Journal articles on the topic 'Immunopeptidomics'
Create a spot-on reference in APA, MLA, Chicago, Harvard, and other styles
Consult the top 50 journal articles for your research on the topic 'Immunopeptidomics.'
Next to every source in the list of references, there is an 'Add to bibliography' button. Press on it, and we will generate automatically the bibliographic reference to the chosen work in the citation style you need: APA, MLA, Harvard, Chicago, Vancouver, etc.
You can also download the full text of the academic publication as pdf and read online its abstract whenever available in the metadata.
Browse journal articles on a wide variety of disciplines and organise your bibliography correctly.
Ternette, Nicola, and Anthony W. Purcell. "Immunopeptidomics Special Issue." PROTEOMICS 18, no. 12 (June 2018): 1800145. http://dx.doi.org/10.1002/pmic.201800145.
Full textShapiro, Ilja E., Marco Tognetti, Tikira Temu, Oliver M. Bernhardt, Daniel Redfern, Yuehan Feng, Roland Bruderer, and Lukas Reiter. "Abstract 5376: Quantitative profiling of HLA class I and class II antigens and neoantigens in tissue biopsy and PBMC samples using an optimized mass spectrometry-based workflow." Cancer Research 84, no. 6_Supplement (March 22, 2024): 5376. http://dx.doi.org/10.1158/1538-7445.am2024-5376.
Full textMayer, Rupert L., and Karl Mechtler. "Immunopeptidomics in the Era of Single-Cell Proteomics." Biology 12, no. 12 (December 12, 2023): 1514. http://dx.doi.org/10.3390/biology12121514.
Full textConnelley, Timothy, Annalisa Nicastri, Tara Sheldrake, Christina Vrettou, Andressa Fisch, Birkir Reynisson, Soren Buus, et al. "Immunopeptidomic Analysis of BoLA-I and BoLA-DR Presented Peptides from Theileria parva Infected Cells." Vaccines 10, no. 11 (November 11, 2022): 1907. http://dx.doi.org/10.3390/vaccines10111907.
Full textChong, Chloe, George Coukos, and Michal Bassani-Sternberg. "Identification of tumor antigens with immunopeptidomics." Nature Biotechnology 40, no. 2 (October 11, 2021): 175–88. http://dx.doi.org/10.1038/s41587-021-01038-8.
Full textMellacheruvu, Dattatreya, Rachel Pyke, Charles Abbott, Nick Phillips, Sejal Desai, Rena McClory, John West, Richard Chen, and Sean Boyle. "57 Precision neoantigen discovery using novel algorithms and expanded HLA-ligandome datasets." Journal for ImmunoTherapy of Cancer 8, Suppl 3 (November 2020): A62. http://dx.doi.org/10.1136/jitc-2020-sitc2020.0057.
Full textFoster, Leonard, Queenie Chan, Charlie Kuan, and Hong Bing Yu. "A framework for unbiased, robust and system-wide characterization of MHC-bound peptides and epitopes (APP5P.111)." Journal of Immunology 194, no. 1_Supplement (May 1, 2015): 183.13. http://dx.doi.org/10.4049/jimmunol.194.supp.183.13.
Full textKochin, Vitaly, Takayuki Kanaseki, Sho Miyamoto, Daichi Morooka, Keigo Moniwa, Yutaro Ikeuchi, Akari Takaya, Yoshihiko Hirohashi, Toshihiko Torigoe, and Noriyuki Sato. "Human cancer immunopeptidomics for efficient CTL immunotherapy." Annals of Oncology 26 (November 2015): vii30. http://dx.doi.org/10.1093/annonc/mdv424.02.
Full textIstrail, S., L. Florea, B. V. Halldorsson, O. Kohlbacher, R. S. Schwartz, V. B. Yap, J. W. Yewdell, and S. L. Hoffman. "Comparative immunopeptidomics of humans and their pathogens." Proceedings of the National Academy of Sciences 101, no. 36 (August 23, 2004): 13268–72. http://dx.doi.org/10.1073/pnas.0404740101.
