Journal articles on the topic 'Gene burden analysis'
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Sadler, Brooke, Charles G. Minard, Gabe Haller, Christina A. Gurnett, Sarah H. O’Brien, Allison Wheeler, Shilpa Jain, et al. "Whole-exome analysis of adolescents with low VWF and heavy menstrual bleeding identifies novel genetic associations." Blood Advances 6, no. 2 (January 17, 2022): 420–28. http://dx.doi.org/10.1182/bloodadvances.2021005118.
Full textWang, Shuangkuai, Yuantao Tong, Hui Zong, Xuewen Xu, M. James C. Crabbe, Ying Wang, and Xiaoyan Zhang. "Multi-Level Analysis and Identification of Tumor Mutational Burden Genes across Cancer Types." Genes 13, no. 2 (February 17, 2022): 365. http://dx.doi.org/10.3390/genes13020365.
Full textJiao, Xiaodong, Xiaochun Zhang, Baodong Qin, Dong Liu, Liang Liu, Jianjiao Ni, Ningyu Zhou, et al. "Tumor mutation burden analysis in a 5,660 cancer patient cohort reveals cancer type-specific mechanisms for high mutation burden." Journal of Clinical Oncology 37, no. 15_suppl (May 20, 2019): 2589. http://dx.doi.org/10.1200/jco.2019.37.15_suppl.2589.
Full textCooper-Knock, Johnathan, Sai Zhang, Kevin P. Kenna, Tobias Moll, John P. Franklin, Samantha Allen, Helia Ghahremani Nezhad, et al. "Rare variant burden analysis within enhancers identifies CAV1 as an ALS risk gene." Cell Reports 34, no. 5 (February 2021): 108730. http://dx.doi.org/10.1016/j.celrep.2021.108730.
Full textCooper-Knock, Johnathan, Sai Zhang, Kevin P. Kenna, Tobias Moll, John P. Franklin, Samantha Allen, Helia Ghahremani Nezhad, et al. "Rare Variant Burden Analysis within Enhancers Identifies CAV1 as an ALS Risk Gene." Cell Reports 33, no. 9 (December 2020): 108456. http://dx.doi.org/10.1016/j.celrep.2020.108456.
Full textSeo, Eun Seop, Eun-jin Lee, Boram Lee, Muheon Shin, Young-Seok Cho, Ju Kyung Hyun, Hee Won Cho, et al. "Metastatic Burden Defines Clinically and Biologically Distinct Subgroups of Stage 4 High-Risk Neuroblastoma." Journal of Clinical Medicine 9, no. 9 (August 24, 2020): 2730. http://dx.doi.org/10.3390/jcm9092730.
Full textFrampton, Matthew, Elena R. Schiff, Nikolas Pontikos, Anthony W. Segal, and Adam P. Levine. "Seqfam: A python package for analysis of Next Generation Sequencing DNA data in families." F1000Research 7 (March 6, 2018): 281. http://dx.doi.org/10.12688/f1000research.13930.1.
Full textTaylor, Jacquelyn Y., Erin B. Ware, Michelle L. Wright, Jennifer A. Smith, and Sharon L. R. Kardia. "Using Genetic Burden Scores for Gene-by-Methylation Interaction Analysis on Metabolic Syndrome in African Americans." Biological Research For Nursing 21, no. 3 (February 19, 2019): 279–85. http://dx.doi.org/10.1177/1099800419828486.
Full textChoi, Sungkyoung, Sungyoung Lee, Yongkang Kim, Heungsun Hwang, and Taesung Park. "HisCoM-GGI: Hierarchical structural component analysis of gene–gene interactions." Journal of Bioinformatics and Computational Biology 16, no. 06 (December 2018): 1840026. http://dx.doi.org/10.1142/s0219720018400267.
Full textTrimarchi, Matteo, Giacomo Bertazzoni, Alessandro Vinciguerra, Celia Pardini, Fabio Simeoni, Davide Cittaro, Mario Bussi, and Dejan Lazarevic. "Gene Expression Analysis in Patients with Cocaine-Induced Midline Destructive Lesions." Medicina 57, no. 9 (August 24, 2021): 861. http://dx.doi.org/10.3390/medicina57090861.
