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1

Anissian, H. Lucas. "In vitro evaluation of hip prostheses /." Stockholm, 2001. http://diss.kib.ki.se/2001/20010420anis/.

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2

Ørskov, Christensen Janne. "Evaluation of an in vitro lipid digestion model : testing poorly soluble drug substances and lipid-based formulations /." [Cph.] : Department of Pharmaceutics, The Danish University of Pharmaceutical Sciences, 2004. http://www.dfh.dk/phd/defences/jannechristensen.htm.

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3

Poggialini, Federica. "Investigation of in vitro and in vivo pharmacokinetics and biological evaluation of pharmacologically active compounds." Doctoral thesis, Università di Siena, 2022. http://hdl.handle.net/11365/1202964.

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The first part of this thesis deals with the evaluation of in vitro and in vivo pharmacokinetics of novel broad-spectrum antiviral compounds active against enveloped viruses. The design and synthesis of new series of antiviral compounds with 1H-pyrrol-methylene thioxodihydropyrimidine structure, has been realized by Professor Maurizio Botta's research group, at the University of Siena. Compounds’ antiviral activity has been evaluated on several enveloped viruses, such as ZIKAV, DENV-2 and five influenza strains including the pandemic strain H7N9. The selectivity against enveloped viruses, time of addition and binding experiments confirmed their ability to intercalate in the viral envelope membrane, oxidize phospholipids and alter the fluidity of the lipid bilayer, compromising the efficacy of the virus-cell fusion step and preventing viral entry. With the aim of investigating the in vitro ADME properties, the most active compounds were selected to assay their chemical-physical properties and early select the most promising lead candidate. Thus, membrane permeability, binding to human serum albumin, and stability in human plasma and microsomes have been assayed. Finally, the lead candidate was selected to evaluate preliminary in vivo pharmacokinetic parameters; after formulation studies, the compound was administrated intravenously (iv) at the dose of 25 mg/kg and 12.5 mg/kg. The second chapter of this Ph.D. thesis concerns the investigation of the in vitro biological profile of nitric oxide-donor largazole prodrugs. Two hybrid analogues of largazole, as dual HDAC inhibitor and nitric oxide (NO) donors potentially useful as anticancer agents, have been designed and synthesized thanks to the collaboration between Professor Maurizio Botta’s research group and IRBM. Largazole is a natural product identified as the most potent and selective Class-I deacetylase (HDAC) inhibitor, that showed a broad-spectrum growth-inhibitory activity against epithelial and fibroblastic tumor cell lines and a low cytotoxicity profile. Over the last decades, dual nitric oxide (NO) donors/HDAC inhibitors have been developed as novel anticancer chemical entities, potentially more efficacious than selective HDAC inhibitors, owing to the capability of NO to specifically modulate the function of some HDAC isoforms and to overcome tumor cell resistance to conventional treatments. Thus, after the synthesis, the characterization of derivatives compounds and the in vitro NO release assay performed by Professor Maria Frosini using the Griess method, biological evaluation of their antiproliferative activities against U-2OS, Caco-2, and IMR-32 cell lines have been conducted. To further explain the additive antiproliferative effect of NO-donor compounds vs largazole, their stabilities both in human plasma and in cell culture medium were assessed. The third and last chapter of this Ph.D. thesis deals with the project I participated in during my exchange period at the research group of Professor Per Artursson, who hosted me for 5 months, at Uppsala University. In collaboration with AstraZeneca, a series of antisense oligonucleotide (ASO) conjugates, targeting MALAT1 chosen as a model target, were used to assess and validate their silencing efficiency and enhance/overcome endosomal escape. The MALAT1 silencing efficiencies of lipophilic ASO-conjugates and a peptide-ASO have been determined in the presence and absence of a cyclic cell permeation peptide (CPP) in two human embryonic kidney (HEK293) cell lines of which one overexpressing the target G-protein coupled receptor selected for the study. For this purpose, the expression levels of the MALAT1 gene mRNA were measured using qPCR in a time (0-24-48 hrs) and concentration (0.5-2.5-5 µM of ASOs and 5-10-15 µM of CPP)-dependent manner.
4

Machado, Michel Mansur. "Perfil fitoquímico e avaliação dos principais efeitos biológicos e imunológicos In Vitro da Euphorbia tirucalli L." Universidade Federal de Santa Maria, 2007. http://repositorio.ufsm.br/handle/1/5893.

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Today we can easily find the most diverse kind of information about a particular medicinal plant, but without scientific basis, making their use a potential risk to health. Overall, the findings on the safety and efficacy are based on precarious evaluations and popular use. There is a need for qualified professionals to access, critical analyze and assign such information in a way that it could be easily understood, not only by health professionals, but also by the users of these products. One example of these plants used in popular medicine, but without scientific evidence, is Euphorbia tirucalli L., popularly known as Dog-Stick, Pencil tree, or more commonly as Aveloz. This plant has been used for the treatment of many diseases, such as microbial diseases, immunossupression problems, and even in the cancer treatment. However, some works reveal precisely the opposite, namely that the latex of Euphorbia tirucalli can cause immunosuppression, and often is associated to the appearance of Burkitt's Lymphoma, a type of cancer. Lupeol was isolated and identificated from hexane fraction by GC-MS for the first time for the plant, among other 3 hydrocarbons, 7 long chain fat acids, 2 steroids, and 3 compounds of the vegetal metabolism. A preliminary phytochemistry screening allowed to the visualization of the principal groups in the plant. Polyphenols and condensed tannins contents were determined in the crude extract and fractions. Ethyl ether and ethyl acetate fractions showed the greatest antioxidant activity in the DPPH test. Antimicrobial activity was observed mainly against Candida albicans, Candida glabrata and Saccharomyces cereviseae, as well as for the opportunist algae Prototheca zopfii. A preliminary study of toxicity using Artemia saline and acute oral toxicity in mice, indicate the plant as low toxicity. The latex of the E. tirucalli, even in small doses (1%) can cause in vitro inhibition over the human Acetylcholinesterase enzyme. A prominent in vitro inhibitory activity over human platelets aggregation was also observed. The effects of the extract of the plant over the blood cells in a culture medium using ex-vivo blood samples of male Wistar rats were evaluated. The results demonstrated that the extract caused thrombocytopenia, leucopenia and lymphopenia.
Atualmente podemos encontrar facilmente as mais diversas informações sobre uma determinada planta medicinal, mas que carecem de fundamento científico, tornando assim seu uso um potencial risco a saúde. Em geral, as conclusões sobre segurança e eficácia são baseadas em avaliações precárias do uso popular. Portanto, há necessidade de que profissionais qualificados possam, além de acessar tais informações, analisá-las criticamente para disponibilizá-las de forma que sejam facilmente compreendidas, não só por profissionais da saúde, mas também pelos usuários destes produtos. Um exemplo destas plantas utilizadas na medicina popular, mas sem comprovação científica, é a Euphorbia tirucalli L., conhecida popularmente como Graveto-do-cão, Árvore Lápis, ou mais comumente como Aveloz. Esta planta tem sido utilizada para o tratamento de inúmeras enfermidades, como afecções microbianas, problemas de imunossupressão, cicatrização de berrugas e até mesmo no tratamento do câncer. Entretanto, alguns trabalhos revelam justamente o contrário, ou seja, que o látex da Euphorbia tirucalli pode causar imunossupressão, e freqüentemente encontra-se associado ao aparecimento do Linfoma de Burkitt, que é um tipo de câncer. Foram isolados e identificados por cromatografia gasosa acoplada a espectrometria de massas, 03 hidrocarbonetos, 07 ácidos graxos de cadeia longa, 02 esteróides, 03 compostos do metabolismo vegetal e 01 triterpeno, não relatado até o momento, o qual foi isolado da fração hexânica e identificado como sendo o lupeol. Foi realizada uma análise fitoquímica preliminar, o que permitiu a visualização dos grupos de compostos presentes na planta. A quantidade de polifenóis e taninos condensados foi determinada na planta e suas frações. Realizou-se o teste de atividade antioxidante e com ele verificamos uma excelente atividade das frações éter etílico e acetato de etila. Analisou-se a atividade antimicrobiana da planta e obtivemos resultados excelentes para os fungos Candida albicans, Candida glabrata e Saccharomyces cereviseae, bem como para a alga oportunista Prototheca zopfii. Realizou-se um estudo de toxicidade sobre a Artemia salina e estudo de toxicidade oral aguda. Os resultados apontam a espécie como sendo não tóxica. O látex da E. tirucalli, mesmo em doses pequenas (1%) pode causar inibição (in vitro) a enzima Acetilcolinesterase Humana. Uma acentuada atividade inibitória sobre a agregação plaquetária foi observada. O extrato da planta sobre cultura de células sanguíneas de ratos Wistar (exvivo) causou diminuição do número de leucocitos, linfócito e plaquetas.
5

Bwalya, A. G. "Evaluation of the in vitro biological activities and phytochemical profiling of eight Ficus species collected in Zambia." Thesis, University College London (University of London), 2015. http://discovery.ucl.ac.uk/1457111/.

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Infectious diseases are responsible for an overwhelming number of deaths and morbidity worldwide. In tropical regions of the world, in particular, developing countries like Zambia, poor health is prevalent and diseases such as malaria, meningitis, pneumonia, tuberculosis and gastrointestinal infections strongly persist. Folkloric medicines are still actively used against some of these infections as primary care before seeking conventional treatment at hospitals. Members of the genus Ficus (Moraceae) are traditionally used in Zambia against many diseases caused by bacterial, fungal and protozoal infections. Thus according to the plant parts used traditionally for herbal preparations, aerial and root parts of eight Ficus species namely; F. ingens, F. lutea, F. natalensis, F. ovata, F. sansibarica subsp. macrosperma, F. sycomorus subsp. gnaphalocarpa, F. sycomorus subsp. sycomorus and F. wakefieldii were collected from different parts of Zambia. The main aim of this thesis was to evaluate the medicinal potential of members of the genus Ficus. This was achieved by three objectives, which involved the phytochemical profiling of the crude extracts and subextracts of the Ficus for their constituents using chromatographic methods such as thin layer chromatography (TLC), proton Nuclear Magnetic Resonance (1H NMR) and high performance liquid chromatography (HPLC). Secondly, the extracts were screened for various biological activities after which they were evaluated against recombinant FAS-II elongation enzymes, FabG, FabI and FabZ as potential targets in liver stage malaria parasites. In this case, finely ground dried plant material was extracted with methanol (MeOH) to yield the crude methanol extracts (CR-MeOH) which, were further partitioned to provide a coarse separation of the crude extracts according to polarity. The three subextracts obtained included n-hexane, chloroform (CHCl3) and aqueous methanol (aq-MeOH). The obtained extracts and subextracts were screened for biological activities such as: antifungal and antibacterial activities using the broth dilution and agar disc diffusion assays, antitubercular activity using the MTT assay, antischistosomal activity using the microscopic in vitro assay. In addition, antiprotozoal activitites which included antileshmanial activity using an assay against amastigotes of L. donovani strain MHOM/ET/67/L82, trypanocidal activity against T. cruzi and T. brucei rhodesiense STIB 900 strain, and antiplasmodial activity by modified [3H]-hypoxanthine incorporation assay, using the chloroquine/pyrimethamine resistant K1 strain were performed. Cytotoxity activity was also performed using rat skeletal myoblasts L6-cells. The chemical profiling was done by TLC, NMR and RP-HPLC. Meanwhile the chemical compound isolation for F. sansibarica was attempted by different chromatographic techniques and characterization by spectroscopic methods. The phytochemical profiling revealed the presence of closely related polyphenolic compounds to which some of the biological activities were attributed to. For instance, the antibacterial and the FAS-II enzyme inhibition activities were mostly retained in the aq-MeOH subextracts, which were composed of very polar metabolites including flavonoids. Antiplasmodial activity was observed mostly in the less polar metabolites which were retained in the hexane and CHCl3 subextracts of the stem barks. This pattern was similar with antitrypanosomal and antileishmanial activities, though with lesser sensitivity. The same subextracts including those of the root barks showed the most activity against M. tuberculosis with MIC values of 256 and 128 μg/ml, and against Schistosoma, for both larval and adult worms. The extracts did not exert any antifungal activity by the agar disc diffusion method we used. Detailed phytochemical investigation of the leaves of F. sansibarica was performed, and led to the isolation of two compounds; epicatechin and apigenin-6-C-glucoside from the chloroform and aq. MeOH subextracts respectively. The predominant constituent of the CR-MeOH extract of F. sansibarica was identified as having a molecular weight of 432 g/mol by LC-MS analysis which could be set as an identification chemical marker for F. sansibarica. The results highlight the potential that Ficus species could have as a valuable source for potent compounds which can be identified as scaffolds for the development of novel liver stage antimalarial drugs. Our results support previous research on the antimicrobial activity of Ficus species and they also provide an in vitro scientific basis supporting the use of Ficus species in traditional herbal preparations against some bacterial and parasitic infections.
6

PRENCIPE, Filippo. "Synthesis and biological evaluation in vitro and in vivo of novel potent anticancer agents affecting tubulin polymerization." Doctoral thesis, Università degli studi di Ferrara, 2017. http://hdl.handle.net/11392/2487939.

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L’attività di ricerca svolta durante i tre anni di dottorato ha avuto come obiettivo la progettazione, la sintesi e l’ottimizzazione di nuovi potenziali agenti antitumorali dotati di attività antiproliferativa e antivascolare che hanno come target biologico i microtubuli, strutture dinamiche cellulari generate dalla polimerizzazione di eterodimeri di α,β tubulina. Il sistema di microtubuli è essenziale per la divisione cellulare, essendo coinvolto nella formazione del fuso mitotico, ed è importante per diversi processi cellulari quali la regolazione della motilità, segnalazione cellulare, secrezione e trasporto intracellulare. Tra le molecole di derivazione naturale, il cis-stilbene Combretastatina A-4 (CA-4), legando la tubulina a livello del sito di legame della colchicina, ne inibisce la polimerizzazione mostrando una potente attività antiproliferativa contro diverse linee cellulari tumorali. L’attività di ricerca relativa al primo anno di dottorato ha riguardato la sintesi di una nuova serie di composti a struttura 1-(3',4',5' trimetossibenzoil)-3-arilamino-5-amino-1,2,4-triazolica per i quali si è andati a valutare l’attività antiproliferativa in vitro, l’interazione con la tubulina e gli effetti prodotti sul ciclo cellulare. Per il derivato più attivo della serie, 1-(3,4,5-trimetossibenzoil)-3-(p-toluidino)-5-ammino-1,2,4-triazolo 3c è stata valutata l’attività antitumorale in vivo. I migliori risultati in termini di inibizione della proliferazione di linnee cellulari tumorali sono stati ottenuti con i derivati p-Me, m,p-diMe and p-Et fenil 3c, 3e e 3f, rispettivamente, i quali sono risultati essere equipotenti rispetto al composto di riferimento Combretastatina A-4 (CA-4). Proseguendo nel nostro lavoro di ricerca, nel corso del secondo anno di dottorato, una nuova serie di composti caratterizzati dalla presenza di un gruppo 2-metossi/etossicarbonile sono stati valutati per l’attività antiproliferativa su linee cellulari tumorali e per i composti più attivi della serie si è andati a valutare l’inibizione della polimerizzazione della tubulina, gli effetti sul ciclo cellulare e l’attività antitumorale in vivo. I migliori risultati in termini di attività antiproliferativa si sono ottenuti introducendo il sostituente metossilico in posizione C-6. Il composto più attivo della serie è risultato essere il derivato 2-metossicarbonil-3-(3’,4’,5’-trimetossianilino)-6-metossi-benzo[b]furano 3g, il quale ha prodotto una inibizione della proliferazione di linee cellulari tumorali a concentrazioni nanomolari (IC50’s, 0.3-27 nM), lega la tubulina a livello del sito di legame della colchicina, induce l’apoptosi e ha mostrato, sia in vitro che in vivo, una potente attività antivascolare su cellule endoteliali vascolari. Infine durante il terzo anno di dottorato è stata messa a punto la sintesi di una nuova serie di inibitori della polimerizzazione della tubulina a struttura 1- (3’,4’,5- trimetossiifenil) -2-aril-1H-imidazolica e progettati come cis-analoghi della combretastatina A-4, con l’obiettivo di valutare l’effetto sull’attività biologica prodotto dall’introduzione di diversi gruppi sostituenti a livello dell’anello fenilico in posizione C-2 dell’eterociclo imidazolico. L’introduzione di un atomo di cloro e di un gruppo etossilico nelle posizioni meta- e para-, rispettivamente, ha prodotto il composto più attivo della serie 1-(3’,4’ ,5’ -trimetossifenil)-2-(3’-Cl, 4’-OEt fenil)-1H-imidazolo 4o, con un valori di IC50 di 0.4-3.8 nM su un pannello di sette linee cellulari tumorali. Esperimenti condotti su un modello di topo singenico hanno dimostrato una potente attività antitumorale del composto 4o, il quale ha prodotto una significativa riduzione della massa tumorale a dosi trenta volte più basse rispetto a quelle richieste per la CA-4P usato come composto di riferimento.
During these three years of PhD our research work has been focused on the design, synthesis and optimization of novel potential anticancer agents with antivascular and antiproliferative activities which target microtubules, dynamic tubular proteins that are assembled from α tubulin/β tubulin (αβ-tubulin) heterodimers. The microtubule system is essential in a variety of fundamental cellular processes, including mitosis, formation and maintenance of cell shape, regulation of motility, cell signaling, secretion and intracellular transport. Among natural occurring compounds, Combretastatin A-4 (CA-4), a cis-stilbene isolated from the bark of the South African bush willow tree Combretum caffrum , is one of the most potent inhibitors of colchicine binding presently known. CA-4 has been shown to possess a powerful cytotoxic activity against a panel of tumor cell line, including multi-drug resistant cells. During the first year of PhD, a new class of compounds that incorporated the structural motif of the 1-(3’,4’,5’-trimethoxtbenzoyl)-3-arylamino-5-amino-1,2,4-triazole molecular skeleton was synthesized and evaluated for their in vitro antiproliferative activity, interactions with tubulin and cell cycle effects. The most active agent,( 1-(3,4,5-trimethoxybenzoyl)-3-(p-toluyl)-5-ammino-1,2,4-triazole, 3c), was evaluated for antitumor activity in vivo. The best results for inhibition of cancer cell growth were obtained with the p-Me, m,p-diMe and p-Et phenyl derivatives 3c, 3e and 3f, respectively, and, overall, these compounds were more or less as active as CA-4. Their vascular disrupting activity was evaluated in HUVEC cells, with compound 3c showing activity comparable with that of CA-4. Compound 3c almost eliminated the growth of syngeneic hepatocellular carcinoma in Balb/c mice, suggesting that 3c could be a new antimitotic agent with clinical potential. During the second year a new series of compounds characterized by the presence of a 2-methoxy/ethoxycarbonyl group were evaluated for antiproliferative activity against cancer cells in culture, and, for selected, highly active compounds, inhibition of tubulin polymerization, cell cycle effects and in vivo potency. The greatest antiproliferative activity occurred with a methoxy group introduced at the C-6 position, the least with this substituent at C-4. Thus far, the most promising compound in this series was 2-methoxycarbonyl-3-(3’,4’,5’-trimethoxyanilino)-6-methoxybenzo[b]furan (3g), which inhibited cancer cell growth at nanomolar concentrations (IC50’s, 0.3-27 nM), induced apoptosis and showed, both in vitro and in vivo, potent vascular disrupting properties derived from the effect of this compound on vascular endothelial cells. Compound 3g had in vivo antitumor activity in a murine model comparable to the activity obtained with combretastatin A-4 phosphate. The research work of the third year of PhD has been focused on the synthesis of a novel series of tubulin polymerization inhibitors, based on the 1-(3’,4’,5’-trimethoxyphenyl)-2-aryl-1H-imidazole scaffold, with the goal of evaluating the effects of various patterns of substitution on the phenyl at the 2-position of the imidazole ring on biological activity. A chloro and ethoxy group at the meta- and para-positions, respectively, produced the most active compound in the series (1-(3’,4’ ,5’ -trimethoxyfenyl)-2-(3’-Cl, 4’-Ethoxyfenyl)-1H-imidazole ,4o), with IC50 values of 0.4-3.8 nM against a panel of seven cancer cell lines. Except in HL-60 cells, 4o had greater antiproliferative than CA-4, indicating that the 3’-chloro-4’-ethoxyphenyl moiety was a good surrogate for the CA-4 B-ring. Experiments carried out in a mouse syngenic model demonstrated high antitumor activity of 4o, which significantly reduced the tumor mass at a dose thirty times lower than that required for CA-4P, which was used as a reference compound.
7

