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Books on the topic 'Genetic markers; DNA'

Author: Grafiati

Published: 4 June 2021

Last updated: 3 February 2022

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1

NATO Advanced Research Workshop on DNA Polymorphisms as Disease Markers (1990 London, England). DNA polymorphisms as disease markers. New York: Plenum Press, 1991.

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2

Elles, Robert George. Recombinant DNA probes as markers for genetic disease. Manchester: University ofManchester, 1994.

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3

Nelson, Alondra. Genetics and the unsettled past: The collision of DNA, race, and history. New Brunswick, NJ: Rutgers University Press, 2012.

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4

Butler, John M. Improved analysis of DNA short tandem repeats with time-of-flight mass spectrometry. Washington, D.C: U.S. Dept. of Justice, Office of Justice Programs, National Institute of Justice, 2001.

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5

Butler, John M. Improved analysis of DNA short tandem repeats with time-of-flight mass spectrometry: Science and technology research report. Washington, DC: U.S. Dept. of Justice, Office of Justice Programs, National Institute of Justice, 2001.

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6

E, Lindsten Jan, Pettersson Ulf, Nobelstiftelsen, and Alfred Nobel's Björkborn Foundation, eds. Etiology of human disease at the DNA level. New York: Raven Press, 1991.

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7

Klimenko, Irina, Nikolay Kozlov, Sergey Kostenko, Anastasia Shamustakimova, and Yulian Mavlyutov. Identification and certification of forage grasses (meadow clover, alfalfa, sowing and hop) based on DNA markers. ru: Federal Williams Research Center of Forage Production and Agroecology, 2020. http://dx.doi.org/10.33814/978-5-6043194-9-9.

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A technology has been developed for DNA identification and certification of varieties of meadow clover (Trifolium pratense L.), alfalfa (Medicago varia Mart.), Sowing (M. sativa L.) and hop (M. lupuli-na L.) based on molecular analysis with using SSR and SRAP markers. The recommendations contain a description of the sequence of experiments and protocols for DNA typing procedures. The presented methods were developed by the authors on the basis of their own experimental research and using the data available in the literature. A characteristic of informative primers for each marking system is given, a set of DNA identification markers is proposed, and unique molecular genetic formulas of varieties are drawn up as the basis for a reference genetic passport. Methodological recommendations were prepared with the aim of mastering the technology of DNA certification of forage grasses in practice. Designed for managers and specialists of research and control laboratories, can serve as a textbook for students and postgraduates in specialized specialties.

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8

Single nucleotide polymorphisms: Methods and protocols. 2nd ed. New York: Humana, 2009.

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9

DNA barcodes: Methods and protocols. New York: Humana Press, 2012.

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10

Crop breeding: Methods and protocols. New York: Humana Press, 2014.

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11

Eric, Blomme, ed. Genomics in drug discovery and development. Hoboken, N.J: John Wiley, 2008.

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12

Semizarov, Dimitri. Genomics in drug discovery and development. Hoboken, N.J: Wiley, 2009.

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13

International, Strategic Directions. Microarray technology: The next step in genomic and proteomic analysis. Los Angeles: Strategic Directions International, 2001.

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14

Vasil, Indra K., and R. L. Phillips. DNA-based markers in plants. Springer, 2012.

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15

Phillips, R. L. Dna-Based Markers in Plants. Springer, 2010.

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16

L, Phillips Ronald, and Vasil I. K, eds. DNA-based markers in plants. 2nd ed. Dordrecht: Kluwer Academic Publishers, 2001.

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17

L, Phillips Ronald, and Vasil I. K, eds. DNA-based markers in plants. Dordrecht: Kluwer Academic, 1994.

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18

H, Columbus Frank, and Craven Jasper C, eds. DNA research. New York: Nova Science Publishers, 2005.

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19

Batsheva, Bonné-Tamir, and Adam Avinoam, eds. Genetic diversity among Jews: Diseases and markers at the DNA level. New York: Oxford University Press, 1992.

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20

(Editor), D. J. Galton, and G. Assmann (Editor), eds. DNA Polymorphisms as Disease Markers (Nato Science Series: A:). Springer, 1991.

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21

DNA-Based Markers in Plants (Advances in Cellular and Molecular Biology of Plants). 2nd ed. Springer, 2001.

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22

Meyer, Anna. Hunting the Double Helix: How DNA Is Solving Puzzles of the Past. Allen & Unwin Pty., Limited (Australia), 2005.

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23

Slack, Jonathan. 4. Genes as markers. Oxford University Press, 2014. http://dx.doi.org/10.1093/actrade/9780199676507.003.0004.

