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1
Zhang, Jun, Xufeng Wang, and Jun Ren. "Simulation of Gross Primary Productivity Using Multiple Light Use Efficiency Models." Land 10, no. 3 (March 23, 2021): 329. http://dx.doi.org/10.3390/land10030329.
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Gross primary productivity (GPP) is the most basic variable in a carbon cycle study that determines the carbon that enters the ecosystem. The remote sensing-based light use efficiency (LUE) model is one of the primary tools that is currently used to estimate the GPP at the regional scale. Many remote sensing-based GPP models have been developed in the last several decades, and these models have been well evaluated at some sites. However, an accurate estimation of the GPP remains challenging work using LUE models because of uncertainties in the model caused by model parameters, model forcing, and vegetation spatial heterogeneity. In this study, five widely used LUE models, Glo-PEM, VPM, EC-LUE, the MODIS GPP algorithm, and C-fix, were selected to simulate the GPP of the Heihe River Basin forced using in situ measurements. A multiple-model averaging method, Bayesian model averaging (BMA), was used to combine the five models to obtain a more reliable GPP estimation. The BMA was trained using carbon flux data from five eddy covariance towers located at dominant vegetation types in the study area. Generally, the BMA method performed better than any single LUE model. From the case study in the study area, it is indicated that the trained BMA is an efficient method to combine multiple LUE models and can improve the GPP simulation accuracy.
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McCallum, I., O. Franklin, E. Moltchanova, L. Merbold, C. Schmullius, A. Shvidenko, D. Schepaschenko, and S. Fritz. "Improved light and temperature responses for light-use-efficiency-based GPP models." Biogeosciences 10, no. 10 (October 17, 2013): 6577–90. http://dx.doi.org/10.5194/bg-10-6577-2013.
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Abstract. Gross primary production (GPP) is the process by which carbon enters ecosystems. Models based on the theory of light use efficiency (LUE) have emerged as an efficient method to estimate ecosystem GPP. However, problems have been noted when applying global parameterizations to biome-level applications. In particular, model–data comparisons of GPP have shown that models (including LUE models) have difficulty matching estimated GPP. This is significant as errors in simulated GPP may propagate through models (e.g. Earth system models). Clearly, unique biome-level characteristics must be accounted for if model accuracy is to be improved. We hypothesize that in boreal regions (which are strongly temperature controlled), accounting for temperature acclimation and non-linear light response of daily GPP will improve model performance. To test this hypothesis, we have chosen four diagnostic models for comparison, namely an LUE model (linear in its light response) both with and without temperature acclimation and an LUE model and a big leaf model both with temperature acclimation and non-linear in their light response. All models include environmental modifiers for temperature and vapour pressure deficit (VPD). Initially, all models were calibrated against five eddy covariance (EC) sites within Russia for the years 2002–2005, for a total of 17 site years. Model evaluation was performed via 10-out cross-validation. Cross-validation clearly demonstrates the improvement in model performance that temperature acclimation makes in modelling GPP at strongly temperature-controlled sites in Russia. These results would indicate that inclusion of temperature acclimation in models on sites experiencing cold temperatures is imperative. Additionally, the inclusion of a non-linear light response function is shown to further improve performance, particularly in less temperature-controlled sites.
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McCallum, I., O. Franklin, E. Moltchanova, L. Merbold, C. Schmullius, A. Shvidenko, D. Schepaschenko, and S. Fritz. "Improved light and temperature responses for light use efficiency based GPP models." Biogeosciences Discussions 10, no. 5 (May 29, 2013): 8919–47. http://dx.doi.org/10.5194/bgd-10-8919-2013.
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Abstract. Gross primary production (GPP) is the process by which carbon enters ecosystems. Diagnostic models, based on the theory of light use efficiency (LUE) have emerged as one method to estimate ecosystem GPP. However, problems have been noted particularly when applying global results at regional levels. We hypothesize that accounting for non-linear light response and temperature acclimation of daily GPP in boreal regions will improve model performance. To test this hypothesis, we have chosen four diagnostic models for comparison, namely: an LUE model (linear in its light response) both with and without temperature acclimation and an LUE model and a big leaf model both with temperature acclimation and non-linear in their light response. All models include environmental modifiers for temperature and vapour pressure deficit (VPD). Initially, all models were calibrated against four eddy covariance sites within Russia for the years 2002–2004, for a total of 10 site years. Model evaluation was performed via 10-out cross-validation. This study presents a methodology for comparing diagnostic modeling approaches. Cross validation clearly demonstrates the improvement in model performance that temperature acclimation makes in modeling GPP at strongly temperature controlled sites in Russia. Additionally, the inclusion of a non-linear light response function is shown to further improve performance. Furthermore we demonstrate the parameterization of the big leaf model, incorporating environmental modifiers for temperature and VPD.
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Goerner, A., M. Reichstein, E. Tomelleri, N. Hanan, S. Rambal, D. Papale, D. Dragoni, and C. Schmullius. "Remote sensing of ecosystem light use efficiency with MODIS-based PRI." Biogeosciences 8, no. 1 (January 26, 2011): 189–202. http://dx.doi.org/10.5194/bg-8-189-2011.
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Abstract. Several studies sustained the possibility that a photochemical reflectance index (PRI) directly obtained from satellite data can be used as a proxy for ecosystem light use efficiency (LUE) in diagnostic models of gross primary productivity. This modelling approach would avoid the complications that are involved in using meteorological data as constraints for a fixed maximum LUE. However, no unifying model predicting LUE across climate zones and time based on MODIS PRI has been published to date. In this study, we evaluate the effectiveness with which MODIS-based PRI can be used to estimate ecosystem light use efficiency at study sites of different plant functional types and vegetation densities. Our objective is to examine if known limitations such as dependence on viewing and illumination geometry can be overcome and a single PRI-based model of LUE (i.e. based on the same reference band) can be applied under a wide range of conditions. Furthermore, we were interested in the effect of using different faPAR (fraction of absorbed photosynthetically active radiation) products on the in-situ LUE used as ground truth and thus on the whole evaluation exercise. We found that estimating LUE at site-level based on PRI reduces uncertainty compared to the approaches relying on a maximum LUE reduced by minimum temperature and vapour pressure deficit. Despite the advantages of using PRI to estimate LUE at site-level, we could not establish an universally applicable light use efficiency model based on MODIS PRI. Models that were optimised for a pool of data from several sites did not perform well.
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Xie, Zhiying, Cenliang Zhao, Wenquan Zhu, Hui Zhang, and Yongshuo H. Fu. "A Radiation-Regulated Dynamic Maximum Light Use Efficiency for Improving Gross Primary Productivity Estimation." Remote Sensing 15, no. 5 (February 21, 2023): 1176. http://dx.doi.org/10.3390/rs15051176.
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The light use efficiency (LUE) model has been widely used in regional and global terrestrial gross primary productivity (GPP) estimation due to its simple structure, few input parameters, and particular theoretical basis. As a key input parameter of the LUE model, the maximum LUE (Ɛmax) is crucial for the accurate estimation of GPP and to the interpretability of the LUE model. Currently, most studies have assumed Ɛmax as a universal constant or constants depending on vegetation type, which means that the spatiotemporal dynamics of Ɛmax were ignored, leading to obvious uncertainties in LUE-based GPP estimation. Using quality-screened daily data from the FLUXNET 2015 dataset, this paper proposed a photosynthetically active radiation (PAR)-regulated dynamic Ɛmax (PAR-Ɛmax, corresponding model named PAR-LUE) by considering the nonlinear response of vegetation photosynthesis to solar radiation. The PAR-LUE was compared with static Ɛmax-based (MODIS and EC-LUE) and spatial dynamics Ɛmax-based (D-VPM) models at 171 flux sites. Validation results showed that (1) R2 and RMSE between PAR-LUE GPP and observed GPP were 0.65 (0.44) and 2.55 (1.82) g C m−2 MJ−1 d−1 at the 8-day (annual) scale, respectively; (2) GPP estimation accuracy of PAR-LUE was higher than that of other LUE-based models (MODIS, EC-LUE, and D-VPM), specifically, R2 increased by 29.41%, 2.33%, and 12.82%, and RMSE decreased by 0.36, 0.14, and 0.34 g C m−2 MJ−1 d−1 at the annual scale; and (3) specifically, compared to the static Ɛmax-based model (MODIS and EC-LUE), PAR-LUE effectively relieved the underestimation of high GPP. Overall, the newly developed PAR-Ɛmax provided an estimation method utilizing a spatiotemporal dynamic Ɛmax, which effectively reduced the uncertainty of GPP estimation and provided a new option for the optimization of Ɛmax in the LUE model.
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Wellington, Michael J., Petra Kuhnert, Luigi J. Renzullo, and Roger Lawes. "Modelling Within-Season Variation in Light Use Efficiency Enhances Productivity Estimates for Cropland." Remote Sensing 14, no. 6 (March 20, 2022): 1495. http://dx.doi.org/10.3390/rs14061495.
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Gross Primary Productivity (GPP) for cropland is often estimated using a fixed value for maximum light use efficiency (LUEmax) which is reduced to light use efficiency (LUE) by environmental stress scalars. This may not reflect variation in LUE within a crop season, and environmental stress scalars developed for ecosystem scale modelling may not apply linearly to croplands. We predicted LUE on several vegetation indices, crop type, and agroclimatic predictors using supervised random forest regression with training data from flux towers. Using a fixed LUEmax and environmental stress scalars produced an overestimation of GPP with a root mean square error (RMSE) of 6.26 gC/m2/day, while using predicted LUE from random forest regression produced RMSEs of 0.099 and 0.404 gC/m2/day for models with and without crop type as a predictor, respectively. Prediction uncertainty was greater for the model without crop type. These results show that LUE varies between crop type, is dynamic within a crop season, and LUE models that reflect this are able to produce much more accurate estimates of GPP over cropland than using fixed LUEmax with stress scalars. Therefore, we suggest a paradigm shift from setting the LUE variable in cropland productivity models based on environmental stress to focusing more on the variation of LUE within a crop season.
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Goerner, A., M. Reichstein, E. Tomelleri, N. Hanan, S. Rambal, D. Papale, D. Dragoni, and C. Schmullius. "Remote sensing of ecosystem light use efficiency with MODIS-based PRI – the DOs and DON'Ts." Biogeosciences Discussions 7, no. 5 (September 14, 2010): 6935–69. http://dx.doi.org/10.5194/bgd-7-6935-2010.
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Abstract. Several studies sustained the possibility that a photochemical reflectance index (PRI) directly obtained from satellite data can be used as a proxy for ecosystem light use efficiency (LUE) in diagnostic models of gross primary productivity. This modelling approach would avoid the complications that are involved in using meteorological data as constraints for a fixed maximum LUE. However, no unifying model predicting LUE across climate zones and time based on MODIS PRI has been published to date. In this study, we evaluate the efficiency with which MODIS-based PRI can be used to estimate ecosystem light use efficiency at study sites of different plant functional types and vegetation densities. Our objective is to examine if known limitations such as dependance on viewing and illumination geometry can be overcome and a single PRI-based model of LUE (i.e. based on the same reference band) can be applied under a wide range of conditions. Furthermore, we were interested in the effect of using different faPAR (fraction of absorbed photosynthetically active radiation) products on the in-situ LUE used as ground truth and thus on the whole evaluation exercise. We found that estimating LUE at site-level based on PRI reduces uncertainty compared to the approaches relying on a maximum LUE reduced by minimum temperature and vapour pressure deficit. Despite the advantages of using PRI to estimate LUE at site-level, we could not establish an universally applicable light use efficiency model based on MODIS PRI. Models that were optimised for a pool of data from several sites did not perform well.