Galgano, Camillo. "Evaluation des propriétés biologiques et de scellement de 4 matériaux endodontiques = [In vitro evaluation of the biological and sealing properties of four endodontic sealers] /." Genève : [s.n.], 2005. http://www.unige.ch/cyberdocuments/theses2005/GalganoC/these.pdf.

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8

Hollywood, Jane Constance. "Biological control of late blight of potatoes : in vivo and in vitro evaluation of microbial antagonists against tuber blight." Thesis, University College London (University of London), 2004. http://discovery.ucl.ac.uk/1446592/.

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The cost of losses and control measures attributed to late blight of potatoes caused by Phytophthora infestans, are estimated to exceed $5 billion annually. Breeding for resistance is difficult owing to the tetraploid genotype of potato and current strains of the pathogen have developed resistance to chemical control. Consequently the search for biological control has assumed greater importance. In this investigation an in vivo bioassay was used to select soils antagonistic to late blight of potatoes, caused by Phytophthora infestans. Four out of eight samples demonstrated reproducible antagonism as determined by a reduction in the volume of tuber tissue rotted. A total of 292 bacterial and yeast samples and 20 fungal samples were recovered from suppressive soils using a variety of non-selective and selective media. When these organisms were tested individually against P. infestans in the assay, 15 isolates suppressed tuber rotting by >85% in at least three out of four assays. The antagonists were characterised as Pseudomonas spp. (3 strains), Enterobacter spp. (4 strains), Bacillus spp. (1 strain), Pantoea spp. (2 strains), Citrobacter spp. (1 strain), Buttiauxella spp. (1 strain), Trichosporon spp. (2 strains) and Geotrichum spp. (1 strain) by routine bacteriological tests, fatty acid profiling and partial sequencing of the gene encoding 16S or 18S (where appropriate) ribosomal RNA. Subsequently the possible mechanisms by which the potential biocontrol agents inhibited the disease were examined. Nine isolates showed some evidence of antibiotic production with a Pantoea spp. producing a compound that caused the hyphae of P. infestans to kink and permanently cease growth. Three isolates colonised hyphae of the pathogen and eleven produced siderophores in liquid culture. Hydrogen cyanide, proteolytic, cellulolytic and beta-1,3-glucanase activity was also evident in some species. Significant promotion of axenically grown tomato seedlings, as determined by increased stem and main root elongation, was achieved by ten of the isolates. Three population levels of the isolates were retested for disease inhibition at the end of the investigation. Isolates 3, 7 and 14 exhibited the highest levels of consistent inhibition at the lowest population levels and were therefore tested in combination. This achieved disease suppression that, at an antagonist concentration of 25 cfu/nL, was more consistent than isolate 3 alone and was over 30% greater than either isolate 7 or 14.
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Blanco, Carcache Peter Josephin. "Chemical Characterization and Biological Evaluation of Secondary Metabolites Isolated from Glycosmis ovoidea." The Ohio State University, 2020. http://rave.ohiolink.edu/etdc/view?acc_num=osu1580383951030389.

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Lolato, A. "FROM BENCH TO CHAIRSIDE: EVALUATION OF BIOLOGICAL EFFECTS OF PLATELET CONCENTRATES THROUGH AN IN-VITRO STUDY AND A RANDOMIZED CLINICAL TRIAL." Doctoral thesis, Università degli Studi di Milano, 2017. http://hdl.handle.net/2434/474332.

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Autologous platelet concentrates are widely used in a variety of medical application with the aim of enhancing the regeneration of hard and soft tissue. The rationale of this clinical use lies in their enriched content of growth factors and other key molecules involved in promoting tissue healing. This thesis is composed of two different studies having as a common objective the evaluation of the biological properties of a platelet concentrate, Pure-Platelet Rich Plasma. The first part of the thesis was a pre-clinical in vitro study focused on evaluating the stimulating activity of P-PRP on human osteoblasts (hObs) and human dermal fibroblasts (hDFs). hObs and hDFs were grown in a serum-free medium supplemented by P-PRP obtained from three different donors. hObs and hDFs proliferation was assessed by cell counting and vitality through MTT assays up to 12 days of incubation. hObs osteo-differentiation was tested after 7- and 14- days of incubation by alkaline phosphatase assay. Results showed that cells maintained in the presence of P-PRP display an increased proliferation rate at 12 days of culture, compared to the standard condition. The increased vitality of hObs, induced by P-PRP, noticed after 12 days of culture, was comparable of that of control. In contrast, an increased vitality of hDFs, in comparison to the control, was observed at 12 days of culture. The addition of P-PRP did not further stimulate the enzyme activity either at day 7 and 14. The second part of the thesis was a randomized clinical trial that focused on clinical and radiographic evaluation of the adjunct of P-PRP in the management of edentulous posterior maxillae with a reduced height needing an implant rehabilitation. Clinical and radiographic outcomes of two different approaches were compared up to 3 years after loading: fixed prosthesis supported by 5 to 8.5 mm-long implants which were humidified with P-PRP versus fixed prosthesis supported by 10-mm or longer implants bioactivated with P-PRP and placed following maxillary sinus augmentation with deproteinized bovine bone mixed with P-PRP. Results showed that both procedures were safe and successful, with comparable outcomes. The use of P-PRP did not shift the balance toward one technique over the other one, but it may have contributed to make these procedures similar in term of clinical and radiographic outcomes. Since similar outcomes were reported for both approaches, the most cost-effective treatment appears the appropriate and should be advocated. Therefore, when there is an alternative for restoring the lost dentition, avoidance of a demanding surgical procedure like maxillary sinus augmentation should be considered and recommended. In conclusion, results coming from the in vitro study and the randomized clinical trial may support the clinical use of P-PRP. It may be beneficial in those situations requiring a successful bone and soft tissue regeneration at the site of surgery.
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Bossy, Emmanuel. "Evaluation ultrasonore de l'os cortical par transmission axiale : modélisation et expérimentation in vitro et in vivo." Phd thesis, Université Pierre et Marie Curie - Paris VI, 2003. http://tel.archives-ouvertes.fr/tel-00003220.

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La technique dite de transmission axiale permet une évaluation ultrasonore de l'os cortical, à partir d'une mesure de vitesse. Cette technique est étudiée dans la présente thèse d'une part en modélisant par simulation numérique les phénomènes de propagation mis en jeu, d'autre part à travers une approche expérimentale. Un code de simulation de la propagation tridimensionnelle dans les milieux élastiques anisotropes et hétérogènes, reposant sur un schéma aux différences finies, a été implémenté pour répondre aux contraintes spécifiques de la propagation dans l'os cortical. A l'aide d'un tel code, la nature de l'onde se propageant le long de la corticale des os long est étudiée, en fonction de paramètres osseux tels que la géométrie de l'os (épaisseur corticale, courbure) ou la microporosité intracorticale. Parallèlement, un dispositif expérimental a été développé et adapté au contexte de mesures cliniques. En particulier, un nouveau de type de sonde permettant une mesure reproductible sur l'os (in vivo et in vitro) a été conçu et validé expérimentalement. L'originalité du dispositif tient à la possibilité d'une transmission bidirectionnelle implémentée pour s'affranchir de l'effet des tissus mous. Une étude in vitro a été réalisée sur une cinquantaine de radius humain, combinant les mesures ultrasonores de vitesse en transmission axiale à des mesures par rayons X (scanner médical conventionnel et microtomographie Synchrotron). Pour la première fois, nous avons évalué l'effet respectif de la densité minérale matérielle osseuse et de la microporosité sur la mesure de vitesse ultrasonore. Une campagne de mesure clinique est actuellement en cours, 150 patients et témoins ayant été mesurés à ce jour. La reproductibilité des mesures s'est avérée satisfaisante in vivo, grâce au concept de transmission bidirectionnelle. Nous présentons des résultats préliminaires concernant l'effet de l'âge.
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Moret, Francesca. "Nanovehicles for medical use: an in vitro evaluation of cytotoxicity and drug delivery efficiency." Doctoral thesis, Università degli studi di Padova, 2013. http://hdl.handle.net/11577/3423637.