Full textGarcia‐Moure, Marc, Andrew G. Gillard, Marta M. Alonso, Juan Fueyo, and Candelaria Gomez‐Manzano. "Oncolytic adenoviruses and immunopeptidomics: a convenient marriage." Molecular Oncology 18, no. 4 (April 2024): 781–84. http://dx.doi.org/10.1002/1878-0261.13648.
Full textTegeler, Christian M., Jonas S. Heitmann, Helmut R. Salih, Juliane S. Walz, and Annika Nelde. "Abstract 1972: Clinical implications of HLA expression and immunopeptidome-presented tumor antigens in ovarian carcinoma." Cancer Research 82, no. 12_Supplement (June 15, 2022): 1972. http://dx.doi.org/10.1158/1538-7445.am2022-1972.
Full textZhang, Bing, and Michal Bassani-Sternberg. "Current perspectives on mass spectrometry-based immunopeptidomics: the computational angle to tumor antigen discovery." Journal for ImmunoTherapy of Cancer 11, no. 10 (October 2023): e007073. http://dx.doi.org/10.1136/jitc-2023-007073.
Full textDanner, Rebecca, Michael Pereckas, Joseph Rouse, Amanda Wahhab, and Robert B. Lochhead. "Expanded presentation of Lyme autoantigens and identification of a novel immunogenic CD4+ T cell epitope from Borrelia burgdorferiMCP4 in murine Lyme arthritis." Journal of Immunology 210, no. 1_Supplement (May 1, 2023): 221.17. http://dx.doi.org/10.4049/jimmunol.210.supp.221.17.
Full textBichmann, Leon, Annika Nelde, Michael Ghosh, Lukas Heumos, Christopher Mohr, Alexander Peltzer, Leon Kuchenbecker, et al. "MHCquant: Automated and Reproducible Data Analysis for Immunopeptidomics." Journal of Proteome Research 18, no. 11 (October 7, 2019): 3876–84. http://dx.doi.org/10.1021/acs.jproteome.9b00313.
Full textChavda, Vivek P., and Elrashdy M. Redwan. "SARS-CoV-2: Immunopeptidomics and Other Immunological Studies." Vaccines 10, no. 11 (November 21, 2022): 1975. http://dx.doi.org/10.3390/vaccines10111975.
Full textCourcelles, Mathieu, Chantal Durette, Tariq Daouda, Jean-Philippe Laverdure, Krystel Vincent, Sébastien Lemieux, Claude Perreault, and Pierre Thibault. "MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses." Journal of Proteome Research 19, no. 4 (February 28, 2020): 1873–81. http://dx.doi.org/10.1021/acs.jproteome.9b00859.
Full textBouzid, Rachid, Monique T. A. de Beijer, Robbie J. Luijten, Karel Bezstarosti, Amy L. Kessler, Marco J. Bruno, Maikel P. Peppelenbosch, Jeroen A. A. Demmers, and Sonja I. Buschow. "Empirical Evaluation of the Use of Computational HLA Binding as an Early Filter to the Mass Spectrometry-Based Epitope Discovery Workflow." Cancers 13, no. 10 (May 12, 2021): 2307. http://dx.doi.org/10.3390/cancers13102307.
Full textThibault, Pierre, and Claude Perreault. "Immunopeptidomics: Reading the Immune Signal That Defines Self From Nonself." Molecular & Cellular Proteomics 21, no. 6 (June 2022): 100234. http://dx.doi.org/10.1016/j.mcpro.2022.100234.
Full textPurcell, Anthony W., Sri H. Ramarathinam, and Nicola Ternette. "Mass spectrometry–based identification of MHC-bound peptides for immunopeptidomics." Nature Protocols 14, no. 6 (May 15, 2019): 1687–707. http://dx.doi.org/10.1038/s41596-019-0133-y.
Full textDanner, Rebecca, Michael Pereckas, Joseph Rouse, Amanda Wahhab, and Robert Lochhead. "Immunopeptidomics analysis of Lyme arthritis: insights into infection and autoimmunity." Journal of Immunology 206, no. 1_Supplement (May 1, 2021): 93.10. http://dx.doi.org/10.4049/jimmunol.206.supp.93.10.