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Wang, S., Z. Li, Y. Zhang, D. Yang, and C. Ni. "LINKING PHOTOSYNTHETIC LIGHT USE EFFICIENCY AND OPTICAL VEGETATION ACTIVE INDICATORS: IMPLICATIONS FOR GROSS PRIMARY PRODUCTION ESTIMATION BY REMOTE SENSING." ISPRS Annals of Photogrammetry, Remote Sensing and Spatial Information Sciences V-3-2020 (August 3, 2020): 571–78. http://dx.doi.org/10.5194/isprs-annals-v-3-2020-571-2020.
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Abstract. Over the last 40 years, the light use efficiency (LUE) model has become a popular approach for gross primary productivity (GPP) estimation in the carbon and remote sensing communities. Despite the fact that the LUE model provides a simple but effective way to approximate GPP at ecosystem to global scales from remote sensing data, when implemented in real GPP modelling, however, the practical form of the model can vary. By reviewing different forms of LUE model and their performances at ecosystem to global scales, we conclude that the relationships between LUE and optical vegetation active indicators (OVAIs, including vegetation indices and sun-induced chlorophyll fluorescence-based products) across time and space are key for understanding and applying the LUE model. In this work, the relationships between LUE and OVAIs are investigated at flux-tower scale, using both remotely sensed and simulated datasets. We find that i) LUE-OVAI relationships during the season are highly site-dependent, which is complexed by seasonal changes of leaf pigment concentration, canopy structure, radiation and Vcmax; ii) LUE tends to converge during peak growing season, which enables applying pure OVAI-based LUE models without specifically parameterizing LUE and iii) Chlorophyll-sensitive OVAIs, especially machine-learning-based SIF-like signal, exhibits a potential to represent spatial variability of LUE during the peak growing season.We also show the power of time-series model simulations to improve the understanding of LUE-OVAI relationships at seasonal scale.
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RATJEN, A. M., and H. KAGE. "Nitrogen-limited light use efficiency in wheat crop simulators: comparing three model approaches." Journal of Agricultural Science 154, no. 6 (December 8, 2015): 1090–101. http://dx.doi.org/10.1017/s0021859615001082.
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SUMMARYThree different explanatory indicators for reduced light use efficiency (LUE) under limited nitrogen (N) supply were evaluated. The indicators can be used to adapt dry matter production of crop simulators to N-limited growth conditions. The first indicator, nitrogen factor (NFAC), originates from the CERES-Wheat model and calculates the critical N concentration of the shoot as a function of phenological development. The second indicator, N nutrition index (NNI), calculates a critical N concentration as a function of shoot dry matter. The third indicator, specific leaf nitrogen (SLN) index (SLNI), has been newly developed. It compares the actual SLN with the maximum SLN (SLNmax). The latter is calculated as a function of the green area index (GAI). The comparison was based on growth curves and fitted to empirical data, and was carried out independently from a dynamic crop model. The data set included four growing seasons (2004–2006, 2012) in Northern Germany and seven modern bread wheat cultivars with varying N fertilization levels (0–320 kg N/ha). The influence of N shortage on LUE was evaluated from the beginning of stem elongation until flowering. With the exception of 2005, the highest productivity was observed for the highest N level. A moderate N shortage primarily reduced GAI and therefore light interception, while LUE remained stable under moderate N shortage. The relative LUE (rLUE) of a specific day was defined as the ratio of actual to maximal LUE. None of the indicators was proportional to rLUE, but the relationships were described well by quadratic plateau curves. The correlation between simulated and measured rLUE was significant for all explanatory indicators, but different in terms of mean absolute error and coefficient of determination (R2). The performance of SLNI and NNI was similar, but the goodness of prediction was much lower for NFAC. Compared with NNI and NFAC, SLNI corresponded to leaf N and was therefore sensitive to N translocation from leaves to growing grains during the reproductive stage. For this reason, SLNI may have the potential to improve simulation of dry matter production in wheat crop simulators.
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Wang, H., I. C. Prentice, and J. Ni. "Primary production in forests and grasslands of China: contrasting environmental responses of light- and water-use efficiency models." Biogeosciences 9, no. 11 (November 22, 2012): 4689–705. http://dx.doi.org/10.5194/bg-9-4689-2012.
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Abstract. An extensive data set on net primary production (NPP) in China's forests is analysed with the help of two simple theoretically derived models based on the light use efficiency (LUE) and water use efficiency (WUE) concepts, respectively. The two models describe the data equally well, but their implied responses to [CO2] and temperature differ substantially. These responses are illustrated by sensitivity tests in which [CO2] is kept constant or doubled, temperatures are kept constant or increased by 3.5 K, and precipitation is changed by ±10%. Precipitation changes elicit similar responses in both models. But NPP in South China, especially, is reduced by warming in the LUE model, whereas it is increased in the WUE model. The [CO2] response of the WUE model is much larger than that of the LUE model. It is argued that the two models provide upper and lower bounds for this response, with the LUE model more realistic for forests. The differences between the two models illustrate some potential causes of the large differences (even in sign) in the global NPP response of different global vegetation models to temperature and [CO2].
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Ma, Li, Shaoqiang Wang, Jinghua Chen, Bin Chen, Leiming Zhang, Lixia Ma, Muhammad Amir, Leigang Sun, Guoyi Zhou, and Ze Meng. "Relationship between Light Use Efficiency and Photochemical Reflectance Index Corrected Using a BRDF Model at a Subtropical Mixed Forest." Remote Sensing 12, no. 3 (February 7, 2020): 550. http://dx.doi.org/10.3390/rs12030550.
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Light use efficiency (LUE) is a key indicator of vegetation photosynthesis, which provides important insights into how vegetation productivity responds to environmental conditions. The photochemical reflectance index (PRI) is based on reflectance at 531 and 570 nm, which reflects the xanthophyll cycle process of plants under different radiation conditions, and makes LUE related to plant optical characteristics. In this study, tower-based PRI and eddy covariance (EC) based LUEs were used to explore the ability of PRI to track LUE variations in a subtropical, evergreen mixed forest in South China. The results indicate that there is a stronger relationship between PRI and LUE, corrected by the bidirectional reflectance distribution function (BRDF), where R2 = 0.46 before correction and R2 = 0.60 after correction. Generally, PRI is able to capture diurnal and seasonal changes in LUE. Simultaneously, this study highlights a significant correlation between LUE and PRI, but there is also a large seasonal difference in its correlation. The correlation in winter was significantly stronger than summer. The strongest correlation is found in November (R2 = 0.91) and the weakest is in July (R2 = 0.34). Photosynthetically active radiation (PAR) had a strong influence on the LUE-PRI relationship, while vapor pressure deficit (VPD) and air temperature (Ta) had negative influences on the relationship between LUE and PRI. Terrestrial laser scanning is used to retrieve the vertical structure of forest crown. Our results show that the vegetation canopy structure (i.e., effective leaf area index, LAIe), extracted from terrestrial laser scanning (TLS) point data in subtropical mixed forests, had a weak influence on LUE. Our research suggests that environmental factors and vegetation canopy structures should be considered when using PRI to accurately estimate LUE.
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Du, Dandan, Chaolei Zheng, Li Jia, Qiting Chen, Min Jiang, Guangcheng Hu, and Jing Lu. "Estimation of Global Cropland Gross Primary Production from Satellite Observations by Integrating Water Availability Variable in Light-Use-Efficiency Model." Remote Sensing 14, no. 7 (April 2, 2022): 1722. http://dx.doi.org/10.3390/rs14071722.
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Satellite-based models have been widely used to estimate gross primary production (GPP) of terrestrial ecosystems. Although they have many advantages for mapping spatiotemporal variations of regional or global GPP, the performance in agroecosystems is relatively poor. In this study, a light-use-efficiency model for cropland GPP estimation, named EF-LUE, driven by remote sensing data, was developed by integrating evaporative fraction (EF) as limiting factor accounting for soil water availability. Model parameters were optimized first using CO2 flux measurements by eddy covariance system from flux tower sites, and the optimized parameters were further spatially extrapolated according to climate zones for global cropland GPP estimation in 2001–2019. The major forcing datasets include the fraction of absorbed photosynthetically active radiation (FAPAR) data from the Copernicus Global Land Service System (CGLS) GEOV2 dataset, EF from the ETMonitor model, and meteorological forcing variables from ERA5 data. The EF-LUE model was first evaluated at flux tower site-level, and the results suggested that the proposed EF-LUE model and the LUE model without using water availability limiting factor, both driven by flux tower meteorology data, explained 82% and 74% of the temporal variations of GPP across crop sites, respectively. The overall KGE increased from 0.73 to 0.83, NSE increased from 0.73 to 0.81, and RMSE decreased from 2.87 to 2.39 g C m−2 d−1 in the estimated GPP after integrating EF in the LUE model. These improvements may be largely attributed to parameters optimized for different climatic zones and incorporating water availability limiting factor expressed by EF into the light-use-efficiency model. At global scale, the verification by GPP measurements from cropland flux tower sites showed that GPP estimated by the EF-LUE model driven by ERA5 reanalysis meteorological data and EF from ETMonitor had overall the highest R2, KGE, and NSE and the smallest RMSE over the four existing GPP datasets (MOD17 GPP, revised EC-LUE GPP, GOSIF GPP and PML-V2 GPP). The global GPP from the EF-LUE model could capture the significant negative GPP anomalies during drought or heat-wave events, indicating its ability to express the impacts of the water stress on cropland GPP.
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Liu, Linqi, Xiang Gao, Binhua Cao, Yinji Ba, Jingling Chen, Xiangfen Cheng, Yu Zhou, Hui Huang, and Jinsong Zhang. "Comparing Different Light Use Efficiency Models to Estimate the Gross Primary Productivity of a Cork Oak Plantation in Northern China." Remote Sensing 14, no. 22 (November 21, 2022): 5905. http://dx.doi.org/10.3390/rs14225905.
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Light use efficiency (LUE) models have been widely used to estimate terrestrial gross primary production (GPP). However, the estimation of GPP still has large uncertainties owing to an insufficient understanding of the complex relationship between water availability and photosynthesis. The plant water stress index (PWSI), which is based on canopy temperature, is very sensitive to the plant stomatal opening and has been regarded as a good indicator for monitoring plant water status at the regional scale. In this study, we selected a cork oak plantation in northern China with an obvious seasonal drought as the research object. Using the ground-observed data, we evaluated the applicability of the LUE models with typical water stress scalars (MOD17, MODTEM, EC-LUE, ECM-LUE, SM-LUE, GLO-PEM, and Wang) in a GPP simulation of the cork oak plantation and explored whether the model’s accuracy can be improved by applying PWSI to modify the above models. The results showed that among the seven LUE models, the water stress scalar had a greater impact on the model’s performance than the temperature stress scalar. On sunny days, the daily GPP simulated by the seven LUE models was poorly matched with the measured GPP, and all models explained only 23–52% of the GPP variation in the cork oak plantation. The modified LUE models can significantly improve the prediction accuracy of the GPP and explain 49–65% of the variation in the daily GPP. On cloudy days, the performance of the modified LUE models did not improve, and the evaporative fraction was more suitable for defining the water stress scalar in the LUE models. The ECM-LUE and the modified GLO-PEM based on PWSI had optimal model structures for simulating the GPP of the cork oak plantation under cloudy and sunny days, respectively. This study provides a reference for the accurate prediction of GPP in terrestrial ecosystems in the future.