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The recent progresses offered by nanotechnology in the manipulation of matter lead to the development of several nanoparticles (NPs) and nanodevices for medical applications. In oncology, nanosized objects are particularly attractive as drug delivery systems since it is expected that engineered nanovehicles of appropriate size and functionalised with specific ligands/antibodies will improve the efficacy and selectivity of cancer therapies by exploiting both the passive and active mechanism of tumour targeting. The use of delivery systems is particularly appealing in those therapies in which the administration of the drug in aqueous formulations leads to drug aggregation with decreased activity or scarce bioavailability and tumour selectivity. This is the case of most of the photosensitizers used in photodynamic therapy (PDT), which display hydrophobicity and poor selective accumulation in malignant tissues. In the last decades, PDT is emerging as a promising cancer treatment modality in alternative to conventional therapies, which often demonstrate systemic drug toxicity and multidrug-resistance phenomena. PDT is based on the administration of a photosensitizer (PS) that accumulates in the tumour and after activation with light of appropriate wavelengths, reacts with surrounding molecular oxygen leading to the formation of cytotoxic reactive oxygen species (ROS) with consequent cellular and vasculature damages. In this PhD thesis, three different nanosystems, namely, liposomes, poly-(D,L-lactide-co-glycolide) nanoparticles (PLGA NPs) and ORganically Modified SILica nanoparticles (ORMOSIL NPs) were considered for the delivery of the second generation PS meta-tetra(hydroxyphenyl)chlorin (m-THPC, Temoporfin) to cancer cells in vitro. In particular, drug delivery efficiency, dark and phototoxicity of the m-THPC nanoparticle-based formulations were evaluated. To improve m-THPC bioavailability and tumour selectivity, in the design of the nanovehicles PEGylation and targeting of NPs were considered as essential strategies in order to prolong NP circulation in the bloodstream and exploit active mechanisms of tumour targeting. For the delivery of m-THPC using unilamellar liposomes, four different PEGylated liposomal formulations (trade name Fospeg®, provided by Biolitec Research) in which the length (PEG750, PEG2000, PEG5000) and the density (2%, 8%) of PEG were varied, were tested in vitro in normal lung fibroblasts CCD-34Lu and in cancer A549 lung epithelial cells. Compared to drug delivered in the standard solvent (Foscan®, ethanol/PEG 400/water (20:30:50, by vol.)), liposomal m-THPC showed a decreased intracellular uptake in both cell lines, but the presence of the delivery system highly reduced the dark cytotoxicity of the drug. The reduction of the PS dark toxicity increased with the increasing of PEG density on liposome surface, while the length of PEG chains did not affect significantly the toxic effect of m-THPC in the dark. However, photo-toxicity measured in A549 cells was only slightly affected by the reduced uptake of m-THPC delivered by Fospeg®, and the efficiency of PDT-induced cell killing was comparable among the different liposomal formulations. Interestingly, the intracellular localization of m-THPC delivered as Fospeg® or Foscan® was the same (Golgi apparatus and endoplasmic reticulum) suggesting drug release from liposomes, especially in the presence of the serum proteins, being m-THPC only physically entrapped within liposomes. m-THPC release was confirmed by the fact that liposomes covalently labelled with rhodamine were effectively were taken up by cells but, differently from m-THPC, localized in the acidic compartments of the cells. In spite of m-THPC release from liposomes, the Fospeg® formulation was exploited to target actively cancer cells by liposome conjugation with folic acid (FA), being FA-receptors (FRs) over-expressed in several human tumours. Thus, specific uptake and photo-toxicity of FA-targeted liposomes (FA-Fospeg) with respect to liposomes of the same composition but lacking FA (un-targeted Fospeg) was evaluated in KB (FR-positive) and in A549 (FR-negative) cells. The uptake of m-THPC delivered as FA-Fospeg was twice that of un-targeted Fospeg in KB cells; however only a modest fraction (~ 15%) of the targeted vehicle was effectively internalized by FR-mediated endocytosis while nonspecific internalization remained the prevailing mechanism of liposomes uptake in both cell lines. The improved m-THPC uptake obtained with FA-Fospeg in FR over-expressing cells translated into a 1.5 higher photo-induced toxicity. A novel formulation of bare and PEGylated PLGA NPs in which m-THPC was physically entrapped were synthesized (Prof J. Kos, University of Ljubljana) and evaluated in vitro and in vivo for phototherapy and fluorescence-based tumour imaging applications. In vitro studies carried out on A549, MCF10A neo T (breast cancer cells) and U937 (lymphoma derived pro-monocytic cells) cell lines, showed reduced uptake of PEGylated NPs with respect to non PEGylated NPs. As for Fospeg®, the use of the delivery system led to a significant reduction of m-THPC dark toxicity.. As expected for PEGylated NPs, the efficiency of cell internalization of m-THPC entrapped in PEG PLGA was reduced by 50% with respect to that in the standard solvent, but surprisingly cytotoxicity induced in irradiated A549 cells was quite comparable. At 24 h post-injection in vivo biodistribution of bare and PEGylated PLGA NPs compared to Foscan® was assessed in mice, showing very similar drug accumulation in the major organs but reduced skin uptake for both NP formulations. Thus, even if m-THPC release in the presence of serum proteins was measured in vitro, PEGylated PLGA NPs appeared potentially useful as stealth and biodegradable PS delivery systems. The premature release of the PS from the delivery system was completely avoided with the covalent link of m-THPC to the silane matrix of highly PEGylated ORMOSIL NPs (Prof. F. Mancin, University of Padova). This type of NPs exhibited a very low extent of cell internalization in vitro due to their high degree of PEGylation, making NP targeting an essential prerequisite to enhance intracellular drug delivery. In addition to FA, the RGD peptide and the antibody Cetuximab, which bind respectively the integrin α5ß3 receptor and epidermal growth factor receptor (EGFR), were exploited as targeting agents for ORMOSIL NPs and the specific uptake and photo-toxicity of m-THPC delivered by conjugated NPs were evaluated in vitro. The study revealed how the characteristics of the targeting agents are of crucial importance in determining the performances of targeted PEGylated nanosystems. In fact, the hydrophobic FA was very likely buried in the PEG layer and was unable to drive the selective uptake of ORMOSIL NPs while RGD peptide and Cetuximab antibody displayed some selectivity toward cells over-expressing their receptors (HUVEC cells over-expressing integrin α5ß3 receptors and A431 cells over-expressing EGFR). Unfortunately, the enhanced and selective uptake of m-THPC obtained by the two latter targeted ORMOSIL NPs was not accompanied by efficient and selective photo-induced cytotoxicity; it appeared that the selectivity of NP uptake was achieved in scarce drug cell loading conditions, determining only low PDT efficacy. The assessment of the biocompatibility of NPs is of fundamental importance for their safe use in nanomedicine. Since ORMOSIL NPs are not well characterised from this point of view, a toxicological characterization of empty ORMOSIL NPs were carried out in vitro in normal (CCD-34Lu) and cancer (A549, NCIH-2347) lung cells. The study included traditional cell viability and cytotoxicity tests (MTS test, LDH release assay, ROS production, cell membrane permeabilization measurements and electron microscopy analyses) in combination with a genome-wide analysis of gene expression profiles of cells exposed to NPs. The results pointed out that different types of cells respond quite differently to NPs and PEGylation of NPs highly affected the cytotoxicity profiles. PEGylation of ORMOSIL NPs completely abolished the toxicity of the nanosystem in CCD-34Lu and NCIH-2347 cells. On the contrary PEG ORMOSIL NPs induced necrotic cell death of A549 by increasing the permeability of the plasma membrane. At sub-lethal concentrations alteration of gene expression and inflammation were measured in A549 cells exposed to. The different response to PEG NPs is very likely explained considering the peculiarity of the cell type and the particular interaction of NPs with cell and internalization mechanisms. In fact, it was shown clearly that NPs internalized in A549 cells localized in and affected the morphology and the functioning of pulmonary surfactant containing lamellar bodies, peculiar of alveolar type II cells of which A459 cells represents an in vitro models.
Il recente progresso apportato dalla nanotecnologia nella manipolazione della materia ha portato al conseguente sviluppo di diversi tipi di nanoparticelle e nanodevices per applicazioni biomediche. In campo oncologico, oggetti dalle dimensioni nanometriche si sono dimostrati particolarmente interessanti in qualità di sistemi per la veicolazione di farmaci, poiché si presume che l’ingegnerizzazione dei nanoveicoli e la loro funzionalizzazione con specifici ligandi/anticorpi possa portare ad un miglioramento dell’efficacia e della selettività delle terapie antitumorali sfruttando meccanismi di targeting del tumore sia passivi che attivi. L’utilizzo di sistemi di veicolazione è particolarmente importante nel caso di terapie nelle quali la somministrazione dei farmaci in formulazioni acquose conduce a fenomeni di aggregazione con conseguente diminuzione di attività e di disponibilità nel circolo sanguineo, o nel caso di farmaci con scarsa selettività per il tumore. Appartengono a queste categorie la maggior parte dei fotosensibilizzanti utilizzati in terapia fotodinamica (PDT), poiché farmaci di natura idrofobica e con scarsa selettività di accumulo nei tessuti maligni. Negli ultimi decenni, la PDT si è dimostrata una promettente tecnica di trattamento del cancro in alternativa alle terapie convenzionali che invece generalmente dimostrano alta tossicità sistemica e fenomeni di farmaco-resistenza. La PDT si basa sulla somministrazione di un fotosensibilizzante (PS) che accumulatosi nel tumore, e dopo essere stato attivato con opportune lunghezze d’onda di luce, è in grado di reagire con l’ossigeno molecolare che lo circonda generando specie reattive dell’ossigeno (ROS) altamente citotossiche con conseguente danno cellulare e vascolare. In questa tesi di dottorato, tre diversi nanosistemi quali liposomi, nanoparticelle PLGA (poly-(D,L-lactide-co-glycolide)) e nanoparticelle di silice organicamente modificata (ORMOSIL), sono stati presi in considerazione per la veicolazione del fotosensibilizzante di seconda generazione meta-tetra(hydroxyphenyl)chlorin (m-THPC, Temoporfin) in cellule tumorali in vitro. In particolare, sono state valutate l’efficienza di veicolazione del farmaco, la tossicità buia e fotoindotta delle diverse formulazioni di m-THPC. Per migliorare la biodisponibilità e la selettività per il tumore della m-THPC, nella progettazione dei nanoveicoli sono state considerate quali strategie essenziali la pegilazione e il targeting delle particelle, in modo da prolungare la circolazione dei nanosistemi nel flusso sanguineo e in modo da sfruttare meccanismi attivi di targeting del tumore. Per la veicolazione della m-THPC utilizzando liposomi unilamellari sono state saggiate in vitro quattro diverse formulazioni liposomiali pegilate (Fospeg®, fornito dalla ditta Biolitec Research) con lunghezza (PEG750, PEG2000, PEG5000) e densità del PEG (2%, 8%) variabili, utilizzando come linee cellulari fibroblasti di polmone normali (CCD-34Lu) e cellule tumorali di epitelio polmonare (A549). Se paragonate al farmaco somministrato in forma libera in soluzione (Foscan®, etanolo/PEG 400/acqua (20:30:50, vol/vol)), le formulazioni liposomiali di m-THPC hanno mostrato una ridotta internalizzazione in entrambe le linee cellulari, ma nello stesso tempo la presenza del sistema di veicolazione ha portato alla significativa riduzione della tossicità buia del farmaco. La riduzione della tossicità buia del farmaco è risultata proporzionale all’aumento della densità di PEG sulla superficie del liposoma mentre la lunghezza delle catene di PEG sembra essere ininfluente nel limitare l’effetto tossico della m-THPC al buio. Comunque, la ridotta internalizzazione della m-THPC veicolata tramite Fospeg® influenza in modo solo parziale la fototossicità misurata in cellule A549, mentre l’efficienza d’induzione di mortalità in seguito a trattamento fotodinamico è risultata paragonabile tra le diverse formulazioni saggiate. Indipendentemente dalla veicolazione tramite Fospeg® o Foscan®, è stata riscontrata la medesima localizzazione intracellulare della m-THPC (apparato del Golgi e reticolo endoplasmatico) suggerendo il possibile rilascio del farmaco dalla formulazione liposomiale in presenza di proteine del siero, essendo la m-THPC solamente fisicamente intrappolata all’interno dei liposomi. Il rilascio della m-THPC è stato confermato dal fatto che liposomi nei quali viene legata covalentemente rodamina vengono effettivamente internalizzati dalle cellule e, differentemente dalla m-THPC, si accumulano nei compartimenti acidi intracellulari. Nonostante il rilascio del fotosensibilizzante dai liposomi, la formulazione Fospeg® è comunque stata utilizzata per veicolare selettivamente la m-THPC in cellule cancerose tramite la coniugazione dei liposomi con acido folico, essendo i recettori del folato sovraespressi in diversi tumori umani. Quindi sono state valutate l’internalizzazione specifica e la fototossicità di liposomi coniugati con folato (liposomi folato) rispetto a liposomi della stessa composizione ma privi di acido folico (liposomi non coniugati) in cellule KB e A549, rispettivamente positive e negative per l’espressione di recettori del folato. In cellule KB, l’internalizzazione della m-THPC si è rivelata doppia in caso di veicolazione con liposomi folato, malgrado solo una modesta parte (~15%) dei nanosistemi coniugati con folato siano effettivamente internalizzati tramite meccanismi di endocitosi mediata da recettore, essendo invece un’internalizzazione di tipo aspecifico il meccanismo prevalente per l’internalizzazione dei liposomi in entrambe le linee cellulari saggiate. In ogni caso, all’aumentato accumulo di m-THPC ottenuto tramite la veicolazione con Fospeg coniugato con folato in cellule che sovra esprimono il recettore, ne è conseguita una tossicità dopo irradiamento aumentata di circa 1.5 volte. Riguardo invece la veicolazione di m-THPC tramite particelle PLGA, formulazioni nude o pegilate sono state sintetizzate (Prof. J. Kos, Università di Lubiana) e saggiate sia in vitro che in vivo per la loro potenziale applicazione in fototerapia o in diagnosi dei tumori, sfruttando la fluorescenza del fotosensibilizzante fisicamente intrappolato all’interno delle particelle. Studi in vitro condotti su cellule A549, MCF10A neo T (derivate da tumore del seno) e U937 (cellule pro-monocitiche derivate da linfoma), hanno mostrato una ridotta internalizzazione della formulazione di m-THPC pegilata rispetto a quella nuda. Anche con particelle PLGA e come già visto per il Fospeg®, l’utilizzo di un sistema di veicolazione porta alla significativa riduzione della citotossicità buia della m-THPC. L’efficienza d’internalizzazione del fotosensibilizzante veicolato tramite particelle PLGA pegilate viene ridotta circa del 50% rispetto alla sua veicolazione nella formulazione standard ma sorprendentemente l’effetto citotossico indotto in cellule A549 irradiate è quasi paragonabile. La biodistribuzione della m-THPC (veicolata tramite nanoparticelle PLGA nude o pegilate o nella formulazione standard) è stata valutata 24 ore dopo la sua iniezione in topi, mostrando una simile distribuzione nei vari organi ma una significativa riduzione dell’accumulo a livello epidermico per entrambe le formulazioni nanoparticellari. Quindi, nonostante anche per le particelle PLGA pegilate sia stato misurato il rilascio di m-THPC in presenza di proteine sieriche, esse appaiono un buon sistema di veicolazione di fotosensibilizzanti soprattutto per le loro caratteristiche ‘stealth’ e per la loro biodegradabilità. Il rilascio prematuro del fotosensibilizzante è stato invece completamente limitato con il legame covalente della m-THPC alla matrice silanica di particelle ORMOSIL altamente pegilate (Prof. F. Mancin, Università di Padova). Tuttavia questo tipo di particelle ha mostrato un’internalizzazione intracellulare estremamente bassa derivata dall’elevato grado di pegilazione, ponendo come requisito essenziale il targeting delle particelle. In qualità di agenti di targeting per le particelle ORMOSIL pegilate sono stati valutati, oltre al folato, anche il peptide ciclico RGD e l’anticorpo Cetuximab, essendo questi ultimi in grado di legarsi rispettivamente ad integrine α5ß3 e al recettore del fattore di crescite dell’epidermide (EGFR). L’internalizzazione selettiva e la fototossicità della m-THPC veicolata tramite le tre diverse nanoparticelle funzionalizzate sono state valutate in vitro in opportuni sistemi cellulari. Tale studio ha mostrato come le caratteristiche dell’agente di targeting influenzino in modo sostanziale la selettività di tali nanosistemi pegilati. Infatti, mentre il folato altamente idrofobico si ripiega verosimilmente verso la corona di PEG rendendosi inefficace nel guidare selettivamente le particelle ORMOSIL, il peptide RGD e l’anticorpo Cetuximab hanno mostrato una certa selettività nei confronti di cellule sovraesprimenti i rispettivi recettori (cellule HUVEC sovraesprimenti recettori per le integrine α5ß3 e cellule A431 sovraesperimenti EGFR). Tuttavia, l’aumentato accumulo selettivo della m-THPC ottenuto tramite la coniugazione delle nanoparticelle con RGD e Cetuximab non ha portato ad una conseguente aumentata efficienza e selettività nell’induzione di citotossicità in seguito ad irradiamento. Tale risultato è verosimilmente imputabile al fatto che la selettività di accumulo delle nanoparticelle viene raggiunta in condizioni nelle quali la disponibilità del farmaco nelle cellule è troppo bassa, con conseguente scarsa efficacia dopo trattamento fotodinamico. La valutazione della biocompatibilità delle nanoparticelle risulta di fondamentale importanza per un’applicazione sicura della nanotecnologia in campo medico. Quindi, poiché le nanoparticelle ORMOSIL non sono ancora state ben caratterizzate da tale punto di vista, un loro profilo tossicologico è stato tracciato in vitro in cellule polmonari normali (CCD-34Lu) e tumorali (A549, NCIH-2347). Nello studio sono stati combinati esperimenti tradizionali di valutazione della vitalità cellulare e della citotossicità (test MTS, saggio del rilascio di LDH, valutazione della produzione di ROS, misure di permeabilizzazione di membrana, analisi di microscopia elettronica) con un’analisi dei profili di espressione genica estesa all’intero genoma di cellule esposte alle nanoparticelle. I risultati hanno mostrato come diversi tipi di cellule rispondono in modo abbastanza differente all’esposizione alle nanoparticelle e come la pegilazione influisce fortemente sui profili di citotossicità. Infatti, la pegilazione delle particelle ORMOSIL è in grado di abolire completamente la tossicità dei nanosistemi in cellule CCD-34Lu e NCIH-2347 mentre le stesse particelle pegilate inducono morte per necrosi in cellule A549, aumentandone la permeabilità di membrana. Inoltre nelle medesime cellule, concentrazioni sub-letali di nanoparticelle inducono infiammazione e alterazione dell’espressione genica. La differente risposta all’esposizione alle nanoparticelle pegilate delle cellule A549 è spiegabile considerando la peculiarità di questo tipo cellulare, e in particolare l’interazione delle particelle stesse con le cellule e il loro meccanismo d’internalizzazione. Infatti, è stato mostrato in modo chiaro che le nanoparticelle vengono internalizzate in corpi lamellari contenenti il surfattante polmonare, peculiari di cellule alveolari di tipo II, delle quali le cellule A549 rappresentano un modello in vitro. Tale accumulo delle nanoparticelle nei corpi lamellari porta alla modifica della morfologia degli stessi e una pesante alterazione della loro funzionalità.
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Schoutteten, Laetitia. "Photophysique et photochimie du calcium green in vitro et ex vivo." Cachan, Ecole normale supérieure, 1997. http://www.theses.fr/1997DENS0022.

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LLa photophysique du calcium green a été étudiée grâce au montage de fluorescence résolue en temps sous microscope. Cette sonde est caractérisée par des durées de vie différentes selon l'état de complexation au calcium. Elle n'est pas sensible a la viscosité et peu sensible a la polarité, mais sensible a l'hydrolyse, a l'adsorption et au ph. La molécule sonde le milieu dans son état fondamental. Il existe deux conformations stables de la sonde, caractérisées par leurs durées de vie. La durée de vie courte est due au transfert de charges intramoléculaire. Des études ex vivo sur des cellules ont été faites : étalonnage, détermination de la concentration en calcium, mesure d'adsorption de la sonde par anisotropie de fluorescence.
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Moniot, Aurélie. "Etude des effets anti-inflammatoires et anti-cancéreux de nouvelles molécules agrosourcées à motif pyridazinone Synthesis and biological evaluation of pyridazinone derivatives as potential antiinflammatory agents Osteoinductive Material to Fine-Tune Paracrine Crosstalk of Mesenchymal Stem Cells With Endothelial Cells and Osteoblasts." Thesis, Reims, 2020. http://www.theses.fr/2020REIMS022.

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L’ostéosarcome est un cancer primitif rare de l’os dont les approches thérapeutiques actuelles sont encore malheureusement insuffisantes pour espérer une totale guérison, et pour lequel la recherche de nouvelles molécules efficaces est constante. De plus, après exérèse de la tumeur, le défaut généré peut nécessiter de recourir à des matériaux aidant la reconstruction osseuse. Or le potentiel inflammatoire de ces matériaux est bien documenté. Les inhibiteurs de phosphodiestérase de type 4, parmi lesquels des molécules à motif pyridazinone, ont d’ores et déjà fait leurs preuves en tant qu’agents anti-cancéreux et anti-inflammatoires dans un certain nombre de modèles cellulaires. L’objectif de ce travail a été d’évaluer les effets anti-cancéreux et anti-inflammatoires de nouvelles molécules à motif pyridazinone dérivant de précurseurs agrosourcées. Les effets anti-inflammatoires ont été validés sur la production cytokinique, le potentiel migratoire et le maintien des capacités phagocytaires des neutrophiles primaires humains in vitro et dans un modèle murin d’inflammation in vivo. Ces molécules ont également montré leur potentiel thérapeutique dans des modèles d’ostéosarcomes in vitro où elles sont en capacité de bloquer la prolifération et la migration cellulaire tout en induisant l’apoptose des cellules cancéreuses. In vivo ces molécules sont capables de ralentir la progression tumorale et de maintenir la qualité minérale osseuse. Les résultats obtenus indiquent que ces nouvelles molécules à motif pyridazinone pourraient s’intégrer dans des polythérapies pour leurs potentiels thérapeutiques à la fois anti-cancéreux et anti-inflammatoire
Osteosarcoma is a rare primary bone cancer for which current therapeutic approaches are unfortunately insufficient to provide a total cure. So the need for new molecules development is constant. In addition, after tumor excision, bone defect may require materials to fill and support bone rebuilding. The inflammatory potential of such materials is well documented. Phosphodiesterase type 4 inhibitors, including pyridazinone-scaffold based molecules, have already proven themselves as anti-cancer and anti-inflammatory agents in a number of in vitro models. The goal of this work was to assess the anti-cancer and anti-inflammatory effects of new pyridazinone-scaffold based molecules derived from agrosourced precursors. Anti-inflammatory effects have been assessed on cytokine production, migratory potential and the phagocytic abilities of human primary neutrophils in vitro and in an in vivo model of inflammation in mice. These molecules have also shown their therapeutic potential in in vitro osteosarcoma models where they decreased cell proliferation and migration while inducing apoptosis in cancer cells. In vivo, these molecules were able to decrease tumor growth and maintain mineral bone quality. These results indicated that new pyridazinone scaffold-based molecules might be integrated into a multi-therapy, both for their anti-cancer and anti-inflammatory therapeutic potential
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Maurer, Christine Katharina [Verfasser], and Rolf W. [Akademischer Betreuer] Hartmann. "From in vitro to in vivo : establishment of a test system for the biological evaluation of novel quorum sensing inhibitors as anti-infectives against Pseudomonas aeruginosa / Christine Katharina Maurer. Betreuer: Rolf W. Hartmann." Saarbrücken : Saarländische Universitäts- und Landesbibliothek, 2015. http://d-nb.info/107519038X/34.

