Journal articles on the topic 'Haplotypes'
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Pegueroles, Cinta, Verónica Mixão, Laia Carreté, Manu Molina, and Toni Gabaldón. "HaploTypo: a variant-calling pipeline for phased genomes." Bioinformatics 36, no. 8 (December 13, 2019): 2569–71. http://dx.doi.org/10.1093/bioinformatics/btz933.
Full textLi, Ruidong, Han Qu, Jinfeng Chen, Shibo Wang, John M. Chater, Le Zhang, Julong Wei, et al. "Inference of Chromosome-Length Haplotypes Using Genomic Data of Three or a Few More Single Gametes." Molecular Biology and Evolution 37, no. 12 (July 15, 2020): 3684–98. http://dx.doi.org/10.1093/molbev/msaa176.
Full textKaufman, Letícia, Francisco R. Carnese, Alicia Goicoechea, Cristina Dejean, Francisco M. Salzano, and Mara H. Hutz. "Beta-globin gene cluster haplotypes in the Mapuche Indians of Argentina." Genetics and Molecular Biology 21, no. 4 (December 1998): 435–37. http://dx.doi.org/10.1590/s1415-47571998000400003.
Full textKesik, Harun Kaya, Figen Celik, Seyma Gunyakti Kilinc, Sami Simsek, Haroon Ahmed, Yujuan Shen, and Jianping Cao. "Genetic Diversity and Haplotype Analysis of Cattle Hydatid Cyst Isolates Using Mitochondrial Markers in Turkey." Pathogens 11, no. 5 (April 28, 2022): 519. http://dx.doi.org/10.3390/pathogens11050519.
Full textRoberts, Amity R., Louise H. Appleton, Adrian Cortes, Matteo Vecellio, Jonathan Lau, Laura Watts, Matthew A. Brown, and Paul Wordsworth. "ERAP1 association with ankylosing spondylitis is attributable to common genotypes rather than rare haplotype combinations." Proceedings of the National Academy of Sciences 114, no. 3 (January 3, 2017): 558–61. http://dx.doi.org/10.1073/pnas.1618856114.
Full textSugiura, Nami, Dingqin Tang, Hiroyuki Kurokochi, Yoko Saito, and Yuji Ide. "Genetic structure of Quercus gilva Blume in Japan as revealed by chloroplast DNA sequences." Botany 93, no. 12 (December 2015): 873–80. http://dx.doi.org/10.1139/cjb-2015-0025.
Full textVathipadiekal, Vinod, Abdulrahman Alsultan, John Farrell, A. M. Al-Rubaish, Fahad Al-Muhanna, Z. Naserullah, A. Alsuliman, et al. "Polymorphisms Associated with the Arab-Indian Haplotype of Sickle Cell Anemia Are Candidate Fetal Hemoglobin Gene Modulators." Blood 126, no. 23 (December 3, 2015): 3388. http://dx.doi.org/10.1182/blood.v126.23.3388.3388.
Full textPatel, Suprava, Rachita Nanda, Nighat Hussain, Eli Mohapatra, and Pradeep Kumar Patra. "Interactions of Combined Haplotypes of Methylenetetrahydrofolate Reductase on Clinical Events in Children with Sickle Cell Disorder." Journal of Evolution of Medical and Dental Sciences 10, no. 25 (June 21, 2021): 1889–94. http://dx.doi.org/10.14260/jemds/2021/390.
Full textVadva, Larsen, Propp, Trautwein, Alford, and Alper. "A New Pedigree-Based SNP Haplotype Method for Genomic Polymorphism and Genetic Studies." Cells 8, no. 8 (August 5, 2019): 835. http://dx.doi.org/10.3390/cells8080835.
Full textSlade, D., Ž. Škvorc, D. Ballian, J. Gračan, and D. Papes. "The Chloroplast DNA Polymorphisms of White Oaks of Section Quercus in The Central Balkans." Silvae Genetica 57, no. 1-6 (December 1, 2008): 227–34. http://dx.doi.org/10.1515/sg-2008-0035.