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Wang, Mengjia, Rui Sun, Anran Zhu, and Zhiqiang Xiao. "Evaluation and Comparison of Light Use Efficiency and Gross Primary Productivity Using Three Different Approaches." Remote Sensing 12, no. 6 (March 20, 2020): 1003. http://dx.doi.org/10.3390/rs12061003.
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Light use efficiency (LUE), which characterizes the efficiency with which vegetation converts captured/absorbed radiation into organic dry matter through photosynthesis, is a key parameter for estimating vegetation gross primary productivity (GPP). Studies suggest that diffuse radiation induces a higher LUE than direct radiation in short-term and site-scale experiments. The clearness index (CI), described as the fraction of solar incident radiation on the surface of the earth to the extraterrestrial radiation at the top of the atmosphere, is added to the parameterization approach to explain the conditions of diffuse and direct radiation in this study. Machine learning methods—such as the Cubist regression tree approach—are also popular approaches for studying vegetation carbon uptake. This paper aims to compare and analyze the performances of three different approaches for estimating global LUE and GPP. The methods for collecting LUE were based on the following: (1) parameterization approach without CI; (2) parameterization approach with CI; and (3) Cubist regression tree approach. We collected GPP and meteorological data from 180 FLUXNET sites as calibration and validation data and the Global Land Surface Satellite (GLASS) products and ERA-interim data as input data to estimate the global LUE and GPP in 2014. Site-scale validation with FLUXNET measurements indicated that the Cubist regression approach performed better than the parameterization approaches. However, when applying the approaches to global LUE and GPP, the parameterization approach with the CI became the most reliable approach, then closely followed by the parameterization approach without the CI. Spatial analysis showed that the addition of the CI improved the LUE and GPP, especially in high-value zones. The results of the Cubist regression tree approach illustrate more fluctuations than the parameterization approaches. Although the distributions of LUE presented variations over different seasons, vegetation had the highest LUE, at approximately 1.5 gC/MJ, during the whole year in equatorial regions (e.g., South America, middle Africa and Southeast Asia). The three approaches produced roughly consistent global annual GPPs ranging from 109.23 to 120.65 Pg/yr. Our results suggest the parameterization approaches are robust when extrapolating to the global scale, of which the parameterization approach with CI performs slightly better than that without CI. By contrast, the Cubist regression tree produced LUE and GPP with lower accuracy even though it performed the best for model validation at the site scale.
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Stocker, Benjamin D., Han Wang, Nicholas G. Smith, Sandy P. Harrison, Trevor F. Keenan, David Sandoval, Tyler Davis, and I. Colin Prentice. "P-model v1.0: an optimality-based light use efficiency model for simulating ecosystem gross primary production." Geoscientific Model Development 13, no. 3 (March 26, 2020): 1545–81. http://dx.doi.org/10.5194/gmd-13-1545-2020.
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Abstract. Terrestrial photosynthesis is the basis for vegetation growth and drives the land carbon cycle. Accurately simulating gross primary production (GPP, ecosystem-level apparent photosynthesis) is key for satellite monitoring and Earth system model predictions under climate change. While robust models exist for describing leaf-level photosynthesis, predictions diverge due to uncertain photosynthetic traits and parameters which vary on multiple spatial and temporal scales. Here, we describe and evaluate a GPP (photosynthesis per unit ground area) model, the P-model, that combines the Farquhar–von Caemmerer–Berry model for C3 photosynthesis with an optimality principle for the carbon assimilation–transpiration trade-off, and predicts a multi-day average light use efficiency (LUE) for any climate and C3 vegetation type. The model builds on the theory developed in Prentice et al. (2014) and Wang et al. (2017a) and is extended to include low temperature effects on the intrinsic quantum yield and an empirical soil moisture stress factor. The model is forced with site-level data of the fraction of absorbed photosynthetically active radiation (fAPAR) and meteorological data and is evaluated against GPP estimates from a globally distributed network of ecosystem flux measurements. Although the P-model requires relatively few inputs, the R2 for predicted versus observed GPP based on the full model setup is 0.75 (8 d mean, 126 sites) – similar to comparable satellite-data-driven GPP models but without predefined vegetation-type-specific parameters. The R2 is reduced to 0.70 when not accounting for the reduction in quantum yield at low temperatures and effects of low soil moisture on LUE. The R2 for the P-model-predicted LUE is 0.32 (means by site) and 0.48 (means by vegetation type). Applying this model for global-scale simulations yields a total global GPP of 106–122 Pg C yr−1 (mean of 2001–2011), depending on the fAPAR forcing data. The P-model provides a simple but powerful method for predicting – rather than prescribing – light use efficiency and simulating terrestrial photosynthesis across a wide range of conditions. The model is available as an R package (rpmodel).
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Castro, Saulo, and Arturo Sanchez-Azofeifa. "Testing of Automated Photochemical Reflectance Index Sensors as Proxy Measurements of Light Use Efficiency in an Aspen Forest." Sensors 18, no. 10 (October 1, 2018): 3302. http://dx.doi.org/10.3390/s18103302.
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Commercially available autonomous photochemical reflectance index (PRI) sensors are a new development in the remote sensing field that offer novel opportunities for a deeper exploration of vegetation physiology dynamics. In this study, we evaluated the reliability of autonomous PRI sensors (SRS-PRI) developed by METER Group Inc. as proxies of light use efficiency (LUE) in an aspen (Populus tremuloides) forest stand. Before comparisons between PRI and LUE measurements were made, the optical SRS-PRI sensor pairs required calibrations to resolve diurnal and seasonal patterns properly. An offline diurnal calibration procedure was shown to account for variable sky conditions and diurnal illumination changes affecting sensor response. Eddy covariance measurements provided seasonal gross primary productivity (GPP) measures as well as apparent canopy quantum yield dynamics (α). LUE was derived from the ratio of GPP to absorbed photosynthetically active radiation (APAR). Corrected PRI values were derived after diurnal and midday cross-calibration of the sensor’s 532 nm and 570 nm fore-optics, and closely related to both LUE (R2 = 0.62, p < 0.05) and α (R2 = 0.72, p < 0.05). A LUE model derived from corrected PRI values showed good correlation to measured GPP (R2 = 0.77, p < 0.05), with an accuracy comparable to results obtained from an α driven LUE model (R2 = 0.79, p < 0.05). The automated PRI sensors proved to be suitable proxies of light use efficiency. The onset of continuous PRI sensors signifies new opportunities for explicitly examining the cause of changing PRI, LUE, and productivity over time and space. As such, this technology represents great value for the flux, remote sensing and modeling community.
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Rahman, M. M., D. W. Lamb, J. N. Stanley, and M. G. Trotter. "Use of proximal sensors to evaluate at the sub-paddock scale a pasture growth-rate model based on light-use efficiency." Crop and Pasture Science 65, no. 4 (2014): 400. http://dx.doi.org/10.1071/cp14071.
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Monitoring pasture growth rate is an important component of managing grazing livestock production systems. In this study, we demonstrate that a pasture growth rate (PGR) model, initially designed for NOAA AVHRR normalised difference vegetation index (NDVI) and since adapted to MODIS NDVI, can provide PGR at spatial resolution of ~2 m with an accuracy of ~2 kg DM/ha.day when incorporating in-situ sensor data. A PGR model based on light-use efficiency (LUE) was combined with in-situ measurements from proximal weather (temperature), plant (fraction of absorbed photosynthetically active radiation, fAPAR) and soil (relative moisture) sensors to calculate the growth rate of a tall fescue pasture. Based on an initial estimate of LUEmax for the candidate pasture, followed by a process of iterating LUEmax to reduce prediction errors, the model was capable of estimating PGR with a root mean square error of 1.68 kg/ha.day (R2 = 0.96, P-value ≈ 0). The iterative process proved to be a convenient means of estimating LUE of this pasture (1.59 g DM/MJ APAR) under local conditions. The application of the LUE-PGR approach to developing an in-situ pasture growth rate monitoring system is discussed.
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Wang, H., I. C. Prentice, and J. Ni. "Primary production in forests and grasslands of China: contrasting environmental responses of light- and water-use efficiency models." Biogeosciences Discussions 9, no. 4 (April 12, 2012): 4285–321. http://dx.doi.org/10.5194/bgd-9-4285-2012.
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Abstract. An extensive data set on net primary production (NPP) in China's forests is analysed with two semi-empirical models based on the light use efficiency (LUE) and water use efficiency (WUE) concepts, respectively. Results are shown to be broadly consistent with other data sets (grassland above-ground NPP; globally extrapolated gross primary production, GPP) and published analyses. But although both models describe the data about equally well, they predict notably different responses to [CO2] and temperature. These are illustrated by sensitivity tests in which [CO2] is kept constant or doubled, temperatures are kept constant or increased by 3.5 K, and precipitation is changed by ±10%. Precipitation changes elicit similar responses in both models. The [CO2] response of the WUE model is much larger but is probably an overestimate for dense vegetation as it assumes no increase in runoff; while the [CO2] response of the LUE model is probably too small for sparse vegetation as it assumes no increase in vegetation cover. In the LUE model warming reduces total NPP with the strongest effect in South China, where the growing season cannot be further extended. In the WUE model warming increases total NPP, again with the strongest effect in South China, where abundant water supply precludes stomatal closure. The qualitative differences between the two formulations illustrate potential causes of the large differences (even in sign) in the global NPP response of dynamic global vegetation models to [CO2] and climate change. As it is not clear which response is more realistic, the issue needs to be resolved by observation and experiment.
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Zhang, Fengji, Zhijiang Zhang, Yi Long, and Ling Zhang. "Integration of Sentinel-3 OLCI Land Products and MERRA2 Meteorology Data into Light Use Efficiency and Vegetation Index-Driven Models for Modeling Gross Primary Production." Remote Sensing 13, no. 5 (March 8, 2021): 1015. http://dx.doi.org/10.3390/rs13051015.
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Accurately and reliably estimating total terrestrial gross primary production (GPP) on a large scale is of great significance for monitoring the carbon cycle process. The Sentinel-3 satellite provides the OLCI FAPAR and OTCI products, which possess a higher spatial and temporal resolution than MODIS products. However, few studies have focused on using LUE models and VI-driven models based on the Sentinel-3 satellites to estimate GPP on a large scale. The purpose of this study is to evaluate the performance of Sentinel-3 OLCI FAPAR and OTCI products combined with meteorology reanalysis data in estimating GPP at site and regional scale. Firstly, we integrated OLCI FAPAR and meteorology reanalysis data into the MODIS GPP algorithm and eddy covariance light use efficiency (EC-LUE) model (GPPMODIS-GPP and GPPEC-LUE, respectively). Then, we combined OTCI and meteorology reanalysis data with the greenness and radiation (GR) model and vegetation index (VI) model (GPPGR and GPPVI, respectively). Lastly, GPPMODIS-GPP, GPPEC-LUE, GPPGR, and GPPVI were evaluated against the eddy covariance flux data (GPPEC) at the site scale and MODIS GPP products (GPPMOD17) at the regional scale. The results showed that, at the site scale, GPPMODIS-GPP and GPPEC-LUE agreed well with GPPEC for the US-Ton site, with R2 = 0.73 and 0.74, respectively. The performance of GPPGR and GPPVI varied across different biome types. Strong correlations were obtained across deciduous broadleaf forests, mixed forests, grasslands, and croplands. At the same time, there are overestimations and underestimations in croplands, evergreen needleleaf forests and deciduous broadleaf forests. At the regional scale, the annual mean and maximum daily GPPMODIS-GPP and GPPEC-LUE agreed well with GPPMOD17 in 2017 and 2018, with R2 > 0.75. Overall, the above findings demonstrate the feasibility of using Sentinel-3 OLCI FAPAR and OTCI products combined with meteorology reanalysis data through LUE and VI-driven models to estimate GPP, and fill in the gaps for the large-scale evaluation of GPP via Sentinel-3 satellites.