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Vasanthi, Bathrinarayanan Pranav. "Evaluating the biological effects of electronic cigarettes using a novel in-house designed aerosol delivery system and an in-vitro co-culture model of the human airways." Thesis, Aston University, 2018. http://publications.aston.ac.uk/37691/.

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Although electronic cigarettes (ECs) have been widely promoted as safer alternatives to tobacco cigarettes, limited scientific data is currently available on their possible health effects. The current study aims to investigate the potential effects of ECs using a novel in-house designed cigarette/EC aerosol delivery system and physiologically relevant 2D and 3D in-vitro human airway models. Submerged cultures of BEAS 2B and CALU 3 bronchial epithelial cells were used to investigate the effects of nicotine and its oxidative metabolite cotinine. Results demonstrated that neither nicotine nor cotinine had any significant impact on the bronchial epithelial cell viability or IL-6/IL-8 pro-inflammatory mediators’ production. Further, treatment of submerged cultures of a number of airways related cell types to extracts of commercially available ECs of different nicotine strength, flavourings and brands showed that while the differing nicotine strengths had no impact on the cell viability, flavourings significantly influenced cell viability, with strawberry and cherry flavoured ECs demonstrating the highest cytotoxicity. Moreover, same flavours from different brands produced different effects on cells. Finally, a co-culture human airways model consisting of CALU 3 bronchial epithelial cells and MRC-5 pulmonary fibroblasts cultured at air-liquid-interface were treated to whole cigarette smoke (WCS) and EC vapour (ECV) at different exposure times (7 m, 1 h, 2 h, 3 h, 4.5 h and 6 h) as per the ISO:3308 standard smoking regime using an in-house designed bespoke, automated aerosol delivery system. Results demonstrated that while WCS caused a significant reduction in cell viability post 7 min exposure, ECV produced cytotoxic effects only at exposure times ≥ 3 h. A significant increase in oxidative stress and IL-6/IL-8 production was observed post 3 h ECV treatment, both of which are hallmark characteristics of airway inflammatory conditions like chronic obstructive pulmonary disorder. Overall, results from the current study suggest that ECs have the potential to cause substantial airways damage, and as yet, cannot be regarded as safe alternatives to tobacco cigarettes. Importantly, a standardised testing method is urgently required in order to elucidate on the long-term health effects of ECs.
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Andrade, Lilian Cristina Morais de. "Avaliação do comportamento metabólico de cisticercos de Taenia crassiceps cultivados in vitro e expostos a condições estressantes." Universidade Federal de Goiás, 2013. http://repositorio.bc.ufg.br/tede/handle/tede/5874.

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Taenia crassiceps cysticerci possess antigenic similarities to T. solium cysticerci and because of this and added to the relative easiness in its maintainance in laboratory they are used as an experimental model to T. solium studies. The objective of this study was to analyze the in vitro influence of glucose and insulin on the energetic and respiratory metabolism of T. crassiceps cysticerci exposed to low dosages of anti-helminthic drugs, albendazol and praziquantel, and also to different concentrations of glucose and insulin. Glucose is the main energy source to these parasites in their larval and adult stages and glycogen is their main energetic reserve. Glycogen may be converted into glucose in case of low glucose uptake and is stored in the cysticerci tegument. The cysticerci were collected from the peritoneal cavity of BALB/c female mice experimentally infected and maintained in the animal facilities of IPTSP/UFG. After 24hours of culture in RPMI culture medium supplemented and with glucose, glargine insulin (LANTUS®, Sanofi Aventis), albendazol and praziquantel, the cysticerci were removed and the medium was frozen in liquid nitrogen as to allow the metabolix stasis. Afterwards this culture medium was analyzes through HPLC as to permit the quantification of the following organic acids related to the carbohydrates metabolism: lactate and pyruvate, intermediary metabolism: citrate, α-ketoglutarate, succinate, fumarate, malate and oxaloacetate, fatty acids metabolism: β-hydroxibutyrate and propionate. It was possible to detect propionate and β-hydroxibutyrate secreted by T. crassiceps cysticerci which indicates the fatty acids oxidation as an alternative energy xv source used by the initial stage cysticerci which are in rapid growth. Also the detection of organic acids from the citric acid cycle indicates the in vitro aerobiosis performed by the initial stage cysticerci.
Os cisticercos de Taenia crassiceps possuem similaridades antigênicas com cisticercos de Taenia solium e por este motivo, associado ao fato de uma relativa facilidade de sua manutenção em animais de laboratório, são utilizados como modelo experimental para estudos da cisticercose por T. solium. O objetivo deste trabalho foi analisar in vitro a influência da glicose e da insulina no metabolismo energético e respiratório de cisticercos de T. crassiceps expostos aos fármacos anti-helmínticos albendazol e praziquantel em baixas doses, e diferentes concentrações de glicose e insulina. A glicose é a principal fonte de energia para estes parasitos tanto na fase larval quanto adultos e o glicogênio, que pode ser novamente convertido em glicose, é fonte de reserva energética, sendo encontrado armazenado em suas membranas. Os cisticercos foram provenientes da cavidade peritoneal de camundongos fêmeas Balb/c infectados experimentalmente e mantidos no biotério do IPTSP/UFG. Após 24 horas de cultivo em meio RPMI® suplementado e adicionado de glicose, insulina glargina (LANTUS®, Sanofi Aventis), albendazol e praziquantel, foram retirados da placa e o meio foi congelado em nitrogênio líquido para ocorrer estase metabólica. Posteriormente o meio de cultura passou por um processo de extração sendo analisado em Cromatografia Líquida de Alta Performance com detector UV (CLAE) dos seguintes ácidos orgânicos oriundos do metabolismo de carboidratos (lactato, piruvato), metabolismo intermediário (citrato, α-cetoglutarato succinato, fumarato, malato, oxaloacetato) e metabolismo de ácidos graxos (β-hidroxibutirato e propionato). Foram detectados propionato e β-hidroxibutirato secretados por cisticercos de T. crassiceps indicando a oxidação de ácidos graxos como fonte de energia alternativa, utilizada em especial nos estádios de crescimento e também em situações de baixas concentrações de substancias energéticas provenientes do hospedeiro. Em adição, a detecção de xiv ácidos orgânicos do ciclo do ácido cítrico nos cisticercos analisados confirma a aerobiose in vitro do estádio evolutivos inicial dos cisticercos.
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M'Bengue, Marie-Stella. "Conception et évaluation d'une endoprothèse vasculaire par impression 3D pour le traitement des anévrismes complexes de l'aorte abdominale." Electronic Thesis or Diss., Université de Lille (2022-....), 2022. http://www.theses.fr/2022ULILS057.

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La réparation endovasculaire (EVAR) d'un anévrisme de l'aorte abdominale (AAA) consiste en la mise en place d'une endoprothèse (EDP) par chirurgie mini-invasive au sein de l'anévrisme. Cet acte permet de prévenir la rupture des tissus endommagés impliqués dans un AAA, défini comme la dilatation localisée du diamètre de l'aorte. Lorsque l'amont de l'anévrisme englobe les artères périphériques rénales et/ou viscérales, l'AAA est qualifié de complexe. Dans ce cas, l'EDP déployée est dite « fenêtrée », en d'autres termes, perforée à l'emplacement des jonctions vers les artères périphériques. La prise en charge dans le cadre d'un AAA complexe devient alors plus limitante car l'EDP fenêtrée sera conçue sur mesure afin de correspondre à l'anatomie de l'anévrisme et à la position des artères périphériques du patient. Cela implique un délai de fabrication de plusieurs semaines, limite la prise en charge aux anévrismes stables et exclut les situations d'urgence. Dans ce contexte, l'impression 3D présente un intérêt considérable pour la fabrication d'EDP sur mesure et dans des délais très courts. Ainsi, l'objectif de ce travail de thèse est de concevoir un prototype d'endoprothèse par impression 3D d'un polyuréthane thermoplastique (TPU) de grade médical (élastomère thermoplastique). Le présent travail permettra de valider le procédé de conception et la fonctionnalité de notre 3D-EDP pour son application finale en tant que dispositif médical implantable.Dans un premier temps, l'impact du procédé de fabrication sur les propriétés chimiques, physiques et physico-chimiques du TPU a été étudié à chaque étape, des granulés à la stérilisation par rayons gamma d'une prothèse fabriquée par dépôt de filament fondu (FDM). L'évaluation préliminaire in vitro de la cytotoxicité et de l'hémocompatibilité du TPU a été réalisée après l'étape d'impression 3D et de stérilisation. Un vieillissement préliminaire du TPU en conditions oxydantes extrêmes a été réalisé afin de prédire l'évolution de ses propriétés sur le long terme. Par la suite, une stratégie de conception d'un prototype implantable par voie endovasculaire a été développée. Les propriétés de ce prototype stérilisé ont été caractérisées par différentes techniques (CES, ATG, DSC, FTIR, MEB, goniométrie, traction uniaxiale, …). Ses propriétés biologiques ont été évaluées in vitro par des tests de cytocompatibilité, hémocompatibilité et contact avec les macrophages pendant 24 heures (inflammation aigüe). L'évolution de ses propriétés physico-chimiques et mécaniques a été suivie par des études de vieillissement in vitro.La caractérisation des propriétés chimiques, physiques et physico-chimiques du TPU a montré que l'impression 3D FDM et la méthode de stérilisation par rayons gamma constituent une voie de fabrication viable d'un prototype comprimable dans un cathéter d'introduction endovasculaire. L'évaluation biologique in vitro a montré la cytotocompatibilité du prototype par la méthode de l'extrait. De plus, le prototype s'est révélé faiblement hémolytique et les plaquettes adhérant à sa surface n'étaient pas activées. La faible sécrétion de cytokines (IL-6 et TNF-a) au contact des macrophages inactivés a montré que le prototype d'EDP ne présente pas de caractère pro-inflammatoire. Enfin, les études de vieillissement ont montré un impact sur les propriétés mécaniques et de surface de notre prototype d'EDP sans toutefois compromettre sa fonctionnalité. Par la suite, la stratégie de conception pourrait évoluer vers une fonctionnalisation de l'EDP afin de prévenir les infections et les thromboses responsables respectivement de 2% et 6% des complications post-opératoires
Endovascular repair (EVAR) of an abdominal aortic aneurysm (AAA) involves the placement into the aneurysm of a stent graft (SG) by minimally invasive surgery. This procedure prevents rupture of the damaged tissue involved in an AAA, defined as a localized diameter dilation of the aorta. When the upstream portion of the aneurysm includes the peripheral renal and/or visceral arteries, the AAA is qualified as complex. In this case, the deployed SG is said “fenestrated”, in other words, perforated at the site of junctions to the peripheral arteries. Management of a complex AAA becomes more limiting as the fenestrated SG will be custom designed to match the anatomy of the aneurysm and the position of the peripheral arteries of the patient. This implies a manufacturing delay of several weeks, limits the management to stable aneurysms and excludes emergency situations. In this context, 3D printing (3DP) is of considerable interest for the fabrication of custom-made SGs in a very short time frame. Thus, the objective of this thesis work is to design a SG prototype by 3D printing of a medical grade thermoplastic polyurethane (TPU) (thermoplastic elastomer). The present work will validate the manufacturing process and the functionality of our 3DP-SG for its final application as an implantable medical device.First, the impact of the manufacturing process on the chemical, physical and physicochemical properties of TPU was studied at each step, from the pellets to the gamma-ray sterilization of a graft manufactured by fused filament deposition (FDM). In vitro preliminary evaluation of the cytotoxicity and hemocompatibility of TPU was carried out after the 3D printing and sterilization step. Aging of TPU under extreme oxidizing conditions was performed to predict the evolution of its properties in the long term. Subsequently, a design strategy for an endovascular implantable prototype was developed. The properties of said prototype were characterized by different techniques (SEC, TGA, DSC, FTIR, SEM, goniometry, uniaxial traction, ...). Its biological properties were evaluated in vitro by tests of cytocompatibility, hemocompatibility and contact with macrophages for 24 hours (acute inflammation). Moreover, the evolution of its physicochemical and mechanical properties was evaluated by in vitro aging studies.The characterization of the chemical, physical and physicochemical properties of TPU enabled the validation of a FDM printing manufacturing route and gamma ray sterilization of a crimpable SG prototype. The in vitro biological evaluation showed the non-cytotoxicity of the SG prototype by the extraction method. Moreover, the prototype was found to be weakly hemolytic and the platelets adhered on its surface were not activated. The low secretion of cytokines (IL-6 and TNF-α) upon contact with inactivated macrophages showed that the SG prototype does not exhibit a pro-inflammatory characteristic. Finally, aging studies showed an impact on the mechanical and surface properties of our SG prototype without compromising its functionality. Subsequently, the design strategy could evolve towards a functionalization of the SG prototype in order to prevent infections and thrombosis responsible for 2% and 6% of postoperative complications respectively
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MORENO, CAROLINA dos S. "Avaliação dos efeitos da radiação ionizante e do Resveratrol na cultura de células tumorais de pulmão." reponame:Repositório Institucional do IPEN, 2016. http://repositorio.ipen.br:8080/xmlui/handle/123456789/26829.

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O carcinoma mucoepidermóide de pulmão, um tipo histológico que deriva das glândulas mucosas traqueobrônquicas, manifesta-se com sintomas obstrutivos e tende a comprometer a traqueia. Com finalidade curativa ou paliativa da doença, atualmente há uma forte tendência na oncologia em desenvolver estratégias terapêuticas que visam à administração de compostos com elevado potencial de otimizar o efeito do tratamento com a radiação ionizante, de modo a aumentar a morte de células tumorais e preservar íntegras as células dos tecidos sadios adjacentes. A intensa busca por tais estratégias evidenciou resultados promissores apresentados pelo composto denominado Resveratrol (3,4,5-trihidroxiestilbeno), tornando-o amplamente divulgado e alvo de intensas pesquisas. O principal objetivo do presente estudo foi determinar o efeito do resveratrol em cultura celular de carcinoma mucoepidermóide de pulmão exposta a diferentes doses de radiação ionizante. Para tal, os estudos de citotoxicidade utilizando o método de incorporação do vermelho neutro, e da determinação da dose letal 50 % (DL50) da radiação ionizante, foram realizados em cultura de células da linhagem NCI-H292 [H292] (ATCC® CRL-1848TM), CCIAL069. Com base nos resultados do IC50% (401,5 μM) e da DL50 (693 Gy) foram realizados o teste in vitro do micronúcleo e os ensaios para avaliar o efeito do resveratrol no ciclo celular, reparo da lesão no DNA e processo de lesão radioinduzida, necrose e apoptose celular. Os resultados evidenciaram que o resveratrol na concentração de 30 μM apresenta uma importante capacidade em promover danos às células NCI-H292 após 24 h da irradiação.
Tese (Doutorado em Tecnologia Nuclear)
IPEN/T
Instituto de Pesquisas Energeticas e Nucleares - IPEN-CNEN/SP
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Sansook, Supojjanee. "Biological evaluation of ferrocene derivatives." Thesis, University of Sussex, 2017. http://sro.sussex.ac.uk/id/eprint/68599/.

