquar, Namoos. "Molecular epidemiological typing of Salmonella with the DNA insertion sequence IS200." Thesis, Open University, 1995. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.262529.

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30

Sommerhalter, Kristin McCarthy. "Use of molecular typing methods in characterizing MRSA infections in Ohio." The Ohio State University, 2015. http://rave.ohiolink.edu/etdc/view?acc_num=osu1440090373.

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31

Schulte, Kathleen Q. "Mutagenized HLA DNA Constructs: Tools for Validating Molecular HLA Typing Methodologies." Thesis, University of North Texas, 1999. https://digital.library.unt.edu/ark:/67531/metadc500888/.

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This study describes the development and validation of mutagenized cloned DNA constructs, which correspond to the polymorphic regions of the class II region of the HLA complex. The constructs were used to verify the allelic specificity of primers and probes in polymerase chain reaction (PCR)-based HLA typing assays such as Sequence Specific Primers (SSP) and Sequence Specific Oligonucleotide Probes (SSOP). The constructs consisted of the entire polymorphic region of exon 2 of class II HLA allele sequences that included primer annealing sites or probe hybridization sites. An HLA allele sequence

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32

Abreu, Juliana Aizawa Porto de. "Estudo da diversidade molecular de linhagens de Staphylococcus aureus de isolados de mastite bovina." Universidade de São Paulo, 2017. http://www.teses.usp.br/teses/disponiveis/10/10134/tde-17042017-172505/.

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A mastite bovina é considerada a enfermidade de maior impacto na pecuária leiteira mundial. Apesar da adoção de práticas de manejo para minimizar a ocorrência desta, os resultados não são satisfatórios para o controle de Staphylococcus aureus, o principal agente causador. Além da importância veterinária, possui implicações na saúde humana devido ao uso extensivo de antibióticos no tratamento e controle da doença e devido ao potencial de disseminação zoonótica de S. aureus. A principal preocupação em relação à resistência aos antimicrobianos é referente à meticilina, mediada pelo gene mecA. Est

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33

Ip, Ka-fai. "Molecular epidemiological study of mycobacterium tuberculosis using IS6110-RFLP and MIRU typing /." View the Table of Contents & Abstract, 2005. http://sunzi.lib.hku.hk/hkuto/record/B31495473.

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34

Cebeci, Aydin Aysun. "Molecular Identification And Typing Of Lactobacillus Delbrueckii Subspecies Bulgaricus And Streptococcus Thermophilus." Phd thesis, METU, 2008. http://etd.lib.metu.edu.tr/upload/3/12609333/index.pdf.

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Lactic acid bacteria are associated with preservation of foods, including milk, meat and vegetables. Yoghurt is produced by the cooperative action of two starter bacteria<br>S. thermophilus and L. delbrueckii subsp. bulgaricus. In this study, identification and typing of yoghurt starter bacteria were aimed. Traditional home made yoghurts were collected from different areas of Turkey, identification of those isolates at species and subspecies level and typing at strain level were achieved using PCR based methods. In our study, identification of yogurt starter bacteria was studied using species

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35

Miah, Aklak. "Characterisation and molecular typing of clinical and environmental isolates of Vibrio parahaemolyticus." Thesis, University of Plymouth, 2009. http://hdl.handle.net/10026.1/1977.

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Vibrio parahaemolyticus is a natural inhabitant of coastal waters worldwide and is the leading cause of seafood-borne gastroenteritis. This study reports on the use of several molecular characterisation methods to screen clinical and environmental isolates of V parahaemolyticus to assess whether such techniques can be used to distinguish pathogenic isolates reliably. In a total of 86 isolates mainly of V parahaemolyticus but also including V cholerae, V vulnificus and several other species, serotypes of the more virulent clonal group 03:K6 were identified, but otherwise there appeared no assoc

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36

Fonseka, Thithalapitige Sunil Gamini. "Molecular typing of food poisoning bacteria isolated from farm shrimp and poultry." Thesis, University of Nottingham, 1993. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.316950.

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37

Herrmann, Daland C. "Molecular typing of Toxoplasma gondii isolates from cats and humans in Germany." Doctoral thesis, Humboldt-Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät I, 2012. http://dx.doi.org/10.18452/16606.

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Toxoplasma gondii weist eine weltweite Verbreitung auf und kann fast alle Wirbeltiere, vor allem Vögel und Menschen infizieren. Felide sind Endwirte von T. gondii, welche das infektiöse und umweltresistente Oozysten-Stadium ausscheiden können. T. gondii kann auch ohne sexuelle Vermehrung unterschiedlichste Zwischenwirte und Zwischenwirtspezies infizieren. Obwohl eine sexuelle Phase ein Teil des Lebenszyklus ist, werden rekombinierte Genotypen nur selten beobachtet. Dies ist ein Grund dafür, warum T. gondii eine klonale Populationsstruktur erkennen lässt. Während in Nordamerika und Europa drei

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38

Rettberg, Jill Walker. "The molecular characterisation and rapid detection of methicillin-resistant Staphylococcus aureus." Thesis, Manchester Metropolitan University, 2000. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.311205.

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39

Carvalho, Vanessa Rafaela de [UNESP]. "Determinação da diversidade bacteriana em culturas de caldo Macconkey de materiais clínicos de portadores de doença de Crohn e análise de propriedades de isolados de Escherichia coli identificados." Universidade Estadual Paulista (UNESP), 2016. http://hdl.handle.net/11449/143087.

