Dissertations / Theses on the topic 'Inferenza causale'
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HAMMAD, AHMED TAREK. "Tecniche di valutazione degli effetti dei Programmi e delle Politiche Pubbliche. L' approccio di apprendimento automatico causale." Doctoral thesis, Università Cattolica del Sacro Cuore, 2022. http://hdl.handle.net/10280/110705.
Full textThe analysis of causal mechanisms has been considered in various disciplines such as sociology, epidemiology, political science, psychology and economics. These approaches allow uncovering causal relations and mechanisms by studying the role of a treatment variable (such as a policy or a program) on a set of outcomes of interest or different intermediates variables on the causal path between the treatment and the outcome variables. This thesis first focuses on reviewing and exploring alternative strategies to investigate causal effects and multiple mediation effects using Machine Learning algorithms which have been shown to be particularly suited for assessing research questions in complex settings with non-linear relations. Second, the thesis provides two empirical examples where two Machine Learning algorithms, namely the Generalized Random Forest and Multiple Additive Regression Trees, are used to account for important control variables in causal inference in a data-driven way. By bridging a fundamental gap between causality and advanced data modelling, this work combines state of the art theories and modelling techniques.
ROMIO, SILVANA ANTONIETTA. "Modelli marginali strutturali per lo studio dell'effetto causale di fattori di rischio in presenza di confondenti tempo dipendenti." Doctoral thesis, Università degli Studi di Milano-Bicocca, 2010. http://hdl.handle.net/10281/8048.
Full textNguyên, Tri Long. "Inférence causale, modélisation prédictive et décision médicale." Thesis, Montpellier, 2016. http://www.theses.fr/2016MONTT028.
Full textMedical decision-making is defined by the choice of treatment of illness, which attempts to maximize the healthcare benefit, given a probable outcome. The choice of a treatment must be therefore based on a scientific evidence. It refers to a problem of estimating the treatment effect. In a first part, we present, discuss and propose causal inference methods for estimating the treatment effect using experimental or observational designs. However, the evidences provided by these approaches are established at the population level, not at the individual level. Foreknowing the patient’s probability of outcome is essential for adapting a clinical decision. In a second part, we present the approach of predictive modeling, which provided a leap forward in personalized medicine. Predictive models give the patient’s prognosis at baseline and then let the clinician decide on treatment. This approach is therefore limited, as the choice of treatment is still based on evidences stated at the overall population level. In a third part, we propose an original method for estimating the individual treatment effect, by combining causal inference and predictive modeling. Whether a treatment is foreseen, our approach allows the clinician to foreknow and compare both the patient’s prognosis without treatment and the patient’s prognosis with treatment. Within this thesis, we present a series of eight articles
Sun, Xiaohai. "Causal inference from statistical data /." Berlin : Logos-Verl, 2008. http://d-nb.info/988947331/04.
Full textLIU, DAYANG. "A Review of Causal Inference." Digital WPI, 2009. https://digitalcommons.wpi.edu/etd-theses/44.
Full textSauley, Beau. "Three Essays in Causal Inference." University of Cincinnati / OhioLINK, 2021. http://rave.ohiolink.edu/etdc/view?acc_num=ucin1627659095905957.
Full textLiu, Dayang. "A review of causal inference." Worcester, Mass. : Worcester Polytechnic Institute, 2009. http://www.wpi.edu/Pubs/ETD/Available/etd-010909-121301/.
Full textMahmood, Sharif. "Finding common support and assessing matching methods for causal inference." Diss., Kansas State University, 2017. http://hdl.handle.net/2097/36190.