Full textOwada, Yuki, Satoshi Muto, Hironori Takagi, Takuya Inoue, Yuzuru Watanabe, Takumi Yamaura, Mitsuro Fukuhara, et al. "Correlation between mutation burden of tumor and immunological/clinical parameters in considering biomarkers of immune checkpoint inhibitors for non-small cell lung cancer (NSCLC)." Journal of Clinical Oncology 35, no. 15_suppl (May 20, 2017): e23184-e23184. http://dx.doi.org/10.1200/jco.2017.35.15_suppl.e23184.
Full textLee, Sungyoung, Min-Seok Kwon, and Taesung Park. "CARAT-GxG: CUDA-Accelerated Regression Analysis Toolkit for Large-Scale Gene–Gene Interaction with GPU Computing System." Cancer Informatics 13s7 (January 2014): CIN.S16349. http://dx.doi.org/10.4137/cin.s16349.
Full textKurochkin, D. V., I. E. Maslyukova, T. N. Subbotina, A. S. Khazieva, E. V. Vasiliev, M. A. Mikhalev, E. A. Dunaeva, and K. O. Mironov. "Screening of somatic mutations in the JAK2 and CALR genes by high-resolution melting curve analysis." Russian Clinical Laboratory Diagnostics 66, no. 5 (May 23, 2021): 315–20. http://dx.doi.org/10.51620/0869-2084-2021-66-5-315-320.
Full textRavi, Dashnamoorthy, Afshin Beheshti, Kristine Burgess, Athena Kritharis, Ying Chen, Andrew M. Evens, and Biju Parekkadan. "An Analysis of Transcriptomic Burden Identifies Biological Progression Roadmaps for Hematological Malignancies and Solid Tumors." Biomedicines 10, no. 11 (October 27, 2022): 2720. http://dx.doi.org/10.3390/biomedicines10112720.
Full textRampal, Raajit, Fatima Al-Shahrour, Omar Abdel-Wahab, Jay P. Patel, Jean-Philippe Brunel, Craig H. Mermel, Adam J. Bass, et al. "Integrated genomic analysis illustrates the central role of JAK-STAT pathway activation in myeloproliferative neoplasm pathogenesis." Blood 123, no. 22 (May 29, 2014): e123-e133. http://dx.doi.org/10.1182/blood-2014-02-554634.
Full textNyangiri, Oscar A., Sokouri A. Edwige, Mathurin Koffi, Estelle Mewamba, Gustave Simo, Joyce Namulondo, Julius Mulindwa, et al. "Candidate gene family-based and case-control studies of susceptibility to high Schistosoma mansoni worm burden in African children: a protocol." AAS Open Research 4 (December 15, 2021): 36. http://dx.doi.org/10.12688/aasopenres.13203.2.
Full textNyangiri, Oscar A., Sokouri A. Edwige, Mathurin Koffi, Estelle Mewamba, Gustave Simo, Joyce Namulondo, Julius Mulindwa, et al. "Candidate gene family-based and case-control studies of susceptibility to high Schistosoma mansoni worm burden in African children: a protocol." AAS Open Research 4 (June 29, 2021): 36. http://dx.doi.org/10.12688/aasopenres.13203.1.
Full textHancock, Edward J., Guy-Bart Stan, James A. J. Arpino, and Antonis Papachristodoulou. "Simplified mechanistic models of gene regulation for analysis and design." Journal of The Royal Society Interface 12, no. 108 (July 2015): 20150312. http://dx.doi.org/10.1098/rsif.2015.0312.
Full textSadler, Brooke, Charles Minard, Gabe Haller, Christina Gurnett, Sarah H. O'Brien, Allison P. Wheeler, Eric S. Mullins, et al. "Genotype Analysis of Adolescents with Heavy Menstrual Bleeding and Low Von Willebrand Activity - Report of a Multi-Center Study." Blood 136, Supplement 1 (November 5, 2020): 19–20. http://dx.doi.org/10.1182/blood-2020-135886.