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Submitted by Vanessa Rafaela de Carvalho null (vanessa@fca.unesp.br) on 2016-08-17T15:38:02Z No. of bitstreams: 1 VANESSA RAFAELA DE CARVALHO.pdf: 1265274 bytes, checksum: b22dd09c9d7e691c86790c85e9d494d1 (MD5)<br>Approved for entry into archive by Ana Paula Grisoto (grisotoana@reitoria.unesp.br) on 2016-08-19T17:25:50Z (GMT) No. of bitstreams: 1 carvalho_vr_me_bot.pdf: 1265274 bytes, checksum: b22dd09c9d7e691c86790c85e9d494d1 (MD5)<br>Made available in DSpace on 2016-08-19T17:25:50Z (GMT). No. of bitstreams: 1 carvalho_vr_me_bot.pdf: 1265274 bytes, checksum: b22dd09c9d7e691c86790c85e9d49

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Carvalho, Vanessa Rafaela de. "Determinação da diversidade bacteriana em culturas de caldo Macconkey de materiais clínicos de portadores de doença de Crohn e análise de propriedades de isolados de Escherichia coli identificados." Botucatu, 2016. http://hdl.handle.net/11449/143087.

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Orientador: Josias Rodrigues<br>Resumo: Desequilíbrio na composição de espécies bacterianas (disbiose) do intestino é uma característica da doença de Crohn (DC), a mais grave das doenças inflamatórias intestinais (DII). Na disbiose da DII, há um aumento de certos grupos de bactérias, tais como as Proteobacteria, em alguns pacientes. Acredita-se que o aumento destas bactérias deve contribuir para as reações inflamatórias responsáveis pelas lesões observadas no intestino de portadores de DC e retocolite ulcerativa, ao estimular a produção de citocinas por células locais do sistema imune. Proteob

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41

Scott, Allison. "Sensitivity and specificity of spoligotyping and MIRU-VNTR typing in tuberculosis molecular epidemiology." Thesis, McGill University, 2004. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=81436.

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The standard genotyping technique in tuberculosis molecular epidemiology is IS6110 Restriction Fragment Length Polymorphism (RFLP). Several public health organizations intend to switch from IS6110 RFLP to spoligotyping and Mycobacterium Interspersed Repetitive Units - Variable Number Tandem Repeats (MIRU-VNTR); however, the relevant test characteristics have not been studied. Objective. Estimate the sensitivities and specificities of spoligotyping and MIRU-VNTR using IS6110 RFLP as the reference standard.<br>Population. Residents of the island of Montreal diagnosed with active tuberculo

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42

Webster, Carol Ann. "The use of molecular typing systems for studying the epidemiology of Acinetobacter infections." Thesis, University of Nottingham, 1997. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.388315.

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43

Fazaeli, Asghar. "Development of molecular markers for the typing and genetic analysis of Toxoplasma gondii." Thesis, University of Aberdeen, 2000. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.367484.

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To develop robust and reproducible methods for molecular typing of <I>Toxoplasma </I>strains, the DNA regions of 5<I>S</I> rDNA, 28S-18S rDNA <I>IGS SAG2</I>, and <I>GRA6</I> loci were examined. The 5<I>S</I> sequences were identical among 24 different strains; sequencing of the <I>IGS</I> region showed a few polymorphisms (0.66%) distinguishing virulence types. The IGS PCR-RFLP methods were developed and used to examine 29 strains of different virulence types. Sequence analysis of the IGS 5'-end showed great diversity between <I>Neospora caninum </I>and <I>T. gondii. </I>The IGS-RFLPs also cl

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44

Hamdi, Cassandra. "Clostridium difficile : Rapid typing Clostridium difficile using MALDI-TOF MS analysis." Thesis, Högskolan i Skövde, Institutionen för biovetenskap, 2019. http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-17659.

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45

Olvera, van der Stoep Alexandre. "Application of molecular techniques to the diagnosis and epidemiology of Haemophilus parasuis." Doctoral thesis, Universitat Autònoma de Barcelona, 2007. http://hdl.handle.net/10803/3573.

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Haemophilus parasuis es l'agent etiológic de la malaltia de Glässer's, però aquesta bactèria pot causar altres manifestacions clíniques, a més a més de poder ser aïllat del tracte respiratori superior de porcs sans. Els aïllaments de H. parasuis poden presentar diferents fenotips (per exemple diferent perfil de proteïnes, morfologia de colònia o bé producció de càpsula) i diferent capacitat patogènica. Les diferencies entre soques també s'han demostrat a nivell genètic. S'han emprat varis mètodes de tipat per classificar soques de camp d' H. parasuis, però totes presentaven problemes de resol

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46

Siafakas, Nikolaos. "Molecular classification of coxsackie A virus reference and wild type strains on the basis of RFLP analysis and sequencing of the 5'-UTR : structural and evolutionary aspects." Thesis, University of Essex, 2002. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.369367.

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47

Chan, Tsz-ming. "Comparison of molecular epidemiological study on Mycobacterium tuberculosis using IS6110 RFLP and IS6110 PCR typing." Hong Kong : University of Hong Kong, 2000. http://sunzi.lib.hku.hk/hkuto/record.jsp?B22029850.

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48

Abdel-Glil, Mostafa Youssef [Verfasser]. "In silico genome analysis and molecular typing of Clostridium perfringens / Mostafa Y. Abdel-Glil." Berlin : Freie Universität Berlin, 2020. http://nbn-resolving.de/urn:nbn:de:kobv:188-refubium-26585-2.

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49

Caddick, James M. "Molecular typing of hospital-acquired, community-acquired and multidrug-resistant methicillin-resistant staphylococcus aureus." Thesis, Aston University, 2005. http://publications.aston.ac.uk/11028/.

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Abdel-Glil, Mostafa Y. [Verfasser]. "In silico genome analysis and molecular typing of Clostridium perfringens / Mostafa Y. Abdel-Glil." Berlin : Freie Universität Berlin, 2020. http://d-nb.info/1204432899/34.

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