Full textShapiro, Ilja E., and Michal Bassani-Sternberg. "The impact of immunopeptidomics: From basic research to clinical implementation." Seminars in Immunology 66 (March 2023): 101727. http://dx.doi.org/10.1016/j.smim.2023.101727.
Full textFaridi, Pouya, Anthony W. Purcell, and Nathan Paul Croft. "In Immunopeptidomics We Need a Sniper Instead of a Shotgun." PROTEOMICS 18, no. 12 (March 7, 2018): 1700464. http://dx.doi.org/10.1002/pmic.201700464.
Full textLi, Kai, Antrix Jain, Anna Malovannaya, Bo Wen, and Bing Zhang. "DeepRescore: Leveraging Deep Learning to Improve Peptide Identification in Immunopeptidomics." PROTEOMICS 20, no. 21-22 (September 27, 2020): 1900334. http://dx.doi.org/10.1002/pmic.201900334.
Full textVaughan, Kerrie, Etienne Caron, Bjoern Peters, and Alessandro Sette. "The future of the immunopeptidome in health and disease: a comprehensive analysis of naturally processed ligand data." Journal of Immunology 196, no. 1_Supplement (May 1, 2016): 46.4. http://dx.doi.org/10.4049/jimmunol.196.supp.46.4.
Full textPeltonen, Karita, Sara Feola, Husen M. Umer, Jacopo Chiaro, Georgios Mermelekas, Erkko Ylösmäki, Sari Pesonen, Rui M. M. Branca, Janne Lehtiö, and Vincenzo Cerullo. "Therapeutic Cancer Vaccination with Immunopeptidomics-Discovered Antigens Confers Protective Antitumor Efficacy." Cancers 13, no. 14 (July 7, 2021): 3408. http://dx.doi.org/10.3390/cancers13143408.
Full textShabani, Nor Raihan Mohammad, Che Muhammad Khairul Hisyam Ismail, Chiuan Herng Leow, Munirah Mokhtar, Kirnpal Kaur Banga Singh, and Chiuan Yee Leow. "Identification of MHC Class II Immunopeptidomes from Shigella flexneri 2a-infected Macrophages as Potential Vaccine Candidates." Indonesian Biomedical Journal 14, no. 2 (June 28, 2022): 139–47. http://dx.doi.org/10.18585/inabj.v14i2.1781.
Full textAbd El-Baky, Nawal, Amro A. Amara, and Elrashdy M. Redwan. "HLA-I and HLA-II Peptidomes of SARS-CoV-2: A Review." Vaccines 11, no. 3 (February 25, 2023): 548. http://dx.doi.org/10.3390/vaccines11030548.
Full textKallor, Ashwin Adrian, Michał Waleron, Georges Bedran, Patrícia Eugénio, Catia Pesquita, Daniel Faria, Fabio Massimo Zanzotto, Christophe Battail, Ajitha Rajan, and Javier Alfaro. "Abstract 6577: CARMEN: A pan-HLA and pan-cancer proteogenomic database on antigen presentation to support cancer immunotherapy." Cancer Research 83, no. 7_Supplement (April 4, 2023): 6577. http://dx.doi.org/10.1158/1538-7445.am2023-6577.
Full textKlein, Joshua, Daniel Sprague, Monica Lane, Meghan Hart, Olivia Petrillo, Italo Faria do Valle, Matthew Davis, et al. "Abstract 904: AI platform provides an EDGE and enables state-of-the-art identification of peptide-HLAs for the development of T cell inducing vaccines." Cancer Research 84, no. 6_Supplement (March 22, 2024): 904. http://dx.doi.org/10.1158/1538-7445.am2024-904.
Full textStopfer, Lauren E., Jason E. Conage-Pough, and Forest M. White. "Quantitative Consequences of Protein Carriers in Immunopeptidomics and Tyrosine Phosphorylation MS2 Analyses." Molecular & Cellular Proteomics 20 (2021): 100104. http://dx.doi.org/10.1016/j.mcpro.2021.100104.