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Organometallic complexes containing transition metals, such as Ru(II), Os(II), Ir(III), have been moderately and recently used in medicinal chemistry as anticancer, antimalarial, antimicrobial or diagnostic agents. Current trends have led researchers to explore and define new synthetic methods in the quest for the design of new drugs and reduce the inherit associated toxic side-effects by using metal based compounds. Ferrocene based derivatives have been subjected to study for their biological and medicinal applications. Examples include ferrocenophane polyphenol, ferrocenyl quinone methides, ferrocenyl-aminoquinoline-carboxamide and a ferrocene-substituted hydroxytamoxifen, which has been proved as a potential new breast cancer therapeutic. Ferroquine displays antimalarial activity and ferrocifen is a tamoxifen-ferrocene anticancer agent. During the course of our research, we have focused on synthesizing and studying the biological activity of novel organometallic compounds containing the corresponding ferrocene moiety. We aimed to make, at least, 3 different families of compounds, which were cannabinoid receptor (CB1/CB2 receptor agonists), histone deacetylase (HDAC) selective inhibitors and general kinase inhibitors. Firstly, a review covering the state-of-the-art in bioorganometallic chemistry will be presented. Secondly, we started with the synthesis of a small library of compounds containing the following groups: ferrocenylamine, 4-oxo-1, 4-dihydropyridine and dihydroquinoline. We used aminoferrocene as a bioisostere of the adamantylamine group where previous studies of compounds containing the latter group had showed it to effectively interact with the cannabinoid receptors, CB1 and CB2. Some of our compounds displayed good to excellent potency in the nM range against the CB1 and CB2 receptors. Thirdly, we embarked to synthesise HDAC inhibitors knowing their potential as anti-cancer drugs and trying to obtain, wherever possible, enzyme isoform selectivity. One of the well-known HDAC inhibitors is suberoylanilide hydroxamic acid (SAHA). Vorinastat, as it is also known, has received Food and Drug Administration approval for treating patients with cutaneous T-cell lymphoma. The compound developed in our group by replacing ferrocene for the phenyl ring in SAHA, called JAHA, is another example of a highly potent HDAC inhibitor. Our research led to compounds where the hydroxamic acid moiety in JAHA has been replaced by a benzamide group. This transformation has produced a significant effect in delivering a potent HDAC3 selective HDAC inhibitor. This is supported by biological studies and a molecular modelling rationalisation. Next, a series of oxindole based analogues have been synthesized by the Knoevenagel condensation reaction of: 5-(pentafluorosulfanyl)-1,3-dihydro-indol-2-one and 6-(pentafluorosulfanyl)-1,3-dihydro-indol-2-one compound with: ferrocenecarboxaldehyde and pyrrole-2-carboxaldehyde. The compounds thereby synthesised have been studied against a panel of kinases, and kinase inhibitory data will be discussed and presented. In a Future directions section, we will describe the synthesis of FAAH (fatty acid amide hydrolase) inhibitors based on an aminoferrocene backbone.
21

Abel, Stuart Michael. "Cortisol metabolism in vitro : biological and structural determinants." Thesis, University of Liverpool, 1993. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.357368.

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22

Loh, Vincent M. "Aminophosphinic acids : construction and biological evaluation." Thesis, University of Nottingham, 1997. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.243474.

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23

Mulqueen, Gerard C. "Siderphores : design, synthesis, and biological evaluation." Thesis, University of Nottingham, 1993. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.358061.

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24

Holmes, Jan L. "Development of functional in vitro toxicity tests." Thesis, Aston University, 1998. http://publications.aston.ac.uk/10976/.

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In vitro toxicity tests which detect evidence of the formation of reactive metabolites have previously relied upon cell death as a toxicity end point. Therefore these tests determine cytotoxicity in terms of quantitative changes in specified cell functions. In the studies involving the CaCO-2 cell model, there was no significant change in the transport of [3H] l-proJine by the cell after co-incubation with either dapsone or cyclophosphamide (50!!M) and rat liver microsomal metabolite generating system. The pre incubation of the cells with N-ethylmalemide to inhibit Phase II sulphotransferase activity, prior to the microsomal incubations, resulted in cytotoxcity in all incubation groups. Studies involving the L6 cell model showed that there was no significant effect in the cell signalling pathway producing the second messenger cAMP, after incubation with dapsone or cyclophosphamide (50!!M) and the rat microsomal metabolite generating system. There was also no significant affect on the vasopressin stimulated production of the second messenger IP3, after incubation with the hydroxylamine metabolite of dapsone, although there were some morphological changes observed with the cells at the highest concentration of dapsone hydroxylamine (1 OO!!M ) . With the test involving the NG11 S-401l-C3 cell model, there was no significant changes in DNA synthesis in terms of [3H] thymidine incorporation, after co-incubation with either phenytoin or cyclophosphamide (50!!M) and the rat microsomal metabolite generating system. In the one compartment erythrocyte studies, there were significant decreases in glutathione with cyclophosphamide (SO!!M) (0.44 + 0.04 mM), sulphamethoxazole (SOIlM) (0.43 + 0.08mM) and carbamazepine (SO!!M) (0.47 + 0.034 mM), when coincubated with the rat microsomal system, compared to the control (0.52 + 0.07mM). There was no significant depletion in glutathione when the erythrocytes were coincubated with phenytoin and the rat microsomal system. In the two compartment erythrocyte studies, there was a significant decrease in the erythrocyte glutathione with cyclophosphamide (50~lM) (0.953 + 011 OmM) when co-incubated the rat microsomal system, compared to the control (1.124 + 0.032mM). Differences were considered statistically significant for p
25

Samiullah, Ph D. "Synthesis, functionalisation and biological evaluation of tetrahydroxanthones." Thesis, University of Warwick, 2012. http://wrap.warwick.ac.uk/47038/.

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This thesis describes the development of new methods for the synthesis of mono-, diand trihydroxylated tetrahydroxanthones which are structural elements of a range of important natural products including the anti-cancer agents known as the kigamicins. In Chapter One, work on the isolation, biological significance and chemical synthesis of xanthones, dihydroxanthones, and tetrahydroxanthones is reviewed, with special focus on the polycyclic tetrahydroxanthone natural products. Chapter Two describes the development of methods for the synthesis of tetrahydroxanthones mimicking the ABC rings of kigamicin A which contain a hydroxyl group at C-3 of the saturated ring. A 5 step synthesis of 228 was achieved via palladium catalysed assembly of tetrahydroxanthone nucleus, followed by enantiocontrolled reduction of the C=O group via asymmetric transfer hydrogenation, and glycosidation using a novel trichloroacetimidate donor 225. In Chapter Three, a short route to the cis and trans1,4-diol functionality found in the tetrahydroxanthone fragment of 1,3,5-trihydroxy-8-β-D-glucopyranosyl, puniceaside B, puniceaside C, albofungin, and simaomicins is achieved. Excellent enantiocontrol (99% ee) was realised through use of an asymmetric ketone transfer hydrogenation. Subsequent enolate hydroxylation with the Davis oxaziridine facilitated installation of the second hydroxyl group albeit with low levels of diastereocontrol. The structure of cis-277 was verified by X-ray crystallography after conversion to the corresponding diacetate 279. Similar enolate hydroxylations were used to access the triol substitution patterns found in kibdelones and isokibdelones. Attempts to develop synthetic routes to the fully functionalised A-ring fragments of the actinoplanones and kigamicins are described. This culminated in the preparation of advanced synthetic intermediate 322 in 4 steps from hydroxyl selenide tetrahydroxanthone. In a key step in this sequence, an unusual syn-selective dihydroxylation of a PMB-protected homoallylic alcohol (321) was unearthed. Finally, the biological effects of the new dihydroxanthones, dihydroxy, and trihydroxytetrahydroxanthones synthesised in the laboratory were evaluated against human pancreatic cancer cell line (PANC-1), grown separately in nutrient rich medium (NRM) and nutrient deprived medium (NDM). In Chapter Four, detailed experimental and characterisation data for the new compounds are described.
26

Rached, Ouannassa. "Biological evaluation of aziridine-based SAM analogues." Thesis, University of Nottingham, 2010. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.546288.

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27

Lim, Ze-Yi. "Synthesis and biological evaluation of phosphoinositide analogues." Thesis, University of Cambridge, 2002. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.620205.

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28

Baloglu, Erkan. "Synthesis and Biological Evaluation of Paclitaxel Analogs." Diss., Virginia Tech, 2001. http://hdl.handle.net/10919/27853.

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The complex natural product paclitaxel (Taxol®), first isolated from Taxus brevifolia, is a member of a large family of taxane diterpenoids. Paclitaxel is extensively used for the treatment of solid tumors, particularly those of the breasts and ovaries. In order to obtain additional information about the mechanism of action of paclitaxel and the environment of the paclitaxel-binding site, several fluorescent analogs of paclitaxel were synthesized, and their biological activities have been evaluated. For the investigation of possible synergistic effects, concurrent modifications on selected positions have been performed and their biological evaluation were studied.
Ph. D.
29

Barney, Rocky James. "Synthesis and biological evaluation of novel phosphonates." Diss., University of Iowa, 2010. https://ir.uiowa.edu/etd/778.

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Phosphonates represent an important class of organophosphorus compounds. Their use as reagents in organic synthesis is prevalent, and there is a plethora of examples of biologically active compounds possessing the phosphonate moiety. To further our exploration of phosphonates as both reagents and biologically active compounds we have developed a one-flask protocol for the direct synthesis of phosphonates from benzylic and allylic alcohols. This transformation is unprecedented and is applicable to a range of substrates. Both electron rich and electron deficient benzylic alcohols react under the conditions developed. Furthermore, good yields are achieved when converting allylic alcohols to the corresponding allylic phosphonates. In at least one case, the one-flask protocol allows for phosphonate formation that was not achievable under the standard conditions. Bisphosphonates represent a significant subclass of phosphonates. Several nitrogenous bisphosphonates have found use in the clinic as treatments for bone-related disease including osteoporosis, and there is speculation that bisphosphonates that are enzyme-specific inhibitors may be used as cancer therapies. To develop our understanding of isoprenoid metabolism, we have prepared a range of bisphosphonates as potential inhibitors of geranylgeranyl pyrophosphate synthase. After much experimentation, an α-amino analog of a potent inhibitor of GGDPS has been synthesized and biological data is forthcoming. Furthermore, a new class of aromatic bisphosphonates, analogs of digeranyl bisphosphonic acid, has been synthesized and assayed. The bioassay results indicate that this series of compounds retains its specificity for the GGDPS enzyme, and that the dialkyl analogues retain much of their potency in the assays in spite of the increased steric bulk of the aromatic substructure. We have also begun the design and synthesis of compounds as potential inhibitors of Rab geranylgeranyl transferase (RGGTase). The lead compound, 3-PEHPC, is documented to inhibit RGGTase selectively, albeit at less than desirable concentrations. Using 3-PEHPC as the model compound we have elected to probe the impact of modifications on the hydrophilic "head" portion of the molecule. Using the phosphonophosphinate functionality as a surrogate for the phosphonocarboxylate moiety we have successfully synthesized digeranyl phosphonophosphinate. Initial assay data indicates that this novel phosphonophosphinate does not act upon GGDPS as does the analogous bisphosphonate substructure. The bioassay data to probe this compound's impact on RGGTase is forthcoming. Given the worldwide impact of tuberculosis infection and the emergence of drug-resistant strains of tuberculosis-causing pathogens, new and potent treatments for tuberculosis are necessary. We have engaged in the synthesis of several compounds as inhibitors of Rv2361c, an enzyme key to cell wall biosynthesis in Mycobacterium tuberculosis, the principle causative agent of tuberculosis in humans. To probe the impact of modifications at the C-9-position of the most potent of our Rv2361c inhibitors, we have made several analogues having phenyl and indole substituents. The in vitro enzyme assay data for the set of compounds has clarified understanding of the essential components of the pharmacophore, and helped to establish the direction for future efforts.
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Garside, John R. "Differential phase confocal microscopy of live biological samples in-vitro." Thesis, University of Nottingham, 1997. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.362893.

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31

Guermazi, Mahdi. "In-Vitro Biological Tissue State Monitoring based on Impedance Spectroscopy." Doctoral thesis, Universitätsverlag der Technischen Universität Chemnitz, 2016. https://monarch.qucosa.de/id/qucosa%3A20484.

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The relationship between post-mortem state and changes of biological tissue impedance has been investigated to serve as a basis for developing an in-vitro measurement method for monitoring the freshness of meat. The main challenges thereby are the reproducible measurement of the impedance of biological tissues and the classification method of their type and state. In order to realize reproducible tissue bio-impedance measurements, a suitable sensor taking into account the anisotropy of the biological tissue has been developed. It consists of cylindrical penetrating multi electrodes realizing good contacts between electrodes and the tissue. Experimental measurements have been carried out with different tissues and for a long period of time in order to monitor the state degradation with time. Measured results have been evaluated by means of the modified Fricke-Cole-Cole model. Results are reproducible and correspond to the expected behavior due to aging. An appropriate method for feature extraction and classification has been proposed using model parameters as features as input for classification using neural networks and fuzzy logic. A Multilayer Perceptron neural network (MLP) has been proposed for muscle type computing and the age computing and respectively freshness state of the meat. The designed neural network is able to generalize and to correctly classify new testing data with a high performance index of recognition. It reaches successful results of test equal to 100% for 972 created inputs for each muscle. An investigation of the influence of noise on the classification algorithm shows, that the MLP neural network has the ability to correctly classify the noisy testing inputs especially when the parameter noise is less than 0.6%. The success of classification is 100% for the muscles Longissimus Dorsi (LD) of beef, Semi-Membraneous (SM) of beef and Longissimus Dorsi (LD) of veal and 92.3% for the muscle Rectus Abdominis (RA) of veal. Fuzzy logic provides a successful alternative for easy classification. Using the Gaussian membership functions for the muscle type detection and trapezoidal member function for the classifiers related to the freshness detection, fuzzy logic realized an easy method of classification and generalizes correctly the inputs to the corresponding classes with a high level of recognition equal to 100% for meat type detection and with high accuracy for freshness computing equal to 84.62% for the muscle LD beef, 92.31 % for the muscle RA beef, 100 % for the muscle SM veal and 61.54% for the muscle LD veal.
Auf der Basis von Impedanzspektroskopie wurde ein neuartiges in-vitro-Messverfahren zur Überwachung der Frische von biologischem Gewebe entwickelt. Die wichtigsten Herausforderungen stellen dabei die Reproduzierbarkeit der Impedanzmessung und die Klassifizierung der Gewebeart sowie dessen Zustands dar. Für die Reproduzierbarkeit von Impedanzmessungen an biologischen Geweben, wurde ein zylindrischer Multielektrodensensor realisiert, der die 2D-Anisotropie des Gewebes berücksichtigt und einen guten Kontakt zum Gewebe realisiert. Experimentelle Untersuchungen wurden an verschiedenen Geweben über einen längeren Zeitraum durchgeführt und mittels eines modifizierten Fricke-Cole-Cole-Modells analysiert. Die Ergebnisse sind reproduzierbar und entsprechen dem physikalisch-basierten erwarteten Verhalten. Als Merkmale für die Klassifikation wurden die Modellparameter genutzt.
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Guermazi, Mahdi. "In-Vitro Biological Tissue State Monitoring based on Impedance Spectroscopy." Doctoral thesis, Universitätsbibliothek Chemnitz, 2017. http://nbn-resolving.de/urn:nbn:de:bsz:ch1-qucosa-206710.

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The relationship between post-mortem state and changes of biological tissue impedance has been investigated to serve as a basis for developing an in-vitro measurement method for monitoring the freshness of meat. The main challenges thereby are the reproducible measurement of the impedance of biological tissues and the classification method of their type and state. In order to realize reproducible tissue bio-impedance measurements, a suitable sensor taking into account the anisotropy of the biological tissue has been developed. It consists of cylindrical penetrating multi electrodes realizing good contacts between electrodes and the tissue. Experimental measurements have been carried out with different tissues and for a long period of time in order to monitor the state degradation with time. Measured results have been evaluated by means of the modified Fricke-Cole-Cole model. Results are reproducible and correspond to the expected behavior due to aging. An appropriate method for feature extraction and classification has been proposed using model parameters as features as input for classification using neural networks and fuzzy logic. A Multilayer Perceptron neural network (MLP) has been proposed for muscle type computing and the age computing and respectively freshness state of the meat. The designed neural network is able to generalize and to correctly classify new testing data with a high performance index of recognition. It reaches successful results of test equal to 100% for 972 created inputs for each muscle. An investigation of the influence of noise on the classification algorithm shows, that the MLP neural network has the ability to correctly classify the noisy testing inputs especially when the parameter noise is less than 0.6%. The success of classification is 100% for the muscles Longissimus Dorsi (LD) of beef, Semi-Membraneous (SM) of beef and Longissimus Dorsi (LD) of veal and 92.3% for the muscle Rectus Abdominis (RA) of veal. Fuzzy logic provides a successful alternative for easy classification. Using the Gaussian membership functions for the muscle type detection and trapezoidal member function for the classifiers related to the freshness detection, fuzzy logic realized an easy method of classification and generalizes correctly the inputs to the corresponding classes with a high level of recognition equal to 100% for meat type detection and with high accuracy for freshness computing equal to 84.62% for the muscle LD beef, 92.31 % for the muscle RA beef, 100 % for the muscle SM veal and 61.54% for the muscle LD veal
Auf der Basis von Impedanzspektroskopie wurde ein neuartiges in-vitro-Messverfahren zur Überwachung der Frische von biologischem Gewebe entwickelt. Die wichtigsten Herausforderungen stellen dabei die Reproduzierbarkeit der Impedanzmessung und die Klassifizierung der Gewebeart sowie dessen Zustands dar. Für die Reproduzierbarkeit von Impedanzmessungen an biologischen Geweben, wurde ein zylindrischer Multielektrodensensor realisiert, der die 2D-Anisotropie des Gewebes berücksichtigt und einen guten Kontakt zum Gewebe realisiert. Experimentelle Untersuchungen wurden an verschiedenen Geweben über einen längeren Zeitraum durchgeführt und mittels eines modifizierten Fricke-Cole-Cole-Modells analysiert. Die Ergebnisse sind reproduzierbar und entsprechen dem physikalisch-basierten erwarteten Verhalten. Als Merkmale für die Klassifikation wurden die Modellparameter genutzt
33

Purdon, Carryn Hamilton. "In vitro passage of ibuprofen through synthetic and biological membranes." Thesis, Rhodes University, 2001. http://hdl.handle.net/10962/d1003264.