Full textCokic, Vladan P., Pascal Mossuz, Jing Han, Milos Diklic, Mirela Budec, Dijana Sefer, Danijela Lekovic, et al. "Microarray and Proteomic Analysis of Myeloproliferative Neoplasms,." Blood 118, no. 21 (November 18, 2011): 3856. http://dx.doi.org/10.1182/blood.v118.21.3856.3856.
Full textHuang, Taobi, Yuan Liang, Huiyun Zhang, Xia Chen, Hui Wei, Weiming Sun, and Yuping Wang. "CSMD1 Mutations Are Associated with Increased Mutational Burden, Favorable Prognosis, and Anti-Tumor Immunity in Gastric Cancer." Genes 12, no. 11 (October 28, 2021): 1715. http://dx.doi.org/10.3390/genes12111715.
Full textLi, Zhenxiang, Jiamao Lin, Lijuan Zhang, Jingchao Li, Yingyun Zhang, Chenglong Zhao, and Haiyong Wang. "Comprehensive analysis of multiple parameters associated with tumor immune microenvironment in ARID1A mutant cancers." Future Oncology 16, no. 29 (October 2020): 2295–306. http://dx.doi.org/10.2217/fon-2020-0243.
Full textLu, Haodong, Qian Liu, Qing Chang, Jinghai Du, Chunying Zhang, Wang Chang, Xin Guo, et al. "Construction and Evaluation of a Tumor Mutation Burden-Related Prognostic Signature for Thyroid Carcinoma." Computational and Mathematical Methods in Medicine 2021 (October 14, 2021): 1–13. http://dx.doi.org/10.1155/2021/1435827.
Full textJia, Yuanyuan, Ning He, Yadong Yang, Yuliang Huang, Xiaoyu Zhang, Zhichao Fu, Xiaohong Xu, Jianjun Cao, and Jianfei Wang. "Tumor mutation burden and immune microenvironment analysis of urothelial carcinoma." Journal of Clinical Oncology 39, no. 6_suppl (February 20, 2021): 494. http://dx.doi.org/10.1200/jco.2021.39.6_suppl.494.
Full textHomeier-Bachmann, Timo, Anne K. Schütz, Sylvia Dreyer, Julien Glanz, Katharina Schaufler, and Franz J. Conraths. "Genomic Analysis of ESBL-Producing E. coli in Wildlife from North-Eastern Germany." Antibiotics 11, no. 2 (January 18, 2022): 123. http://dx.doi.org/10.3390/antibiotics11020123.
Full textBu, Fengxiao, Yuzhou Zhang, Kai Wang, Nicolo Ghiringhelli Borsa, Michael B. Jones, Amanda O. Taylor, Erika Takanami, et al. "Genetic Analysis of 400 Patients Refines Understanding and Implicates a New Gene in Atypical Hemolytic Uremic Syndrome." Journal of the American Society of Nephrology 29, no. 12 (October 30, 2018): 2809–19. http://dx.doi.org/10.1681/asn.2018070759.
Full textHe, Xinwei, Ming Yu, Xuezhong Wang, Jixian Chen, and Xianglin Li. "Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer." Journal of Oncology 2021 (July 22, 2021): 1–6. http://dx.doi.org/10.1155/2021/3374939.
Full textXie, Yihui, Ziqian Xu, Xingyu Mei, and Weimin Shi. "A Necroptosis-Related Gene Signature to Predict the Prognosis of Skin Cutaneous Melanoma." Disease Markers 2022 (November 16, 2022): 1–18. http://dx.doi.org/10.1155/2022/8232024.
Full textShao, Ting, Xiling Jiang, Guochang Bao, Chunsheng Li, and Changgang Guo. "Comprehensive Analysis of the Oncogenic Role of Targeting Protein for Xklp2 (TPX2) in Human Malignancies." Disease Markers 2022 (October 18, 2022): 1–13. http://dx.doi.org/10.1155/2022/7571066.
