Journal articles on the topic 'Hexameric proteins'
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Skálová, Tereza, Jan Bláha, Karl Harlos, Jarmila Dušková, Tomáš Koval', Jan Stránský, Jindřich Hašek, Ondřej Vaněk, and Jan Dohnálek. "Four crystal structures of human LLT1, a ligand of human NKR-P1, in varied glycosylation and oligomerization states." Acta Crystallographica Section D Biological Crystallography 71, no. 3 (February 26, 2015): 578–91. http://dx.doi.org/10.1107/s1399004714027928.
Jomaa, Ahmad, Jack Iwanczyk, Julie Tran, and Joaquin Ortega. "Characterization of the Autocleavage Process of the Escherichia coli HtrA Protein: Implications for its Physiological Role." Journal of Bacteriology 191, no. 6 (December 19, 2008): 1924–32. http://dx.doi.org/10.1128/jb.01187-08.
Myasoedova, Ksenia N., and Natalia N. Magretova. "Cross-Linking Study of Cytochrome P450 1A2 in Proteoliposomes." Bioscience Reports 21, no. 1 (February 1, 2001): 63–72. http://dx.doi.org/10.1023/a:1010486118448.
Chaudhury, Paushali, Chris van der Does, and Sonja-Verena Albers. "Characterization of the ATPase FlaI of the motor complex of the Pyrococcus furiosus archaellum and its interactions between the ATP-binding protein FlaH." PeerJ 6 (June 18, 2018): e4984. http://dx.doi.org/10.7717/peerj.4984.
Jomaa, Ahmad, Daniela Damjanovic, Vivian Leong, Rodolfo Ghirlando, Jack Iwanczyk, and Joaquin Ortega. "The Inner Cavity of Escherichia coli DegP Protein Is Not Essentialfor Molecular Chaperone and Proteolytic Activity." Journal of Bacteriology 189, no. 3 (November 22, 2006): 706–16. http://dx.doi.org/10.1128/jb.01334-06.
Miller, Justin M., and Eric J. Enemark. "Archaeal MCM Proteins as an Analog for the Eukaryotic Mcm2–7 Helicase to Reveal Essential Features of Structure and Function." Archaea 2015 (2015): 1–14. http://dx.doi.org/10.1155/2015/305497.
Sellin, Mikael E., Sonja Stenmark, and Martin Gullberg. "Mammalian SEPT9 isoforms direct microtubule-dependent arrangements of septin core heteromers." Molecular Biology of the Cell 23, no. 21 (November 2012): 4242–55. http://dx.doi.org/10.1091/mbc.e12-06-0486.
Zhao, Li, Shuji Kanamaru, Chatree'chalerm Chaidirek, and Fumio Arisaka. "P15 and P3, the Tail Completion Proteins of Bacteriophage T4, Both Form Hexameric Rings." Journal of Bacteriology 185, no. 5 (March 1, 2003): 1693–700. http://dx.doi.org/10.1128/jb.185.5.1693-1700.2003.
Ochoa, Jessica M., Oscar Mijares, Andrea A. Acosta, Xavier Escoto, Nancy Leon-Rivera, Joanna D. Marshall, Michael R. Sawaya, and Todd O. Yeates. "Structural characterization of hexameric shell proteins from two types of choline-utilization bacterial microcompartments." Acta Crystallographica Section F Structural Biology Communications 77, no. 9 (August 24, 2021): 275–85. http://dx.doi.org/10.1107/s2053230x21007470.
Heinemann, Udo, Yvette Roske, Anup Arumughan, and Erich Wanker. "Remodeling of the AAA+ ATPase p97 by the UBX Adaptor Protein ASPL." Acta Crystallographica Section A Foundations and Advances 70, a1 (August 5, 2014): C430. http://dx.doi.org/10.1107/s2053273314095692.