Full textDepartment of Statistics
Michael J. Higgins
This dissertation presents an approach to assess and validate causal inference tools to es- timate the causal effect of a treatment. Finding treatment effects in observational studies is complicated by the need to control for confounders. Common approaches for controlling include using prognostically important covariates to form groups of similar units containing both treatment and control units or modeling responses through interpolation. This disser- tation proposes a series of new, computationally efficient methods to improve the analysis of observational studies. Treatment effects are only reliably estimated for a subpopulation under which a common support assumption holds—one in which treatment and control covariate spaces overlap. Given a distance metric measuring dissimilarity between units, a graph theory is used to find common support. An adjacency graph is constructed where edges are drawn between similar treated and control units to determine regions of common support by finding the largest connected components (LCC) of this graph. The results show that LCC improves on existing methods by efficiently constructing regions that preserve clustering in the data while ensuring interpretability of the region through the distance metric. This approach is extended to propose a new matching method called largest caliper matching (LCM). LCM is a version of cardinality matching—a type of matching used to maximize the number of units in an observational study under a covariate balance constraint between treatment groups. While traditional cardinality matching is an NP-hard, LCM can be completed in polynomial time. The performance of LCM with other five popular matching methods are shown through a series of Monte Carlo simulations. The performance of the simulations is measured by the bias, empirical standard deviation and the mean square error of the estimates under different treatment prevalence and different distributions of covariates. The formed matched samples improve estimation of the population treatment effect in a wide range of settings, and suggest cases in which certain matching algorithms perform better than others. Finally, this dissertation presents an application of LCC and matching methods on a study of the effectiveness of right heart catheterization (RHC) and find that clinical outcomes are significantly worse for patients that undergo RHC.
Guo, H. "Statistical causal inference and propensity analysis." Thesis, University of Cambridge, 2011. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.599787.
Full textFancsali, Stephen E. "Constructing Variables That Support Causal Inference." Research Showcase @ CMU, 2013. http://repository.cmu.edu/dissertations/398.
Full textMorrissey, Edward R. "Bayesian inference of causal gene networks." Thesis, University of Warwick, 2012. http://wrap.warwick.ac.uk/45732/.
Full textLu, Jiannan. "On Causal Inference for Ordinal Outcomes." Thesis, Harvard University, 2015. http://nrs.harvard.edu/urn-3:HUL.InstRepos:23845443.
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Murray, Eleanor Jane. "Agent-Based Models for Causal Inference." Thesis, Harvard University, 2016. http://nrs.harvard.edu/urn-3:HUL.InstRepos:27201721.
Full textShpitser, Ilya. "Complete identification methods for causal inference." Diss., Restricted to subscribing institutions, 2008. http://proquest.umi.com/pqdweb?did=1708387761&sid=1&Fmt=2&clientId=1564&RQT=309&VName=PQD.
Full textLam, Patrick Kenneth. "Estimating Individual Causal Effects." Thesis, Harvard University, 2013. http://dissertations.umi.com/gsas.harvard:11150.
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Amjad, Muhammad Jehangir. "Sequential data inference via matrix estimation : causal inference, cricket and retail." Thesis, Massachusetts Institute of Technology, 2018. http://hdl.handle.net/1721.1/120190.
Full textThis electronic version was submitted by the student author. The certified thesis is available in the Institute Archives and Special Collections.
Cataloged from student-submitted PDF version of thesis.
Includes bibliographical references (pages 185-193).
This thesis proposes a unified framework to capture the temporal and longitudinal variation across multiple instances of sequential data. Examples of such data include sales of a product over a period of time across several retail locations; trajectories of scores across cricket games; and annual tobacco consumption across the United States over a period of decades. A key component of our work is the latent variable model (LVM) which views the sequential data as a matrix where the rows correspond to multiple sequences while the columns represent the sequential aspect. The goal is to utilize information in the data within the sequence and across different sequences to address two inferential questions: (a) imputation or "filling missing values" and "de-noising" observed values, and (b) forecasting or predicting "future" values, for a given sequence of data. Using this framework, we build upon the recent developments in "matrix estimation" to address the inferential goals in three different applications. First, a robust variant of the popular "synthetic control" method used in observational studies to draw causal statistical inferences. Second, a score trajectory forecasting algorithm for the game of cricket using historical data. This leads to an unbiased target resetting algorithm for shortened cricket games which is an improvement upon the biased incumbent approach (Duckworth-Lewis-Stern). Third, an algorithm which leads to a consistent estimator for the time- and location-varying demand of products using censored observations in the context of retail. As a final contribution, the algorithms presented are implemented and packaged as a scalable open-source library for the imputation and forecasting of sequential data with applications beyond those presented in this work.
by Muhammad Jehangir Amjad.