Full textFritsche, Jens, Barbara Rakitsch, Franziska Hoffgaard, Michael Römer, Heiko Schuster, Daniel J. Kowalewski, Martin Priemer, et al. "Translating Immunopeptidomics to Immunotherapy-Decision-Making for Patient and Personalized Target Selection." PROTEOMICS 18, no. 12 (April 10, 2018): 1700284. http://dx.doi.org/10.1002/pmic.201700284.
Full textLi, Kai, Antrix Jain, Anna Malovannaya, Bo Wen, and Bing Zhang. "Front Cover: DeepRescore: Leveraging Deep Learning to Improve Peptide Identification in Immunopeptidomics." PROTEOMICS 20, no. 21-22 (November 2020): 2070151. http://dx.doi.org/10.1002/pmic.202070151.
Full textPurcell, Anthony. "Mass spectrometry and immunopeptidomics – teaching us new lessons in antigen processing and presentation." Molecular Immunology 150 (October 2022): 35. http://dx.doi.org/10.1016/j.molimm.2022.05.116.
Full textAbelin, Jennifer. "Abstract 1439 Mass spectrometry based immunopeptidomics as a tool for understanding antigen presentation." Journal of Biological Chemistry 300, no. 3 (March 2024): 106634. http://dx.doi.org/10.1016/j.jbc.2024.106634.
Full textMohsen, Mona O., Daniel E. Speiser, Justine Michaux, HuiSong Pak, Brian J. Stevenson, Monique Vogel, Varghese Philipose Inchakalody, et al. "Bedside formulation of a personalized multi-neoantigen vaccine against mammary carcinoma." Journal for ImmunoTherapy of Cancer 10, no. 1 (January 2022): e002927. http://dx.doi.org/10.1136/jitc-2021-002927.
Full textWilder, Brandon Keith, Luna de Lacerda, Camila R. R. Barbosa, Maya Aleshnick, Thomas Martinson, David Morrow, Zeshou Zhao, Gaurav Gaiha, and Caroline Junqueira. "Malaria antigens are presented to CD8 T cells via the non-classical HLA-E." Journal of Immunology 208, no. 1_Supplement (May 1, 2022): 170.27. http://dx.doi.org/10.4049/jimmunol.208.supp.170.27.
Full textMaringer, Yacine, Lena Freudenmann, Annika Nelde, Jonas S. Heitmann, Helmut R. Salih, Marissa Dubbelaar, Jörg Hennenlotter, et al. "Abstract 3556: Immunopeptidomics-guided tumor antigen warehouse design and first clinical application of a personalized peptide vaccine for prostate cancer." Cancer Research 82, no. 12_Supplement (June 15, 2022): 3556. http://dx.doi.org/10.1158/1538-7445.am2022-3556.
Full textSolleder, Marthe, Philippe Guillaume, Julien Racle, Justine Michaux, Hui-Song Pak, Markus Müller, George Coukos, Michal Bassani-Sternberg, and David Gfeller. "Mass Spectrometry Based Immunopeptidomics Leads to Robust Predictions of Phosphorylated HLA Class I Ligands." Molecular & Cellular Proteomics 19, no. 2 (December 17, 2019): 390–404. http://dx.doi.org/10.1074/mcp.tir119.001641.
Full textAndreatta, Massimo, Annalisa Nicastri, Xu Peng, Gemma Hancock, Lucy Dorrell, Nicola Ternette, and Morten Nielsen. "MS-Rescue: A Computational Pipeline to Increase the Quality and Yield of Immunopeptidomics Experiments." PROTEOMICS 19, no. 4 (January 18, 2019): 1800357. http://dx.doi.org/10.1002/pmic.201800357.
Full textFritsche, Jens, Barbara Rakitsch, Franziska Hoffgaard, Michael Römer, Heiko Schuster, Daniel J. Kowalewski, Martin Priemer, et al. "Front Cover: Translating Immunopeptidomics to Immunotherapy-Decision-Making for Patient and Personalized Target Selection." PROTEOMICS 18, no. 12 (June 2018): 1870101. http://dx.doi.org/10.1002/pmic.201870101.