Full textHwang, William L., Rachel L. Wolfson, Andrzej Niemierko, Karen J. Marcus, Steven G. DuBois, and Daphne Haas-Kogan. "Clinical Impact of Tumor Mutational Burden in Neuroblastoma." JNCI: Journal of the National Cancer Institute 111, no. 7 (October 10, 2018): 695–99. http://dx.doi.org/10.1093/jnci/djy157.
Full textKhvostyk, Viktor. "Hereditary burden in poultry of different species of the Ukrainian gene pool." Scientific Horizons 23, no. 12 (December 29, 2020): 29–35. http://dx.doi.org/10.48077/scihor.23(12).2020.29-35.
Full textWang, Xuehu, Nie Li, Haifeng Guo, Xiaoping Yin, and Yongchang Zheng. "Correlation Analysis of Gene and Radiomic Features in Colorectal Cancer Liver Metastases." Computational and Mathematical Methods in Medicine 2022 (December 24, 2022): 1–13. http://dx.doi.org/10.1155/2022/8559011.
Full textLi, Ning, Ling Li, and Yongshun Chen. "The Identification of Core Gene Expression Signature in Hepatocellular Carcinoma." Oxidative Medicine and Cellular Longevity 2018 (May 27, 2018): 1–15. http://dx.doi.org/10.1155/2018/3478305.
Full textLu, Lin, Peiling Zhang, Xiaofei Cao, and Mingmei Guan. "Prognosis and Characterization of Immune Microenvironment in Head and Neck Squamous Cell Carcinoma through a Pyroptosis-Related Signature." Journal of Oncology 2022 (April 6, 2022): 1–19. http://dx.doi.org/10.1155/2022/1539659.
Full textZhao, Yulan, Ting Huang, and Pintong Huang. "Integrated Analysis of Tumor Mutation Burden and Immune Infiltrates in Hepatocellular Carcinoma." Diagnostics 12, no. 8 (August 8, 2022): 1918. http://dx.doi.org/10.3390/diagnostics12081918.
Full textGuo, Yang, Yu Heng, Hui Chen, Qiang Huang, Chunping Wu, Lei Tao, and Liang Zhou. "Prognostic Values of METTL3 and Its Roles in Tumor Immune Microenvironment in Pan-Cancer." Journal of Clinical Medicine 12, no. 1 (December 25, 2022): 155. http://dx.doi.org/10.3390/jcm12010155.
Full textYang, Jian, Bin Yan, Yajuan Fan, Lihong Yang, Binbin Zhao, Xiaoyan He, Qingyan Ma, et al. "Integrative analysis of transcriptome-wide association study and gene expression profiling identifies candidate genes associated with stroke." PeerJ 7 (July 29, 2019): e7435. http://dx.doi.org/10.7717/peerj.7435.
Full textZhang, Lei, Dahai Hu, Shuchen Huangfu, Jiaxin Zhou, Wei Wang, Shijin Liu, Hui Tang, Jinghua Pan, and Yunlong Pan. "DNA Repair and Replication-Related Gene Signature Based on Tumor Mutation Burden Reveals Prognostic and Immunotherapy Response in Gastric Cancer." Journal of Oncology 2022 (January 11, 2022): 1–17. http://dx.doi.org/10.1155/2022/6469523.
Full textFu, Yue, Guanpingsheng Luo, Brad J. Spellberg, John E. Edwards, and Ashraf S. Ibrahim. "Gene Overexpression/Suppression Analysis of Candidate Virulence Factors of Candida albicans." Eukaryotic Cell 7, no. 3 (January 4, 2008): 483–92. http://dx.doi.org/10.1128/ec.00445-07.
Full textSvishcheva, Gulnara R., Nadezhda M. Belonogova, Irina V. Zorkoltseva, Anatoly V. Kirichenko, and Tatiana I. Axenovich. "Gene-based association tests using GWAS summary statistics." Bioinformatics 35, no. 19 (March 12, 2019): 3701–8. http://dx.doi.org/10.1093/bioinformatics/btz172.