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Ibuprofen is a non-steroidal anti-inflammatory drug with three major types of effect: anti-inflammatory, analgesic and antipyretic. Ibuprofen may be administered in a number of different forms via the oral as well as the topical route. Published evidence suggests that topical, unlike oral, non-steroidal anti-inflammatory drugs are associated with few systemic side effects as plasma concentrations are low compared to oral therapy. In some countries it is particularly difficult to obtain human skin for in vitro experimentation and it is therefore important to have alternate biological or synthetic membranes which mimic human skin for diffusion experiments. Synthetic membranes serve as predictive models for topical drug release and in South Africa, shed snake skin is easily obtainable from the many snake parks present in the country. The FDA guidelines were considered when choosing the apparatus to be used in the comparative diffusion study on proprietary ibuprofen-containing topical preparations from three countries and the verification of the usefulness, or otherwise, of shed snake skin as a biological membrane for the assessment of the permeation of ibuprofen. Two diffusion techniques were considered appropriate for the measurement of the amount of ibuprofen released from a topical formulation during in vitro testing. One was the Franz diffusion cell, as modified by Keshary and Chien (88,169) and the other was the European Pharmacopoeia diffusion cell (187). High performance liquid chromatography was used as the analytical technique for the analysis of ibuprofen in aqueous solution using ultraviolet detection at 222 nm. The validated method was applied to the determination of the diffusion of ibuprofen from topical ibuprofen-containing formulations (gels, creams and mousse) through synthetic silicone membrane and shed snake skin biological membrane from four different species. In a study of fifteen topical ibuprofen-containing formulations (gels, creams and mousse) from three countries (South Africa, United Kingdom and France) it was found that there was a trend of products from two countries consistently exhibiting superior diffusion characteristics as well as products from the same two countries consistently exhibiting the lowest diffusion of ibuprofen. Interpretation of the results of these studies demonstrated the importance of employing a combination of statistical analyses and peak integration values when drawing conclusions regarding comparative diffusion characteristics. Shed snake skin has been described as a 'model' membrane, i.e. a membrane which shows similar permeability to human stratum corneum. The results reported here show clearly that, for ibuprofen, the four species of snake produce shed skin with completely different diffusion characteristics when all other conditions are identical. It may well be that there is one particular species of snake which produces shed skin of identical permeability to human stratum corneum, but to describe shed snake skin in general as a model membrane seems incorrect. It is therefore important that if shed snake skin is used as a membrane, the species, skin site and orientation should be reported. The European Pharmacopoeia diffusion apparatus was judged to be the better of the two diffusion techniques assessed for the measurement of the amount of ibuprofen released from a topical formulation during in vitro testing using silicone membranes and for the measurement of the amount of ibuprofen diffusing across the ventral outside orientation of shed skin during in vitro testing, whereas the Franz diffusion apparatus was judged to be better for the measurement of the amount of ibuprofen diffusing across the dorsal outside orientation of shed skin during in vitro testing. However, the choice of this diffusion apparatus must be weighed against the relatively poor reproducibility as compared with the European Pharmacopoeia diffusion apparatus.
34

MOSCHINI, ELISA. "Nanoparticles: biological effects on in vitro and in vivo systems." Doctoral thesis, Università degli Studi di Milano-Bicocca, 2012. http://hdl.handle.net/10281/29889.

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The advent of nanotechnology and the commercialization of several nanoparticle-containing products call to a serious assessment of the environmental and human risks derived from the exposure to these new materials. The emerging properties, the increasing world market and the several exposure scenarios are some of the main criticisms related to distribution of these products. Among nanomaterials metal oxides nanoparticles are considered at the same time an interesting and critical group; in particular titanium dioxide, zinc oxide and cupric oxide (nTiO2, nZnO, nCuO) have received particular attention due to their unique physical and chemical properties and their environmental and economical relevance. Previous studies focused on toxicity of these materials highlighted different adverse effects on the biological systems exposed but there is still a lack of information about the mechanisms involved. These research aims to evaluate the potential biological effects of these commercial transition metal nanoxides on two different experimental models: an in vivo model and an in vitro one. The in vivo model has been used to assess the aquatic toxicity, which has been evaluated by the use of the FETAX assay (Frog embryo teratogenesis assay - Xenopus), a sensitive test commonly used to investigate the embryotoxic effects induced by chemicals. After a preliminary physico-chemical characterization, nTiO2, nZnO, nCuO were administered to Xenopus embryos as suspensions in FETAX medium; at the end of the test the main end points of growth retardation, mortality, absolute and relative frequency of malformations have been analysed. In parallel, different microscopic techniques were used to better characterise the effects observed and to localise the particles inside the organisms. Our results revealed that even high NP concentrations (up to 500 mg/ml) were not lethal for such NPs with the exception of nCuO but all NPs induced relevant malformations. Exposure to titanium dioxide did produce only slight embryotoxic effects, but these NPs were able to penetrate inside the embryo tissues and translocate throughout the body. The intestine appeared to be the main target of nZnO: it induced severe histological alterations of the gut epithelium and over passed the intestinal barrier. These effects were not observed in embryo exposed to soluble Zn, confirming the key role played by nanoparticles themselves. Preliminary results regarding the potential mechanisms involved in toxicity of nZnO indicate lipid peroxidation and alteration of cell junctions as mainly causes of epithelial lesions and NP paracellular translocation. The human alveolar epithelial cell line A459 has been used as in vitro model to assess the potential toxicity related to human inhalation of MONs. The nanotoxicological study has been approached with the aim to define a correlation between the biochemical analyses and the morphological evidences, to better characterize the phenomena at the nano-level. Thus a comparative study on the cytotoxicity and cell-particle interactions of nTiO2 and nCuO was performed. Then we focused the attention on nCuO in order to investigate sensitive cellular targets and the potential mechanisms involved in nCuO toxicity. Ion dissolution, oxidative stress, mitochondrial and lysosomal perturbation and cell cycle alterations were analysed as potential causes of the cytotoxic effects observed. Our study demonstrates that the different effects promoted by MONs on A549 cells depend on the chemical composition, aggregation state, particle dissolution and surface reactivity. Large nTiO2 particles or aggregates were easily internalised by cells trough the endocytic process. They distributed at different level but they didn’t induce structural alterations even at 24 hours of exposure, despite their massive uptake. At this time, the plasma membrane appeared as the major target structure, even cytotoxicity was not significant. nCuO resulted to be a very toxic compound and a dose- and time- dependent effects were observed. Surface reactivity and copper release from particles differently contributed to the registered cytotoxicity. After few hours of exposure, particles themselves were responsible for significant alterations such as increase in reactive oxygen species, formation of lipid peroxidation products and ultrastructural damages at the mitochondria and plasma membrane. A prolonged exposure, instead, allows particles to dissolve in the extra and intracellular milieu. Extracellular release of Cu from particles contributed for the significant decrease in cell viability observed after 24h. At the same time point the intracellular dissolution of copper ions induced high levels of lipid peroxidation and was responsible for significant ultrastructural alterations. In conclusion this study contributed to improve the current knowledge of the (eco)toxicological profile of three widely used MONs: nTiO2, nCuO, nZnO; in particular, in both the models investigated, the key role played by particle themselves was highlighted. Nevertheless, due to the complexity of intrinsic variables and the plurality of potential interactions between MONs and the biological systems, harmonised protocols for testing toxicity of nanoparticles should be adopted and interlaboratory comparisons of results are suggested in order to define adequate guidelines for toxicity studies and to harmonise the production of new and safe materials.
35

Hills, Daniel Richard. "In vitro characterisation of biological activity of novel nitric oxide donor compounds." Thesis, Kingston University, 2017. http://eprints.kingston.ac.uk/40673/.

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Nitric oxide (NO), being a free radical, has a unique biological chemistry that, since its elucidation as a signaling molecule in the cardiovascular system, has been implicated in a range of diverse biological functions. Both cardiovascular disease, exacerbated by hypertension, and antibiotic-resistant bacterial infections are major yet unavoidable public health concerns. Atypical NO synthesis may be a factor these pathologies and exogenous NO may provide an alternative therapeutic strategy when endogenous NO synthesis is atypically low. Furoxans are an old, yet largely untapped resource of nitric oxide donor compounds. A panel of twelve such compounds were developed through heterocyclic synthetic chemistry and assessed for their potential biological activity. The compounds have had their NO release characterised via the Griess assay and have been investigated for both novel antibacterial and vasodilatory effects. Direct toxicity was explored using an optimised MTT assay to assess cell viability post incubation in three bacterial species: Staphylococcus epidermis, Escherichia coli, and Pseudomonas aeruginosa. The lead compound RJP06A was then exposed to bacterial biofilms, investigating its ability to prevent initial biofilm formation and promote its dispersal before determining its mechanism. Vasodilatory potential of the compounds was studied using rat thoracic aorta, pulmonary artery and renal artery. Results demonstrate that these compounds elicit a toxic effect against all three bacterial species with IC50 values ranging from 31-745 uM, which was enhanced in the presence of S-nitrosoglutathione, despite having negligible toxicity itself. Biofilm investigations of RJP06A demonstrate its ability to disperse mature single-species bacterial biofilms in a dose-dependent manner. Isometric tension data show that three quarters of the compounds produced strong, sustained relaxation of contracted aorta, and two in particular caused almost complete reversal of contraction at concentrations of 250 and 350 nM respectively. Mechanism studies suggest that the lead furoxan, RJP06A exerts its effects primarily through a cGMP-mediated NO-activated pathway, but may also have a small component whereby thiols can bypass this step and activate calcium channels directly. RJP06A has been shown to be better at inducing relaxation of resistance vessels, such as aorta, rather than pulmonary or renal artery. In both investigations, nitric oxide from RJP06A appears to be the key molecule involved in the observed effects, with scavenging evolved NO using haemoglobin attenuating its effect, and importantly the two mechanisms identified in very different models imply an evolutionarily conserved pathway of nitric oxide biology.
36

Patel, Ramila. "Delivery and stability of antisense oligonucleotide conjugates in vitro." Thesis, Aston University, 1998. http://publications.aston.ac.uk/10983/.

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The aim of this project was to study the delivery of ODNs to macrophages and to assess the stability of two ODN conjugates, in vitro. The first conjugate aimed to improve uptake of ODNs via mannose receptor mediated delivery, the second investigated the improved delivery of ODN conjugates via non-specific lipophilic interaction with the cell membrane. A mono-mannose phosphoramidite derivative was designed and synthesised and a mono-mannose ODN conjugate synthesised by standard phosphoramidite chemistry. Delivery of this conjugate was enhanced to RAW264.7 and J774 macrophage cell lines via a mechanism of receptor mediated endocytosis. The delivery of three lipophilic ODN conjugates, cholesterol (cholhex), 16-carbon alkyl chain (C16) and hexa-ethylene glycol (HEG) moieties and an unconjugated ODN were assessed in RAW264.7 macrophages. All three conjugates increased the lipophilicity of the ODN as assessed from partition coefficient data. Both the cholhex and unconjugated ODNs were found to have higher degrees of cellular association than the C16 and HEG conjugates. Cellular uptake studies implicated internalisation of these ODNs by an adsorptive endocytosis mechanism. Following endocytosis, ODNs must remain stable during their residence in endosomal/lysosomal compartments prior to exiting and exerting their biological action in either the cytosol or nucleus. Assessment of in vitro stability in a lysosomal extract revealed the cholhex conjugate and unconjugated ODNs to have a longer half-life than the C16 and HEG conjugated ODNs, highlighting the influence of conjugate moieties on lysosomal stability. The effects of base composition and length on stability in a lysosomal extract revealed the longest half-life for homo-cytidine ODNs and ODNs over 20 nucleotides in length. These studies suggest that the above conjugates can enhance cellular association and delivery of antisense ODNs to cultured macrophages. This may lead to their use in treating disorders such as HIV infection, which affects this cell type.
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Wu, Lianpao. "Synthesis and Biological Evaluation of New Tetrahydrobenzothiophene Derivatives." Thesis, Umeå universitet, Kemiska institutionen, 2012. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-60470.

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38

Kashiwazaki, Gengo. "Design and Biological Evaluation of PI Polyamide Conjugates." 京都大学 (Kyoto University), 2012. http://hdl.handle.net/2433/157796.

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39

Mendoza, Sánchez Rodrigo. "Design, synthesis, and biological evaluation of novel antiestrogens." Thesis, McGill University, 2013. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=117025.

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Breast cancer is the most common form of cancer in women in the Western world and the second most fatal after lung cancer. Estrogens play a crucial role in normal breast development, but also contribute to mammary tumorigenesis. Estrogen signaling is mediated by intracellular estrogen receptors (ERα and ERβ), with ERα being a common target in breast cancer therapeutics. Two classes of competitive estrogen inhibitors have been investigated and proved to be useful for breast cancer treatment: full antiestrogens (FAE's) and selective estrogen receptor modulators (SERM's). A novel platform, FORECASTER, was developed in the Moitessier laboratory with the aim of integrating computational, medicinal and combinatorial chemistry. The successful validation of FORECASTER as a computer-aided drug design platform is described. In our quest for potent SERMs, this platform was used to build virtual combinatorial libraries and to filter and extract a highly diverse library from the NCI database. The virtual screening of a diverse library seeded with known active compounds followed by a search for analogs yielded a high enrichment factor. Moreover, the virtual screening of a designed virtual combinatorial library that included known actives resulted in a highly discriminative process. The laboratory of Dr. Sylvie Mader at University of Montreal showed that only FAE's induce a strong and fast SUMOylation of ERα in a variety of cell lines, strongly suggesting that SUMOylation is a general property related to full antiestrogenicity. A collaboration between the Gleason and Mader laboratories resulted in an SAR study of ERα ligands with different side chain lengths that revealed a specific side chain length of 15 to 19 atoms was necessary to differentiate SERM's from FAE's through the induction of SUMOylation. Histone deacetylase inhibitors (HDACi's) have emerged as a new and growing class of anticancer agents. Recent findings have shown that co-treatment of SERM's or FAE's with HDACi's can significantly decrease the growth of breast cancer cells. Inspired by the success of the vitamin D/HDACi hybrids developed within our group, and taking advantage of structural features of both kinds of molecules, we developed a new family of antiestrogen/HDACi hybrids. A first generation set of hybrids were designed by replacing the tertiary amide of FAE ICI-164,384 with three different zinc binding groups: hydroxamic acid, o-aminoanilide and N-butylhydroxamate. Both the hydroxamic acid and the o-aminoanilide hybrids displayed both antiestrogenic and HDAC inhibitory activities whereas N-butylhydroxamate hybrid displayed antiestrogenic activity but a poor HDAC inhibition profile. All hybrids inhibited MCF-7 cell proliferation and validated the proof of concept regarding the formation of this class of hybrids. However, none of the hybrids showed an improved profile compared to known antiestrogens or HDACi's. A second generation set of hybrids exploiting the same zinc binding groups with SERM- and FAE-like side chains were developed in an effort to balance the activity of our hybrids. Hydroxamic acids showed a consistent inhibition of HDAC's while displaying poor antiestrogenic activity in most cases. Ortho-amino anilides showed modest HDAC inhibition activity and only aliphatic-based o-amino-anilides behaved as antiestrogens. N-Butyl-hydroxamates showed a reduced potency to inhibit HDAC's compared to their hydroxamic acid counterparts but retained antiestrogenic behaviour. Overall, our second-generation hybrids did not show equal or improved HDAC inhibition and antiestrogenic activities relative to known antiestrogens and HDACi's.
Le cancer du sein est la forme la plus courante de cancer chez les femmes en Occident et la deuxième plus mortelle après le cancer du poumon. Les œstrogènes jouent un rôle crucial dans le développement mammaire normal, mais aussi contribuent à la tumorigénèse mammaire. La signalisation des œstrogènes est permise grâce à des récepteurs d'œstrogènes (ERα et ERβ), avec ERα étant une cible courante dans la recherche thérapeutique du cancer du sein. Deux classes d'inhibiteurs compétitifs d'œstrogène ont été étudiées. Certains se sont révélés utiles pour le traitement du cancer du sein dont les anti-œstrogènes complets (FEA) et les modulateurs sélectifs des récepteurs d'œstrogènes (SERM). Une nouvelle plate-forme, FORECASTER, a été développée dans le laboratoire Moitessier dans le but d'intégrer la chimie computationnelle, médicinale et combinatoire. La validation réussie de FORECASTER comme plate-forme pour la conception assistée par ordinateur de médicaments est décrite. Dans notre quête pour la découverte de SERM puissants, cette plate-forme a été utilisée pour construire des bibliothèques combinatoires virtuelles et pour filtrer et extraire de la base de données NCI une bibliothèque de composés très diversifiée. Un facteur d'enrichissement élevé a été obtenu par le criblage virtuel d'une bibliothèque diversifiée et ensemencée avec des molécules actives connues suivi d'une recherche d'analogues.Le laboratoire du Dr Sylvie Mader à l'Université de Montréal a montré que seulement les FAE provoquent une SUMOylation forte et rapide des ERα dans une variété de lignées cellulaires, suggérant fortement que la SUMOylation est une propriété générale liée à antiestrogénicité complète. Une collaboration entre les laboratoires Gleason et Mader est à la base d'une étude de relations structure-activité de ligands ERα de différentes longueurs de chaînes latérales qui a révélé qu'une longueur de chaîne latérale spécifique de 15 à 19 atomes était nécessaire pour différencier les SERM des FAE à travers l'induction de la SUMOylation. Les inhibiteurs de l'histone déacétylase (HDACi) ont émergé comme une nouvelle et croissante classe d'agents anticancéreux. Des découvertes récentes ont montré que le co-traitement utilisant des SERM ou des FAE avec des HDACi peut réduire de façon significative la croissance des cellules cancéreuses du sein. Inspirés par le succès des hybrides vitamine D - HDACi développés au sein de notre groupe, et profitant des caractéristiques structurelles des deux types de molécules, nous avons développé une nouvelle famille d'hybrides antiestrogènes - HDACi. Un ensemble d'hybrides de première génération ont été conçus par remplacement de l'amide tertiaire des FAE ICI-164,384 avec trois différents groupes capables de se lier au zinc : le groupe acide hydroxamique, le groupe o-aminoanilide et le groupe N-butylhydroxamate. Les hybrides acide hydroxamique et o-aminoanilide ont montré à la fois des activités anti-œstrogénique et inhibitrices des HDAC, alors que l'hybride N-butylhydroxamate a affiché une activité anti-œstrogénique mais une piètre inhibition des HDAC. Tous les hybrides ont inhibé la prolifération des cellules MCF-7 et ont ainsi validé l'hypothèse en ce qui concerne la formation de cette classe d'hybrides. Un ensemble d'hybrides de deuxième génération exploitant les mêmes groupes se liant au zinc, mais avec des chaînes latérales ressemblant à celles des SERM et des FAE, ont été développé. Les acides hydroxamiques ont montré une inhibition importante de la HDAC tout en étant de mauvais anti-oestrogènes dans la plupart des cas. Les hybrides o-aminoanilide montré une modeste activité inhibitoire des HDAC et seulement les o-aminoanilides aliphatiques se sont comportés comme des anti-œstrogènes. Les hydrides N-butylhydroxamates ont montré une activité d'inhibition des HDAC réduite comparée à celle de leurs homologues d'acides hydroxamiques, mais ont conservé un comportement anti-œstrogénique.
40

Stewart, Lee Robert. "The synthesis and biological evaluation of 4-azafluorenones." Thesis, University of Strathclyde, 2000. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.366936.