Full textChoi, Mun-Ho, Seung-Ho Kang, and Hyeong-Seok Lim. "An improved preprocessing algorithm for haplotype inference by pure parsimony." Journal of Bioinformatics and Computational Biology 12, no. 04 (August 2014): 1450020. http://dx.doi.org/10.1142/s0219720014500206.
Full textEpifanio, John M., Bonnie L. Brown, Peter E. Smouse, and Carol J. Kobak. "Mitochondrial DNA divergence among popylations of American shad (Alosa sapidissima): how much variation is enough for mixed-stock analysis?" Canadian Journal of Fisheries and Aquatic Sciences 52, no. 8 (August 1, 1995): 1688–702. http://dx.doi.org/10.1139/f95-761.
Full textErhart, M. A., S. J. Phillips, F. Bonhomme, P. Boursot, E. K. Wakeland, and J. H. Nadeau. "Haplotypes that are mosaic for wild-type and t complex-specific alleles in wild mice." Genetics 123, no. 2 (October 1, 1989): 405–15. http://dx.doi.org/10.1093/genetics/123.2.405.
Full textXiong, Bai, and Thomas D. Kocher. "Intraspecific variation in sibling species of Simulium venustum and Simulium verecundum complexes (Diptera: Simuliidae) revealed by the sequence of the mitochondrial 16S rRNAgene." Canadian Journal of Zoology 71, no. 6 (June 1, 1993): 1202–6. http://dx.doi.org/10.1139/z93-164.
Full textSebastiani, Paola, John J. Farrell, Shuai Wang, Heather L. Edward, Heather M. Shappell, Harold T. Bae, Clinton T. Baldwin, et al. "BCL11A enhancer Haplotypes Are Associated with the Distribution of HbF in Arab-Indian and African Haplotype Sickle Cell Anemia but Not the Different Population Levels of HbF." Blood 124, no. 21 (December 6, 2014): 4066. http://dx.doi.org/10.1182/blood.v124.21.4066.4066.
Full textAnantaphruti, Malinee, Urusa Thaenkham, Teera Kusolsuk, Wanna Maipanich, Surapol Saguankiat, Somjit Pubampen, and Orawan Phuphisut. "Genetic Variation and Population Genetics ofTaenia saginatain North and Northeast Thailand in relation toTaenia asiatica." Journal of Parasitology Research 2013 (2013): 1–9. http://dx.doi.org/10.1155/2013/310605.
Full textDamen, Manon, Mascha Schijvenaars, Marlies Schimmel-Naber, Johanne Groothuismink, Marieke Coenen, and Alide Tieleman. "Ancestral Origin of the First Indian Families with Myotonic Dystrophy Type 2." Journal of Neuromuscular Diseases 8, no. 4 (July 30, 2021): 715–22. http://dx.doi.org/10.3233/jnd-210671.
Full textKoks, Sulev, Abigail L. Pfaff, Vivien J. Bubb, and John P. Quinn. "Transcript Variants of Genes Involved in Neurodegeneration Are Differentially Regulated by the APOE and MAPT Haplotypes." Genes 12, no. 3 (March 15, 2021): 423. http://dx.doi.org/10.3390/genes12030423.
Full textMoya, Andrés, Eladio Barrio, David Martínez, Amparo Latorre, Fernando González-Candelas, Misericordia Ramón, and José A. Castro. "Molecular characterization and cytonuclear disequilibria of two Drosophila subobscura mitochondrial haplotypes." Genome 36, no. 5 (October 1, 1993): 890–98. http://dx.doi.org/10.1139/g93-117.
Full textNagarajan-Radha, Venkatesh, Ian Aitkenhead, David J. Clancy, Steven L. Chown, and Damian K. Dowling. "Sex-specific effects of mitochondrial haplotype on metabolic rate in Drosophila melanogaster support predictions of the Mother's Curse hypothesis." Philosophical Transactions of the Royal Society B: Biological Sciences 375, no. 1790 (December 2, 2019): 20190178. http://dx.doi.org/10.1098/rstb.2019.0178.