Ph. D.
Lin, Winston. "Essays on Causal Inference in Randomized Experiments." Thesis, University of California, Berkeley, 2013. http://pqdtopen.proquest.com/#viewpdf?dispub=3593906.
Full textThis dissertation explores methodological topics in the analysis of randomized experiments, with a focus on weakening the assumptions of conventional models.
Chapter 1 gives an overview of the dissertation, emphasizing connections with other areas of statistics (such as survey sampling) and other fields (such as econometrics and psychometrics).
Chapter 2 reexamines Freedman's critique of ordinary least squares regression adjustment in randomized experiments. Using Neyman's model for randomization inference, Freedman argued that adjustment can lead to worsened asymptotic precision, invalid measures of precision, and small-sample bias. This chapter shows that in sufficiently large samples, those problems are minor or easily fixed. OLS adjustment cannot hurt asymptotic precision when a full set of treatment-covariate interactions is included. Asymptotically valid confidence intervals can be constructed with the Huber-White sandwich standard error estimator. Checks on the asymptotic approximations are illustrated with data from a randomized evaluation of strategies to improve college students' achievement. The strongest reasons to support Freedman's preference for unadjusted estimates are transparency and the dangers of specification search.
Chapter 3 extends the discussion and analysis of the small-sample bias of OLS adjustment. The leading term in the bias of adjustment for multiple covariates is derived and can be estimated empirically, as was done in Chapter 2 for the single-covariate case. Possible implications for choosing a regression specification are discussed.
Chapter 4 explores and modifies an approach suggested by Rosenbaum for analysis of treatment effects when the outcome is censored by death. The chapter is motivated by a randomized trial that studied the effects of an intensive care unit staffing intervention on length of stay in the ICU. The proposed approach estimates effects on the distribution of a composite outcome measure based on ICU mortality and survivors' length of stay, addressing concerns about selection bias by comparing the entire treatment group with the entire control group. Strengths and weaknesses of possible primary significance tests (including the Wilcoxon-Mann-Whitney rank sum test and a heteroskedasticity-robust variant due to Brunner and Munzel) are discussed and illustrated.
Zajonc, Tristan. "Essays on Causal Inference for Public Policy." Thesis, Harvard University, 2012. http://dissertations.umi.com/gsas.harvard:10163.
Full textBrendel, Markus. "Essays on causal inference in corporate finance." Doctoral thesis, Saechsische Landesbibliothek- Staats- und Universitaetsbibliothek Dresden, 2015. http://nbn-resolving.de/urn:nbn:de:bsz:14-qucosa-180823.
Full textBudhathoki, Kailash [Verfasser]. "Causal inference on discrete data / Kailash Budhathoki." Saarbrücken : Saarländische Universitäts- und Landesbibliothek, 2020. http://d-nb.info/1226153801/34.
Full textFeller, Avi Isaac. "Essays in Causal Inference and Public Policy." Thesis, Harvard University, 2015. http://nrs.harvard.edu/urn-3:HUL.InstRepos:17467344.
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Garcia, Horton Viviana. "Topics in Bayesian Inference for Causal Effects." Thesis, Harvard University, 2015. http://nrs.harvard.edu/urn-3:HUL.InstRepos:23845483.
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Bailey, Delia Ruth Grigg Katz Jonathan N. "Essays on causal inference and political representation /." Diss., Pasadena, Calif. : California Institute of Technology, 2007. http://resolver.caltech.edu/CaltechETD:etd-05242007-154102.
Full textGarcía, Núñez Luis. "Econometría de evaluación de impacto." Economía, 2012. http://repositorio.pucp.edu.pe/index/handle/123456789/117180.