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Li, Longhui, Yingping Wang, Vivek K. Arora, Derek Eamus, Hao Shi, Jing Li, Lei Cheng, et al. "Evaluating Global Land Surface Models in CMIP5: Analysis of Ecosystem Water- and Light-Use Efficiencies and Rainfall Partitioning." Journal of Climate 31, no. 8 (March 20, 2018): 2995–3008. http://dx.doi.org/10.1175/jcli-d-16-0177.1.
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Abstract Water and carbon fluxes simulated by 12 Earth system models (ESMs) that participated in phase 5 of the Coupled Model Intercomparison Project (CMIP5) over several recent decades were evaluated using three functional constraints that are derived from both model simulations, or four global datasets, and 736 site-year measurements. Three functional constraints are ecosystem water-use efficiency (WUE), light-use efficiency (LUE), and the partitioning of precipitation P into evapotranspiration (ET) and runoff based on the Budyko framework. Although values of these three constraints varied significantly with time scale and should be quite conservative if being averaged over multiple decades, the results showed that both WUE and LUE simulated by the ensemble mean of 12 ESMs were generally lower than the site measurements. Simulations by the ESMs were generally consistent with the broad pattern of energy-controlled ET under wet conditions and soil water-controlled ET under dry conditions, as described by the Budyko framework. However, the value of the parameter in the Budyko framework ω, obtained from fitting the Budyko curve to the ensemble model simulation (1.74), was larger than the best-fit value of ω to the observed data (1.28). Globally, the ensemble mean of multiple models, although performing better than any individual model simulations, still underestimated the observed WUE and LUE, and overestimated the ratio of ET to P, as a result of overestimation in ET and underestimation in gross primary production (GPP). The results suggest that future model development should focus on improving the algorithms of the partitioning of precipitation into ecosystem ET and runoff, and the coupling of water and carbon cycles for different land-use types.
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Kim, Jaewoo, Woo Hyun Kang, and Jung Eek Son. "Interpretation and Evaluation of Electrical Lighting in Plant Factories with Ray-Tracing Simulation and 3D Plant Modeling." Agronomy 10, no. 10 (October 11, 2020): 1545. http://dx.doi.org/10.3390/agronomy10101545.
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In plant factories, light is fully controllable for crop production but involves a cost. For efficient lighting, light use efficiency (LUE) should be considered as part of light environment design. The objectives of this study were to evaluate and interpret the light interception, photosynthetic rate, and LUE of lettuces under electrical lights using ray-tracing simulation. The crop architecture model was constructed by 3D scanning, and ray-tracing simulation was used to interpret light interception and photosynthesis. For evaluation of simulation reliability, measured light intensities and photosynthetic rates in a growth chamber were compared with those obtained by simulation at different planting densities. Under several scenarios modeling various factors affecting light environments, changes in light interception and LUE were interpreted. The light intensities and photosynthetic rates obtained by simulation showed good agreement with the measured values, with R2 > 0.86. With decreasing planting density, the light interception of the central plant increased by approximately 18.7%, but that of neighboring plants decreased by approximately 5.5%. Under the various scenarios, shorter lighting distances induced more heterogenetic light distribution on plants and caused lower light interception. Under a homogenous light distribution, the light intensity was optimal at approximately 360 μmol m−2 s−1 with an LUE of 6.5 g MJ−1. The results of this study can provide conceptual insights into the design of light environments in plant factories.
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Zheng, Yi, Ruoque Shen, Yawen Wang, Xiangqian Li, Shuguang Liu, Shunlin Liang, Jing M. Chen, Weimin Ju, Li Zhang, and Wenping Yuan. "Improved estimate of global gross primary production for reproducing its long-term variation, 1982–2017." Earth System Science Data 12, no. 4 (November 12, 2020): 2725–46. http://dx.doi.org/10.5194/essd-12-2725-2020.
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Abstract. Satellite-based models have been widely used to simulate vegetation gross primary production (GPP) at the site, regional, or global scales in recent years. However, accurately reproducing the interannual variations in GPP remains a major challenge, and the long-term changes in GPP remain highly uncertain. In this study, we generated a long-term global GPP dataset at 0.05∘ latitude by 0.05∘ longitude and 8 d interval by revising a light use efficiency model (i.e., EC-LUE model). In the revised EC-LUE model, we integrated the regulations of several major environmental variables: atmospheric CO2 concentration, radiation components, and atmospheric vapor pressure deficit (VPD). These environmental variables showed substantial long-term changes, which could greatly impact the global vegetation productivity. Eddy covariance (EC) measurements at 95 towers from the FLUXNET2015 dataset, covering nine major ecosystem types around the globe, were used to calibrate and validate the model. In general, the revised EC-LUE model could effectively reproduce the spatial, seasonal, and annual variations in the tower-estimated GPP at most sites. The revised EC-LUE model could explain 71 % of the spatial variations in annual GPP over 95 sites. At more than 95 % of the sites, the correlation coefficients (R2) of seasonal changes between tower-estimated and model-simulated GPP are larger than 0.5. Particularly, the revised EC-LUE model improved the model performance in reproducing the interannual variations in GPP, and the averaged R2 between annual mean tower-estimated and model-simulated GPP is 0.44 over all 55 sites with observations longer than 5 years, which is significantly higher than those of the original EC-LUE model (R2=0.36) and other LUE models (R2 ranged from 0.06 to 0.30 with an average value of 0.16). At the global scale, GPP derived from light use efficiency models, machine learning models, and process-based biophysical models shows substantial differences in magnitude and interannual variations. The revised EC-LUE model quantified the mean global GPP from 1982 to 2017 as 106.2±2.9 Pg C yr−1 with the trend 0.15 Pg C yr−1. Sensitivity analysis indicated that GPP simulated by the revised EC-LUE model was sensitive to atmospheric CO2 concentration, VPD, and radiation. Over the period of 1982–2017, the CO2 fertilization effect on the global GPP (0.22±0.07 Pg C yr−1) could be partly offset by increased VPD (-0.17±0.06 Pg C yr−1). The long-term changes in the environmental variables could be well reflected in global GPP. Overall, the revised EC-LUE model is able to provide a reliable long-term estimate of global GPP. The GPP dataset is available at https://doi.org/10.6084/m9.figshare.8942336.v3 (Zheng et al., 2019).
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Yuan, W., S. Liu, W. Cai, W. Dong, J. Chen, A. Arain, P. D. Blanken, et al. "Are vegetation-specific model parameters required for estimating gross primary production?" Geoscientific Model Development Discussions 6, no. 4 (November 4, 2013): 5475–88. http://dx.doi.org/10.5194/gmdd-6-5475-2013.
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Abstract. Models of gross primary production (GPP) are currently parameterized with vegetation-specific parameter sets and therefore require accurate information on the distribution of vegetation to drive them. Can this parameterization scheme be replaced with a vegetation-invariant set of parameter that can maintain or increase model applicability by reducing errors introduced from the uncertainty of land cover classification? Based on the measurements of ecosystem carbon fluxes from 150 globally distributed sites in a range of vegetation types, we examined the predictive capacity of seven light use efficiency (LUE) models. Two model experiments were conducted: (i) a constant set of parameters for various vegetation types and (ii) vegetation-specific parameters. The results showed no significant differences in model performances to simulate GPP while using both sets of parameters. These results indicate that a universal set of parameters, which is independent of vegetation cover type and characteristics can be adopted in prevalent LUE models. Availability of this well tested and universal set of parameters would help to improve the accuracy and applicability of LUE models in various biomes and geographic regions.
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Zhang, Helin, Jia Bai, Rui Sun, Yan Wang, Yuhao Pan, Patrick McGuire, and Zhiqiang Xiao. "Improved Global Gross Primary Productivity Estimation by Considering Canopy Nitrogen Concentrations and Multiple Environmental Factors." Remote Sensing 15, no. 3 (January 24, 2023): 698. http://dx.doi.org/10.3390/rs15030698.
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The terrestrial gross primary productivity (GPP) plays a crucial role in regional or global ecological environment monitoring and carbon cycle research. Many previous studies have produced multiple products using different models, but there are still significant differences between these products. This study generated a global GPP dataset (NI-LUE GPP) with 0.05° spatial resolution and at 8 day-intervals from 2001 to 2018 based on an improved light use efficiency (LUE) model that simultaneously considered temperature, water, atmospheric CO2 concentrations, radiation components, and nitrogen (N) index. To simulate the global GPP, we mapped the global optimal ecosystem temperatures (Topteco) using satellite-retrieved solar-induced chlorophyll fluorescence (SIF) and applied it to calculate temperature stress. In addition, green chlorophyll index (CIgreen), which had a strong correlation with the measured canopy N concentrations (r = 0.82), was selected as the vegetation index to characterize the canopy N concentrations to calculate the spatiotemporal dynamic maximum light use efficiency (εmax). Multiple existing global GPP datasets were used for comparison. Verified by FLUXNET GPP, our product performed well on daily and yearly scales. NI-LUE GPP indicated that the mean global annual GPP is 129.69 ± 3.11 Pg C with an increasing trend of 0.53 Pg C/yr from 2001 to 2018. By calculating the SPAtial Efficiency (SPAEF) with other products, we found that NI-LUE GPP has good spatial consistency, which indicated that our product has a reasonable spatial pattern. This product provides a reliable and alternative dataset for large-scale carbon cycle research and monitoring long-term GPP variations.
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Schull, M. A., M. C. Anderson, R. Houborg, A. Gitelson, and W. P. Kustas. "Thermal-based modeling of coupled carbon, water, and energy fluxes using nominal light use efficiencies constrained by leaf chlorophyll observations." Biogeosciences 12, no. 5 (March 11, 2015): 1511–23. http://dx.doi.org/10.5194/bg-12-1511-2015.
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Abstract. Recent studies have shown that estimates of leaf chlorophyll content (Chl), defined as the combined mass of chlorophyll a and chlorophyll b per unit leaf area, can be useful for constraining estimates of canopy light use efficiency (LUE). Canopy LUE describes the amount of carbon assimilated by a vegetative canopy for a given amount of absorbed photosynthetically active radiation (APAR) and is a key parameter for modeling land-surface carbon fluxes. A carbon-enabled version of the remote-sensing-based two-source energy balance (TSEB) model simulates coupled canopy transpiration and carbon assimilation using an analytical sub-model of canopy resistance constrained by inputs of nominal LUE (βn), which is modulated within the model in response to varying conditions in light, humidity, ambient CO2 concentration, and temperature. Soil moisture constraints on water and carbon exchange are conveyed to the TSEB-LUE indirectly through thermal infrared measurements of land-surface temperature. We investigate the capability of using Chl estimates for capturing seasonal trends in the canopy βn from in situ measurements of Chl acquired in irrigated and rain-fed fields of soybean and maize near Mead, Nebraska. The results show that field-measured Chl is nonlinearly related to βn, with variability primarily related to phenological changes during early growth and senescence. Utilizing seasonally varying βn inputs based on an empirical relationship with in situ measured Chl resulted in improvements in carbon flux estimates from the TSEB model, while adjusting the partitioning of total water loss between plant transpiration and soil evaporation. The observed Chl–βn relationship provides a functional mechanism for integrating remotely sensed Chl into the TSEB model, with the potential for improved mapping of coupled carbon, water, and energy fluxes across vegetated landscapes.