Full textDOD, BARBARA, CATHY LITEL, PATRICK MAKOUNDOU, ANNIE ORTH, and PIERRE BOURSOT. "Identification and characterization of t haplotypes in wild mice populations using molecular markers." Genetical Research 81, no. 2 (April 2003): 103–14. http://dx.doi.org/10.1017/s0016672303006116.
Full textPadutov, Vladimir E. "THE INFLUENCE OF ENVIRONMENTAL FACTORS ON THE POPULATION GENETIC STRUCTURE OF THE PEDUNCULATE OAK (QUERCUS ROBUR L.) IN BELARUS." Journal of the Belarusian State University. Ecology., no. 3 (September 25, 2021): 18–26. http://dx.doi.org/10.46646/2521-683x/2021-3-18-26.
Full textAdabale, Abosede, Samira Batista Lobo Makanjuola, Akinsegun Akinbami, Adedoyin Dosunmu, Alani Akanmu, Farideh A. Javid, and Louis C. Ajonuma. "Frequency of beta S globin gene haplotypes among sickle cell patients in Nigeria." Journal of International Medical Research 49, no. 6 (June 2021): 030006052110199. http://dx.doi.org/10.1177/03000605211019918.
Full textCai, Dehan, and Yanni Sun. "Reconstructing viral haplotypes using long reads." Bioinformatics 38, no. 8 (February 14, 2022): 2127–34. http://dx.doi.org/10.1093/bioinformatics/btac089.
Full textCao, Chang-Chang, and Xiao Sun. "Ehapp2: Estimate haplotype frequencies from pooled sequencing data with prior database information." Journal of Bioinformatics and Computational Biology 14, no. 04 (August 2016): 1650017. http://dx.doi.org/10.1142/s0219720016500177.
Full textAgúndez, José A. G., Klaus Golka, Carmen Martínez, Silvia Selinski, Meinolf Blaszkewicz, and Elena García-Martín. "Unraveling Ambiguous NAT2 Genotyping Data." Clinical Chemistry 54, no. 8 (August 1, 2008): 1390–94. http://dx.doi.org/10.1373/clinchem.2008.105569.
Full textABAD-GRAU, MARÍA M., NURIA MEDINA-MEDINA, SERAFÍN MORAL, ROSANA MONTES-SOLDADO, SERGIO TORRES-SÁNCHEZ, and FUENCISLA MATESANZ. "INCREASING POWER BY USING HAPLOTYPE SIMILARITY IN A MULTIMARKER TRANSMISSION/DISEQUILIBRIUM TEST." Journal of Bioinformatics and Computational Biology 11, no. 02 (April 2013): 1250014. http://dx.doi.org/10.1142/s021972001250014x.
Full textGariepy, Tara D., Dmitry L. Musolin, Aleksandra Konjević, Natalia N. Karpun, Vilena Y. Zakharchenko, Elena N. Zhuravleva, Luciana Tavella, Allison Bruin, and Tim Haye. "Diversity and distribution of cytochrome oxidase I (COI) haplotypes of the brown marmorated stink bug, Halyomorpha halys Stål (Hemiptera, Pentatomidae), along the eastern front of its invasive range in Eurasia." NeoBiota 68 (September 15, 2021): 53–77. http://dx.doi.org/10.3897/neobiota.68.68915.
Full textKoseniuk, Anna, and Ewa Słota. "Mitochondrial control region diversity in Polish sheep breeds." Archives Animal Breeding 59, no. 2 (May 30, 2016): 227–33. http://dx.doi.org/10.5194/aab-59-227-2016.
Full textKaul, Noyonika, Prem Lal Kashyap, Sudheer Kumar, Deepti Singh, and Gyanendra Pratap Singh. "Genetic Diversity and Population Structure of Head Blight Disease Causing Fungus Fusarium graminearum in Northern Wheat Belt of India." Journal of Fungi 8, no. 8 (August 5, 2022): 820. http://dx.doi.org/10.3390/jof8080820.