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‘Genes as markers’ shows that most genetic variation does not affect gene function or activity, but it is still of enormous interest. Notably it enables the identification of individual people, useful in forensics in the form of DNA fingerprinting, the establishment of paternity, and other information about family relationships. It also provides some evidence about the migration of human populations in historic and prehistoric times. Genetic variation has also enabled biologists to examine the thorny issue of human racial differences and establish the degree to which there is any biological basis for perceived race.

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24

Crawford, Michael, and Rohina C. Rubicz. Molecular Genetic Evidence from Contemporary Populations for the Origins of Native North Americans. Edited by Max Friesen and Owen Mason. Oxford University Press, 2016. http://dx.doi.org/10.1093/oxfordhb/9780199766956.013.4.

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An overview of the current molecular genetic evidence for the origins of North American populations is presented, including specific examples from the authors’ work with the Aleutian Island inhabitants. Shared mitochondrial DNA and Y-chromosome DNA markers among Siberians and Native Americans point to a Pleistocene migration from Siberia into the Americas via Beringia. There was likely a later migration from Siberia to Alaska, based on the analysis of whole-genome sequence data from a Greenland Paleoeskimo that clusters this individual with Siberian populations. Coalescence date estimates for Native American mitochondrial DNA and Y-chromosome DNA haplogroups indicate that there was a population expansion approximately 15,000–18,000 that was associated with a pre-Clovis settlement of the Americas and coastal migration, and then a later expansion of circum-Arctic populations. Settlement of the Aleutian Archipelago took place via east-to-west migration of Aleut kin groups, accompanied by a clinal loss in mitochondrial DNA haplotype diversity.

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25

Relethford, John H. Biological Anthropology, Population Genetics, and Race. Edited by Naomi Zack. Oxford University Press, 2017. http://dx.doi.org/10.1093/oxfordhb/9780190236953.013.20.

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Recent developments in molecular genetics have given us much information about DNA markers and a detailed look at evolutionary causes of genetic variation in humans. Patterns of genetic variation within populations and genetic differences among populations is best understood in light of our species’ African origin 200,000 years ago and the subsequent dispersion of human populations throughout the world 70,000 to 100,000 years ago. Although an evolutionary focus on genetic variation using methods from the field of population genetics provides us with considerable insight regarding our history, older ideas based on traditional definitions of biological race have no explanatory value.

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26

Semizarov, Dimitri, and Eric Blomme. Genomics in Drug Discovery and Development. Wiley & Sons, Incorporated, John, 2008.

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27

Popova, Elmira, David Morton, Paul Damien, and Tim Hanson. Paternity testing allowing for uncertain mutation rates. Edited by Anthony O'Hagan and Mike West. Oxford University Press, 2018. http://dx.doi.org/10.1093/oxfordhb/9780198703174.013.8.

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This article discusses the use of probabilistic reasoning to analyse a disputed paternity case, where the DNA genotypes are compatible on all markers but one, allowing for the possibility of mutation, when the mutation rate is itself uncertain. It first describes the construction and Bayesian analysis of a suitable model for paternity testing, taking into account the potentially misleading effect of genetic mutation and allowing for mutation rate uncertainty, before introducing the simplest type of disputed paternity case. It then considers a specific disputed paternity case, in which an apparent exclusion at a single marker could indicate either non-paternity or mutation, as well as the features of the mutation process that need to be accounted for in the analysis. The results of a simple analysis of the specific disputed paternity case are examined and the analysis is set in the broader context of DNA profiling and forensic genetics.

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28

Barcoding Nature. Routledge, 2014.

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29

Ellis, Rebecca, Claire Waterton, and Brian Wynne. Barcoding Nature: Shifting Cultures of Taxonomy in an Age of Biodiversity Loss. Taylor & Francis Group, 2016.

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30

Barcoding Nature. Taylor & Francis Group, 2013.

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31

Human Identification: The Use of DNA Markers (Contemporary Issues in Genetics and Evolution). 9th ed. Springer, 2007.

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32

Forensic DNA Typing, Second Edition: Biology, Technology, and Genetics of STR Markers. Academic Press, 2005.

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33

Butler, John M. Forensic DNA Typing, Second Edition: Biology, Technology, and Genetics of STR Markers. 2nd ed. Academic Press, 2005.

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34

Rapley, Ralph, and Stuart Harbron. Molecular Analysis and Genome Discovery. Wiley & Sons, Incorporated, John, 2005.