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Schull, M. A., M. C. Anderson, R. Houborg, A. Gitelson, and W. P. Kustas. "Thermal-based modeling of coupled carbon, water and energy fluxes using nominal light use efficiencies constrained by leaf chlorophyll observations." Biogeosciences Discussions 11, no. 10 (October 2, 2014): 14133–71. http://dx.doi.org/10.5194/bgd-11-14133-2014.
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Abstract. Recent studies have shown that estimates of leaf chlorophyll content (Chl), defined as the combined mass of chlorophyll a and chlorophyll b per unit leaf area, can be useful for constraining estimates of canopy light-use-efficiency (LUE). Canopy LUE describes the amount of carbon assimilated by a vegetative canopy for a given amount of Absorbed Photosynthetically Active Radiation (APAR) and is a key parameter for modeling land-surface carbon fluxes. A carbon-enabled version of the remote sensing-based Two-Source Energy Balance (TSEB) model simulates coupled canopy transpiration and carbon assimilation using an analytical sub-model of canopy resistance constrained by inputs of nominal LUE (βn), which is modulated within the model in response to varying conditions in light, humidity, ambient CO2 concentration and temperature. Soil moisture constraints on water and carbon exchange are conveyed to the TSEB-LUE indirectly through thermal infrared measurements of land-surface temperature. We investigate the capability of using Chl estimates for capturing seasonal trends in the canopy βn from in situ measurements of Chl acquired in irrigated and rain-fed fields of soybean and maize near Mead, Nebraska. The results show that field-measured Chl is non-linearly related to βn, with variability primarily related to phenological changes during early growth and senescence. Utilizing seasonally varying βn inputs based on an empirical relationship with in-situ measured Chl resulted in improvements in carbon flux estimates from the TSEB model, while adjusting the partitioning of total water loss between plant transpiration and soil evaporation. The observed Chl-βn relationship provides a functional mechanism for integrating remotely sensed Chl into the TSEB model, with the potential for improved mapping of coupled carbon, water, and energy fluxes across vegetated landscapes.
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Chen, Jinghua, Qian Zhang, Bin Chen, Yongguang Zhang, Li Ma, Zhaohui Li, Xiaokang Zhang, Yunfei Wu, Shaoqiang Wang, and Robert A. Mickler. "Evaluating Multi-Angle Photochemical Reflectance Index and Solar-Induced Fluorescence for the Estimation of Gross Primary Production in Maize." Remote Sensing 12, no. 17 (August 30, 2020): 2812. http://dx.doi.org/10.3390/rs12172812.
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The photochemical reflectance index (PRI) has been suggested as an indicator of light use efficiency (LUE), and for use in the improvement of estimating gross primary production (GPP) in LUE models. Over the last two decades, solar-induced fluorescence (SIF) observations from remote sensing have been used to evaluate the distribution of GPP over a range of spatial and temporal scales. However, both PRI and SIF observations have been decoupled from photosynthesis under a variety of non-physiological factors, i.e., sun-view geometry and environmental variables. These observations are important for estimating GPP but rarely reported in the literature. In our study, multi-angle PRI and SIF observations were obtained during the 2018 growing season in a maize field. We evaluated a PRI-based LUE model for estimating GPP, and compared it with the direct estimation of GPP using concurrent SIF measurements. Our results showed that the observed PRI varied with view angles and that the averaged PRI from the multi-angle observations exhibited better performance than the single-angle observed PRI for estimating LUE. The PRI-based LUE model when compared to SIF, demonstrated a higher ability to capture the diurnal dynamics of GPP (the coefficient of determination (R2) = 0.71) than the seasonal changes (R2 = 0.44), while the seasonal GPP variations were better estimated by SIF (R2 = 0.50). Based on random forest analyses, relative humidity (RH) was the most important driver affecting diurnal GPP estimation using the PRI-based LUE model. The SIF-based linear model was most influenced by photosynthetically active radiation (PAR). The SIF-based linear model did not perform as well as the PRI-based LUE model under most environmental conditions, the exception being clear days (the ratio of direct and diffuse sky radiance > 2). Our study confirms the utility of multi-angle PRI observations in the estimation of GPP in LUE models and suggests that the effects of changing environmental conditions should be taken into account for accurately estimating GPP with PRI and SIF observations.
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Joiner, Joanna, Yasuko Yoshida, Yao Zhang, Gregory Duveiller, Martin Jung, Alexei Lyapustin, Yujie Wang, and Compton Tucker. "Estimation of Terrestrial Global Gross Primary Production (GPP) with Satellite Data-Driven Models and Eddy Covariance Flux Data." Remote Sensing 10, no. 9 (August 23, 2018): 1346. http://dx.doi.org/10.3390/rs10091346.
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We estimate global terrestrial gross primary production (GPP) based on models that use satellite data within a simplified light-use efficiency framework that does not rely upon other meteorological inputs. Satellite-based geometry-adjusted reflectances are from the MODerate-resolution Imaging Spectroradiometer (MODIS) and provide information about vegetation structure and chlorophyll content at both high temporal (daily to monthly) and spatial (∼1 km) resolution. We use satellite-derived solar-induced fluorescence (SIF) to identify regions of high productivity crops and also evaluate the use of downscaled SIF to estimate GPP. We calibrate a set of our satellite-based models with GPP estimates from a subset of distributed eddy covariance flux towers (FLUXNET 2015). The results of the trained models are evaluated using an independent subset of FLUXNET 2015 GPP data. We show that variations in light-use efficiency (LUE) with incident PAR are important and can be easily incorporated into the models. Unlike many LUE-based models, our satellite-based GPP estimates do not use an explicit parameterization of LUE that reduces its value from the potential maximum under limiting conditions such as temperature and water stress. Even without the parameterized downward regulation, our simplified models are shown to perform as well as or better than state-of-the-art satellite data-driven products that incorporate such parameterizations. A significant fraction of both spatial and temporal variability in GPP across plant functional types can be accounted for using our satellite-based models. Our results provide an annual GPP value of ∼140 Pg C year - 1 for 2007 that is within the range of a compilation of observation-based, model, and hybrid results, but is higher than some previous satellite observation-based estimates.
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Shu, Yamei, Shuguang Liu, Zhao Wang, Jingfeng Xiao, Yi Shi, Xi Peng, Haiqiang Gao, et al. "Effects of Aerosols on Gross Primary Production from Ecosystems to the Globe." Remote Sensing 14, no. 12 (June 8, 2022): 2759. http://dx.doi.org/10.3390/rs14122759.
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Aerosols affect the gross primary productivity (GPP) of plants by absorbing and scattering solar radiation. However, it is still an open question whether and to what extent the effects of aerosol on the diffuse fraction (Df) can enhance GPP globally. We quantified the aerosol diffuse fertilization effect (DFE) and incorporated it into a light use efficiency (LUE) model, EC-LUE. The new model is driven by aerosol optical depth (AOD) data and is referred to as AOD-LUE. The eddy correlation variance (EC) of the FLUXNET2015 dataset was used to calibrate and validate the model. The results showed that the newly developed AOD-LUE model improved the performance in simulating GPP across all ecosystem types (R2 from 0.6 to 0.68), with the highest performance for mixed forest (average R2 from 0.71 to 0.77) and evergreen broadleaf forest (average R2 from 0.34 to 0.45). The maximum LUE of diffuse photosynthetic active radiation (PAR) (3.61 g C m−2 MJ−1) was larger than that of direct PAR (1.68 g C m−2 MJ−1) through parameter optimization, indicating that the aerosol DFE seriously affects the estimation of GPP, and the separation of diffuse PAR and direct PAR in the GPP model is necessary. In addition, we used AOD-LUE to quantify the impact of aerosol on GPP. Specifically, aerosols impaired GPP in closed shrub (CSH) by 6.45% but enhanced the GPP of grassland (GRA) and deciduous broadleaf forest (DBF) by 3.19% and 2.63%, respectively. Our study stresses the importance of understanding aerosol-radiation interactions and incorporating aerosol effects into regional and global GPP models.
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Xie, Xinyao, Ainong Li, Huaan Jin, Jinhu Bian, Zhengjian Zhang, and Xi Nan. "Comparing Three Remotely Sensed Approaches for Simulating Gross Primary Productivity over Mountainous Watersheds: A Case Study in the Wanglang National Nature Reserve, China." Remote Sensing 13, no. 18 (September 8, 2021): 3567. http://dx.doi.org/10.3390/rs13183567.
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Light Use Efficiency (LUE), Vegetation Index (VI)-based, and process-based models are the main approaches for spatially continuous gross primary productivity (GPP) estimation. However, most current GPP models overlook the effects of topography on the vegetation photosynthesis process. Based on the structures of a two-leaf LUE model (TL-LUE), a VI-based model (temperature and greenness, TG), and a process-based model (Boreal Ecosystem Productivity Simulator, BEPS), three models, named mountain TL-LUE (MTL-LUE), mountain TG (MTG), and BEPS-TerrainLab, have been proposed to improve GPP estimation over mountainous areas. The GPP estimates from the three mountain models have been proven to align more closely with tower-based GPP than those from the original models at the site scale, but their abilities to characterize the spatial variation of GPP at the watershed scale are not yet known. In this work, the GPP estimates from three LUE models (i.e., MOD17, TL-LUE, and MTL-LUE), two VI-based models (i.e., TG and MTG), and two process-based models (i.e., BEPS and BEPS-TerrainLab) were compared for a mountainous watershed. At the watershed scale, the annual GPP estimates from MTL-LUE, MTG, and BTL were found to have a higher spatial variation than those from the original models (increasing the spatial coefficient of variation by 6%, 8%, and 22%), highlighting that incorporating topographic information into GPP models might improve understanding of the high spatial heterogeneity of the vegetation photosynthesis process over mountainous areas. Obvious discrepancies were also observed in the GPP estimates from MTL-LUE, MTG, and BTL, with determination coefficients ranging from 0.02–0.29 and root mean square errors ranging from 399–821 gC m−2yr−1. These GPP discrepancies mainly stem from the different (1) structures of original LUE, VI, and process models, (2) assumptions associated with the effects of topography on photosynthesis, (3) input data, and (4) values of sensitive parameters. Our study highlights the importance of considering surface topography when modeling GPP over mountainous areas, and suggests that more attention should be given to the discrepancy of GPP estimates from different models.
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Ediz; BAYRAMİN, ÜNAL. "Primary production estimation of Çankırı province’s rangelands using light use efficiency (LUE) model with satellite data and agrometshell module." Tarım Bilimleri Dergisi 22, no. 4 (2016): 555–65. http://dx.doi.org/10.1501/tarimbil_0000001414.
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Christina, M., Y. Nouvellon, J. P. Laclau, J. L. Stape, O. C. Campoe, and G. le Maire. "Sensitivity and uncertainty analysis of the carbon and water fluxes at the tree scale in Eucalyptus plantations using a metamodeling approach." Canadian Journal of Forest Research 46, no. 3 (March 2016): 297–309. http://dx.doi.org/10.1139/cjfr-2015-0173.