Full textZheng, Meiyun, Jinyu Yan, Lingling Jiang, Zhenzhen Dai, and Xiang Liu. "Association between ANXA5 haplotypes and the risk of recurrent pregnancy loss." Journal of International Medical Research 50, no. 7 (July 2022): 030006052110268. http://dx.doi.org/10.1177/03000605211026809.
Full textAdler, Grazyna, Emir Mahmutbegovic, Izabela Uzar, Mateusz Adler, and Nevena Mahmutbegovic. "Relationship between H1 and H2 haplotypes of the 17q21 inversion and pregnancy loss in Bosnian population: A case - control study." Genetics & Applications 3, no. 3 (December 24, 2019): 33. http://dx.doi.org/10.31383/ga.vol3iss3pp33-37.
Full textVojvodic, Svetlana, Stevan Popovic, and Lana Macukanovic-Golubovic. "Implications of HLA linkage disequilibrium phenomenon in finding unrelated volunteer bone marrow donors." Medical review 60, no. 3-4 (2007): 178–82. http://dx.doi.org/10.2298/mpns0704178v.
Full textMiege, Christine, Véronique Ruffio-Châble, Mikkel H. Schierup, Didier Cabrillac, Christian Dumas, Thierry Gaude, and J. Mark Cock. "Intrahaplotype Polymorphism at the Brassica S Locus." Genetics 159, no. 2 (October 1, 2001): 811–22. http://dx.doi.org/10.1093/genetics/159.2.811.
Full textBudakva, Ye O. "Determination of the genetic structure of pro-maternal pig breeds of Irish selection using mitochondrial DNA markers." Animal Biology 24, no. 2 (June 2022): 3–8. http://dx.doi.org/10.15407/animbiol24.02.003.
Full textHoward, C. A., G. R. Gummere, M. F. Lyon, D. Bennett, and K. Artzt. "Genetic and molecular analysis of the proximal region of the mouse t-complex using new molecular probes and partial t-haplotypes." Genetics 126, no. 4 (December 1, 1990): 1103–14. http://dx.doi.org/10.1093/genetics/126.4.1103.
Full textNejati-Javaremi, Ardeshir, and Charles Smith. "Assigning Linkage Haplotypes From Parent and Progeny Genotypes." Genetics 142, no. 4 (April 1, 1996): 1363–67. http://dx.doi.org/10.1093/genetics/142.4.1363.
Full textKang, Won Sub, Su Kang Kim, and Hae Jeong Park. "Association of the Promoter Haplotype of IFN-γ-Inducible Protein 16 Gene with Schizophrenia in a Korean Population." Psychiatry Investigation 17, no. 2 (February 25, 2020): 140–46. http://dx.doi.org/10.30773/pi.2019.0175.
Full textDahan, Jennifer, Erik J. Wenninger, Brandon D. Thompson, Sahar Eid, Nora Olsen, and Alexander V. Karasev. "Prevalence of ‘CandidatusLiberibacter solanacearum’ Haplotypes in Potato Tubers and Psyllid Vectors in Idaho From 2012 to 2018." Plant Disease 103, no. 10 (October 2019): 2587–91. http://dx.doi.org/10.1094/pdis-11-18-2113-re.
Full textBhattacharyya, Nitai Pada, Priyadarshi Basu, Madhusudan Das, Srimanta Pramanik, Rajat Banerjee, Bidyut Roy, Susanta Roychoudhury, and Partha P. Majumder. "Negligible Male Gene Flow Across Ethnic Boundaries in India, Revealed by Analysis of Y-Chromosomal DNA Polymorphisms." Genome Research 9, no. 8 (August 1, 1999): 711–19. http://dx.doi.org/10.1101/gr.9.8.711.
Full textDomuschiev, I. P., T. L. Kuraeva, A. S. Sergeyev, V. V. Yazdovsky, L. N. Denisov, V. P. Maximova, O. M. Smirnova, and G. A. Romanovskaya. "Analysis of nuclear families with two and more diabetic siblings with insulin dependent condition." Problems of Endocrinology 40, no. 5 (December 15, 1994): 11–13. http://dx.doi.org/10.14341/probl12157.