Chen, Zhenguo, Lei Sun, Zhihong Zhang, Andrei Fokine, Victor Padilla-Sanchez, Dorit Hanein, Wen Jiang, Michael G. Rossmann, and Venigalla B. Rao. "Cryo-EM structure of the bacteriophage T4 isometric head at 3.3-Å resolution and its relevance to the assembly of icosahedral viruses." Proceedings of the National Academy of Sciences 114, no. 39 (September 11, 2017): E8184—E8193. http://dx.doi.org/10.1073/pnas.1708483114.
Fu, Xinyi, Vladyslava Sokolova, Kristofor J. Webb, William Old, and Soyeon Park. "Ubiquitin-dependent switch during assembly of the proteasomal ATPases mediated by Not4 ubiquitin ligase." Proceedings of the National Academy of Sciences 115, no. 52 (December 10, 2018): 13246–51. http://dx.doi.org/10.1073/pnas.1805353115.
Hoebe, E. K., S. H. Hutajulu, J. van Beek, S. J. Stevens, D. K. Paramita, A. E. Greijer, and J. M. Middeldorp. "Purified Hexameric Epstein-Barr Virus-Encoded BARF1 Protein for Measuring Anti-BARF1 Antibody Responses in Nasopharyngeal Carcinoma Patients." Clinical and Vaccine Immunology 18, no. 2 (December 1, 2010): 298–304. http://dx.doi.org/10.1128/cvi.00193-10.
Duprez, Kevin, Melissa A. Scranton, Linda L. Walling, and Li Fan. "Structure of tomato wound-induced leucine aminopeptidase sheds light on substrate specificity." Acta Crystallographica Section D Biological Crystallography 70, no. 6 (May 29, 2014): 1649–58. http://dx.doi.org/10.1107/s1399004714006245.
Riciluca, K. C. T., A. C. Borges, J. F. R. Mello, U. C. de Oliveira, D. C. Serdan, A. Florez-Ariza, E. Chaparro, et al. "Myriapod haemocyanin: the first three-dimensional reconstruction of Scolopendra subspinipes and preliminary structural analysis of S. viridicornis." Open Biology 10, no. 4 (April 2020): 190258. http://dx.doi.org/10.1098/rsob.190258.
Jeoung, Jae-Hun, Diana A. Pippig, Berta M. Martins, Nadine Wagener, and Holger Dobbek. "HTHP: A Novel Class of Hexameric, Tyrosine-coordinated Heme Proteins." Journal of Molecular Biology 368, no. 4 (May 2007): 1122–31. http://dx.doi.org/10.1016/j.jmb.2007.02.079.
Gao, Forson, Amy E. Danson, Fuzhou Ye, Milija Jovanovic, Martin Buck, and Xiaodong Zhang. "Bacterial Enhancer Binding Proteins—AAA+ Proteins in Transcription Activation." Biomolecules 10, no. 3 (February 25, 2020): 351. http://dx.doi.org/10.3390/biom10030351.
Lin, Qing-Peng, Zeng-Qiang Gao, Zhi Geng, Heng Zhang, and Yu-Hui Dong. "Crystal structure of the putative cytoplasmic protein STM0279 (Hcp2) from Salmonella typhimurium." Acta Crystallographica Section F Structural Biology Communications 73, no. 8 (July 26, 2017): 463–68. http://dx.doi.org/10.1107/s2053230x17010512.
JAENICKE, Elmar, and Heinz DECKER. "Tyrosinases from crustaceans form hexamers." Biochemical Journal 371, no. 2 (April 15, 2003): 515–23. http://dx.doi.org/10.1042/bj20021058.
Lu, Connie, Young-un Park, Konstantin Korotkov, Wei Mi, Stewart Turley, Veer Bhatt, Ripal Shah, and Wim Hol. "Multiple approaches towards understanding the type II secretion system." Acta Crystallographica Section A Foundations and Advances 70, a1 (August 5, 2014): C577. http://dx.doi.org/10.1107/s2053273314094224.
Watanabe, Yo-hei, Yosuke Nakazaki, Ryoji Suno, and Masasuke Yoshida. "Stability of the two wings of the coiled-coil domain of ClpB chaperone is critical for its disaggregation activity." Biochemical Journal 421, no. 1 (June 12, 2009): 71–77. http://dx.doi.org/10.1042/bj20082238.