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41

MENES, ALEJANDRO MUSTELIER. "QUALITY EVALUATION FOR FRAGMENTS ASSEMBLY OF BIOLOGICAL SEQUENCES." PONTIFÍCIA UNIVERSIDADE CATÓLICA DO RIO DE JANEIRO, 2017. http://www.maxwell.vrac.puc-rio.br/Busca_etds.php?strSecao=resultado&nrSeq=33967@1.

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PONTIFÍCIA UNIVERSIDADE CATÓLICA DO RIO DE JANEIRO
COORDENAÇÃO DE APERFEIÇOAMENTO DO PESSOAL DE ENSINO SUPERIOR
PROGRAMA DE EXCELENCIA ACADEMICA
Nos últimos anos surgiram novas tecnologias de sequenciamento de DNA conhecidas como NGS - Next-Generation Sequencing. Estas são responsáveis por tornar o processo de sequenciamento mais rápido e menos custoso, mas também trazem como resultado fragmentos de DNA muito pequenos, conhecidos como reads. A montagem do genoma a partir destes fragmentos é considerada um problema complexo devido à sua natureza combinatória e ao grande volume de reads produzidos. De maneira geral, os biólogos e bioinformatas escolhem o programa montador de sequências sem levar em consideração informações da eficiência computacional ou da qualidade biológica do resultado. Esta pesquisa tem como objetivo auxiliar aos usuários biólogos a avaliar a qualidade dos resultados da montagem. Primeiramente, foi projetada e desenvolvida uma metodologia para obter informações dos genes presentes na montagem, listando os genes que podem ser identificados, aqueles que têm o tamanho correto e a sequência de pares de bases correta. Em segundo lugar, foram realizados testes experimentais exaustivos envolvendo cinco dos principais montadores de genoma conhecidos na literatura os quais são baseados no uso de grafos de Bruijn e oito genomas de bactérias. Foram feitas comparações estatísticas do resultado usando as ferramentas QUAST e REAPR. Também foram obtidas informações qualitativas dos genes usando o algoritmo proposto e algumas métricas de eficiência. Em função dos resultados coletados, é feita uma análise comparativa que permite aos usuários conhecer melhor o comportamento das ferramentas consideradas nos testes. Por fim, foi desenvolvida uma ferramenta que recebe diferentes resultados de montagens de um mesmo genoma e produz um relatório qualitativo e quantitativo para o usuário interpretar os resultados de maneira integrada.
New DNA sequencing technologies, known as NGS - Next-Generation Sequencing, are responsible for making the sequencing process more efficient. However, they generate a result with very small DNA fragments, known as reads. We consider the genome assembly from these fragments a complex problem due to its combinatorial nature and the large volume of reads produced. In general, biologists and bioinformatics experts choose the sequence assembler program with no regard to the computational efficiency or even the quality of the biological result information. This research aims to assist users in the interpretation of assembly results, including effectiveness and efficiency. In addition, this may sometimes increase the quality of the results obtained. Firstly, we propose an algorithm to obtain information about the genes present in the result assembly. We enumerate the identified genes, those that have the correct size and the correct base pair sequence. Next, exhaustive experimental tests involving five of the main genome assemblers in the literature which are based on the use of graphs of Bruijn and eight bacterial genomes data set were ran. We have performed statistical comparisons of results using QUAST and REAPR tools. We have also obtained qualitative information for the genes using the proposed algorithm and some computational efficiency metrics. Based on the collected results, we present a comparative analysis that allows users to understand further the behavior of the tools considered in the tests. Finally, we propose a tool that receives different assemblies of the same genome and produces a qualitative and quantitative report for the user, enabling the interpretation of the results in an integrated way.
42

Baashen, Mohammed Abdulwahhab M. "Synthesis, analysis and biological evaluation of heterocyclic drugs." Thesis, University of Sussex, 2013. http://sro.sussex.ac.uk/id/eprint/45267/.

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Chapter 1: Chapter One provides an overview on the Bohlmann-Rahtz pyridine synthesis. New procedures, implementing metal based Lewis acids, Brønsted acids and metal-free Lewis acid catalysts have been used in this process. Also, new one-pot two- and three-component methodologies have been developed for the synthesis of various natural products containing the pyridine motif and these have been compared and contrasted. This chapter also discusses signalling pathways in Werner syndrome cells. The inhibitor SB203580 has been shown to prevent the phosphorylation of the p38α kinase in a ATP competitive manner and this implicates this mechanism in accelerated ageing and gives potential to the prospect of targeting this pathway in a drug discovery programme, if better mechanistic understanding can be garnered. Chapter 2: Chapter Two discusses the Bohlman–Rahtz synthesis of various substituted pyridines. The process has been modified to be simple, involves mild conditions and provides the heterocyclic targets in high yield. We have shown that substituted pyridines could be synthesised efficiently under microwave conditions using a relatively short reaction time. The process was also successful for the production of a range of fused heterocycles containing the pyridine moiety in high yield, including pyrido[2,3-d]pyrimidin-4(3H)-ones and pyrido[2,3-d]pyrimidine-2,4(1H,3H)-diones. Chapter 3: Chapter Three describes the efficient synthesis of the p38 MAPK inhibitor UR-13756 using a Hantzsch-type three component cyclocondensation. Microwave irradiation of a mixture of 3-amino-1-methylpyrazole hydrochloride, 1-(4-fluorophenyl)-2-(pyridine-4-yl)ethanone and 4-fluorobenzaldhyde for 4 hours in ethanol under acidic catalytic conditions provided UR-13756 in high yield (71%) after purification by column chromatography. Chapter 4: Chapter Four shows the synthesis of 4-(3-amino-1-(4-methoxyphenyl)-1H-pyrazol-4-yl)benzamide in three steps by the use of rigorous experimental procedures under microwave conditions. This technique led to faster heating rates and allowed the rapid optimization of yields. These advantages were observed in all steps and allow formation of products in high yields. Biological study of the inhibitor 4-(3-amino-1-(4-methoxyphenyl)-1H-pyrazol-4-yl)benzamide showed, by ELISA analysis, that p38a signalling was inhibited in control dermal cells. Some progress was made towards the synthesis of 3-amino-4-[1-(3-1H-pyrazol-4-yl)]benzamide. Chapter 5: Chapter Five investigates the synthesis of the chemotherapeutic agent RO3201195, a highly selective inhibitor of p38α, in seven steps under microwave conditions. The procedure provides a relatively high overall yield of the desired product and all other intermediates involved in individual steps compared with conventional heating methods. Chapter 6: Chapter Six provides the experimental procedures and various spectroscopic data for the synthesized compounds.
43

Griffiths, Natalie Jane. "Design, synthesis and biological evaluation of narciclasine analogues." Thesis, University of Bath, 2015. https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.687347.

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Whilst the cultivation of the Amaryllidaceae genus has primarily been for their ornamental properties, their use in traditional medicine is also well documented. Although over 100 alkaloids from this genus have been isolated, the phenanthridinone analogues narciclasine and pancratistatin isolated from the daffodil bulb, are particularly interesting due to their cytostatic and cytotoxic properties. They have potent and selective anticancer activity which is seemingly unique when compared to currently available chemotherapeutic agents. However, they have yet to be fully exploited as therapeutic agents due to their complex total synthesis and scarce availability from natural sources. The work described herein demonstrates short synthetic sequences which have been developed to gain simple analogues of these natural products. These have been assessed by MTS cell proliferation assays in order to gain more understanding of the SARs of narciclasine and pancratistatin, which in turn will be used to design additional biologically active compounds. These natural products share a dihydroisoquinolinone core and a series of AB-ring analogues were synthesised using a one-pot procedure previously developed and published by the group. Analogues were tested for anticancer activity by MTS cell proliferation assays against HT29 colon cancer cell line. Although these analogues were not biologically active their isoquinolinone counterparts showed a marked improvement with IC50 values below 300 μM. Functionalisation to simulate the C-ring of the natural products had limited success. Allylation gave analogues with IC50 values below 250 μM, however attempts at subsequent dihydroxylation proved to be capricious. Acetylation at the benzylic position showed some potential with the most promising compound having an IC50 value of 33 μM. Upon N-methylation of the acetylated lactam some activity was lost with the IC50 value increasing to 110 μM. Optimisation of preliminary investigations was undertaken in order to synthesise late stage ABCring analogues using Robinson annulation, Curtius rearrangement and Friedel-Craft acylation as key reaction steps. A novel methylenedioxy analogue was synthesised and further functionalisation was briefly explored with very limited success. Preliminary in-house MTS cell proliferation assays against the HT29 cells showed promising biological activity with IC50 values ranging from 9 to 50 μM. These selected analogues were sent to the NCI for further analysis. In order to improve the water solubility of the natural product a quinazolinone AB-ring core was incorporated to generate late stage tricyclic analogues with a basic nitrogen. This utilised a onestep synthesis from anthranilamide and glutaraldehyde starting materials. Unfortunately these compounds were found to be unstable and further functionalisation was problematic due to decomposition of the tricyclic compounds. C-ring analogues were also examined which were derived from sugars such as L- and D-lyxose, furnishing hydroxylated derivatives with known absolute and relative stereochemistry.
44

Aguiar, Gisele Rocha. "Chemical and biological evaluation of propolis of Alagoas." Universidade Federal do CearÃ, 2015. http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=15888.

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The red propolis originally from the state of Alagoas has a chemical composition rich in isoflavones and has been used as traditional popular medicine presented as an antioxidant and antiviral properties. Its relevance to this study is mainly due to the same present several biological properties, among them: antimicrobial, anti-cancer, cytotoxic and anti-tumor. In this work it was performed the study of the fixed compounds present in hexane fraction of propolis, which presented three esters: the methyl hexadecanoate (15,20%), the methyl tetracosanoate (10,40%) and the methyl octadecanoate (2,39%). Four isoflavanes were isolated from the thanolic extract (2'-hydroxy-4',7-dimethoxyisoflavane [PV-1], 2',7-dihydroxy-4'-methoxyisoflavane [PV-3],4',7-dihydroxy-2'-methoxyisoflavane [PV-4] and 2',4'-ihydroxy-7-methoxyisoflavane [PV-5]), one chalcone (2',4 ',4-trihydroxychalcone [PV-6]) and a triterpene (lup-20(29)-en-3-ol [PV-2]), known in red propolis. The structural determination of substances were performed by spectroscopic methods IR, 1H NMR, 13C-BB NMR,13C NMR DEPT-135Â, COSY, HSQC, HMBC and GC-MS. It was performed the determination of total phenols, using a spectrophotometer, in the ethanolic extract (EEPV), which presented a phenolic content of 133.3 Â 4.35 mg GAE / g sample, a result lower than those reported in the literature. Another test was performed on the antioxidant activity, the scavenging method using DPPH radical, both ethanolic extract and the hexane, dichloromethane, ethyl acetate and metanol fractions, with satisfactory results and higher than standart Vitamin C. Besides the antioxidant test, if was performed the inhibition of acetylcholinesterase assay by colorimetric method, of the ethanolic extract and hexane, dichloromethane, ethyl acetate and metanol fractions, that yielded positive results in almost all, regarding standart Eserine salt.
A prÃpolis vermelha oriunda do Estado de Alagoas possui uma composiÃÃo quÃmica rica em isoflavonoides e tem sido usada como remÃdio tradicional na medicina popular por apresentar propriedades antioxidante e antiviral. Sua relevÃncia decorre, principalmente, por apresentar diversas propriedades biolÃgicas, dentre elas: antimicrobiana, anti-cancerÃgena, citotÃxica e antitumoral. Neste trabalho foi realizado o estudo dos compostos fixos presentes na fraÃÃo hexÃnica da prÃpolis, o qual apresentou trÃs Ãsteres: o hexadecanoato de metila (15,20%), o tetracosanoato de metila (10,40%) e o octadecanoato de metila (2,39%). Foram isoladas do extrato etanÃlico quatro isoflavanas (2â-hidroxi-4â,7-dimetoxiisoflavana [PV-1], 2â,7-dihidroxi-4â-metoxiisoflavana [PV-3], 4â,7-dihidroxi-2â-metoxiisoflavana [PV-4] e 2â,4â-dihidroxi-7-metoxiisoflavana [PV-5]), uma chalcona (2â,4â,4-trihidroxichalcona [PV-6]), e um triterpeno (lup-20(29)-en-3-ol [PV-2]), jà conhecidos na prÃpolis vermelha. A determinaÃÃo estrutural das substÃncias foi realizada atravÃs de mÃtodos espectroscÃpicos de IV, RMN de 1H, RMN de 13C-BB, RMN de 13C-DEPT 135Â, COSY, HSQC, HMBC e CG-EM. Realizou-se a determinaÃÃo de fenÃis totais, usando espectofotÃmetro, no extrato etanÃlico (EEPV), o qual apresentou um teor de compostos fenÃlicos de 133,3  4,35 mg de EAG/ g de amostra, resultado inferior aos relatados na literatura. Outro teste realizado foi o de atividade antioxidante, usando o mÃtodo de sequestro do radical DPPH, tanto no extrato etanÃlico, quanto nas fraÃÃes hexÃnica, diclorometano, acetato de etila e metanÃlica, apresentando resultados satisfatÃrios e superiores ao do padrÃo Vitamina C. AlÃm deste, foi realizado o ensaio de inibiÃÃo da enzima acetilcolinesterase, atravÃs de mÃtodo colorimÃtrico, no extrato etanÃlico e nas fraÃÃes hexÃnica, diclorometano, acetato de etila e metanÃlica, quase todos apresentando resultados positivos em relaÃÃo ao padrÃo sal de Eserina.
45

Zheng, Changping. "Synthesis and biological evaluation of ganglioside GM3 analogues." Thesis, Sorbonne université, 2019. http://www.theses.fr/2019SORUS432.

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Dans la présente étude, une série d’analogues du ganglioside GM3 avec des sialosides α-2, 6 contenant des sucres différents, y compris le galactose, le mannose, le lactose et la glucosamine, ont été entièrement synthétisés sur la base d’un protocole concis provenant de substrats et de réactifs disponibles dans le commerce. Et les blocs de construction de sucre avec un 6-OH libre ont été préparés par hydrolyse enzymatique, qui peut éviter de multiples procédures chimiques. En particulier, nous avons développé une nouvelle méthode chimioenzymatique pour synthétiser les dérivés glucosamine sialylée ou galactosamine sialylée, puis en utilisant cette approche, des analogues GM3 contenant de la glucosamine ont été construits avec succès. Tous les nouveaux composés ont été purifiés par chromatographie et ont été caractérisés par les spectres RMN et HRMS. Les activités biologiques de ces analogues synthétiques de GM3 ont été évaluées. Par des essais de cytotoxicité, les analogues GM3 ont été déterminés contre la cellule du cancer du côlon humain HCT116 et la cellule de leucémie K562. Il est intéressant de noter que, par le test de guérison des plaies, certains analogues ont montré des effets significatifs sur le mouvement des cellules tumorales, qui est censé représenter l’un des facteurs pertinents dans l’évaluation de la malignité des cancers. En outre, nous avons employé le modèle de cellule PC12 pour évaluer les effets de certains analogues de GM3 sur l’excroissance de neurites
In the present study, a series of ganglioside GM3 analogues with α-2,6 sialosides containing different sugars, including galactose, mannose, lactose and glucosamine, were totally synthesized based on a concise protocol from commercially available substrates and reagents. And the sugar building blocks with a free 6-OH were prepared by regioselective enzymatic hydrolysis, which can avoid multiple chemical procedures. In particular, we developed a new chemoenzymatic method to synthesize sialylated glucosamine or galactosamine derivatives, then using this approach, glucosamine-containing GM3 analogues were constructed successfully. All the new compounds were purified by chromatography and characterized by NMR and HRMS spectra. Furthermore, the biological activities of these synthetic GM3 analogues were evaluated. By cytotoxicity assays, GM3 analogues were determined against human colon cancer cell HCT116 and leukemia cell K562. Interestingly, by wound healing test, some analogues showed significant effects on tumor cell movement, which is believed to represent one of the relevant factors in assessing the malignancy of cancers. In addition, we employed the PC12 cell model to evaluate the effects of some GM3 analogues on neurite outgrowth
46

Fedorka, Sara R. "Synthesis and Biological Evaluation of Open-Chain Epothilones." University of Toledo Health Science Campus / OhioLINK, 2012. http://rave.ohiolink.edu/etdc/view?acc_num=mco1342626312.