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Understanding the consequences of changes in climatic and biological drivers on tree carbon and water fluxes is essential in forestry. Using a metamodeling approach, sensitivity and uncertainty analyses were carried out for a tree-scale model (MAESPA) to isolate the effects of climate, morphological and physiological traits, and intertree competition on the absorption of photosynthetically active radiation (APAR), gross primary production (GPP), transpiration (TR), light use efficiency (LUE), and water use efficiency (WUE) in clonal Eucalyptus plantations. The metamodel predicting daily TR was validated using one year of sap flow measurements and showed close agreement with the measurements (mean percentage error = 11%, n = 2155). Simulations showed that APAR, GPP, and TR were very sensitive to the tree morphology and to a competition index representing its local environment. LUE and WUE were, in addition, very sensitive to the natural variability of the physiological leaf and root parameters. A maximum percentage error of 10% in these parameters leads to 18%, 17%, 16%, 9%, and 18% uncertainty for APAR, GPP, TR, LUE, and WUE, respectively. The uncertainties in TR were highest for the smallest trees. This study highlighted the need to take account of the spatial and temporal variability of tree traits and environmental conditions for simulations at the tree scale.
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Moore, Caitlin E., Jason Beringer, Bradley Evans, Lindsay B. Hutley, and Nigel J. Tapper. "Tree–grass phenology information improves light use efficiency modelling of gross primary productivity for an Australian tropical savanna." Biogeosciences 14, no. 1 (January 10, 2017): 111–29. http://dx.doi.org/10.5194/bg-14-111-2017.
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Abstract. The coexistence of trees and grasses in savanna ecosystems results in marked phenological dynamics that vary spatially and temporally with climate. Australian savannas comprise a complex variety of life forms and phenologies, from evergreen trees to annual/perennial grasses, producing a boom–bust seasonal pattern of productivity that follows the wet–dry seasonal rainfall cycle. As the climate changes into the 21st century, modification to rainfall and temperature regimes in savannas is highly likely. There is a need to link phenology cycles of different species with productivity to understand how the tree–grass relationship may shift in response to climate change. This study investigated the relationship between productivity and phenology for trees and grasses in an Australian tropical savanna. Productivity, estimated from overstory (tree) and understory (grass) eddy covariance flux tower estimates of gross primary productivity (GPP), was compared against 2 years of repeat time-lapse digital photography (phenocams). We explored the phenology–productivity relationship at the ecosystem scale using Moderate Resolution Imaging Spectroradiometer (MODIS) vegetation indices and flux tower GPP. These data were obtained from the Howard Springs OzFlux/Fluxnet site (AU-How) in northern Australia. Two greenness indices were calculated from the phenocam images: the green chromatic coordinate (GCC) and excess green index (ExG). These indices captured the temporal dynamics of the understory (grass) and overstory (trees) phenology and were correlated well with tower GPP for understory (r2 = 0.65 to 0.72) but less so for the overstory (r2 = 0.14 to 0.23). The MODIS enhanced vegetation index (EVI) correlated well with GPP at the ecosystem scale (r2 = 0.70). Lastly, we used GCC and EVI to parameterise a light use efficiency (LUE) model and found it to improve the estimates of GPP for the overstory, understory and ecosystem. We conclude that phenology is an important parameter to consider in estimating GPP from LUE models in savannas and that phenocams can provide important insights into the phenological variability of trees and grasses.
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Lin, Xiaofeng, Baozhang Chen, Huifang Zhang, Fei Wang, Jing Chen, Lifeng Guo, and Yawen Kong. "Effects of the Temporal Aggregation and Meteorological Conditions on the Parameter Robustness of OCO-2 SIF-Based and LUE-Based GPP Models for Croplands." Remote Sensing 11, no. 11 (June 3, 2019): 1328. http://dx.doi.org/10.3390/rs11111328.
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Global retrieval of solar-induced chlorophyll fluorescence (SIF) using remote sensing by means of satellites has been developed rapidly in recent years. Exploring how SIF could improve the characterization of photosynthesis and its role in the land surface carbon cycle has gradually become a very important and active area. However, compared with other gross primary production (GPP) models, the robustness of the parameterization of the SIF model under different circumstances has rarely been investigated. In this study, we examined and compared the effects of temporal aggregation and meteorological conditions on the stability of model parameters for the SIF model ( ε / S I F yield ), the one-leaf light-use efficiency (SL-LUE) model ( ε max ), and the two-leaf LUE (TL-LUE) model ( ε msu and ε msh ). The three models were parameterized based on a maize–wheat rotation eddy-covariance flux tower data in Yucheng, Shandong Province, China by using the Metropolis–Hasting algorithm. The results showed that the values of the ε / S I F yield and ε max were similarly robust and considerably more stable than ε msu and ε msh for all temporal aggregation levels. Under different meteorological conditions, all the parameters showed a certain degree of fluctuation and were most affected at the mid-day scale, followed by the monthly scale and finally at the daily scale. Nonetheless, the averaged coefficient of variation ( C V ) of ε / S I F yield was relatively small (15.0%) and was obviously lower than ε max ( C V = 27.0%), ε msu ( C V = 43.2%), and ε msh ( C V = 53.1%). Furthermore, the SIF model’s performance for estimating GPP was better than that of the SL-LUE model and was comparable to that of the TL-LUE model. This study indicates that, compared with the LUE-based models, the SIF-based model without climate-dependence is a good predictor of GPP and its parameter is more likely to converge for different temporal aggregation levels and under varying environmental restrictions in croplands. We suggest that more flux tower data should be used for further validation of parameter convergence in other vegetation types.
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Lopez M., Miguel Ángel, Bernardo Chaves C., and Víctor Julio Flórez R. "Potential growing model for the standard carnation cv. Delphi." Agronomía Colombiana 32, no. 2 (May 1, 2014): 196–204. http://dx.doi.org/10.15446/agron.colomb.v32n2.43737.
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The cut flower business requires exact synchronicity between product offer and demand in consumer countries. Having tools that help to improve this synchronicity through predictions or crop growth monitoring could provide an important advantage to program standards and corrective agronomic practices. At the Centro de Biotecnología Agropecuaria, SENA (SENA's Biotechnology, Agricultural and Livestock Center), located in Mosquera, Cundinamarca, a trial with standard carnation cv. Delphi grown under greenhouse conditions was carried out. The objective of this study was to build a simple model of dry matter (DM) production and partition of on-carnation flower stems. The model was based on the photosynthetically active radiation (PAR) MJ m-2 d-1 and temperature as exogenous variables and assumed no water or nutrient limitations or damage caused by pests, disease or weeds. In this model, the daily DM increase depended on the PAR, the light fraction intercepted by the foliage (FLINT) and the light use efficiency (LUE) g MJ-1. The LUE in the vegetative and reproductive stages reached values of 1.31 and 0.74 g MJ-1, respectively. The estimated extinction coefficient (k) value corresponded to 0.53 and the maximum FLINT was between 0.79 and 0.82. Partitioning between the plant vegetative and reproductive stages was modeled based on the hypothesis that the partition is regulated by the source sink relationship. The estimated partition coefficient for the vegetative stage of the leaves was 0.63 and 0.37 for the stems. During the reproductive stage, the partitioning coefficients of leaves, stems and flower buds were 0.05, 0.74, and 0.21, respectively.
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KAGE, H., C. ALT, and H. STÜTZEL. "Aspects of nitrogen use efficiency of cauliflower II. Productivity and nitrogen partitioning as influenced by N supply." Journal of Agricultural Science 141, no. 1 (August 2003): 17–29. http://dx.doi.org/10.1017/s0021859603003538.
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Based on studies concerning dry matter (DM) partitioning, DM production, root growth, nitrogen (N) contents of cauliflower organs and soil nitrate availability (first part of the paper Kage et al. 2003b), an integrated simulation model for the cauliflower/soil system is constructed, parameterized and evaluated.Dry matter production of cauliflower is described and predicted using a simple light use efficiency (LUE) based approach assuming a linear decrease of light use efficiency with increasing differences between actual, NCAProt, and ‘optimal’, NCAoptProt area based leaf protein concentrations. For 2 experimental years the decline of LUE with decreasing nitrogen concentration was at 0·82 and 0·75 (g DM×m2/(MJ×g N)). Using the parameters obtained from the first experimental year shoot DM production data of cauliflower from five independent experiments with varied N supply containing intermediate harvests could be predicted with a residual mean square error (RMSE) of 72 g/m2 for intermediate harvest DM values ranging from about 50 to 900 g/m2. Nitrogen uptake and partitioning of cauliflower was simulated using functions describing an organ size dependent decline of N content. Leaf nitrate was considered explicitly as a radiation intensity dependent pool, mobilized first under N deficiency. The curd was assumed to have a sink priority for nitrogen. The model predicted shoot N uptake including data of intermediate harvest with a RMSE of 2·4 g/m2 for intermediate harvest N values ranging from about 3 to 30 g/m2. Nitrogen uptake of cauliflower at final harvest was correlated to final leaf number.A scenario simulation was carried out to quantify seasonal variation in N uptake of cauliflower cultivars under unrestricted N availability. Due to variations in the length of the vernalization phase, simulated shoot N uptake ranged from about 260 kg N/ha for spring planted crops to about 290 kg N/ha for summer planted crops of the cultivar ‘Fremont’. The cultivar ‘Linday’, which shows a more severe delay of vernalization under high temperatures, shows on average a larger shoot N uptake for summer planted crops of about 320 kg N/ha and a much larger variation of shoot N uptake.
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Chen, Siyuan, Lichun Sui, Liangyun Liu, and Xinjie Liu. "Effect of the Partitioning of Diffuse and Direct APAR on GPP Estimation." Remote Sensing 14, no. 1 (December 23, 2021): 57. http://dx.doi.org/10.3390/rs14010057.
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Accurate estimation of gross primary productivity (GPP) is necessary to better understand the interaction of global terrestrial ecosystems with climate change and human activities. Light use efficiency (LUE)-based GPP models are widely used for retrieving several GPP products with various temporal and spatial resolutions. However, most LUE-based models assume a clear-sky condition, and the influence of diffuse radiation on GPP estimations has not been well considered. In this paper, a diffuse and direct (DDA) absorbed photosynthetically active radiation (APAR)-based method is proposed for better estimation of half-hourly GPP, which partitions APAR under diffuse and direct radiation conditions. Firstly, energy balance residual (EBR) FAPAR, moderate resolution imaging spectroradiometer (MODIS) leaf area index (LAI) (MCD15A2H) and clumping index (CI) products, as well as solar radiation records supplied by FLUXNET2015 were used to calculate diffuse and direct APAR at a half-hourly scale. Then, an eddy covariance-LUE (EC-LUE) model and meteorological observations from FLUXNET2015 data sets were used for obtaining corresponding LUE values. A co-variation relationship between LUE and diffuse fraction was observed, and the LUE was higher under more diffuse radiation conditions. Finally, the DDA-based method was tested using the half-hourly FLUXNET GPP and compared with half-hourly GPP calculated using total APAR (GPP_TA). The results indicated that the half-hourly GPP estimated using the DDA-based method (GPP_DDA) was more accurate, giving higher R2 values, lower RMSE and RMSE* values (R2 varied from 0.565 to 0.682, RMSE ranged from 3.219 to 12.405 and RMSE* were within the range of 2.785 to 8.395) than the GPP_TA (R2 varied from 0.558 to 0.653, RMSE ranged from 3.407 to 13.081 and RMSE* were within the range of 3.321 to 9.625) across FLUXNET sites within different vegetation types. This study explored the effects of partitioning the diffuse and direct APAR on half-hourly GPP estimations, which demonstrates a higher agreement with FLUXNET GPP than total APAR-based GPP.