Holler, Nils, Aubry Tardivel, Magdalena Kovacsovics-Bankowski, Sylvie Hertig, Olivier Gaide, Fabio Martinon, Antoine Tinel, et al. "Two Adjacent Trimeric Fas Ligands Are Required for Fas Signaling and Formation of a Death-Inducing Signaling Complex." Molecular and Cellular Biology 23, no. 4 (February 15, 2003): 1428–40. http://dx.doi.org/10.1128/mcb.23.4.1428-1440.2003.
Payá, Gloria, Vanesa Bautista, Sandra Pastor-Soler, Mónica Camacho, Julia Esclapez, and María-José Bonete. "Analysis of Lsm Protein-Mediated Regulation in the Haloarchaeon Haloferax mediterranei." International Journal of Molecular Sciences 25, no. 1 (January 1, 2024): 580. http://dx.doi.org/10.3390/ijms25010580.
Miller, Scott A., Sharon Tollefson, James E. Crowe, John V. Williams, and David W. Wright. "Examination of a Fusogenic Hexameric Core from Human Metapneumovirus and Identification of a Potent Synthetic Peptide Inhibitor from the Heptad Repeat 1 Region." Journal of Virology 81, no. 1 (October 11, 2006): 141–49. http://dx.doi.org/10.1128/jvi.01243-06.
Song, Saemee, Seokho Hong, Jinyang Jang, Ji-Hyun Yeom, Nohra Park, Jaejin Lee, Yeri Lim, et al. "Functional implications of hexameric assembly of RraA proteins from Vibrio vulnificus." PLOS ONE 12, no. 12 (December 20, 2017): e0190064. http://dx.doi.org/10.1371/journal.pone.0190064.
Gres, Anna, Karen Kirby, Atsuko Hachiya, Eleftherios Michailidis, Owen Pornillos, Wataru Sugiura, KyeongEun Lee, Vineet KewalRamani, John Tanner, and Stefan Sarafianos. "Native Hexameric Full-Length HIV-1 Capsid: Crystal Structure and Drug Targeting." Acta Crystallographica Section A Foundations and Advances 70, a1 (August 5, 2014): C696. http://dx.doi.org/10.1107/s2053273314093036.
Song, Saemee, Seokho Hong, Jinyang Jang, Ji-Hyun Yeom, Nohra Park, Jaejin Lee, Yeri Lim, et al. "Correction: Functional implications of hexameric assembly of RraA proteins from Vibrio vulnificus." PLOS ONE 13, no. 1 (January 19, 2018): e0191775. http://dx.doi.org/10.1371/journal.pone.0191775.
Wu, Ling, Sidharth S. Madhavan, Christopher Tan, and Bin Xu. "Hexameric Aggregation Nucleation Core Sequences and Diversity of Pathogenic Tau Strains." Pathogens 11, no. 12 (December 19, 2022): 1559. http://dx.doi.org/10.3390/pathogens11121559.
Castanzo, Dominic T., Benjamin LaFrance, and Andreas Martin. "The AAA+ ATPase Msp1 is a processive protein translocase with robust unfoldase activity." Proceedings of the National Academy of Sciences 117, no. 26 (June 15, 2020): 14970–77. http://dx.doi.org/10.1073/pnas.1920109117.
Lekontceva, Natalia, Alisa Mikhailina, Svetlana Tishchenko, and Alexey Nikulin. "Comparison of the uridine-binding site of hexameric and heptameric archaeal Lsm proteins." Acta Crystallographica Section A Foundations and Advances 74, a2 (August 22, 2018): e201-e201. http://dx.doi.org/10.1107/s2053273318092148.
Hong, Lu, Bodhi P. Vani, Erik H. Thiede, Michael J. Rust, and Aaron R. Dinner. "Molecular dynamics simulations of nucleotide release from the circadian clock protein KaiC reveal atomic-resolution functional insights." Proceedings of the National Academy of Sciences 115, no. 49 (November 15, 2018): E11475—E11484. http://dx.doi.org/10.1073/pnas.1812555115.