Full textZhou, Jiao, Qiumei Yao, Robert Peter Gale, Jinlan Li, Lingdi Li, Ning Li, Shanshan Chen, and Guorui Ruan. "A Rapid, Sensitive and Specific Method for Quantifying Calr Mutant Allele Burden in Persons with Myeloproliferative Neoplasms." Blood 126, no. 23 (December 3, 2015): 5210. http://dx.doi.org/10.1182/blood.v126.23.5210.5210.
Full textTian, Wen-Juan, Shan-Shan Liu, and Bu-Rong Li. "The Combined Detection of Immune Genes for Predicting the Prognosis of Patients With Non-Small Cell Lung Cancer." Technology in Cancer Research & Treatment 19 (January 1, 2020): 153303382097750. http://dx.doi.org/10.1177/1533033820977504.
Full textLerner, Seth P., Gordon Robertson, Jaegil Kim, Andrew Cherniack, Guangwu Guo, Rehan Akbani, Rupa S. Kanchi, et al. "Comprehensive molecular characterization and analysis of muscle-invasive urothelial carcinomas." Journal of Clinical Oncology 35, no. 15_suppl (May 20, 2017): 4500. http://dx.doi.org/10.1200/jco.2017.35.15_suppl.4500.
Full textDon, Janith, Sara A. Byron, Guangfa Zhang, Tyler Izatt, Jiaming Zhang, Bethany Davis, Bryce Turner, et al. "Abstract A006: Increased germline mutational burden in individuals of African ancestry: Implications for interpretation of tumor mutation burden." Cancer Epidemiology, Biomarkers & Prevention 32, no. 1_Supplement (January 1, 2023): A006. http://dx.doi.org/10.1158/1538-7755.disp22-a006.
Full textFornage, Myriam, Joshua C. Bis, Vincent Chouraki, Li An Lin, Anita DeStefano, Jennifer A. Brody, Donna M. Muzny, et al. "Abstract 148: Whole Exome Sequence Analysis of Cerebral White Matter Hyperintensities on MRI." Stroke 46, suppl_1 (February 2015). http://dx.doi.org/10.1161/str.46.suppl_1.148.
Full textAu, Emily, Barbara Jean M. Waddell, Nicole Acosta, Kristine Du, Maria Bautista Chavarriaga, Janine McCalder, Jennifer Van Doorn, et al. "404. Surveillance of Clostridioides difficile Burden in Hospitals Through Wastewater Analysis." Open Forum Infectious Diseases 9, Supplement_2 (December 1, 2022). http://dx.doi.org/10.1093/ofid/ofac492.482.
Full textWang, Liwei, Fu Chen, Rui Liu, Lei Shi, Guosheng Zhao, and Zhengjian Yan. "Gene expression and immune infiltration in melanoma patients with different mutation burden." BMC Cancer 21, no. 1 (April 9, 2021). http://dx.doi.org/10.1186/s12885-021-08083-1.
Full textLye, Zoe, Jae Young Choi, and Michael D. Purugganan. "Deleterious mutations and the rare allele burden on rice gene expression." Molecular Biology and Evolution, September 8, 2022. http://dx.doi.org/10.1093/molbev/msac193.
Full textMiao, Huikai, Qiannan Ren, Hongmu Li, Mingyue Zeng, Dongni Chen, Chunmei Xu, Youfang Chen, and Zhesheng Wen. "Comprehensive analysis of the autophagy-dependent ferroptosis-related gene FANCD2 in lung adenocarcinoma." BMC Cancer 22, no. 1 (March 2, 2022). http://dx.doi.org/10.1186/s12885-022-09314-9.
Full textLi, Wenjie, Kezhi Zhou, Mengting Li, Qian Hu, Wanhui Wei, Lan Liu, and Qiu Zhao. "Identification of SCN7A as the key gene associated with tumor mutation burden in gastric cancer." BMC Gastroenterology 22, no. 1 (February 5, 2022). http://dx.doi.org/10.1186/s12876-022-02112-4.
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