Full textDimaki, Maria, Anna Hundsdörfer, and Uwe Fritz. "Eastern Mediterranean chameleons (Chamaeleo chamaeleon, Ch. africanus) are distinct." Amphibia-Reptilia 29, no. 4 (2008): 535–40. http://dx.doi.org/10.1163/156853808786230415.
Full textCronin, Matthew A., William J. Spearman, Richard L. Wilmot, John C. Patton, and John W. Bickham. "Mitochondrial DNA Variation in Chinook (Oncorhynchus tshawytscha) and Chum Salmon (O. keta) Detected by Restriction Enzyme Analysis of Polymerase Chain Reaction (PCR) Products." Canadian Journal of Fisheries and Aquatic Sciences 50, no. 4 (April 1, 1993): 708–15. http://dx.doi.org/10.1139/f93-081.
Full textDumaidi, Kamal, Hayah Qaraqe, Amer Al-Jawabreh, Rasmi Abu-Helu, Fekri Samarah, and Hanan Al-Jawabreh. "Genetic diversity, haplotype analysis, and risk factor assessment of hepatitis A virus isolates from the West Bank, Palestine during the period between 2014 and 2016." PLOS ONE 15, no. 12 (December 11, 2020): e0240339. http://dx.doi.org/10.1371/journal.pone.0240339.
Full textSantos, Daniel Wagner C. L., Vania Aparecida Vicente, Vinicius Almir Weiss, G. Sybren de Hoog, Renata R. Gomes, Edith M. M. Batista, Sirlei Garcia Marques, Flávio de Queiroz-Telles, Arnaldo Lopes Colombo, and Conceição de Maria Pedrozo e. Silva de Azevedo. "Chromoblastomycosis in an Endemic Area of Brazil: A Clinical-Epidemiological Analysis and a Worldwide Haplotype Network." Journal of Fungi 6, no. 4 (October 3, 2020): 204. http://dx.doi.org/10.3390/jof6040204.
Full textChen, Wendi, Bin Zhang, Wenjing Ren, Li Chen, Zhiyuan Fang, Limei Yang, Mu Zhuang, Honghao Lv, Yong Wang, and Yangyong Zhang. "An Identification System Targeting the SRK Gene for Selecting S-Haplotypes and Self-Compatible Lines in Cabbage." Plants 11, no. 10 (May 21, 2022): 1372. http://dx.doi.org/10.3390/plants11101372.
Full textEskdale, Joyce, Grant Gallagher, Cor L. Verweij, Vivian Keijsers, Rudi G. J. Westendorp, and Tom W. J. Huizinga. "Interleukin 10 secretion in relation to human IL-10 locus haplotypes." Proceedings of the National Academy of Sciences 95, no. 16 (August 4, 1998): 9465–70. http://dx.doi.org/10.1073/pnas.95.16.9465.
Full textPhillips, D. V., I. Carbone, S. E. Gold, and L. M. Kohn. "Phylogeography and Genotype-Symptom Associations in Early and Late Season Infections of Canola by Sclerotinia sclerotiorum." Phytopathology® 92, no. 7 (July 2002): 785–93. http://dx.doi.org/10.1094/phyto.2002.92.7.785.
Full textShaver, Bradly R., Sergio Marchant, S. Bruce Martin, and Paula Agudelo. "18S rRNA and COI haplotype diversity of Trichodorus obtusus from turfgrass in South Carolina." Nematology 18, no. 1 (2016): 53–65. http://dx.doi.org/10.1163/15685411-00002944.
Full textHurley, C. K., P. Gregersen, N. Steiner, J. Bell, R. Hartzman, G. Nepom, J. Silver, and A. H. Johnson. "Polymorphism of the HLA-D region in American blacks. A DR3 haplotype generated by recombination." Journal of Immunology 140, no. 3 (February 1, 1988): 885–92. http://dx.doi.org/10.4049/jimmunol.140.3.885.
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