Sugimoto, Shinya, Hiroyuki Yoshida, Yoshimitsu Mizunoe, Keigo Tsuruno, Jiro Nakayama, and Kenji Sonomoto. "Structural and Functional Conversion of Molecular Chaperone ClpB from the Gram-Positive Halophilic Lactic Acid Bacterium Tetragenococcus halophilus Mediated by ATP and Stress." Journal of Bacteriology 188, no. 23 (September 22, 2006): 8070–78. http://dx.doi.org/10.1128/jb.00404-06.
Müller, Daniel, Inga Benz, Damini Tapadar, Christian Buddenborg, Lilo Greune, and M. Alexander Schmidt. "Arrangement of the Translocator of the Autotransporter Adhesin Involved in Diffuse Adherence on the Bacterial Surface." Infection and Immunity 73, no. 7 (July 2005): 3851–59. http://dx.doi.org/10.1128/iai.73.7.3851-3859.2005.
Sakwe, Amos M., Tin Nguyen, Vicki Athanasopoulos, Kathy Shire, and Lori Frappier. "Identification and Characterization of a Novel Component of the Human Minichromosome Maintenance Complex." Molecular and Cellular Biology 27, no. 8 (February 12, 2007): 3044–55. http://dx.doi.org/10.1128/mcb.02384-06.
Lu, Jinghua, Kristopher Marjon, Lorraine Marnell, Carolyn Mold, Terry Du Clos, and Peter Sun. "The Structure and Function of Acute Phase Proteins: C-Reactive Protein and Serum Amyloid A in Innate Immunity (110.21)." Journal of Immunology 186, no. 1_Supplement (April 1, 2011): 110.21. http://dx.doi.org/10.4049/jimmunol.186.supp.110.21.
Stoeva, Stanka, Krassimira Idakieva, Dessislava Nikolova Georgieva, Wolfgang Voelter, and Nicolay Genov. "Penaeus monodon (Tiger Shrimp) Hemocyanin: Subunit Composition and Thermostability." Zeitschrift für Naturforschung C 56, no. 5-6 (June 1, 2001): 416–22. http://dx.doi.org/10.1515/znc-2001-5-616.
Dreveny, I., V. E. Pye, F. Beuron, L. C. Briggs, R. L. Isaacson, S. J. Matthews, C. McKeown, X. Yuan, X. Zhang, and P. S. Freemont. "p97 and close encounters of every kind: a brief review." Biochemical Society Transactions 32, no. 5 (October 26, 2004): 715–20. http://dx.doi.org/10.1042/bst0320715.
Jewett, Travis J., and L. David Sibley. "The Toxoplasma Proteins MIC2 and M2AP Form a Hexameric Complex Necessary for Intracellular Survival." Journal of Biological Chemistry 279, no. 10 (December 10, 2003): 9362–69. http://dx.doi.org/10.1074/jbc.m312590200.
Ovejero, César A., Silvia A. González, and José L. Affranchino. "The Conserved Tyr176/Leu177 Motif in the α-Helix 9 of the Feline Immunodeficiency Virus Capsid Protein Is Critical for Gag Particle Assembly." Viruses 11, no. 9 (September 4, 2019): 816. http://dx.doi.org/10.3390/v11090816.
Onwubiko, Nichodemus O., Angela Borst, Suraya A. Diaz, Katharina Passkowski, Felicia Scheffel, Ingrid Tessmer, and Heinz P. Nasheuer. "SV40 T antigen interactions with ssDNA and replication protein A: a regulatory role of T antigen monomers in lagging strand DNA replication." Nucleic Acids Research 48, no. 7 (March 4, 2020): 3657–77. http://dx.doi.org/10.1093/nar/gkaa138.
Baker, Michael J., Chaille T. Webb, David A. Stroud, Catherine S. Palmer, Ann E. Frazier, Bernard Guiard, Agnieszka Chacinska, Jacqueline M. Gulbis, and Michael T. Ryan. "Structural and Functional Requirements for Activity of the Tim9–Tim10 Complex in Mitochondrial Protein Import." Molecular Biology of the Cell 20, no. 3 (February 2009): 769–79. http://dx.doi.org/10.1091/mbc.e08-09-0903.