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Song, Conghe, Matthew P. Dannenberg, and Taehee Hwang. "Optical remote sensing of terrestrial ecosystem primary productivity." Progress in Physical Geography: Earth and Environment 37, no. 6 (November 8, 2013): 834–54. http://dx.doi.org/10.1177/0309133313507944.
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Terrestrial ecosystem primary productivity is a key indicator of ecosystem functions, including, but not limited to, carbon storage, provision of food and fiber, and sustaining biodiversity. However, measuring terrestrial ecosystem primary productivity in the field is extremely laborious and expensive. Optical remote sensing has revolutionized our ability to map terrestrial ecosystem primary productivity over large areas ranging from regions to the entire globe in a repeated, cost-efficient manner. This progress report reviews the theory and practice of mapping terrestrial primary productivity using optical remotely sensed data. Terrestrial ecosystem primary productivity is generally estimated with optical remote sensing via one of the following approaches: (1) empirical estimation from spectral vegetation indices; (2) models that are based on light-use-efficiency (LUE) theory; (3) models that are not based on LUE theory, but the biophysical processes of plant photosynthesis. Among these three, models based on LUE are the primary approach because there is a solid physical basis for the linkage between fraction of absorbed photosynthetically active radiation (fAPAR) and remotely sensed spectral signatures of vegetation. There has been much inconsistency in the literature with regard to the appropriate value for LUE. This issue should be resolved with the ongoing efforts aimed at direct mapping of LUE from remote sensing. At the same time, major efforts have been dedicated to mapping vegetation canopy biochemical composition via imaging spectroscopy for use in process-based models to estimating primary productivity. In so doing, optical remote sensing will continue to play a vital role in global carbon cycle science research.
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Xu, Wenshuo, Na Lu, Masao Kikuchi, and Michiko Takagaki. "Continuous Lighting and High Daily Light Integral Enhance Yield and Quality of Mass-Produced Nasturtium (Tropaeolum majus L.) in Plant Factories." Plants 10, no. 6 (June 12, 2021): 1203. http://dx.doi.org/10.3390/plants10061203.
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Nasturtium (Tropaeolum majus L.), as a medicinal plant, has a high phenolic content in its leaves and flowers. It is often used in salads as a dietary vegetable. Attracting strong demand, it could be a good candidate crop for a plant factory with artificial lighting (PFAL) that can achieve the mass production of high-quality crops with high productivity by regulating environmental conditions such as light. In this study, two experiments were conducted to investigate the effects of continuous lighting (CL) and different daily light integrals (DLIs) under CL on the growth, secondary metabolites, and light use efficiency (LUE) of nasturtium, all of which are essential in the successful cultivation in PFALs. In Experiment 1, two lighting models, the same DLI of 17.3 mol m-2 d-1 but different light periods (24 and 16 h) with different light intensities (200 and 300 µmol m−2 s−1, respectively), were applied to nasturtium. The results showed that leaf production, secondary metabolites, and LUE were higher under the 24-h CL treatment than under the 16-h non-CL treatment. In Experiment 2, three DLI levels (17.3, 25.9, and 34.6 mol m-2 d-1) under the CL condition were applied. The results showed that the growth parameters were positively correlated with the DLI levels under CL. The lowest DLI had the highest LUE. We conclude that the mass production of nasturtium under CL in PFALs is feasible, and the yield increases as DLI increases from 17.3 to 34.6 mol m-2 d-1 under CL without causing physiological stress on plants.
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Balzarolo, M., S. Boussetta, G. Balsamo, A. Beljaars, F. Maignan, J. C. Calvet, S. Lafont, et al. "Evaluating the potential of large-scale simulations to predict carbon fluxes of terrestrial ecosystems over a European Eddy Covariance network." Biogeosciences 11, no. 10 (May 20, 2014): 2661–78. http://dx.doi.org/10.5194/bg-11-2661-2014.
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Abstract. This paper reports a comparison between large-scale simulations of three different land surface models (LSMs), ORCHIDEE, ISBA-A-gs and CTESSEL, forced with the same meteorological data, and compared with the carbon fluxes measured at 32 eddy covariance (EC) flux tower sites in Europe. The results show that the three simulations have the best performance for forest sites and the poorest performance for cropland and grassland sites. In addition, the three simulations have difficulties capturing the seasonality of Mediterranean and sub-tropical biomes, characterized by dry summers. This reduced simulation performance is also reflected in deficiencies in diagnosed light-use efficiency (LUE) and vapour pressure deficit (VPD) dependencies compared to observations. Shortcomings in the forcing data may also play a role. These results indicate that more research is needed on the LUE and VPD functions for Mediterranean and sub-tropical biomes. Finally, this study highlights the importance of correctly representing phenology (i.e. leaf area evolution) and management (i.e. rotation–irrigation for cropland, and grazing–harvesting for grassland) to simulate the carbon dynamics of European ecosystems and the importance of ecosystem-level observations in model development and validation.
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Zhou, Yanlian, Xiaocui Wu, Weimin Ju, Leiming Zhang, Zhi Chen, Wei He, Yibo Liu, and Yang Shen. "Modeling the Effects of Global and Diffuse Radiation on Terrestrial Gross Primary Productivity in China Based on a Two-Leaf Light Use Efficiency Model." Remote Sensing 12, no. 20 (October 14, 2020): 3355. http://dx.doi.org/10.3390/rs12203355.
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Solar radiation significantly affects terrestrial gross primary productivity (GPP). However, the relationship between GPP and solar radiation is nonlinear because it is affected by diffuse radiation. Solar radiation has undergone a shift from darker to brighter values over the past 30 years in China. However, the effects on GPP of variation in solar radiation because of changes in diffuse radiation are unclear. In this study, national global radiation in conjunction with other meteorological data and remotely sensed data were used as input into a two-leaf light use efficiency model (TL-LUE) that simulated GPP separately for sunlit and shaded leaves for the period from 1981 to 2012. The results showed that the nationwide annual global radiation experienced a significant reduction (2.18 MJ m−2 y−1; p < 0.05) from 1981 to 2012, decreasing by 1.3% over this 32-year interval. However, the nationwide annual diffuse radiation increased significantly (p < 0.05). The reduction in global radiation from 1981 to 2012 decreased the average annual GPP of terrestrial ecosystems in China by 0.09 Pg C y−1, whereas the gain in diffuse radiation from 1981 to 2012 increased the average annual GPP in China by about 50%. Therefore, the increase in canopy light use efficiency under higher diffuse radiation only partially offsets the loss of GPP caused by lower global radiation.
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Gómez-Giráldez, Pedro J., Elisabet Carpintero, Mario Ramos, Cristina Aguilar, and María P. González-Dugo. "Effect of the water stress on gross primary production modeling of a Mediterranean oak savanna ecosystem." Proceedings of the International Association of Hydrological Sciences 380 (December 18, 2018): 37–43. http://dx.doi.org/10.5194/piahs-380-37-2018.
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Abstract. Dehesa ecosystem consists of widely-spaced oak trees combined with crops, pasture and Mediterranean shrubs. It is located in the southwest of the Iberian Peninsula, where water scarcity is recurrent, severely affecting the multiple productions and services of the ecosystem. Upscaling in situ Gross Primary Production (GPP) estimates in these areas is challenging for regional and global studies, given the significant spatial variability of plant functional types and the vegetation stresses usually present. The estimation of GPP is often addressed using light use efficiency models (LUE-models). Under soil water deficit conditions, biomass production is reduced below its potential rate. This work investigates the effect of different parameterizations to account for water stress on GPP estimates and their agreement with observations. Ground measurements of GPP are obtained using an Eddy Covariance (EC) system installed over an experimental site located in Córdoba, Spain. GPP is estimated with a LUE-model in the footprint of the EC tower using several approaches: a fixed value taken from previous literature; a fixed value modified by daily weather conditions; and both formulations modified by an additional coefficient to explicitly consider the vegetation water stress. The preliminary results obtained during two hydrological years (2015/2016 and 2016/2017) are compared, focusing on specific wet and dry periods.
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Zhang, Liangxia, Decheng Zhou, Jiangwen Fan, Qun Guo, Shiping Chen, Ranghui Wang, and Yuzhe Li. "Contrasting the Performance of Eight Satellite-Based GPP Models in Water-Limited and Temperature-Limited Grassland Ecosystems." Remote Sensing 11, no. 11 (June 3, 2019): 1333. http://dx.doi.org/10.3390/rs11111333.
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Models constitute the primary approaches for predicting terrestrial ecosystem gross primary production (GPP) at regional and global scales. Many satellite-based GPP models have been developed due to the simple algorithms and the low requirements of model inputs. The performances of these models are well documented at the biome level. However, their performances among vegetation subtypes limited by different environmental stresses within a biome remains largely unexplored. Taking grasslands in northern China as an example, we compared the performance of eight satellite-based GPP models, including three light-use efficiency (LUE) models (vegetation photosynthesis model (VPM), modified VPM (MVPM), and moderate resolution imaging spectroradiometer GPP algorithm (MODIS-GPP)) and five statistical models (temperature and greenness model (TG), greenness and radiation model (GR), vegetation index model (VI), alpine vegetation model (AVM), and photosynthetic capacity model (PCM)), between the water-limited temperate steppe and the temperature-limited alpine meadow based on 16 site-year GPP estimates at four eddy covariance (EC) flux towers. The results showed that all the GPP models performed better in the alpine meadow, particularly in the alpine shrub meadow (R2 ≥ 0.84), than in the temperate steppe (R2 ≤ 0.68). The performance varied greatly among the models in the temperate steppe, while slight intermodel differences existed in the alpine meadow. Overall, MVPM (of the LUE models) and VI (of the statistical models) were the two best-performing models in the temperate steppe due to their better representation of the effect of water stress on vegetation productivity. Additionally, we found that the relatively worse model performances in the temperate steppe were seriously exaggerated by drought events, which may occur more frequently in the future. This study highlights the varying performances of satellite-based GPP models among vegetation subtypes of a biome in different precipitation years and suggests priorities for improving the water stress variables of these models in future efforts.
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Gamon, J. A. "Reviews and Syntheses: optical sampling of the flux tower footprint." Biogeosciences 12, no. 14 (July 30, 2015): 4509–23. http://dx.doi.org/10.5194/bg-12-4509-2015.
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Abstract. The purpose of this review is to address the reasons and methods for conducting optical remote sensing within the flux tower footprint. Fundamental principles and conclusions gleaned from over 2 decades of proximal remote sensing at flux tower sites are reviewed. The organizing framework used here is the light-use efficiency (LUE) model, both because it is widely used, and because it provides a useful theoretical construct for integrating optical remote sensing with flux measurements. Multiple ways of driving this model, ranging from meteorological measurements to remote sensing, have emerged in recent years, making it a convenient conceptual framework for comparative experimental studies. New interpretations of established optical sampling methods, including the photochemical reflectance index (PRI) and solar-induced chlorophyll fluorescence (SIF), are discussed within the context of the LUE model. Multi-scale analysis across temporal and spatial axes is a central theme because such scaling can provide links between ecophysiological mechanisms detectable at the level of individual organisms and broad patterns emerging at larger scales, enabling evaluation of emergent properties and extrapolation to the flux footprint and beyond. Proper analysis of the sampling scale requires an awareness of sampling context that is often essential to the proper interpretation of optical signals. Additionally, the concept of optical types, vegetation exhibiting contrasting optical behavior in time and space, is explored as a way to frame our understanding of the controls on surface–atmosphere fluxes. Complementary normalized difference vegetation index (NDVI) and PRI patterns across ecosystems are offered as an example of this hypothesis, with the LUE model and light-response curve providing an integrating framework. I conclude that experimental approaches allowing systematic exploration of plant optical behavior in the context of the flux tower network provides a unique way to improve our understanding of environmental constraints and ecophysiological function. In addition to an enhanced mechanistic understanding of ecosystem processes, this integration of remote sensing with flux measurements offers many rich opportunities for upscaling, satellite validation, and informing practical management objectives ranging from assessing ecosystem health and productivity to quantifying biospheric carbon sequestration.