Full textStutzmann, Charlotte, Jiaxi Peng, Zhaoguan Wu, Christopher Savoie, Isabelle Sirois, Pierre Thibault, Aaron R. Wheeler, and Etienne Caron. "Unlocking the potential of microfluidics in mass spectrometry-based immunopeptidomics for tumor antigen discovery." Cell Reports Methods 3, no. 6 (June 2023): 100511. http://dx.doi.org/10.1016/j.crmeth.2023.100511.
Full textTetens, Ashley R., Allison M. Martin, Antje Arnold, Orlandi V. Novak, Adrian Idrizi, Rakel Tryggvadottir, Jordyn Craig-Schwartz, et al. "DIPG-58. TARGETING DISORDERED DNA METHYLATION IN DIPG TO CONSTRAIN VARIABILITY AND INDUCE IMMUNE SIGNALING." Neuro-Oncology 26, Supplement_4 (June 18, 2024): 0. http://dx.doi.org/10.1093/neuonc/noae064.111.
Full textPyke, Rachel Marty, Steven Dea, Hima Anbunathan, Charles W. Abbott, Neeraja Ravi, Jason Harris, Gabor Bartha, et al. "Abstract 5640: Mono-allelic immunopeptidomics data from 109 MHC-I alleles reveals variability in binding preferences and improves neoantigen prediction algorithm." Cancer Research 82, no. 12_Supplement (June 15, 2022): 5640. http://dx.doi.org/10.1158/1538-7445.am2022-5640.
Full textLi, Chen, Jerico Revote, Sri H. Ramarathinam, Shan Zou Chung, Nathan P. Croft, Katherine E. Scull, Ziyi Huang, et al. "Resourcing, annotating, and analysing synthetic peptides of SARS‐CoV‐2 for immunopeptidomics and other immunological studies." PROTEOMICS 21, no. 17-18 (April 14, 2021): 2100036. http://dx.doi.org/10.1002/pmic.202100036.
Full textGraciotti, Michele, Fabio Marino, HuiSong Pak, Petra Baumgaertner, Anne-Christine Thierry, Johanna Chiffelle, Marta A. S. Perez, et al. "Deciphering the Mechanisms of Improved Immunogenicity of Hypochlorous Acid-Treated Antigens in Anti-Cancer Dendritic Cell-Based Vaccines." Vaccines 8, no. 2 (June 2, 2020): 271. http://dx.doi.org/10.3390/vaccines8020271.
Full textStopfer, L. E., A. D. D'Souza, and F. M. White. "1,2,3, MHC: a review of mass-spectrometry-based immunopeptidomics methods for relative and absolute quantification of pMHCs." Immuno-Oncology and Technology 11 (October 2021): 100042. http://dx.doi.org/10.1016/j.iotech.2021.100042.
Full textStopfer, L. E., A. D. D'Souza, and F. M. White. "1,2,3, MHC: a review of mass-spectrometry-based immunopeptidomics methods for relative and absolute quantification of pMHCs." Immuno-Oncology and Technology 11 (October 2021): 100042. http://dx.doi.org/10.1016/j.iotech.2021.100042.
Full textEly, Zackery A., William A. Freed-Pastor, Zachary J. Kulstad, Jennifer G. Abelin, Eva Verzani, Kevin S. Kapner, Susan Klaeger, et al. "Abstract C014: Broadening the repertoire of PDAC-specific targets for immune-based therapy through high-resolution immunopeptidomics." Cancer Research 82, no. 22_Supplement (November 15, 2022): C014. http://dx.doi.org/10.1158/1538-7445.panca22-c014.
Full textElAbd, Hesham, Frauke Degenhardt, Tomas Koudelka, Ann-Kristin Kamps, Andreas Tholey, Petra Bacher, Tobias L. Lenz, Andre Franke, and Mareike Wendorff. "Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data." BMC Bioinformatics 22, no. 1 (August 17, 2021). http://dx.doi.org/10.1186/s12859-021-04315-0.
Full textWacker, Marcel, Jens Bauer, Laura Wessling, Marissa Dubbelaar, Annika Nelde, Hans-Georg Rammensee, and Juliane S. Walz. "Immunoprecipitation methods impact the peptide repertoire in immunopeptidomics." Frontiers in Immunology 14 (July 21, 2023). http://dx.doi.org/10.3389/fimmu.2023.1219720.
Full text