Full textEn años recientes los métodos de evaluación de impacto se han difundido ampliamente en la investigaciónmicroeconómica aplicada. Sin embargo, la variedad de métodos responde a problemas particulares y específicos los cuales están determinados normalmente por los datos disponibles y el impacto que se busca medir. El presente documento resume las principales corrientes disponibles en la literatura actual, poniendo énfasis en los supuestos bajo los cuales el efecto tratamiento promedio y el efecto tratamiento promedio sobre los tratados se encuentran identificados. Adicionalmente se presentan algunos ejemplos de aplicaciones prácticas de estos métodos. Se busca hacer una presentación didáctica que pueda ser útil a estudiantes avanzados y a investigadores aplicados que busquen conocer los principios básicos de estas técnicas.
Andric, Nikola. "Exploring Objective Causal Inference in Case-Noncase Studies under the Rubin Causal Model." Thesis, Harvard University, 2015. http://nrs.harvard.edu/urn-3:HUL.InstRepos:17467481.
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Echtermeyer, Christoph. "Causal pattern inference from neural spike train data." Thesis, St Andrews, 2009. http://hdl.handle.net/10023/843.
Full textLundin, Mathias. "Sensitivity Analysis of Untestable Assumptions in Causal Inference." Doctoral thesis, Umeå universitet, Statistiska institutionen, 2011. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-43239.
Full textRamsahai, Roland Ryan. "Causal inference with instruments and other supplementary variables." Thesis, University of Oxford, 2008. http://ora.ox.ac.uk/objects/uuid:df2961da-0843-421f-8be4-66a92e6b0d13.
Full textGong, Zhaojing. "Parametric Potential-Outcome Survival Models for Causal Inference." Thesis, University of Canterbury. Mathematics and Statistics, 2008. http://hdl.handle.net/10092/1803.
Full textArcangeloni, Luca. "Causal Inference for Jamming Detection in Adverse Scenarios." Master's thesis, Alma Mater Studiorum - Università di Bologna, 2021.
Find full textLu, Danni. "Representation Learning Based Causal Inference in Observational Studies." Diss., Virginia Tech, 2021. http://hdl.handle.net/10919/102426.
Full textDoctor of Philosophy
Reasoning cause and effect is the innate ability of a human. While the drive to understand cause and effect is instinct, the rigorous reasoning process is usually trained through the observation of countless trials and failures. In this dissertation, we embark on a journey to explore various principles and novel statistical approaches for causal inference in observational studies. Throughout the dissertation, we focus on the causal effect estimation which answers questions like ``what if" and ``what could have happened". The causal effect of a treatment is measured by comparing the outcomes corresponding to different treatment levels of the same unit, e.g. ``what if the unit is treated instead of not treated?". The challenge lies in the fact that i) a unit only receives one treatment at a time and therefore it is impossible to directly compare outcomes of different treatment levels; ii) comparing the outcomes across different units may involve bias due to confounding as the treatment assignment potentially follows a systematic mechanism. Therefore, deconfounding constructs the main hurdle in estimating causal effects. This dissertation presents two parallel principles of deconfounding: i) balancing, i.e., comparing difference under similar conditions; ii) contrasting, i.e., extracting invariance under heterogeneous conditions. Chapter 2 and Chapter 3 explore causal effect through balancing, with the former systematically reviews a classical propensity score weighting approach in a conventional data setting and the latter presents a novel generative Bayesian framework named Balancing Variational Neural Inference of Causal Effects(BV-NICE) for high-dimensional, complex, and noisy observational data. It incorporates the advance deep learning techniques of representation learning, adversarial learning, and variational inference. The robustness and effectiveness of the proposed framework are demonstrated through an extensive set of experiments. Chapter 4 extracts causal effect through contrasting, emphasizing that ascertaining stability is the key of causality. A novel causal effect estimating procedure called Risk Invariant Causal Estimation(RICE) is proposed that leverages the observed data disparities to enable the identification of stable causal effects. The improved generalizability of RICE is demonstrated through synthetic data with different structures, compared with state-of-art models. In summary, this dissertation presents a flexible causal inference framework that acknowledges the data uncertainties and heterogeneities. By promoting two different aspects of causal principles and integrating advance deep learning techniques, the proposed framework shows improved balance for complex covariate interactions, enhanced robustness for unobservable latent confounders, and better generalizability for novel populations.