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Gamon, J. A. "Optical sampling of the flux tower footprint." Biogeosciences Discussions 12, no. 6 (March 30, 2015): 4973–5014. http://dx.doi.org/10.5194/bgd-12-4973-2015.
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Abstract. The purpose of this review is to address the reasons and methods for conducting optical remote sensing within the flux tower footprint. Fundamental principles and conclusions gleaned from over two decades of proximal remote sensing at flux tower sites are reviewed. An organizing framework is the light-use efficiency (LUE) model, both because it is widely used, and because it provides a useful theoretical construct for integrating optical remote sensing with flux measurements. Multiple ways of driving this model, ranging from meteorological measurements to remote sensing, have emerged in recent years, making it a convenient conceptual framework for comparative experimental studies. New interpretations of established optical sampling methods, including the Photochemical Reflectance Index (PRI) and Solar-Induced Fluorescence (SIF), are discussed within the context of the LUE model. Multi-scale analysis across temporal and spatial axes is a central theme, because such scaling can provide links between ecophysiological mechanisms detectable at the level of individual organisms and broad patterns emerging at larger scales, enabling evaluation of emergent properties and extrapolation to the flux footprint and beyond. Proper analysis of sampling scale requires an awareness of sampling context that is often essential to the proper interpretation of optical signals. Additionally, the concept of optical types, vegetation exhibiting contrasting optical behavior in time and space, is explored as a way to frame our understanding of the controls on surface–atmosphere fluxes. Complementary NDVI and PRI patterns across ecosystems are offered as an example of this hypothesis, with the LUE model and light-response curve providing an integrating framework. We conclude that experimental approaches allowing systematic exploration of plant optical behavior in the context of the flux tower network provides a unique way to improve our understanding of environmental constraints and ecophysiological function. In addition to an enhanced mechanistic understanding of ecosystem processes, this integration of remote sensing with flux measurements offers many rich opportunities for upscaling, satellite validation, and informing practical management objectives ranging form assessing ecosystem health and productivity to quantifying biospheric carbon sequestration.
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Dhillon, Maninder Singh, Thorsten Dahms, Carina Kuebert-Flock, Erik Borg, Christopher Conrad, and Tobias Ullmann. "Modelling Crop Biomass from Synthetic Remote Sensing Time Series: Example for the DEMMIN Test Site, Germany." Remote Sensing 12, no. 11 (June 4, 2020): 1819. http://dx.doi.org/10.3390/rs12111819.
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This study compares the performance of the five widely used crop growth models (CGMs): World Food Studies (WOFOST), Coalition for Environmentally Responsible Economies (CERES)-Wheat, AquaCrop, cropping systems simulation model (CropSyst), and the semi-empiric light use efficiency approach (LUE) for the prediction of winter wheat biomass on the Durable Environmental Multidisciplinary Monitoring Information Network (DEMMIN) test site, Germany. The study focuses on the use of remote sensing (RS) data, acquired in 2015, in CGMs, as they offer spatial information on the actual conditions of the vegetation. Along with this, the study investigates the data fusion of Landsat (30 m) and Moderate Resolution Imaging Spectroradiometer (MODIS) (500 m) data using the spatial and temporal reflectance adaptive reflectance fusion model (STARFM) fusion algorithm. These synthetic RS data offer a 30-m spatial and one-day temporal resolution. The dataset therefore provides the necessary information to run CGMs and it is possible to examine the fine-scale spatial and temporal changes in crop phenology for specific fields, or sub sections of them, and to monitor crop growth daily, considering the impact of daily climate variability. The analysis includes a detailed comparison of the simulated and measured crop biomass. The modelled crop biomass using synthetic RS data is compared to the model outputs using the original MODIS time series as well. On comparison with the MODIS product, the study finds the performance of CGMs more reliable, precise, and significant with synthetic time series. Using synthetic RS data, the models AquaCrop and LUE, in contrast to other models, simulate the winter wheat biomass best, with an output of high R2 (>0.82), low RMSE (<600 g/m2) and significant p-value (<0.05) during the study period. However, inputting MODIS data makes the models underperform, with low R2 (<0.68) and high RMSE (>600 g/m2). The study shows that the models requiring fewer input parameters (AquaCrop and LUE) to simulate crop biomass are highly applicable and precise. At the same time, they are easier to implement than models, which need more input parameters (WOFOST and CERES-Wheat).
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Lin, Shangrong, Xiaojuan Huang, Yi Zheng, Xiao Zhang, and Wenping Yuan. "An Open Data Approach for Estimating Vegetation Gross Primary Production at Fine Spatial Resolution." Remote Sensing 14, no. 11 (June 1, 2022): 2651. http://dx.doi.org/10.3390/rs14112651.
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Accurate simulations of the spatial and temporal changes in vegetation gross primary production (GPP) play an important role in ecological studies. Previous studies highlighted large uncertainties in GPP datasets based on satellite data with coarse spatial resolutions (>500 m), and implied the need to produce high-spatial-resolution datasets. However, estimating fine spatial resolution GPP is time-consuming and requires an enormous amount of computing storage space. In this study, based on the Eddy Covariance-Light Use Efficiency (EC-LUE) model, we used Google Earth Engine (GEE) to develop a web application (EC-LUE APP) to generate 30-m-spatial-resolution GPP estimates within a region of interest. We examined the accuracy of the GPP estimates produced by the APP and compared them with observed GPP at 193 global eddy covariance sites. The results showed the good performance of the EC-LUE APP in reproducing the spatial and temporal variations in the GPP. The fine-spatial-resolution GPP product (GPPL) explained 64% of the GPP variations and had fewer uncertainties (root mean square error = 2.34 g C m−2 d−1) and bias (−0.09 g C m−2 d−1) than the coarse-spatial-resolution GPP products. In particular, the GPPL significantly improved the GPP estimations for cropland and dryland ecosystems. With this APP, users can easily obtain 30-m-spatial-resolution GPP at any given location and for any given year since 1984.
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Zhou, Xuqiang, Xufeng Wang, Songlin Zhang, Yang Zhang, and Xuejie Bai. "Combining Phenological Camera Photos and MODIS Reflectance Data to Predict GPP Daily Dynamics for Alpine Meadows on the Tibetan Plateau." Remote Sensing 12, no. 22 (November 13, 2020): 3735. http://dx.doi.org/10.3390/rs12223735.
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Gross primary production (GPP) is the overall photosynthetic fixation of carbon per unit space and time. Due to uncertainties resulting from clouds, snow, aerosol, and topography, it is a challenging task to accurately estimate daily GPP. Daily digital photos from a phenological camera record vegetation daily greenness dynamics with little cloud or aerosol disturbance. It can be fused with satellite remote sensing data to improve daily GPP prediction accuracy. In this study, we combine the two types of datasets to improve the estimation accuracy of GPP for alpine meadow on the Tibetan Plateau. To examine the performance of different methods and vegetation indices (VIs), three experiments were designed. First, GPP was estimated with the light use efficiency (LUE) model with the green chromatic coordinate (GCC) from the phenological camera and vegetation index from MODIS, respectively. Second, GPP was estimated with the Backpropagation neural network machine learning algorithm (BNNA) method with GCC from the phenological camera and vegetation index from MODIS, respectively. Finally, GPP was estimated with the BNNA method using GCC and vegetation index as inputs at the same time. Compared with eddy covariance GPP, GPP predicted by the BNNA method with GCC and vegetation indices as inputs at the same time showed the highest accuracy of all the experiments. The results indicated that GCC had a higher accuracy than NDVI and EVI when only one vegetation index data was used in the LUE model or the BNNA method. The R2 of GPP estimated by BNNA and GPP from eddy covariance increased by 0.12 on average, RMSE decreased by 1.13 g C·m−2·day−1 on average, and MAD decreased by 0.87 g C·m−2·day−1 on average compared with GPP estimated by the traditional LUE model and GPP from eddy covariance. This study puts forth a new way to improve the estimation accuracy of GPP on the Tibetan Plateau. With the emergence of a large number of phenological cameras, this method has great potential for use on the Tibetan Plateau, which is heavily affected by clouds and snow.
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Fu, Yangyang, Jianxi Huang, Yanjun Shen, Shaomin Liu, Yong Huang, Jie Dong, Wei Han, Tao Ye, Wenzhi Zhao, and Wenping Yuan. "A Satellite-Based Method for National Winter Wheat Yield Estimating in China." Remote Sensing 13, no. 22 (November 19, 2021): 4680. http://dx.doi.org/10.3390/rs13224680.
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Satellite-based models have tremendous potential for monitoring crop production because satellite data can provide temporally and spatially continuous crop growth information at large scale. This study used a satellite-based vegetation production model (i.e., eddy covariance light use efficiency, EC-LUE) to estimate national winter wheat gross primary production, and then combined this model with the harvest index (ratio of aboveground biomass to yield) to convert the estimated winter wheat production to yield. Specifically, considering the spatial differences of the harvest index, we used a cross-validation method to invert the harvest index of winter wheat among counties, municipalities and provinces. Using the field-surveyed and statistical yield data, we evaluated the model performance, and found the model could explain more than 50% of the spatial variations of the yield both in field-surveyed regions and most administrative units. Overall, the mean absolute percentage errors of the yield are less than 20% in most counties, municipalities and provinces, and the mean absolute percentage errors for the production of winter wheat at the national scale is 4.06%. This study demonstrates that a satellite-based model is an alternative method for crop yield estimation on a larger scale.
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Chen, T., G. R. van der Werf, N. Gobron, E. J. Moors, and A. J. Dolman. "Global cropland monthly gross primary production in the year 2000." Biogeosciences 11, no. 14 (July 24, 2014): 3871–80. http://dx.doi.org/10.5194/bg-11-3871-2014.
Full textAbstract:
Abstract. Croplands cover about 12% of the ice-free terrestrial land surface. Compared with natural ecosystems, croplands have distinct characteristics due to anthropogenic influences. Their global gross primary production (GPP) is not well constrained and estimates vary between 8.2 and 14.2 Pg C yr−1. We quantified global cropland GPP using a light use efficiency (LUE) model, employing satellite observations and survey data of crop types and distribution. A novel step in our analysis was to assign a maximum light use efficiency estimate (&varepsilon;*GPP) to each of the 26 different crop types, instead of taking a uniform value as done in the past. These &varepsilon;*GPP values were calculated based on flux tower CO2 exchange measurements and a literature survey of field studies, and ranged from 1.20 to 2.96 g C MJ−1. Global cropland GPP was estimated to be 11.05 Pg C yr−1 in the year 2000. Maize contributed most to this (1.55 Pg C yr−1), and the continent of Asia contributed most with 38.9% of global cropland GPP. In the continental United States, annual cropland GPP (1.28 Pg C yr−1) was close to values reported previously (1.24 Pg C yr−1) constrained by harvest records, but our estimates of &varepsilon;*GPP values were considerably higher. Our results are sensitive to satellite information and survey data on crop type and extent, but provide a consistent and data-driven approach to generate a look-up table of &varepsilon;*GPP for the 26 crop types for potential use in other vegetation models.