Drennan, Amanda C., Shivaani Krishna, Mark A. Seeger, Michael P. Andreas, Jennifer M. Gardner, Emily K. R. Sether, Sue L. Jaspersen, and Ivan Rayment. "Structure and function of Spc42 coiled-coils in yeast centrosome assembly and duplication." Molecular Biology of the Cell 30, no. 12 (June 2019): 1505–22. http://dx.doi.org/10.1091/mbc.e19-03-0167.
Blok, Neil B., Dongyan Tan, Ray Yu-Ruei Wang, Pawel A. Penczek, David Baker, Frank DiMaio, Tom A. Rapoport, and Thomas Walz. "Unique double-ring structure of the peroxisomal Pex1/Pex6 ATPase complex revealed by cryo-electron microscopy." Proceedings of the National Academy of Sciences 112, no. 30 (July 13, 2015): E4017—E4025. http://dx.doi.org/10.1073/pnas.1500257112.
Bochman, Matthew L., Stephen P. Bell, and Anthony Schwacha. "Subunit Organization of Mcm2-7 and the Unequal Role of Active Sites in ATP Hydrolysis and Viability." Molecular and Cellular Biology 28, no. 19 (July 28, 2008): 5865–73. http://dx.doi.org/10.1128/mcb.00161-08.
Wheeler, Diana E., Irina Tuchinskaya, Norman A. Buck, and Bruce E. Tabashnik. "Hexameric storage proteins during metamorphosis and egg production in the diamondback moth, Plutella xylostella (Lepidoptera)." Journal of Insect Physiology 46, no. 6 (June 2000): 951–58. http://dx.doi.org/10.1016/s0022-1910(99)00202-4.
Dodge, Greg J., Ashay Patel, Kara L. Jaremko, J. Andrew McCammon, Janet L. Smith, and Michael D. Burkart. "Structural and dynamical rationale for fatty acid unsaturation inEscherichia coli." Proceedings of the National Academy of Sciences 116, no. 14 (March 14, 2019): 6775–83. http://dx.doi.org/10.1073/pnas.1818686116.
Sweeny, Elizabeth A., Amber Tariq, Esin Gurpinar, Michelle S. Go, Matthew A. Sochor, Zhong-Yuan Kan, Leland Mayne, S. Walter Englander, and James Shorter. "Structural and mechanistic insights into Hsp104 function revealed by synchrotron X-ray footprinting." Journal of Biological Chemistry 295, no. 6 (December 27, 2019): 1517–38. http://dx.doi.org/10.1074/jbc.ra119.011577.
Auerbach, Marcy R., Kristy R. Brown, Artem Kaplan, Denise de Las Nueces, and Ila R. Singh. "A Small Loop in the Capsid Protein of Moloney Murine Leukemia Virus Controls Assembly of Spherical Cores." Journal of Virology 80, no. 6 (March 15, 2006): 2884–93. http://dx.doi.org/10.1128/jvi.80.6.2884-2893.2006.
Varikoti, Rohith Anand, Hewafonsekage Yasan Y. Fonseka, Maria S. Kelly, Alex Javidi, Mangesh Damre, Sarah Mullen, Jimmie L. Nugent, Christopher M. Gonzales, George Stan, and Ruxandra I. Dima. "Exploring the Effect of Mechanical Anisotropy of Protein Structures in the Unfoldase Mechanism of AAA+ Molecular Machines." Nanomaterials 12, no. 11 (May 28, 2022): 1849. http://dx.doi.org/10.3390/nano12111849.
Zuromski, Kristin L., Robert T. Sauer, and Tania A. Baker. "Modular and coordinated activity of AAA+ active sites in the double-ring ClpA unfoldase of the ClpAP protease." Proceedings of the National Academy of Sciences 117, no. 41 (October 5, 2020): 25455–63. http://dx.doi.org/10.1073/pnas.2014407117.