Kovach, Matthew. "Causal Inference of Human Resources Key Performance Indicators." Bowling Green State University / OhioLINK, 2018. http://rave.ohiolink.edu/etdc/view?acc_num=bgsu1542361652897175.
Full textLee, Joseph Jiazong. "Extensions of Randomization-Based Methods for Causal Inference." Thesis, Harvard University, 2015. http://nrs.harvard.edu/urn-3:HUL.InstRepos:17463974.
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Ding, Peng. "Exploring the Role of Randomization in Causal Inference." Thesis, Harvard University, 2015. http://nrs.harvard.edu/urn-3:HUL.InstRepos:17467349.
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Burauel, Patrick [Verfasser]. "Essays on Methods for Causal Inference / Patrick Burauel." Berlin : Freie Universität Berlin, 2020. http://d-nb.info/1218077816/34.
Full textMOSCELLI, GIUSEPPE. "Essays on causal inference and applied health economics." Doctoral thesis, Università degli Studi di Roma "Tor Vergata", 2013. http://hdl.handle.net/2108/207907.
Full textHajage, David. "Utilisation du score de propension et du score pronostique en pharmacoépidémiologie." Thesis, Sorbonne Paris Cité, 2017. http://www.theses.fr/2017USPCC175/document.
Full textPharmacoepidemiologic observational studies are often conducted to evaluate newly marketed drugs or drugs in competition with many alternatives. In such cohort studies, the exposure of interest is rare. To take into account confounding factors in such settings, some authors advise against the use of the propensity score in favor of the prognostic score, but this recommendation is not supported by any study especially focused on infrequent exposures and ignores the type of estimation provided by each prognostic score-based method.The first part of this work evaluates the use of propensity score-based methods to estimate the marginal effect of a rare exposure. The second part evaluates the performance of the prognostic score based methods already reported in the literature, compares them with the propensity score based methods, and introduces some new prognostic score-based methods intended to estimate conditional or marginal effects. The last part deals with variance estimators of the treatment effect. We present the opposite consequences of ignoring the estimation step of the propensity score and the prognostic score. We show some new variance estimators accounting for this step
Hamada, Sophie Rym. "Analyse de la prise en charge des patients traumatisés sévères dans le contexte français : processus de triage et processus de soin." Thesis, Université Paris-Saclay (ComUE), 2019. http://www.theses.fr/2019SACLS572.
Full textIn France, the third most frequent cause of disability adjusted life years lost is trauma, an observation that makes trauma a public health challenge. However, investment in trauma care and specific research fails to meet this challenge and to acknowledge the associated societal and economic impact.The purpose of this research was to explore the core of the pathway of a major trauma patient and bring to light key issues and question and to find answers. The data used in this research were mainly extracted from a regional and national trauma registry, the Traumabase®. The registry collects epidemiological, clinical, paraclinical and therapeutic variables for patients with severe trauma admitted to participating trauma centres. The first project focused on the effects of triage on patients with severe trauma following a road traffic accident in the Ile de France region. Patients who were initially under triaged and then transferred to regional trauma centres did not have a worse prognosis than patients who were transported directly. The emergency medical system as a whole ensured that they would have an equivalent outcome. A population analysis carried out by a probabilistic data chainage using the accident records of the National Road Safety Observatory made it possible to approach the undertriage rate leading to death in the region (0.15%) and to reveal that 60% of deaths occurred before any hospital admission. The second project developed a pragmatic pre-alert tool based on simple, clinical prehospital criteria to predict acute hemorrhage in trauma patients. This tool is meant to increase the performance of the receiving hospital trauma team of these critically sick patients and activate a specific hemorrhage pathway. The study identified five variables (shock index>1, mean blood pressure <70mmHg, capillary hemoglobin <13g/dL, unstable pelvis and intubation). If two or more variables were present, the tool identified patient with acute hemorrhage and the corresponding pathway should be activated. This tool requires prospective validation and assessment of its impact on care provision and patient outcome.The third research project focused on a therapeutic component of trauma induced coagulopathy. The study attempted to quantify the effect of fibrinogen concentrate administration at the early phase of traumatic hemorrhagic shock (first 6 hours) on 24 hours all-cause mortality using a causal inference approach (propensity score and double robust estimator). The research did not demonstrate any impact on mortality (observed risk difference: -0.031, 95% confidence interval [-0.084; 0.021]); a lack of power might be responsible for this result
Häggström, Jenny. "Selection of smoothing parameters with application in causal inference." Doctoral thesis, Umeå universitet, Statistiska institutionen, 2011. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-39614.