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47

Alqahtani, Abdulateef Alqarni. "Synthesis and Biological Evaluation of New HDAC Inhibitors." University of Toledo / OhioLINK, 2018. http://rave.ohiolink.edu/etdc/view?acc_num=toledo1525448898248748.

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48

Martins, Carla Sofia Barros. "Chemical characterization and biological evaluation of Salicornia ramosissima." Master's thesis, Universidade de Aveiro, 2017. http://hdl.handle.net/10773/22783.

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Mestrado em Biotecnologia - Biotecnologia Alimentar
Atualmente, existe um elevado interesse na valorização de recursos naturais como fontes de compostos bioativos com potenciais efeitos benéficos para a saúde. A salicórnia é uma planta halófita que tem sido usada na alimentação e na medicina tradicional e mais recentemente no desenvolvimento de novos produtos alimentares, ilustrando o interesse da sua caracterização e avaliação. Esta planta encontra-se dispersa mundialmente, estando presente em algumas regiões em Portugal, nomeadamente na Ria de Aveiro e na Ria da Formosa, no Algarve. Esta planta cresce espontaneamente em ambientes salinos, estando inserida num ambiente de elevado stress. O género Salicornia compreende cerca de 25-30 espécies sendo a Salicornia ramosissima uma das menos estudadas atendendo à sua composição química. Alguns compostos bioativos são reportados nesta espécie, nomeadamente ácidos gordos, esteróis e compostos fenólicos, no entanto a informação encontra-se muito dispersa atendendo aos seus efeitos biológicos e composição. Neste sentido, o conhecimento da composição química e dos potenciais efeitos biológicos da S. ramosissima é extremamente importante para introduzir novas aplicações. Assim, o objetivo principal desta tese foi a caracterização química e avaliação in vitro da atividade antioxidante e anti-inflamatória extratos da S. ramosissima, recolhida na ria de Aveiro. Foram recolhidas quatro amostras, no estado de frutificação, em três locais da ria de Aveiro, estas amostras foram tratadas e armazenadas para posterior caracterização. Inicialmente foi estudado a fração lipofílica (extratos de diclorometano) da planta por GC-qMS, seguida do estudo da fração polar (extratos de metanol seguidos de extração com éter de petróleo/água) por LC-QqQ-MS. Posteriormente foram analisados minerais essenciais por ICP-OES e componentes potencialmente tóxicos por ICP-MS. Na fase final foi avaliada ainda a atividade antioxidante e anti-inflamatória dos extratos da fração polar da planta. De um total de 35 compostos da fração lipofílica, o ácido linolénico, o ácido linoleico, o stigmasterol, o β-sitosterol e o ácido palmítico foram os compostos maioritários. O conteúdo total de lipofílicos variou entre 541 e 5412 mg/100g peso seco. Na fração polar, o conteúdo em fenóis totais variou entre 1391 e 3398 mg de equivalentes de ácido gálico por 100g. A amostra vermelha da Marinha dos peixinhos (MPR) apresentou o maior conteúdo de fenóis. Da análise detalhada dos compostos fenólicos, foram identificados 32, sendo que 22 são reportados pela primeira vez nesta espécie. Isorhamnetina é composto maioritário presente nesta espécie. MPR apresentou um maior número de compostos identificados assim como um maior conteúdo estimado (1676.6 μg/g de extrato peso seco). O estudo dos minerais revelou que o sódio é o mineral mais abundante em todas as amostras, no entanto o consumo de 5g desta planta fresca numa salada corresponde apenas a 6.0-7.1% da dose diária recomendada (DDR) para este mineral. Relativamente ao selénio, magnésio e potássio pode contribuir para a DDR dos mesmos com 1.9-2.6%, 1.3-2.1% e 0.2-0.3%, respetivamente. Os estudos in vitro da atividade antioxidante foram expressos em valores de EC50. Os diferentes estudos permitiram avaliar o potencial da S. ramosissima como fonte de antioxidantes, estando os compostos fenólicos relacionados com esta atividade (r2>0.77). A atividade anti-inflamatória foi avaliada através da inibição da produção de dois metabolitos do metabolismo do ácido araquidónico (TXA2 e PGE2). Apesar de nenhum dos extratos inibir a produção de PGE2, o extrato da Marinha dos Peixinhos (MP) e o extrato do Rio Boco (BC) inibiram a produção de TXA2 em 33.2% e 18.1%. A aspirina, conhecida pelos seus efeitos em processos anti-inflamatórios foi usada na mesma metodologia, inibindo o PGE2 e o TXA2 em 18% e 69.3%, respetivamente. Sendo que algumas reações neste metabolismo envolvem radicais, os compostos previamente identificados nos extratos podem ser fundamentais para a atividade reportada. Além disso sendo que a aspirina inibe preferencialmente TXA2, pode-se inferir que os extratos de S. ramosissima apresentam um comportamento similar. Em conclusão os resultados obtidos permitiram a caracterização química sumária da S. ramosissima da Ria de Aveiro, com especial destaque para os compostos lipofílicos e fenólicos e ainda a presença de minerais essenciais. A presença de compostos com potenciais efeitos benéficos para a saúde humana (flavonoides, fitoesteróis e ácidos gordos ω-3 e ω-6) pode ser um fator determinante para a valorização desta planta assim como a presença de baixo teor de sal, podendo ser usado como coadjuvante na dieta de forma a diminuir o risco de doenças cardiovasculares. O efeito anti-inflamatório dos extratos da S. ramosissima revelou o seu potencial impacto na produção de TXA2.
Relativamente ao selénio, magnésio e potássio pode contribuir para a DDR dos mesmos com 1.9-2.6%, 1.3-2.1% e 0.2-0.3%, respetivamente. Os estudos in vitro da atividade antioxidante foram expressos em valores de EC50. Os diferentes estudos permitiram avaliar o potencial da S. ramosissima como fonte de antioxidantes, estando os compostos fenólicos relacionados com esta atividade (r2>0.77). A atividade anti-inflamatória foi avaliada através da inibição da produção de dois metabolitos do metabolismo do ácido araquidónico (TXA2 e PGE2). Apesar de nenhum dos extratos inibir a produção de PGE2, o extrato da Marinha dos Peixinhos (MP) e o extrato do Rio Boco (BC) inibiram a produção de TXA2 em 33.2% e 18.1%. A aspirina, conhecida pelos seus efeitos em processos anti-inflamatórios foi usada na mesma metodologia, inibindo o PGE2 e o TXA2 em 18% e 69.3%, respetivamente. Sendo que algumas reações neste metabolismo envolvem radicais, os compostos previamente identificados nos extratos podem ser fundamentais para a atividade reportada. Além disso sendo que a aspirina inibe preferencialmente TXA2, pode-se inferir que os extratos de S. ramosissima apresentam um comportamento similar. Em conclusão os resultados obtidos permitiram a caracterização química sumária da S. ramosissima da Ria de Aveiro, com especial destaque para os compostos lipofílicos e fenólicos e ainda a presença de minerais essenciais. A presença de compostos com potenciais efeitos benéficos para a saúde humana (flavonoides, fitoesteróis e ácidos gordos ω-3 e ω-6) pode ser um fator determinante para a valorização desta planta assim como a presença de baixo teor de sal, podendo ser usado como coadjuvante na dieta de forma a diminuir o risco de doenças cardiovasculares. O efeito anti-inflamatório dos extratos da S. ramosissima revelou o seu potencial impacto na produção de TXA2.
49

Silva, Carlos Fábio Magalhães da. "Synthesis and biological evaluation of new 2-benzylchromones." Master's thesis, Universidade de Aveiro, 2017. http://hdl.handle.net/10773/21243.

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Mestrado em Bioquímica
Esta dissertação aborda a síntese de compostos do tipo cromona (4H-cromen-4-ona), em particular 2-benzilcromonas, com distintos padrões de substituição e também a avaliação da sua actividade anti-inflamatória e inibidora da acetilcolinesterase. As cromonas apresentam-se como sendo uma vasta classe de compostos naturais heterocíclicos contendo oxigénio e que representam o fragmento principal de diversos grupos de flavonoides amplamente distribuídos pela Natureza. Este tipo de compostos apresenta uma ampla gama de actividades biológicas e este esqueleto de cromona tem provado ser um núcleo estrutural crucial no domínio dos produtos naturais, na química orgânica sintética e em estudos de desenvolvimento de novas drogas, devido às suas características estruturais particulares e diversas propriedades farmacológicas. Por essas razões, o interesse no estudo da bioactividade e respectivas aplicações biológicas deste tipo de compostostem vindo a estimular a síntese de novos derivados de cromona e o desenvolvimento de cada vez mais estudos de relação estrutura-actividade. O principal objectivo deste projecto passa então pela síntese de novas 2-benzilcromonas, conjugando diferentes 2’-hidroxiacetofenonas e 2-fenilacetatos de etilo de forma a obter compostos com padrões de substituição distintos, e avaliar o seu potencial como agentes anti-inflamatórios e/ou inibidores da acetilcolinesterase. No primeiro capitulo, é realizada uma introdução, onde a estrutura química das cromonas e principais actividades biológicas são indicadas. Nesse mesmo capítulo, os métodos de síntese para a obtenção deste tipo de compostos são brevemente descritos e estudos de relação estrutura-actividade, desenvolvidos ao longo dos últimos anos, descritos de forma a perceber a influencia de diferentes substituintes. No segundo capítulo, os métodos de síntese realizados ao longo do projecto são descritos, seguidos das respectivas explicações mecanísticas e da completa caracterização estrutural dos compostos sintetizados, utilizando técnicas espectroscópicas como Ressonância Molecular Nuclear de 1H e 13C, Heteromolecular Single Quantum Coherence (HSQC) e Heteronuclear Multiple Bond Correlation (HMBC), e espectrometria de massa. No terceiro capítulo, os resultados da avaliação biológica dos compostos serão apresentados, nomeadamente as suas actividades anti-inflamatória e inibidora da acetilcolinesterase. Através dos resultados obtidos, torna-se possível entender o efeito dos diferentes substituintes nessas actividades, sendo o composto 2-benzil-5-(benziloxi)-4H-cromen-4-ona (86.j) o mais promissor composto anti-inflamatório. Relativamente à actividade anti-acetilcolinesterase, o composto 2-(3,4-di-hidroxibenzil)-5-hidroxi-4H-cromen-4-ona (86.m) é o mais promissor. No quarto capítulo, uma extensa descrição dos procedimentos experimentais desenvolvidos, ao longo do nosso projecto, é apresentada, enquanto no último capítulo (Capítulo V) são apresentadas as conclusões finais sobre o trabalho realizado e as perspectivas futuras.
This dissertation approaches the synthesis of chromone (4H-chromen-4-one) type compounds, particularly 2-benzylchromones, with distinct substitution patterns and the evaluation of their anti-inflammatory and anti-acetylcholinesterase activities. Chromones are a wide class of naturally occurring oxygen-containing heterocyclic compounds with a benzoannelated γ-pyrone and represent the core fragment of several groups of flavonoids widely distributed in nature. This type of compounds presents a wide range of biological activities and the chromone ring system has proven to be a crucial core in the domain of natural products, in synthetic organic chemistry and in drug discovery studies because of its particular structural features and diverse pharmacological properties. For these reasons, the interest in the study of their bioactivity and related biological applications has stimulated the synthesis of novel chromone derivatives and development of more and more structure-activity relationships. The main objective of this project concerns the synthesis of new 2-benzylchromones, conjugating different 2’-hydroxyacetophenones and ethyl 2-phenylacetates to obtain compounds with distinct substitution patterns, and evaluate their potential as anti-inflammatory and/or anti-acetylcholinesterase agents. In the first chapter, an introduction is made, where chromones chemical structure and their principal biological activities are indicated. In the same chapter, the most common synthetic methods for the obtention of chromones are briefly depicted and structure-activity relationship (SAR) studies, developed throughout the years, are described, highlighting the influence of different substituents. In the second chapter, the synthetic methods performed are described, followed by a mechanistic explanation and a complete structural characterization of the synthesized compounds, using spectroscopic techniques, like 1H and 13C Nuclear Molecular Resonance (NMR), Heteromolecular Single Quantum Coherence (HSQC) and Heteronuclear Multiple Bond Correlation (HMBC), and mass spectrometry (MS). In a third chapter, the biological evaluation of our compounds is depicted, namely their anti-inflammatory and anti-acetylcholinesterase activities. From the results obtained, it is possible to understand the effect of different substituents in it, being compound 2-benzyl-5-(benzyloxy)-4H-chromen-4-one (86.j) the most promising anti-inflammatory one. Regarding the anti-acetylcholinesterase activity, compound 2-(3,4-dihydroxybenzyl)-5-hidroxy-4H-chromen-4-one (86.m) is the most promising. In chapter IV, an extensive description of the experimental procedures developed throughout our project are displayed, while in the final chapter (chapter V) the conclusions are drawn and some future perspectives presented.
50

Arno, Maria Chiara. "Design, synthesis and biological evaluation of hepcidin analogues." Thesis, King's College London (University of London), 2015. http://kclpure.kcl.ac.uk/portal/en/theses/design-synthesis-and-biological-evaluation-of-hepcidin-analogues(58e746c7-dbd9-4cbe-904c-0e5abe5b24b7).html.

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Abstract:
Hepcidin is a peptide hormone involved in the control of iron homeostasis. It has 25 amino acids with an antiparallel beta-sheet structure stabilized by four disulfide bonds. Hepcidin binds to the sole known iron exporter, ferroportin, leading to its internalization and degradation by a mechanism not fully understood. Hepcidin has an important role in iron metabolism disorders, such as hemochromatosis and anaemia. However, hepcidin analogues are currently not available for clinical use. The aims of this project are twofold: - to design and synthesise a fluorescent hepcidin analogue that can be used as a biological tool to further investigate hepcidin-ferroportin interactions; - to design and synthesise small peptide-like hepcidin analogues which can bind and internalize ferroportin. At the end of the thesis there is a pullout which summarises the structures of the peptides synthesised in this project. Chapter 2 describes the synthesis of eleven linear peptides, synthesised to facilitate a structure-activity relationship study on the N-terminus of hepcidin, which is the most active part of the peptide. Chapter 3 describes the synthesis of two hepcidin analogues (15 and 19) containing intramolecular disulfides. Peptide 15 represents the N-terminus of hepcidin constrained by one intramolecular disulfide. Peptide 19 sequence contains amino acids from the N-terminus of hepcidin and from the C-terminus, which we considered to be also relevant for the binding to ferroportin. The cysteines in peptide 19 were oxidised to disulfides. Chapter 4 focuses on the synthesis of two hepcidin analogues (27 and 35) with intermolecular disulfides: peptide 27 containing one intermolecular disulfide and peptide 35 containing two. Intermolecular disulfide formation is more challenging to achieve, as oxidation of the cysteines needs to be selective. A successful approach was developed by carefully selecting the protecting groups for the thiol group of the cysteines, which were removed stepwise in order to achieve selectivity. Chapter 5 discusses the synthesis and folding of [Lys21] 6-carboxy tetramethylrhodamine (TMR) labelled hepcidin and N13 6-carboxy uorescein (CF) labelled hepcidin 20. Hepcidin sequence presents a methionine in position 21, near the C-terminus, which was replaced, in the synthesis of [Lys21] TMR hepcidin, with a lysine protected at the N with 1-(4,4-dimethyl-2,6-dioxocyclohexylidene)ethyl (Dde). This approach provides a site where TMR can be selectively attached. In N13 CF hepcidin 20 the last ve amino acids of hepcidin were not included in the synthesis and the peptide was labelled at the lysine in position 13. This peptide is not active and was synthesised as a negative control for biological evaluation purposes. Chapter 6 is divided in two sections. The first section describes the structural analysis by circular dichroism of the analogues synthesised in this project. The second section illustrates the biological evaluation results. Biological assays were performed at Vifor Pharma laboratories in Zurich. The [Lys21] TMR hepcidin was found to possess appreciable biological activity, being able to bind and internalize ferroportin with a potency only 4 fold lower than that of synthetic hepcidin. The structure-activity relationship study, conducted with peptides mimicking the N-terminus of hepcidin, suggests that a disul de exchange may be involved in the binding between the N-terminus and ferroportin. Furthermore, between these analogues, peptides 5 and 8 were found to be able to bind ferroportin without leading to its internalisation, suggesting an interesting antagonist activity. Peptides 19 and 27 show some activity, being 189 and 13 fold less active than hepcidin 25, respectively.