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35

Rapley, Ralph, and Stuart Harbron. Molecular Analysis and Genome Discovery. Wiley & Sons, Incorporated, John, 2011.

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36

Ralph, Rapley, and Harbron Stuart, eds. Molecular analysis and genome discovery. Chichester, West Sussex, England: J. Wiley, 2004.

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37

Rapley, Ralph, and Stuart Harbron. Molecular Analysis and Genome Discovery. Wiley & Sons, Incorporated, John, 2011.

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38

Ralph, Rapley, and Harbron Stuart, eds. Molecular analysis and genome discovery. Chichester, West Sussex, England: J. Wiley, 2004.

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39

Rapley, Ralph, and Stuart Harbron. Molecular Analysis and Genome Discovery. Wiley & Sons, Incorporated, John, 2011.

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40

Molecular Analysis and Genome Discovery. Wiley, 2004.

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41

Rapley, Ralph, and Stuart Harbron. Molecular Analysis and Genome Discovery. Wiley & Sons, Incorporated, John, 2010.

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42

(Editor), Ralph Rapley, and Stuart Harbron (Editor), eds. Molecular Analysis and Genome Discovery. Wiley, 2004.

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43

Vermeulen, Roel, Douglas A. Bell, Dean P. Jones, Montserrat Garcia-Closas, Avrum Spira, Teresa W. Wang, Martyn T. Smith, Qing Lan, and Nathaniel Rothman. Application of Biomarkers in Cancer Epidemiology. Oxford University Press, 2017. http://dx.doi.org/10.1093/oso/9780190238667.003.0006.

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Advancements in OMICs are now enabling investigators to explore comprehensively the biological consequences of exogenous and endogenous exposures by detecting molecular signatures of exposure, early signs of adverse biological effects, preclinical disease, and molecularly defined cancer subtypes. These new technologies have proven invaluable for assembling a comprehensive portrait of human exposure, health, and disease. This includes hypothesis-driven biomarkers, as well as platforms that can agnostically analyze entire biologic processes and “compartments,” including the measurement of small molecules (metabolomics), DNA polymorphisms and rarer inherited variants (genomics), methylation and microRNA (epigenomics), chromosome-wide alterations, mRNA (transcriptomics), proteins (proteomics), and the microbiome (microbiomics). Although the implementation of these technologies in epidemiologic studies has already shown great promise, some challenges of particular importance must be addressed. Non-genetic OMIC markers vary over time due to both random variation and physiologic changes. Therefore, there is an urgent need for cohorts to collect repeat biological samples over time.

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44

Pritchett, Lori C. Bovine Marfan syndrome: Characterization of RFLPs in cattle using human genetic marker D15S1. 1992.

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45

Hongtrakul, Vipa. The development and analysis of sequence-based DNA markers in sunflower for DNA fingerprinting and candidate gene analysis. 1997.

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46

Cutter, Asher D. A Primer of Molecular Population Genetics. Oxford University Press, 2019. http://dx.doi.org/10.1093/oso/9780198838944.001.0001.

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The study of molecular population genetics seeks to understand the micro-evolutionary principles underlying DNA sequence variation and change. It addresses such questions as: Why do individuals differ as much as they do in their DNA sequences? What are the genomic signatures of adaptations? How often does natural selection dictate changes to DNA and accumulate as differences between species? How does the ebb and flow in the abundance of individuals over time get marked onto chromosomes to record genetic history? The concepts used to answer such questions also apply to analysis of personal genomics, genome-wide association studies, phylogenetics, landscape and conservation genetics, forensics, molecular anthropology, and selection scans. This Primer of Molecular Population Genetics introduces the bare essentials of the theory and practice of evolutionary analysis through the lens of DNA sequence change in populations. Intended as an introductory text for upper-level undergraduates and junior graduate students, this Primer also provides an accessible entryway for scientists from other areas of biology to appreciate the ideas and practice of molecular population genetics. With the revolutionary advances in genomic data acquisition, understanding molecular population genetics is now a fundamental requirement for today’s life scientists.

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47

Ruth, Laura. The DNA diagnostic business. Business Communications, 2000.

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48

Global markets for nucleic acid probe diagnostic products, 1997-2004. Mission Viejo, CA: InteLab Corp., 1998.

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49

Corporation, InteLab, ed. U.S. markets for nucleic acid probe-based diagnostic products, 1994-2001. Mission Viejo, CA: InteLab Corporation, 1996.

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50

Richard, Rossiter, and Business Communications Co, eds. Labeling and linkage agents for immunoassays and gene probes. Norwalk, CT: Business Communications Co., 1987.

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