Full textWaernbaum, Ingeborg. "Covariate selection and propensity score specification in causal inference." Doctoral thesis, Umeå : Umeå universitet, 2008. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-1688.
Full textOelrich, Oscar. "Causal Inference Using Propensity Score Matching in Clustered Data." Thesis, Uppsala universitet, Statistiska institutionen, 2014. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-225990.
Full textGeneletti, Sara Gisella. "Aspects of causal inference in a non-counterfactual framework." Thesis, University College London (University of London), 2005. http://discovery.ucl.ac.uk/1445505/.
Full textDing, Jiacheng. "Causal Inference based Fault Localization for Python Numerical Programs." Case Western Reserve University School of Graduate Studies / OhioLINK, 2018. http://rave.ohiolink.edu/etdc/view?acc_num=case1530904294580033.
Full textSun, BaoLuo. "Semi-Parametric Methods for Missing Data and Causal Inference." Thesis, Harvard University, 2016. http://nrs.harvard.edu/urn-3:HUL.InstRepos:33493594.
Full textBiostatistics
Liu, Jinzhong. "Bayesian Inference for Treatment Effect." University of Cincinnati / OhioLINK, 2017. http://rave.ohiolink.edu/etdc/view?acc_num=ucin1504803668961964.
Full textMajid, Asifa. "Language and causal understanding : there's something about Mary." Thesis, University of Glasgow, 2001. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.366213.
Full textBéal, Jonas. "De la modélisation mécanistique des voies de signalisation dans le cancer à l’interprétation des modèles et de leurs apports : applications cliniques et évaluation statistique." Electronic Thesis or Diss., Université Paris sciences et lettres, 2020. https://theses.hal.science/tel-03188676.
Full textBeyond its genetic mechanisms, cancer can be understood as a network disease that often results from the interactions between different perturbations in a cellular regulatory network. The dynamics of these networks and associated signaling pathways are complex and require integrated approaches. One approach is to design mechanistic models that translate the biological knowledge of networks in mathematical terms to simulate computationally the molecular features of cancers. However, these models only reflect the general mechanisms at work in cancers.This thesis proposes to define personalized mechanistic models of cancer. A generic model is first defined in a logical (or Boolean) formalism, before using omics data (mutations, RNA, proteins) from patients or cell lines in order to make the model specific to each one profile. These personalized models can then be compared with the clinical data of patients in order to validate them. The response to treatment is investigated in particular in this thesis. The explicit representation of the molecular mechanisms by these models allows to simulate the effect of different treatments according to their targets and to verify if the sensitivity of a patient to a drug is well predicted by the corresponding personalized model. An example concerning the response to BRAF inhibitors in melanomas and colorectal cancers is thus presented.The comparison of mechanistic models of cancer, those presented in this thesis and others, with clinical data also encourages a rigorous evaluation of their possible benefits in the context of medical use. The quantification and interpretation of the prognostic value of outputs of some mechanistic models is briefly presented before focusing on the particular case of models able to recommend the best treatment for each patient according to his molecular profile. A theoretical framework is defined to extend causal inference methods to the evaluation of such precision medicine algorithms. An illustration is provided using simulated data and patient derived xenografts.All the methods and applications put forward a possible path from the design of mechanistic models of cancer to their evaluation using statistical models emulating clinical trials. As such, this thesis provides one framework for the implementation of precision medicine in oncology
Elling, Eva. "Effects of MIFID II on Stock Trade Volumes of Nasdaq Stockholm." Thesis, KTH, Matematisk statistik, 2019. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-257510.
Full textImplementation av nya finansiella regelverk på finansmarknaden kräver aktsamhet för att uppnå de tilltänka målen. Det här arbetet undersöker huruvida MIFID II regleringen orsakade en temporär medelvärdesskiftning av de handlade aktievolymerna på Nasdaq Stockholm under regelverkets introduktion på den svenska marknaden. Först testas en generaliserad Negative Binomial regression applicerat på aggregerad data, därefter en individuell Fixed Effects modell för att försöka eliminera fel på grund av saknade, okända variabler. Det aggrigerade datasettet erhålls genom att ta genomsnittet av handelsvolymerna och justera dessa för sässongsmässiga mönster med metoden STL i kombination med regression med ARIMA residualer för att även ta hänsyn till kalender relaterade effekter. Eftersom den aggrigerade datan är robust lyckas the Negative Binomial regressionen fånga signifikanta effekter av regleringen för Small Cap. segmentet trots att datat uppvisar tecken på att subgrupper inom segmentet reagerat väldigt olika på den nya regleringen. Eftersom Fixed Effects modellen är applicerad på icke-aggrigerad TSCS data och pågrund av den varierande effekten på de individuella aktierna lyckas inte denna modell med detta.
Olsen, Catharina. "Causal inference and prior integration in bioinformatics using information theory." Doctoral thesis, Universite Libre de Bruxelles, 2013. http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/209401.
Full textAnother important problem in bioinformatics is the question of how the inferred networks’ quality can be evaluated. The current best practice is a two step procedure. In the first step, the highest scoring interactions are compared to known interactions stored in biological databases. The inferred networks passes this quality assessment if there is a large overlap with the known interactions. In this case, a second step is carried out in which unknown but high scoring and thus promising new interactions are validated ’by hand’ via laboratory experiments. Unfortunately when integrating prior knowledge in the inference procedure, this validation procedure would be biased by using the same information in both the inference and the validation. Therefore, it would no longer allow an independent validation of the resulting network.
The main contribution of this thesis is a complete computational framework that uses experimental knock down data in a cross-validation scheme to both infer and validate directed networks. Its components are i) a method that integrates genomic data and prior knowledge to infer directed networks, ii) its implementation in an R/Bioconductor package and iii) a web application to retrieve prior knowledge from PubMed abstracts and biological databases. To infer directed networks from genomic data and prior knowledge, we propose a two step procedure: First, we adapt the pairwise feature selection strategy mRMR to integrate prior knowledge in order to obtain the network’s skeleton. Then for the subsequent orientation phase of the algorithm, we extend a criterion based on interaction information to include prior knowledge. The implementation of this method is available both as part of the prior retrieval tool Predictive Networks and as a stand-alone R/Bioconductor package named predictionet.
Furthermore, we propose a fully data-driven quantitative validation of such directed networks using experimental knock-down data: We start by identifying the set of genes that was truly affected by the perturbation experiment. The rationale of our validation procedure is that these truly affected genes should also be part of the perturbed gene’s childhood in the inferred network. Consequently, we can compute a performance score
Doctorat en Sciences
info:eu-repo/semantics/nonPublished
Pingel, Ronnie. "Some Aspects of Propensity Score-based Estimators for Causal Inference." Doctoral thesis, Uppsala universitet, Statistiska institutionen, 2014. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-229341.
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